Carg19973 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAAGAAGACGTCAAACATGAATATCCAGCTGTAAGTGACCAAACAAAAAAAATGAAAGTTTATCAAATTATCAAGATCAAGCGTTCCTCCCTACCATCACCAAACCTGATCGACATTCTTTCGCACGAAGGACACACGACGGCTTTTATTACGCTAATTCTTCCACCCCCAAATTGGCTCACGAAGATACGGACATGGAGGATCTTTGTTTTCAGTACACTCCTTATCTTTCTTGGGATTATACAACTTTCTAGGAGTTCCCAATTGATTTCGCTGAGCATACTTTTGTTGTGGTTTCTCCCTTTCTATTTTCACCATAGATTCGGAAAGACATCGAAAGCGAATTGGGAGATCAATCGCCATAATCAGTACTTAGAGAAGAACAGGCTGCAACACCCTCCGATTATTGCCAGAACCCTAGTTAGCGTCGAGGAAATTCGATCGGCGCCCAACGTTTCTGATTACTACCCGCCTTCTCTTCATGGCGCATTGGTTAGTTCGCCGGAGCCTGATCCTAGAGGTACGCATATTTACGAGAACTCATACATGGGTTTATCAATAGTGGTTGTCACGGATAAGCTTGGTTATATACTACTTATGCCTAATTTTCCATTTATTGCTGGTTGCAAGCCTCTTTCTAATCTTCCTTGA ATGAAGAAGACGTCAAACATGAATATCCAGCTATTCGGAAAGACATCGAAAGCGAATTGGGAGATCAATCGCCATAATCAGTACTTAGAGAAGAACAGGCTGCAACACCCTCCGATTATTGCCAGAACCCTAGTTAGCGTCGAGGAAATTCGATCGGCGCCCAACGTTTCTGATTACTACCCGCCTTCTCTTCATGGCGCATTGGTTAGTTCGCCGGAGCCTGATCCTAGAGGTACGCATATTTACGAGAACTCATACATGGGTTTATCAATAGTGGTTGTCACGGATAAGCTTGGTTATATACTACTTATGCCTAATTTTCCATTTATTGCTGGTTGCAAGCCTCTTTCTAATCTTCCTTGA ATGAAGAAGACGTCAAACATGAATATCCAGCTATTCGGAAAGACATCGAAAGCGAATTGGGAGATCAATCGCCATAATCAGTACTTAGAGAAGAACAGGCTGCAACACCCTCCGATTATTGCCAGAACCCTAGTTAGCGTCGAGGAAATTCGATCGGCGCCCAACGTTTCTGATTACTACCCGCCTTCTCTTCATGGCGCATTGGTTAGTTCGCCGGAGCCTGATCCTAGAGGTACGCATATTTACGAGAACTCATACATGGGTTTATCAATAGTGGTTGTCACGGATAAGCTTGGTTATATACTACTTATGCCTAATTTTCCATTTATTGCTGGTTGCAAGCCTCTTTCTAATCTTCCTTGA MKKTSNMNIQLFGKTSKANWEINRHNQYLEKNRLQHPPIIARTLVSVEEIRSAPNVSDYYPPSLHGALVSSPEPDPRGTHIYENSYMGLSIVVVTDKLGYILLMPNFPFIAGCKPLSNLP
BLAST of Carg19973 vs. NCBI nr
Match: XP_022950703.1 (protein SSUH2 homolog [Cucurbita moschata]) HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Carg19973 vs. NCBI nr
Match: XP_023544518.1 (protein SSUH2 homolog [Cucurbita pepo subsp. pepo]) HSP 1 Score: 83.2 bits (204), Expect = 6.7e-13 Identity = 44/66 (66.67%), Postives = 49/66 (74.24%), Query Frame = 0
BLAST of Carg19973 vs. NCBI nr
Match: XP_022978193.1 (protein SSUH2 homolog [Cucurbita maxima]) HSP 1 Score: 82.8 bits (203), Expect = 8.7e-13 Identity = 44/66 (66.67%), Postives = 48/66 (72.73%), Query Frame = 0
BLAST of Carg19973 vs. NCBI nr
Match: XP_008448954.1 (PREDICTED: protein SSUH2 homolog [Cucumis melo]) HSP 1 Score: 75.5 bits (184), Expect = 1.4e-10 Identity = 42/66 (63.64%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Carg19973 vs. NCBI nr
Match: XP_011653674.1 (PREDICTED: protein SSUH2 homolog isoform X1 [Cucumis sativus] >KGN54347.1 hypothetical protein Csa_4G307890 [Cucumis sativus]) HSP 1 Score: 74.7 bits (182), Expect = 2.4e-10 Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Carg19973 vs. TrEMBL
Match: tr|A0A1S3BKY0|A0A1S3BKY0_CUCME (protein SSUH2 homolog OS=Cucumis melo OX=3656 GN=LOC103490964 PE=4 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 9.2e-11 Identity = 42/66 (63.64%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Carg19973 vs. TrEMBL
Match: tr|A0A0A0L182|A0A0A0L182_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_4G307890 PE=4 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 1.6e-10 Identity = 41/66 (62.12%), Postives = 45/66 (68.18%), Query Frame = 0
BLAST of Carg19973 vs. TrEMBL
Match: tr|I1KK89|I1KK89_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100816518 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06 Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Carg19973 vs. TrEMBL
Match: tr|A0A0B2RAS1|A0A0B2RAS1_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_040216 PE=4 SV=1) HSP 1 Score: 61.2 bits (147), Expect = 1.8e-06 Identity = 31/50 (62.00%), Postives = 35/50 (70.00%), Query Frame = 0
BLAST of Carg19973 vs. TrEMBL
Match: tr|A0A1D1Z712|A0A1D1Z712_9ARAE (Uncharacterized protein C3orf32 (Fragment) OS=Anthurium amnicola OX=1678845 GN=C3orf32 PE=4 SV=1) HSP 1 Score: 60.8 bits (146), Expect = 2.3e-06 Identity = 33/77 (42.86%), Postives = 46/77 (59.74%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |