Carg27485 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCGGTGGTTTGGGGCAAACCACGTAGGTCGGATCAGATCAATGCATGGGTTACAGAGGTCGTGTCTCACTATTCAACTAGAGTCGTGTTGCTCTGCTCAGCATCTGATGCGTTGCTTCAACCAATGAGCGATGCGTGTCCCCTAGTTTGACCTAGACACATTCCTTCTCTAGCCGGTCACCACGTGGCTCGCCAAAAAAATTCCTCTCTCCTCCTAGCACATGAAATGTTGGATTAGGTTTTCTCGAACTTCATTTTTTTTATCTTTCAATTTAGAACTCAAATTAAGACGATTTCTTCAACAAAGACGTAGATCTTAATTTCAACTACGTCCATGCATTTTTTTTTTCTTTAAAATTTTACCCACGTACTGATTTAAGAGTGTTCAAAGTAGGTTTATTCTTTTTCCTTACTGTTCTTGAACAACTCTCGAAGCTCCACTTTTGGATTAGGATTTAAATGATTTTTTCTTTTTTAAAAAAAGAACAACTCAACAACACAACTCAATTTAACCCGAAACTAGAGAGTTAAGGTGGGTTAGTTTGTAAACTCTATTTGAATTACTTCGGTTACCAACTCAACTCAACTTGTATAAACTTCTACTTCCTCGTTCAACTCGTGTCCCAATTTTTTATTCTTTGTATATAATTCTTTTTCATTAACTCTAATCCTAAAATTCACTTTTTATAAGTGTTTAGATTTGCATTACTAGATACAAACGTGTGTTAAATATGCCTTTTAAATAAAATAATAAAATAAACAAACTTTACGAGGACCACAAACCAACGACATGGTCCAAATGTTTTTTTGTTTTTTTTTAATAATTTAACCAAAAAACAAAAAAGACCATACCTCAGCCGTACCAAAAATTTGTTTTTTTTTTTTTTAATTATTTTCTTTTTTACTTTTTTGGTGTAATTTTTTGTGATCTTTTTAATTCAACAAACGAATAATTCCCTTTTACTTAGTTTTAATTTAATCAATAGCTTCACTTCATAAGGTTTTTAATCACATAATCATCCCTACAAATAGCCGTTCATTAGTTTCTGATGCAGCAAGAACACATGGAGCTACCAAAGAAGCCATGGTTGGAGATATTGGAGCAATGCAAAATTGGTTCCTCACCTTCCCCGCCCACACCCTTCTCTCTGCCTCTCACTTACTTCGATCTCAGTTTCTTCTTAAGCCCTCCCACTCAGCGCATTCTCTTCTTACTCCTTACCTCCCCATGAGCTGCTTCACTTCGACTCCATACTCCAAACCCTCAAAACACTCTCTCTCCCATGCCCTCTCCACTTTTCTCCCCCTCGCCGGAAACCTCCTTTGGCCGCCTCAATCCCCGGAGCCCTTTATTTGTTACAACCCTGGCGACTCTCTTTCCCTCACTATTGCCAAAACCCACGCAGATTTCCACCACCTCTCTTCAAATTCATGCCCGGAAGGCAAAGGAATCCCATTTCCTCGTACCCGACCTCCCAACATCCGACACCATTGCTCCAGTCATGTCTCTTCAAATCACTTTGTTCCCCAAATGTGGGTTTTCCATTGGCATCATAACCAACCATGTGGTTTCCGATGCCAAAACATCCACCATGTTCTTGAAATCATGGGCTTCCATTTGTAG ATGGCGGTGGTTTGGGGCAAACCACGTAGGTCGGATCAGATCAATGCATGGGTTACAGAGGTCGTGTCTCACTATTCAACTAGAGTCGTGTTGCTCTGCTCAGCATCTGATGCGTTGCTTCAACCAATGAGCGATGCGTCAAGAACACATGGAGCTACCAAAGAAGCCATGGTTGGAGATATTGGAGCAATGCAAAATTGGTTCCTCACCTTCCCCGCCCACACCCTTCTCTCTGCCTCTCACTTACTTCGATCTCAGTTTCTTCTTAAGCCCTCCCACTCAGCGCATTCTCTTCTTACTCCTTACCTCCCCATGAGCTGCTTCACTTCGACTCCATACTCCAAACCCTCAAAACACTCTCTCTCCCATGCCCTCTCCACTTTTCTCCCCCTCGCCGGAAACCTCCTTTGGCCGCCTCAATCCCCGGAGCCCTTTATTTGTTACAACCCTGGCGACTCTCTTTCCCTCACTATTGCCAAAACCCACGCAGATTTCCACCACCTCTCTTCAAATTCATGCCCGGAAGGCAAAGGAATCCCATTTCCTCGTACCCGACCTCCCAACATCCGACACCATTGCTCCAGTCATGTCTCTTCAAATCACTTTGTTCCCCAAATGTGGGTTTTCCATTGGCATCATAACCAACCATGTGGTTTCCGATGCCAAAACATCCACCATGTTCTTGAAATCATGGGCTTCCATTTGTAG ATGGCGGTGGTTTGGGGCAAACCACGTAGGTCGGATCAGATCAATGCATGGGTTACAGAGGTCGTGTCTCACTATTCAACTAGAGTCGTGTTGCTCTGCTCAGCATCTGATGCGTTGCTTCAACCAATGAGCGATGCGTCAAGAACACATGGAGCTACCAAAGAAGCCATGGTTGGAGATATTGGAGCAATGCAAAATTGGTTCCTCACCTTCCCCGCCCACACCCTTCTCTCTGCCTCTCACTTACTTCGATCTCAGTTTCTTCTTAAGCCCTCCCACTCAGCGCATTCTCTTCTTACTCCTTACCTCCCCATGAGCTGCTTCACTTCGACTCCATACTCCAAACCCTCAAAACACTCTCTCTCCCATGCCCTCTCCACTTTTCTCCCCCTCGCCGGAAACCTCCTTTGGCCGCCTCAATCCCCGGAGCCCTTTATTTGTTACAACCCTGGCGACTCTCTTTCCCTCACTATTGCCAAAACCCACGCAGATTTCCACCACCTCTCTTCAAATTCATGCCCGGAAGGCAAAGGAATCCCATTTCCTCGTACCCGACCTCCCAACATCCGACACCATTGCTCCAGTCATGTCTCTTCAAATCACTTTGTTCCCCAAATGTGGGTTTTCCATTGGCATCATAACCAACCATGTGGTTTCCGATGCCAAAACATCCACCATGTTCTTGAAATCATGGGCTTCCATTTGTAG MAVVWGKPRRSDQINAWVTEVVSHYSTRVVLLCSASDALLQPMSDASRTHGATKEAMVGDIGAMQNWFLTFPAHTLLSASHLLRSQFLLKPSHSAHSLLTPYLPMSCFTSTPYSKPSKHSLSHALSTFLPLAGNLLWPPQSPEPFICYNPGDSLSLTIAKTHADFHHLSSNSCPEGKGIPFPRTRPPNIRHHCSSHVSSNHFVPQMWVFHWHHNQPCGFRCQNIHHVLEIMGFHL
BLAST of Carg27485 vs. NCBI nr
Match: XP_022944412.1 (malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase-like [Cucurbita moschata]) HSP 1 Score: 99.4 bits (246), Expect = 1.8e-17 Identity = 45/60 (75.00%), Postives = 47/60 (78.33%), Query Frame = 0
BLAST of Carg27485 vs. NCBI nr
Match: XP_022944048.1 (malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase-like [Cucurbita moschata]) HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15 Identity = 54/106 (50.94%), Postives = 62/106 (58.49%), Query Frame = 0
BLAST of Carg27485 vs. NCBI nr
Match: XP_022986173.1 (phenolic glucoside malonyltransferase 1-like [Cucurbita maxima]) HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of Carg27485 vs. NCBI nr
Match: XP_022986520.1 (phenolic glucoside malonyltransferase 1-like [Cucurbita maxima]) HSP 1 Score: 92.4 bits (228), Expect = 2.2e-15 Identity = 42/54 (77.78%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of Carg27485 vs. NCBI nr
Match: XP_022986172.1 (malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase-like, partial [Cucurbita maxima]) HSP 1 Score: 91.7 bits (226), Expect = 3.7e-15 Identity = 43/54 (79.63%), Postives = 46/54 (85.19%), Query Frame = 0
BLAST of Carg27485 vs. TAIR10
Match: AT5G39050.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 63.5 bits (153), Expect = 1.9e-10 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Carg27485 vs. TAIR10
Match: AT5G39080.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 60.5 bits (145), Expect = 1.6e-09 Identity = 31/67 (46.27%), Postives = 40/67 (59.70%), Query Frame = 0
BLAST of Carg27485 vs. TAIR10
Match: AT3G29680.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 58.9 bits (141), Expect = 4.8e-09 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Carg27485 vs. TAIR10
Match: AT5G39090.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08 Identity = 24/52 (46.15%), Postives = 38/52 (73.08%), Query Frame = 0
BLAST of Carg27485 vs. TAIR10
Match: AT3G29635.1 (HXXXD-type acyl-transferase family protein) HSP 1 Score: 55.5 bits (132), Expect = 5.3e-08 Identity = 29/60 (48.33%), Postives = 37/60 (61.67%), Query Frame = 0
BLAST of Carg27485 vs. Swiss-Prot
Match: sp|Q940Z5|PMAT1_ARATH (Phenolic glucoside malonyltransferase 1 OS=Arabidopsis thaliana OX=3702 GN=PMAT1 PE=1 SV=1) HSP 1 Score: 63.5 bits (153), Expect = 3.5e-09 Identity = 31/67 (46.27%), Postives = 42/67 (62.69%), Query Frame = 0
BLAST of Carg27485 vs. Swiss-Prot
Match: sp|Q9LRQ7|BAHD2_ARATH (BAHD acyltransferase At3g29680 OS=Arabidopsis thaliana OX=3702 GN=At3g29680 PE=2 SV=1) HSP 1 Score: 58.9 bits (141), Expect = 8.6e-08 Identity = 27/53 (50.94%), Postives = 38/53 (71.70%), Query Frame = 0
BLAST of Carg27485 vs. Swiss-Prot
Match: sp|Q8W1W9|5MAT1_SALSN (Malonyl-coenzyme:anthocyanin 5-O-glucoside-6'''-O-malonyltransferase OS=Salvia splendens OX=180675 GN=5MAT1 PE=1 SV=1) HSP 1 Score: 51.6 bits (122), Expect = 1.4e-05 Identity = 26/55 (47.27%), Postives = 40/55 (72.73%), Query Frame = 0
BLAST of Carg27485 vs. Swiss-Prot
Match: sp|Q9LJB4|5MAT_ARATH (Malonyl-CoA:anthocyanidin 5-O-glucoside-6''-O-malonyltransferase OS=Arabidopsis thaliana OX=3702 GN=5MAT PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.6e-04 Identity = 24/56 (42.86%), Postives = 35/56 (62.50%), Query Frame = 0
BLAST of Carg27485 vs. Swiss-Prot
Match: sp|Q9FNP9|AGCT_ARATH (Agmatine coumaroyltransferase OS=Arabidopsis thaliana OX=3702 GN=ACT PE=1 SV=1) HSP 1 Score: 47.4 bits (111), Expect = 2.6e-04 Identity = 23/52 (44.23%), Postives = 32/52 (61.54%), Query Frame = 0
BLAST of Carg27485 vs. TrEMBL
Match: tr|A0A2P5DK04|A0A2P5DK04_9ROSA (Transferase OS=Trema orientalis OX=63057 GN=TorRG33x02_248870 PE=4 SV=1) HSP 1 Score: 81.3 bits (199), Expect = 3.3e-12 Identity = 43/83 (51.81%), Postives = 52/83 (62.65%), Query Frame = 0
BLAST of Carg27485 vs. TrEMBL
Match: tr|B9H448|B9H448_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G120700v3 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 34/58 (58.62%), Postives = 42/58 (72.41%), Query Frame = 0
BLAST of Carg27485 vs. TrEMBL
Match: tr|A0A2K2ASN8|A0A2K2ASN8_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G103100v3 PE=4 SV=1) HSP 1 Score: 79.0 bits (193), Expect = 1.6e-11 Identity = 35/58 (60.34%), Postives = 43/58 (74.14%), Query Frame = 0
BLAST of Carg27485 vs. TrEMBL
Match: tr|A0A0A0KVT6|A0A0A0KVT6_CUCSA (Acetyltransferase OS=Cucumis sativus OX=3659 GN=Csa5G639480 PE=2 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11 Identity = 39/70 (55.71%), Postives = 47/70 (67.14%), Query Frame = 0
BLAST of Carg27485 vs. TrEMBL
Match: tr|A0A2P5BBP1|A0A2P5BBP1_PARAD (Transferase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_253200 PE=4 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 2.1e-11 Identity = 42/83 (50.60%), Postives = 51/83 (61.45%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|