BLAST of Carg23198 vs. NCBI nr
Match:
XP_022922110.1 (pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] >XP_022922111.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] >XP_022922112.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] >XP_022922113.1 pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata])
HSP 1 Score: 949.9 bits (2454), Expect = 4.0e-273
Identity = 527/529 (99.62%), Postives = 527/529 (99.62%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF
Sbjct: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYL LIDQGLFANNYTFPPLIKAC
Sbjct: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLDLIDQGLFANNYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW
Sbjct: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K
Sbjct: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV
Sbjct: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV
Sbjct: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA
Sbjct: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS
Sbjct: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 530
KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ
Sbjct: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 529
BLAST of Carg23198 vs. NCBI nr
Match:
XP_023549650.1 (pentatricopeptide repeat-containing protein At5g06540-like [Cucurbita pepo subsp. pepo] >XP_023549651.1 pentatricopeptide repeat-containing protein At5g06540-like [Cucurbita pepo subsp. pepo] >XP_023549652.1 pentatricopeptide repeat-containing protein At5g06540-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 936.8 bits (2420), Expect = 3.5e-269
Identity = 522/529 (98.68%), Postives = 524/529 (99.05%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF
Sbjct: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYL LIDQGLFANNYTFPPLIKA
Sbjct: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLDLIDQGLFANNYTFPPLIKAS 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW
Sbjct: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K
Sbjct: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESN ILATALVDMYSKCGYIESALAV
Sbjct: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNLILATALVDMYSKCGYIESALAV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGI NKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
DTGLK+FDQMYTVYGV+PQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA
Sbjct: 361 DTGLKLFDQMYTVYGVQPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS
Sbjct: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 530
KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ
Sbjct: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 529
BLAST of Carg23198 vs. NCBI nr
Match:
XP_022970147.1 (pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima] >XP_022970148.1 pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima] >XP_022970149.1 pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima] >XP_022970150.1 pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima])
HSP 1 Score: 935.3 bits (2416), Expect = 1.0e-268
Identity = 518/529 (97.92%), Postives = 523/529 (98.87%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIHKSFKDAI PLI+KSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF
Sbjct: 1 MIHKSFKDAIVPLINKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYL L+DQGLFANNYTFPPLIKAC
Sbjct: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLDLVDQGLFANNYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLK ARVLFDKSSVKDVVVW
Sbjct: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKTARVLFDKSSVKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
TAMVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX K
Sbjct: 181 TAMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV
Sbjct: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGIPNKDAGAWNAMISGVAMNGDVTKSL+LFDKMILNGTQATETTFVAVLAACTHAKMV
Sbjct: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLKLFDKMILNGTQATETTFVAVLAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
DTGLK+FDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKM GFSNVDANVWGA
Sbjct: 361 DTGLKLFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMEGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
MLGACRKYGNIEVGNRIW+KLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS
Sbjct: 421 MLGACRKYGNIEVGNRIWKKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 530
KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ
Sbjct: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 529
BLAST of Carg23198 vs. NCBI nr
Match:
XP_022154784.1 (pentatricopeptide repeat-containing protein At5g66520-like [Momordica charantia])
HSP 1 Score: 828.6 bits (2139), Expect = 1.4e-236
Identity = 462/529 (87.33%), Postives = 492/529 (93.01%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MI K+FKD I PL++KSKSLQHLK+IH HLLKTHLPE+PY APLLAVAATSGD+ GS F
Sbjct: 1 MIPKTFKDTIVPLLNKSKSLQHLKQIHAHLLKTHLPENPYAXAPLLAVAATSGDDSGSLF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYACAIF+NLR RNTFMYNSMIRGYVLSR+P QAILCYL LI+ GL ANNYTF PLIKAC
Sbjct: 61 SYACAIFENLRQRNTFMYNSMIRGYVLSRSPIQAILCYLDLINHGLLANNYTFQPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVY +LKR G LVHAHVIVLGYENDPFVVSTLVEFYSL+DLK+AR LFDKSSVKDVVVW
Sbjct: 121 ALVYHDLKRTGNLVHAHVIVLGYENDPFVVSTLVEFYSLVDLKIARQLFDKSSVKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
TAMVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK
Sbjct: 181 TAMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PNES+ VSVLTACAHLGAITQG+WMHSYAKR+R ESNPILATALVDMYSKCGYI+SAL+V
Sbjct: 241 PNESVVVSVLTACAHLGAITQGVWMHSYAKRYRLESNPILATALVDMYSKCGYIKSALSV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
F+GI NKDAGAWNAMISGVAMNGDV KSLELFD+M++ GT ATETTFVA+L ACTHAKMV
Sbjct: 301 FDGISNKDAGAWNAMISGVAMNGDVKKSLELFDEMVIKGTNATETTFVAILTACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
D GLK+FDQMYTVYGV PQ EH+ACVVDLMARAGMVEDAE FIE+KMGGFS VDANVWGA
Sbjct: 361 DRGLKLFDQMYTVYGVWPQLEHFACVVDLMARAGMVEDAERFIEEKMGGFSKVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
+LGACRKYGNIE GNRIWRKL AMG++DCGTQVLSYNIYAEAGWEMAAKEVRK +E R
Sbjct: 421 VLGACRKYGNIEAGNRIWRKLSAMGISDCGTQVLSYNIYAEAGWEMAAKEVRKFFAEARM 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETLGQ 530
KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLS+MVKWETLGQ
Sbjct: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSKMVKWETLGQ 529
BLAST of Carg23198 vs. NCBI nr
Match:
XP_008437067.1 (PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1 [Cucumis melo])
HSP 1 Score: 776.9 bits (2005), Expect = 4.7e-221
Identity = 437/527 (82.92%), Postives = 476/527 (90.32%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIH++F DAI+PL+ K KS+QHLK+IH HLLKT+LP++PY ++PLL VAATSG + SFF
Sbjct: 1 MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYAC IFKNL+ RN FMYNSMIRGY LSR PKQAILCYL LID G AN YTFPPLIKAC
Sbjct: 61 SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVY ELKR+GYLVHAHV+VLGYEND FVVS LVEFYSL DLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
T MVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK
Sbjct: 181 TVMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PN+S+ VSVLTACAHLGAITQGLWMHSYAKR+ ++NPILATALVDMYSKCGYIESAL V
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGI NKDAGAWNAMISGVAM GDV KSLELFDKMI +GTQATE TFV++LAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
+ GL++FDQMY VY V+PQFEHYACVVDLMARAGMVEDAE+F+E+KMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
+L ACRKY NIE+G+RIW KL A+GV D GTQVLSYNI++EAG EMAAKEVRK SE RS
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETL 528
KK PGCSV+EVDGAVQEFLAGDLSHPQVQ ICEMLG LS+MVKWET+
Sbjct: 481 KKIPGCSVIEVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETV 527
BLAST of Carg23198 vs. TAIR10
Match:
AT5G48910.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 285.4 bits (729), Expect = 7.8e-77
Identity = 206/533 (38.65%), Postives = 307/533 (57.60%), Query Frame = 0
Query: 5 SFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYAC 64
S ++ P I+ ++++ L +IH +K+ A +L ATS D YA
Sbjct: 21 SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATS-DLHHRDLDYAH 80
Query: 65 AIFKNLRHRNTFMYNSMIRGYVLSRAPKQAI---LCYLALIDQGLFANNYTFPPLIKACA 124
IF + RN F +N++IRG+ S K I L Y + D+ + N +TFP ++KACA
Sbjct: 81 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140
Query: 125 LVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSSVK----- 184
+ + G +H + G+ D FV+S LV Y + +K ARVLF K+ ++
Sbjct: 141 --KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 200
Query: 185 ---------DVVVWTAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
++V+W M+DGY ++ XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 201 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXX 260
Query: 245 XXXXXXXXXXXXXKPNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVD 304
XXXXXXXXXX +PN VSVL A + LG++ G W+H YA+ + +L +AL+D
Sbjct: 261 XXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 320
Query: 305 MYSKCGYIESALAVFEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETT 364
MYSKCG IE A+ VFE +P ++ W+AMI+G A++G +++ F KM G + ++
Sbjct: 321 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 380
Query: 365 FVAVLAACTHAKMVDTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKK 424
++ +L AC+H +V+ G + F QM +V G+ P+ EHY C+VDL+ R+G++++AEEFI
Sbjct: 381 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI--- 440
Query: 425 MGGFSNVDANVWGAMLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEM 484
+ D +W A+LGACR GN+E+G R+ L+ M D G V N+YA G
Sbjct: 441 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 500
Query: 485 AAKEVRKNLSETRSKKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLS 520
E+R + E +K PGCS++++DG + EF+ D SHP+ ++I ML +S
Sbjct: 501 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
BLAST of Carg23198 vs. TAIR10
Match:
AT5G66520.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 276.2 bits (705), Expect = 4.7e-74
Identity = 211/502 (42.03%), Postives = 301/502 (59.96%), Query Frame = 0
Query: 14 IHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYACAIFKNLRHR 73
+ + + LK+IH +LKT L + Y + L+ +S +D F YA +F
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSD--FLPYAQIVFDGFDRP 80
Query: 74 NTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACA--LVYSELKRVG 133
+TF++N MIRG+ S P++++L Y ++ N YTFP L+KAC+ + E +
Sbjct: 81 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ-- 140
Query: 134 YLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVVVWTAMVDGYGKV 193
+HA + LGYEND + V++L+ Y++ + K+A +LFD+
Sbjct: 141 --IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXX 200
Query: 194 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNESITVSVL 253
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P+ + L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANAL 260
Query: 254 TACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFEGIPNKDAG 313
+ACA LGA+ QG W+HSY + R + +L L+DMY+KCG +E AL VF+ I K
Sbjct: 261 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 320
Query: 314 AWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDTGLKIFDQM 373
AW A+ISG A +G +++ F +M G + TF AVL AC++ +V+ G IF M
Sbjct: 321 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 380
Query: 374 YTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLGACRKYGN 433
Y ++P EHY C+VDL+ RAG++++A+ FI++ +A +WGA+L ACR + N
Sbjct: 381 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKN 440
Query: 434 IEVGNRIWRKLLAMGVTDCGTQVLSYNIYA-EAGWEMAAKEVRKNLSETRSKKTPGCSVL 493
IE+G I L+A+ G V NI+A + W+ AA E R+ + E K PGCS +
Sbjct: 441 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAA-ETRRLMKEQGVAKVPGCSTI 500
Query: 494 EVDGAVQEFLAGDLSHPQVQDI 512
++G EFLAGD SHP+++ I
Sbjct: 501 SLEGTTHEFLAGDRSHPEIEKI 512
BLAST of Carg23198 vs. TAIR10
Match:
AT5G59200.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 265.4 bits (677), Expect = 8.3e-71
Identity = 204/522 (39.08%), Postives = 309/522 (59.20%), Query Frame = 0
Query: 5 SFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYAC 64
S + + ++ K++ H+ IH +++T + + V L+ V +T D YA
Sbjct: 27 SRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD-----YAY 86
Query: 65 AIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALVY 124
+F + + N ++Y +MI G+V S + Y +I + +NY ++KAC L
Sbjct: 87 DVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL-- 146
Query: 125 SELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVVVWTAM 184
+V +HA V+ LG+ + V ++E Y +L A+ +FD+ +D V T
Sbjct: 147 ----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATXX 206
Query: 185 VDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNE 244
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NE
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSANE 266
Query: 245 SITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFEG 304
V VL+AC+ LGA+ G W+HS+ + R E + + AL++MYS+CG I A VF
Sbjct: 267 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 326
Query: 305 IPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDTG 364
+ +KD ++N MISG+AM+G +++ F M+ G + + T VA+L AC+H ++D G
Sbjct: 327 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 386
Query: 365 LKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLG 424
L++F+ M V+ V PQ EHY C+VDL+ R G +E+A FIE D + G +L
Sbjct: 387 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLS 446
Query: 425 ACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRSKKT 484
AC+ +GN+E+G +I ++L D GT VL N+YA +G + E+R+++ ++ +K
Sbjct: 447 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 506
Query: 485 PGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWE 526
PGCS +EVD + EFL GD++HP + I + L L+R+++++
Sbjct: 507 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534
BLAST of Carg23198 vs. TAIR10
Match:
AT5G06540.1 (Pentatricopeptide repeat (PPR) superfamily protein)
HSP 1 Score: 258.8 bits (660), Expect = 7.8e-69
Identity = 211/526 (40.11%), Postives = 306/526 (58.17%), Query Frame = 0
Query: 6 FKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAA--TSGDNDGSFFSYA 65
FK L+ S LK IHG LL+THL + + LLA+ ++ + + YA
Sbjct: 11 FKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 66 CAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALV 125
IF +++ N F++N +IR + P +A Y ++ ++ +N TFP LIKA + +
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 126 YSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSSVKDVVVWTA 185
E VG H+ ++ G++ND +V ++LV Y+ + A +F + +
Sbjct: 131 --ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRXXXXXXX 190
Query: 186 MVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPN 245
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVAN 250
Query: 246 ESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFE 305
E++ VSV+++CAHLGA+ G + Y + N IL TALVDM+ +CG IE A+ VFE
Sbjct: 251 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 310
Query: 306 GIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDT 365
G+P D+ +W+++I G+A++G K++ F +MI G + TF AVL+AC+H +V+
Sbjct: 311 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 370
Query: 366 GLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAML 425
GL+I++ M +G+ P+ EHY C+VD++ RAG + +AE FI K +A + GA+L
Sbjct: 371 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM---HVKPNAPILGALL 430
Query: 426 GACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRSKK 485
GAC+ Y N EV R+ L+ + G VL NIYA AG + +R + E KK
Sbjct: 431 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 490
Query: 486 TPGCSVLEVDGAVQEFLAG-DLSHPQVQDICEMLGSLSRMVKWETL 528
PG S++E+DG + +F G D HP+ +G + R KWE +
Sbjct: 491 PPGWSLIEIDGKINKFTMGDDQKHPE-------MGKIRR--KWEEI 522
BLAST of Carg23198 vs. TAIR10
Match:
AT1G08070.1 (Tetratricopeptide repeat (TPR)-like superfamily protein)
HSP 1 Score: 255.4 bits (651), Expect = 8.6e-68
Identity = 180/616 (29.22%), Postives = 273/616 (44.32%), Query Frame = 0
Query: 13 LIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYACAIFKNLRH 72
L+H K+LQ L+ IH ++K L + Y ++ L+ S +G YA ++FK ++
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEG--LPYAISVFKTIQE 98
Query: 73 RNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALVYSELKRVGY 132
N ++N+M RG+ LS P A+ Y+ +I GL N+YTFP ++K+CA S+ + G
Sbjct: 99 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA--KSKAFKEGQ 158
Query: 133 LVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSS------------------ 192
+H HV+ LG + D +V ++L+ Y L+ A +FDKS
Sbjct: 159 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXX 218
Query: 193 ------------------------------------------------------------ 252
Sbjct: 219 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVS 278
Query: 253 ----------VKDVVVW-------------TAMVDGYGKVXXXXXXXXXXXXXXXXXXXX 312
+ V +W A++D Y K
Sbjct: 279 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 338
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNESITVSVLTACAHLGAITQGLWMHSYA- 372
PN+ +S+L ACAHLGAI G W+H Y
Sbjct: 339 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 398
Query: 373 KRHRWESN-PILATALVDMYSKCGYIESALAVFEGIPNKDAGAWNAMISGVAMNGDVTKS 432
KR + +N L T+L+DMY+KCG IE+A VF I +K +WNAMI G AM+G S
Sbjct: 399 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 458
Query: 433 LELFDKMILNGTQATETTFVAVLAACTHAKMVDTGLKIFDQMYTVYGVRPQFEHYACVVD 492
+LF +M G Q + TFV +L+AC+H+ M+D G IF M Y + P+ EHY C++D
Sbjct: 459 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 518
Query: 493 LMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLGACRKYGNIEVGNRIWRKLLAMGVTD 524
L+ +G+ ++AEE I D +W ++L AC+ +GN+E+G L+ + +
Sbjct: 519 LLGHSGLFKEAEEMINMME---MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 578
BLAST of Carg23198 vs. Swiss-Prot
Match:
sp|Q9FI80|PP425_ARATH (Pentatricopeptide repeat-containing protein At5g48910 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H38 PE=2 SV=1)
HSP 1 Score: 285.4 bits (729), Expect = 1.4e-75
Identity = 206/533 (38.65%), Postives = 307/533 (57.60%), Query Frame = 0
Query: 5 SFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYAC 64
S ++ P I+ ++++ L +IH +K+ A +L ATS D YA
Sbjct: 21 SHPSSLFPQINNCRTIRDLSQIHAVFIKSGQMRDTLAAAEILRFCATS-DLHHRDLDYAH 80
Query: 65 AIFKNLRHRNTFMYNSMIRGYVLSRAPKQAI---LCYLALIDQGLFANNYTFPPLIKACA 124
IF + RN F +N++IRG+ S K I L Y + D+ + N +TFP ++KACA
Sbjct: 81 KIFNQMPQRNCFSWNTIIRGFSESDEDKALIAITLFYEMMSDEFVEPNRFTFPSVLKACA 140
Query: 125 LVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSSVK----- 184
+ + G +H + G+ D FV+S LV Y + +K ARVLF K+ ++
Sbjct: 141 --KTGKIQEGKQIHGLALKYGFGGDEFVMSNLVRMYVMCGFMKDARVLFYKNIIEKDMVV 200
Query: 185 ---------DVVVWTAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
++V+W M+DGY ++ XXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 201 MTDRRKRDGEIVLWNVMIDGYMRLGDCKAARMLFDXXXXXXXXXXXXXXXXXXXXXXXXX 260
Query: 245 XXXXXXXXXXXXXKPNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVD 304
XXXXXXXXXX +PN VSVL A + LG++ G W+H YA+ + +L +AL+D
Sbjct: 261 XXXXXXXXXXGDIRPNYVTLVSVLPAISRLGSLELGEWLHLYAEDSGIRIDDVLGSALID 320
Query: 305 MYSKCGYIESALAVFEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETT 364
MYSKCG IE A+ VFE +P ++ W+AMI+G A++G +++ F KM G + ++
Sbjct: 321 MYSKCGIIEKAIHVFERLPRENVITWSAMINGFAIHGQAGDAIDCFCKMRQAGVRPSDVA 380
Query: 365 FVAVLAACTHAKMVDTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKK 424
++ +L AC+H +V+ G + F QM +V G+ P+ EHY C+VDL+ R+G++++AEEFI
Sbjct: 381 YINLLTACSHGGLVEEGRRYFSQMVSVDGLEPRIEHYGCMVDLLGRSGLLDEAEEFI--- 440
Query: 425 MGGFSNVDANVWGAMLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEM 484
+ D +W A+LGACR GN+E+G R+ L+ M D G V N+YA G
Sbjct: 441 LNMPIKPDDVIWKALLGACRMQGNVEMGKRVANILMDMVPHDSGAYVALSNMYASQGNWS 500
Query: 485 AAKEVRKNLSETRSKKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLS 520
E+R + E +K PGCS++++DG + EF+ D SHP+ ++I ML +S
Sbjct: 501 EVSEMRLRMKEKDIRKDPGCSLIDIDGVLHEFVVEDDSHPKAKEINSMLVEIS 547
BLAST of Carg23198 vs. Swiss-Prot
Match:
sp|Q9FJY7|PP449_ARATH (Pentatricopeptide repeat-containing protein At5g66520 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H61 PE=2 SV=1)
HSP 1 Score: 276.2 bits (705), Expect = 8.5e-73
Identity = 211/502 (42.03%), Postives = 301/502 (59.96%), Query Frame = 0
Query: 14 IHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYACAIFKNLRHR 73
+ + + LK+IH +LKT L + Y + L+ +S +D F YA +F
Sbjct: 21 LQRCSKQEELKQIHARMLKTGLMQDSYAITKFLSFCISSTSSD--FLPYAQIVFDGFDRP 80
Query: 74 NTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACA--LVYSELKRVG 133
+TF++N MIRG+ S P++++L Y ++ N YTFP L+KAC+ + E +
Sbjct: 81 DTFLWNLMIRGFSCSDEPERSLLLYQRMLCSSAPHNAYTFPSLLKACSNLSAFEETTQ-- 140
Query: 134 YLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVVVWTAMVDGYGKV 193
+HA + LGYEND + V++L+ Y++ + K+A +LFD+
Sbjct: 141 --IHAQITKLGYENDVYAVNSLINSYAVTGNFKLAHLLFDRIPEPXXXXXXXXXXXXXXX 200
Query: 194 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNESITVSVL 253
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX +P+ + L
Sbjct: 201 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVEPDNVSLANAL 260
Query: 254 TACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFEGIPNKDAG 313
+ACA LGA+ QG W+HSY + R + +L L+DMY+KCG +E AL VF+ I K
Sbjct: 261 SACAQLGALEQGKWIHSYLNKTRIRMDSVLGCVLIDMYAKCGEMEEALEVFKNIKKKSVQ 320
Query: 314 AWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDTGLKIFDQM 373
AW A+ISG A +G +++ F +M G + TF AVL AC++ +V+ G IF M
Sbjct: 321 AWTALISGYAYHGHGREAISKFMEMQKMGIKPNVITFTAVLTACSYTGLVEEGKLIFYSM 380
Query: 374 YTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLGACRKYGN 433
Y ++P EHY C+VDL+ RAG++++A+ FI++ +A +WGA+L ACR + N
Sbjct: 381 ERDYNLKPTIEHYGCIVDLLGRAGLLDEAKRFIQEMP---LKPNAVIWGALLKACRIHKN 440
Query: 434 IEVGNRIWRKLLAMGVTDCGTQVLSYNIYA-EAGWEMAAKEVRKNLSETRSKKTPGCSVL 493
IE+G I L+A+ G V NI+A + W+ AA E R+ + E K PGCS +
Sbjct: 441 IELGEEIGEILIAIDPYHGGRYVHKANIHAMDKKWDKAA-ETRRLMKEQGVAKVPGCSTI 500
Query: 494 EVDGAVQEFLAGDLSHPQVQDI 512
++G EFLAGD SHP+++ I
Sbjct: 501 SLEGTTHEFLAGDRSHPEIEKI 512
BLAST of Carg23198 vs. Swiss-Prot
Match:
sp|Q9FIF7|PP435_ARATH (Putative pentatricopeptide repeat-containing protein At5g59200, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-E41 PE=3 SV=1)
HSP 1 Score: 265.4 bits (677), Expect = 1.5e-69
Identity = 204/522 (39.08%), Postives = 309/522 (59.20%), Query Frame = 0
Query: 5 SFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYAC 64
S + + ++ K++ H+ IH +++T + + V L+ V +T D YA
Sbjct: 27 SRRKTLISVLRSCKNIAHVPSIHAKIIRTFHDQDAFVVFELIRVCSTLDSVD-----YAY 86
Query: 65 AIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALVY 124
+F + + N ++Y +MI G+V S + Y +I + +NY ++KAC L
Sbjct: 87 DVFSYVSNPNVYLYTAMIDGFVSSGRSADGVSLYHRMIHNSVLPDNYVITSVLKACDL-- 146
Query: 125 SELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVVVWTAM 184
+V +HA V+ LG+ + V ++E Y +L A+ +FD+ +D V T
Sbjct: 147 ----KVCREIHAQVLKLGFGSSRSVGLKMMEIYGKSGELVNAKKMFDEMPDRDHVAATXX 206
Query: 185 VDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNE 244
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX NE
Sbjct: 207 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXVSANE 266
Query: 245 SITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFEG 304
V VL+AC+ LGA+ G W+HS+ + R E + + AL++MYS+CG I A VF
Sbjct: 267 FTAVCVLSACSDLGALELGRWVHSFVENQRMELSNFVGNALINMYSRCGDINEARRVFRV 326
Query: 305 IPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDTG 364
+ +KD ++N MISG+AM+G +++ F M+ G + + T VA+L AC+H ++D G
Sbjct: 327 MRDKDVISYNTMISGLAMHGASVEAINEFRDMVNRGFRPNQVTLVALLNACSHGGLLDIG 386
Query: 365 LKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLG 424
L++F+ M V+ V PQ EHY C+VDL+ R G +E+A FIE D + G +L
Sbjct: 387 LEVFNSMKRVFNVEPQIEHYGCIVDLLGRVGRLEEAYRFIENIP---IEPDHIMLGTLLS 446
Query: 425 ACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRSKKT 484
AC+ +GN+E+G +I ++L D GT VL N+YA +G + E+R+++ ++ +K
Sbjct: 447 ACKIHGNMELGEKIAKRLFESENPDSGTYVLLSNLYASSGKWKESTEIRESMRDSGIEKE 506
Query: 485 PGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWE 526
PGCS +EVD + EFL GD++HP + I + L L+R+++++
Sbjct: 507 PGCSTIEVDNQIHEFLVGDIAHPHKEAIYQRLQELNRILRFK 534
BLAST of Carg23198 vs. Swiss-Prot
Match:
sp|Q9FG16|PP367_ARATH (Pentatricopeptide repeat-containing protein At5g06540 OS=Arabidopsis thaliana OX=3702 GN=PCMP-H88 PE=3 SV=1)
HSP 1 Score: 258.8 bits (660), Expect = 1.4e-67
Identity = 211/526 (40.11%), Postives = 306/526 (58.17%), Query Frame = 0
Query: 6 FKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAA--TSGDNDGSFFSYA 65
FK L+ S LK IHG LL+THL + + LLA+ ++ + + YA
Sbjct: 11 FKHPKLALLQSCSSFSDLKIIHGFLLRTHLISDVFVASRLLALCVDDSTFNKPTNLLGYA 70
Query: 66 CAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALV 125
IF +++ N F++N +IR + P +A Y ++ ++ +N TFP LIKA + +
Sbjct: 71 YGIFSQIQNPNLFVFNLLIRCFSTGAEPSKAFGFYTQMLKSRIWPDNITFPFLIKASSEM 130
Query: 126 YSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSSVKDVVVWTA 185
E VG H+ ++ G++ND +V ++LV Y+ + A +F + +
Sbjct: 131 --ECVLVGEQTHSQIVRFGFQNDVYVENSLVHMYANCGFIAAAGRIFGQMGFRXXXXXXX 190
Query: 186 MVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPN 245
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX N
Sbjct: 191 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGVVAN 250
Query: 246 ESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFE 305
E++ VSV+++CAHLGA+ G + Y + N IL TALVDM+ +CG IE A+ VFE
Sbjct: 251 ETVMVSVISSCAHLGALEFGERAYEYVVKSHMTVNLILGTALVDMFWRCGDIEKAIHVFE 310
Query: 306 GIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDT 365
G+P D+ +W+++I G+A++G K++ F +MI G + TF AVL+AC+H +V+
Sbjct: 311 GLPETDSLSWSSIIKGLAVHGHAHKAMHYFSQMISLGFIPRDVTFTAVLSACSHGGLVEK 370
Query: 366 GLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAML 425
GL+I++ M +G+ P+ EHY C+VD++ RAG + +AE FI K +A + GA+L
Sbjct: 371 GLEIYENMKKDHGIEPRLEHYGCIVDMLGRAGKLAEAENFILKM---HVKPNAPILGALL 430
Query: 426 GACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRSKK 485
GAC+ Y N EV R+ L+ + G VL NIYA AG + +R + E KK
Sbjct: 431 GACKIYKNTEVAERVGNMLIKVKPEHSGYYVLLSNIYACAGQWDKIESLRDMMKEKLVKK 490
Query: 486 TPGCSVLEVDGAVQEFLAG-DLSHPQVQDICEMLGSLSRMVKWETL 528
PG S++E+DG + +F G D HP+ +G + R KWE +
Sbjct: 491 PPGWSLIEIDGKINKFTMGDDQKHPE-------MGKIRR--KWEEI 522
BLAST of Carg23198 vs. Swiss-Prot
Match:
sp|Q9LN01|PPR21_ARATH (Pentatricopeptide repeat-containing protein At1g08070, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=PCMP-H12 PE=2 SV=1)
HSP 1 Score: 255.4 bits (651), Expect = 1.6e-66
Identity = 180/616 (29.22%), Postives = 273/616 (44.32%), Query Frame = 0
Query: 13 LIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYACAIFKNLRH 72
L+H K+LQ L+ IH ++K L + Y ++ L+ S +G YA ++FK ++
Sbjct: 39 LLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEG--LPYAISVFKTIQE 98
Query: 73 RNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALVYSELKRVGY 132
N ++N+M RG+ LS P A+ Y+ +I GL N+YTFP ++K+CA S+ + G
Sbjct: 99 PNLLIWNTMFRGHALSSDPVSALKLYVCMISLGLLPNSYTFPFVLKSCA--KSKAFKEGQ 158
Query: 133 LVHAHVIVLGYENDPFVVSTLVEFYSLID-LKVARVLFDKSS------------------ 192
+H HV+ LG + D +V ++L+ Y L+ A +FDKS
Sbjct: 159 QIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRXXXXXXXXXXXXXXXX 218
Query: 193 ------------------------------------------------------------ 252
Sbjct: 219 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKTNVRPDESTMVTVVS 278
Query: 253 ----------VKDVVVW-------------TAMVDGYGKVXXXXXXXXXXXXXXXXXXXX 312
+ V +W A++D Y K
Sbjct: 279 ACAQSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKDVIS 338
Query: 313 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNESITVSVLTACAHLGAITQGLWMHSYA- 372
PN+ +S+L ACAHLGAI G W+H Y
Sbjct: 339 WNTLIGGYTHMNLYKEALLLFQEMLRSGETPNDVTMLSILPACAHLGAIDIGRWIHVYID 398
Query: 373 KRHRWESN-PILATALVDMYSKCGYIESALAVFEGIPNKDAGAWNAMISGVAMNGDVTKS 432
KR + +N L T+L+DMY+KCG IE+A VF I +K +WNAMI G AM+G S
Sbjct: 399 KRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSILHKSLSSWNAMIFGFAMHGRADAS 458
Query: 433 LELFDKMILNGTQATETTFVAVLAACTHAKMVDTGLKIFDQMYTVYGVRPQFEHYACVVD 492
+LF +M G Q + TFV +L+AC+H+ M+D G IF M Y + P+ EHY C++D
Sbjct: 459 FDLFSRMRKIGIQPDDITFVGLLSACSHSGMLDLGRHIFRTMTQDYKMTPKLEHYGCMID 518
Query: 493 LMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLGACRKYGNIEVGNRIWRKLLAMGVTD 524
L+ +G+ ++AEE I D +W ++L AC+ +GN+E+G L+ + +
Sbjct: 519 LLGHSGLFKEAEEMINMME---MEPDGVIWCSLLKACKMHGNVELGESFAENLIKIEPEN 578
BLAST of Carg23198 vs. TrEMBL
Match:
tr|A0A1S3ATN3|A0A1S3ATN3_CUCME (pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103482605 PE=4 SV=1)
HSP 1 Score: 776.9 bits (2005), Expect = 3.1e-221
Identity = 437/527 (82.92%), Postives = 476/527 (90.32%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIH++F DAI+PL+ K KS+QHLK+IH HLLKT+LP++PY ++PLL VAATSG + SFF
Sbjct: 1 MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYAC IFKNL+ RN FMYNSMIRGY LSR PKQAILCYL LID G AN YTFPPLIKAC
Sbjct: 61 SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVY ELKR+GYLVHAHV+VLGYEND FVVS LVEFYSL DLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
T MVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK
Sbjct: 181 TVMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PN+S+ VSVLTACAHLGAITQGLWMHSYAKR+ ++NPILATALVDMYSKCGYIESAL V
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGI NKDAGAWNAMISGVAM GDV KSLELFDKMI +GTQATE TFV++LAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
+ GL++FDQMY VY V+PQFEHYACVVDLMARAGMVEDAE+F+E+KMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
+L ACRKY NIE+G+RIW KL A+GV D GTQVLSYNI++EAG EMAAKEVRK SE RS
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETL 528
KK PGCSV+EVDGAVQEFLAGDLSHPQVQ ICEMLG LS+MVKWET+
Sbjct: 481 KKIPGCSVIEVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETV 527
BLAST of Carg23198 vs. TrEMBL
Match:
tr|A0A0A0KMY1|A0A0A0KMY1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G162080 PE=4 SV=1)
HSP 1 Score: 749.6 bits (1934), Expect = 5.3e-213
Identity = 428/527 (81.21%), Postives = 466/527 (88.43%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIH++F +AI+PL+ K KS+QHLK+IH HLLKT+L +SPY +APLL VAATSG + SFF
Sbjct: 1 MIHQTFNNAISPLLRKCKSVQHLKQIHAHLLKTYLSQSPYAIAPLLEVAATSGCDRDSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYAC IFKNL+ RN FMYNSMIRGY LSR PKQAILCYL L+D+G AN YTFPPLIKAC
Sbjct: 61 SYACGIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLMDRGFLANKYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVY ELKR+GYLVHAHVIVLGYEND FVVS LVEFYSL DLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVIVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSGKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
T MVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 TVMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
SVLTACAHLGAITQGLWMHSYAKR+ +SNPILATALVDMYSKCGYIESAL V
Sbjct: 241 XXXXXXXSVLTACAHLGAITQGLWMHSYAKRYGLDSNPILATALVDMYSKCGYIESALEV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGI NKDAGAWNAMISG AM G+V KSLELFDKMI +GTQATE TFV++LAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGFAMTGNVVKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
+ GL+ FDQMY VY V+PQFEHYACVVDLMARAGMVEDAE+F+E+KMGGFSNVDANVWGA
Sbjct: 361 ERGLEFFDQMYPVYRVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRS 480
+L ACR+Y NIE+G+RIW KL A+G+ D GTQVLSYNI++EAG EMAAKEVRK SE RS
Sbjct: 421 ILSACRQYRNIEIGDRIWTKLSALGLLDGGTQVLSYNIFSEAGREMAAKEVRKKFSEARS 480
Query: 481 KKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWETL 528
KK PGCSV+ VDGAVQEFLAGDLSHPQVQ ICEMLG LS+MVKWET+
Sbjct: 481 KKIPGCSVIVVDGAVQEFLAGDLSHPQVQHICEMLGFLSKMVKWETV 527
BLAST of Carg23198 vs. TrEMBL
Match:
tr|A0A1S3ASS3|A0A1S3ASS3_CUCME (pentatricopeptide repeat-containing protein At5g66520-like isoform X2 OS=Cucumis melo OX=3656 GN=LOC103482605 PE=4 SV=1)
HSP 1 Score: 679.5 bits (1752), Expect = 6.7e-192
Identity = 389/470 (82.77%), Postives = 425/470 (90.43%), Query Frame = 0
Query: 1 MIHKSFKDAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFF 60
MIH++F DAI+PL+ K KS+QHLK+IH HLLKT+LP++PY ++PLL VAATSG + SFF
Sbjct: 1 MIHQTFNDAISPLLRKCKSVQHLKQIHAHLLKTYLPQNPYAISPLLEVAATSGCDGDSFF 60
Query: 61 SYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKAC 120
SYAC IFKNL+ RN FMYNSMIRGY LSR PKQAILCYL LID G AN YTFPPLIKAC
Sbjct: 61 SYACRIFKNLQQRNIFMYNSMIRGYFLSRFPKQAILCYLDLIDHGFLANKYTFPPLIKAC 120
Query: 121 ALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLIDLKVARVLFDKSSVKDVVVW 180
ALVY ELKR+GYLVHAHV+VLGYEND FVVS LVEFYSL DLKVARVLFDKSS KDVVVW
Sbjct: 121 ALVYRELKRIGYLVHAHVVVLGYENDAFVVSALVEFYSLFDLKVARVLFDKSSAKDVVVW 180
Query: 181 TAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
T MVDGYGK XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK
Sbjct: 181 TVMVDGYGKXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 240
Query: 241 PNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAV 300
PN+S+ VSVLTACAHLGAITQGLWMHSYAKR+ ++NPILATALVDMYSKCGYIESAL V
Sbjct: 241 PNDSVIVSVLTACAHLGAITQGLWMHSYAKRYGLDANPILATALVDMYSKCGYIESALEV 300
Query: 301 FEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMV 360
FEGI NKDAGAWNAMISGVAM GDV KSLELFDKMI +GTQATE TFV++LAACTHAKMV
Sbjct: 301 FEGISNKDAGAWNAMISGVAMTGDVMKSLELFDKMIASGTQATEATFVSILAACTHAKMV 360
Query: 361 DTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGA 420
+ GL++FDQMY VY V+PQFEHYACVVDLMARAGMVEDAE+F+E+KMGGFSNVDANVWGA
Sbjct: 361 ERGLELFDQMYPVYWVQPQFEHYACVVDLMARAGMVEDAEKFVEEKMGGFSNVDANVWGA 420
Query: 421 MLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKE 471
+L ACRKY NIE+G+RIW KL A+GV D GTQVLSYNI++EAG EMAAKE
Sbjct: 421 ILSACRKYRNIEIGDRIWTKLSALGVLDGGTQVLSYNIFSEAGREMAAKE 470
BLAST of Carg23198 vs. TrEMBL
Match:
tr|A0A2I4GTJ2|A0A2I4GTJ2_9ROSI (pentatricopeptide repeat-containing protein At5g66520-like isoform X1 OS=Juglans regia OX=51240 GN=LOC109010759 PE=4 SV=1)
HSP 1 Score: 602.1 bits (1551), Expect = 1.4e-168
Identity = 349/527 (66.22%), Postives = 420/527 (79.70%), Query Frame = 0
Query: 1 MIHKSFK-DAIAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSF 60
MI K+ + +A+ L K K+L LK+IH HLLK+HLP +PY +APLL++AATS ND SF
Sbjct: 1 MIQKTVENNALVSLSQKCKTLNQLKQIHAHLLKSHLPVNPYAIAPLLSIAATS--NDASF 60
Query: 61 FSYACAIFKNLRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKA 120
SYA ++F++ RHRN F+YN+MIRG+ S +P +AILCY +++ GL NNYTFPPLIKA
Sbjct: 61 LSYARSVFEHFRHRNIFLYNTMIRGHAQSHSPVRAILCYFGMLNYGLVPNNYTFPPLIKA 120
Query: 121 CALVYSELKRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVV 180
C K +G LVHAH++ G+ +DPFVVS L+E+YS+ D+ AR+LFD + KDVV
Sbjct: 121 CTFSVPSSKLIGRLVHAHIVTFGFSDDPFVVSALIEYYSVAQDMGTARLLFDITPKKDVV 180
Query: 181 VWTAMVDGYGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
Query: 241 XKPNESITVSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESAL 300
X NES+ VSVLTACAHLGA+TQGLW+HSY KRH ESNPILATALVDMYSKCG +ESAL
Sbjct: 241 XXXNESVLVSVLTACAHLGAVTQGLWIHSYTKRHNLESNPILATALVDMYSKCGCVESAL 300
Query: 301 AVFEGIPNKDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAK 360
VF IP KDAGAWNAMISGVAMNGD KSL+LF +MI GTQ T+TTFVAVL ACTHAK
Sbjct: 301 LVFNTIPKKDAGAWNAMISGVAMNGDAMKSLDLFGEMITTGTQPTDTTFVAVLTACTHAK 360
Query: 361 MVDTGLKIFDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVW 420
MVD GLK+F++M T+YG+ P+ EHYACVVDL+ARAGM+E+AE FIE+KMGGFS DAN+W
Sbjct: 361 MVDQGLKLFERMDTIYGIVPKLEHYACVVDLLARAGMLEEAERFIEEKMGGFSRGDANIW 420
Query: 421 GAMLGACRKYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSET 480
GA+ ACR YGN+E+GNR+W+KL+ +GV D GT VLSYN+Y EAGWEM AK+VRK +S++
Sbjct: 421 GALQSACRIYGNVEIGNRVWKKLIDIGVVDSGTSVLSYNMYREAGWEMDAKKVRKTISDS 480
Query: 481 RSKKTPGCSVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWE 526
R KK PGCSV+EV G V+EFLAGDL H Q Q+IC+ L SLS+++ E
Sbjct: 481 RLKKKPGCSVIEVSGKVEEFLAGDLCHSQAQEICKTLDSLSKIINLE 525
BLAST of Carg23198 vs. TrEMBL
Match:
tr|A0A2P5ETW1|A0A2P5ETW1_9ROSA (Pentatricopeptide repeat OS=Trema orientalis OX=63057 GN=TorRG33x02_152170 PE=4 SV=1)
HSP 1 Score: 578.2 bits (1489), Expect = 2.1e-161
Identity = 339/519 (65.32%), Postives = 415/519 (79.96%), Query Frame = 0
Query: 10 IAPLIHKSKSLQHLKEIHGHLLKTHLPESPYGVAPLLAVAATSGDNDGSFFSYACAIFKN 69
I L K K+L+ LK+IH H+LK+ PE+P+ V P+L+ AATSG DGSFFSYA +IF +
Sbjct: 12 IISLSQKCKTLKQLKQIHAHVLKSSSPENPFPVGPVLSAAATSG--DGSFFSYARSIFDH 71
Query: 70 LRHRNTFMYNSMIRGYVLSRAPKQAILCYLALIDQGLFANNYTFPPLIKACALVY--SEL 129
LRHRN FMYNSMIRGYV + +P ++LCYL ++D GL AN+YTFPPL+KAC ++ S
Sbjct: 72 LRHRNVFMYNSMIRGYVRTSSPLDSVLCYLDMLDYGLAANHYTFPPLMKACTILVPGSTK 131
Query: 130 KRVGYLVHAHVIVLGYENDPFVVSTLVEFYSLI-DLKVARVLFDKSSVKDVVVWTAMVDG 189
+G LVHAHV+ G+ +DPFV S L+EFYS + ++ R+LFD KDVV+
Sbjct: 132 LIIGRLVHAHVVKFGFRDDPFVNSALIEFYSSVCEMGTGRLLFDNCHKKDVVLXXXXXXX 191
Query: 190 YGKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNESIT 249
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNE++
Sbjct: 192 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXKPNEAVL 251
Query: 250 VSVLTACAHLGAITQGLWMHSYAKRHRWESNPILATALVDMYSKCGYIESALAVFEGIPN 309
VSVLTACAHLGA+ QG+W+HSYAKR++ ++NPILATALVDMYSKCG++ESALAVFEGI N
Sbjct: 252 VSVLTACAHLGAVMQGIWVHSYAKRNKLDANPILATALVDMYSKCGFLESALAVFEGIVN 311
Query: 310 KDAGAWNAMISGVAMNGDVTKSLELFDKMILNGTQATETTFVAVLAACTHAKMVDTGLKI 369
KD AWNAMI+G+++NG+ KSLE FDKM ++ Q TETTF+AVL ACTHAKMV+ GL +
Sbjct: 312 KDVEAWNAMITGLSLNGNARKSLEFFDKMTIDRVQPTETTFIAVLTACTHAKMVNEGLNL 371
Query: 370 FDQMYTVYGVRPQFEHYACVVDLMARAGMVEDAEEFIEKKMGGFSNVDANVWGAMLGACR 429
FD+M T+YGV+PQ EH+ACVVDL+ARAGMVE+AE+FIE+KMGGF DANVWGA+LGACR
Sbjct: 372 FDEMGTIYGVKPQREHHACVVDLLARAGMVEEAEKFIEEKMGGFEGWDANVWGALLGACR 431
Query: 430 KYGNIEVGNRIWRKLLAMGVTDCGTQVLSYNIYAEAGWEMAAKEVRKNLSETRSKKTPGC 489
YG +EVGNR+W+KL MG+ DCG VLSYN+Y EAGWEM AK VRK +S++ K PGC
Sbjct: 432 VYGKVEVGNRVWKKLADMGIADCGAHVLSYNMYREAGWEMQAKGVRKMISKSGMLKQPGC 491
Query: 490 SVLEVDGAVQEFLAGDLSHPQVQDICEMLGSLSRMVKWE 526
SV+EV+G +EFLAGDL HPQ Q+I ++L S +MV E
Sbjct: 492 SVIEVNGVFEEFLAGDLCHPQAQEIFKILDSFFKMVYLE 528
The following BLAST results are available for this feature:
| Match Name | E-value | Identity | Description | |
|---|
| XP_022922110.1 | 4.0e-273 | 99.62 | pentatricopeptide repeat-containing protein At5g66520-like [Cucurbita moschata] ... | [more] |
| XP_023549650.1 | 3.5e-269 | 98.68 | pentatricopeptide repeat-containing protein At5g06540-like [Cucurbita pepo subsp... | [more] |
| XP_022970147.1 | 1.0e-268 | 97.92 | pentatricopeptide repeat-containing protein At5g48910-like [Cucurbita maxima] >X... | [more] |
| XP_022154784.1 | 1.4e-236 | 87.33 | pentatricopeptide repeat-containing protein At5g66520-like [Momordica charantia] | [more] |
| XP_008437067.1 | 4.7e-221 | 82.92 | PREDICTED: pentatricopeptide repeat-containing protein At5g66520-like isoform X1... | [more] |
| Match Name | E-value | Identity | Description | |
|---|
| AT5G48910.1 | 7.8e-77 | 38.65 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT5G66520.1 | 4.7e-74 | 42.03 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G59200.1 | 8.3e-71 | 39.08 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
| AT5G06540.1 | 7.8e-69 | 40.11 | Pentatricopeptide repeat (PPR) superfamily protein | [more] |
| AT1G08070.1 | 8.6e-68 | 29.22 | Tetratricopeptide repeat (TPR)-like superfamily protein | [more] |
