Carg22729 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGCATTTTCCGATCCGGTTTCCCTCAGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATGTTCGTATCACTAATCCTTTCATTCGGTTCTTCTTTGTTTTCTTGATTTTGCGATTCTCAGTTTTGTTGTTCTTATGCATATTCCTGTTTTTTTTTTTTTTTTTTCTGTTTCTGGTTTGTTTTGCTATGTTGTCATTGGTATATGATGTTCTGGATTATTGTTTTCTTTTTTTCCCCCATTTGGTTTGGTTGTGAGGTCGAATTTGTTTATAGGCGATTTTGTTGGTTAATTTAAGATTTGAGATGAATTTGAAGAGATTGGTGTTGAGTTTGTTGGTTTCTGATGAAGATTGCGGGATTGGTTTCTTTGAATAGAATGAGATGAATTTTTTGGCTCTTCGATTGAAACAAGAGACAGATTATTGTGTTCTCTCTCGATTGAATCTGATTCCGATTGCCTTCTTGATTCAGCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGTACTTACTGTGTTGTTGTTCTACCAATGGCTTGATTGAGTTGCATATGAATTTGCTGGCTATAATCAGTAGTAATATCTTGGATTGCAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGGTATTGTGGATTTTGGTTTCTGTTTATCTTCTTGTTCTTGTTTATCATGGTCTTTACAGAGTCTTAGAACAGTTTTTTAATTTTTTTGTTATTATATCTTTTGTTTTCAGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGGTATTATCCTGATCCTATCCATCCTATTTATTGATATTGAATTCTACCTATATCGTAAACTTGTAGATCGTAAGGTCGTGTTCGATAATGTCATGTTCTTGGCTATGTTTCTGAGGCTTAAGCATATAGAAACATCACTAACTATCAAATTTTGAAAACAAAGAACCAAGGTAAACTTGTGAATCGTTAAGTCCTGTTTGATAATGGCATGTTCTTGGCTATATTTTTGGGGCTTAAGCATATAGAAACTTTAACTATCGAATTTCGAAAACAAAGAACTAGGTAAAATTGTGAATCATATGGTCTGTTCTTGACTATGTTTTTGGGACTTGAGCTTAAGCATATAGAAACTTCTCTTAACTATCAAATTTTGAAAACAAAGAACCAGGTAAAATCGTGAATCATAAGGTCTTGTTTGATAACGACATGTTCTTGGTTATGTTTATGGGGCTTAAGCATATAGAAACTTCTCTAACTATCAAATTTTGAAAACGAAGAACCTGGTAAAATTGTGAATCATAAGGTCCCATTTGATAACGACTTGTCTTGTTCTTGGTTGTGTTTGGGAGGCTTGAACATATAGAAACTTCACTAACTATTAAACTTTGAAAACAAAGAACATGACTTTGAACAACTCTGCATACATACTTCCATGAAATTAGAAAACCGATAACGAAAACATTACCAAACGAGCTTTAATGGGTAACCTTCTGGGTAGAGACAGTTTCATTGACACAGTCACATAGAAAGGAGGTTGTTTTCTAAATCTCATAAACCCTTTGTGTTATCCTCCCCATTGCAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCGAGGACGACGGACCTACAGTTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAGAGAGGAAAAAACATCAACCTTCTTCCTTATTGCACATAATATCAAGTTCTTGTCAAAACATAAAGTCTATATTTTTAGGGTCCACATTGATGCTCAGTTCATATATTTTTTTCTTTTTTCTTTTTTCTTTTTTTCCCCCCTTATTTTTTCATTAATATAATAG ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGCATTTTCCGATCCGGTTTCCCTCAGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGGTATTGTGGATTTTGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCGAGGACGACGGACCTACAGTTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAGAGAGGAAAAAACATCAACCTTCTTCCTTATTGCACATAATATCAAGTTCTTGTCAAAACATAAAGTCTATATTTTTAGGGTCCACATTGATGCTCAGTTCATATATTTTTTTCTTTTTTCTTTTTTCTTTTTTTCCCCCCTTATTTTTTCATTAATATAATAG ATGAGGCTTGAAGTGGAAGAAAACGATGTCGACGACGTTCTTCTTCCTCCTTCCAACTTCTCCATGGTTGAGGATGGCATTTTCCGATCCGGTTTCCCTCAGCCGGCTAATTTCCCCTTCCTCAAGAACCTCAACCTCCGCTCCATCATCTATCTGTGTCCAGAACCCTATCCAGAGGAGAATTTGGAGTTTCTTAGAGCCAATAACATCAAGCTTTTTCAATTCAAAATCGAAGGAAAAAAGGAGCCTTTCGTTTCAATGCCCAAGGATGCTATTCTGGATGCCCTAAAAATCCTAATTGGTATTGTGGATTTTGATGTTAGGAATCATCCCATTTTGATCCACTGCAAGCGTGGAAAGCATCGAACAGGCTCGCTGGTCGGTTGCCTGAGAAAGTTTCAGAACTGGTGCTTGACATCAGTGTTCGAGGAGTACCAGCGATTTGCAGGCATGAAGTCGAGGACGACGGACCTACAGTTCATCGAGACGTTCGACATCAGTTTGCTGAGGCAATGTGTTTACAGCATCATATACCAGTACCAAGGTTACAGCCAAAGCAAGAGGAGGCTGGTCTACCGAGAAGAAAATTTGCAGAAACCCCAACCAACATCAGTTTAG MRLEVEENDVDDVLLPPSNFSMVEDGIFRSGFPQPANFPFLKNLNLRSIIYLCPEPYPEENLEFLRANNIKLFQFKIEGKKEPFVSMPKDAILDALKILIGIVDFDVRNHPILIHCKRGKHRTGSLVGCLRKFQNWCLTSVFEEYQRFAGMKSRTTDLQFIETFDISLLRQCVYSIIYQYQGYSQSKRRLVYREENLQKPQPTSV
BLAST of Carg22729 vs. NCBI nr
Match: XP_023005753.1 (probable tyrosine-protein phosphatase At1g05000 [Cucurbita maxima] >XP_023520655.1 probable tyrosine-protein phosphatase At1g05000 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 406.0 bits (1042), Expect = 7.7e-110 Identity = 200/205 (97.56%), Postives = 200/205 (97.56%), Query Frame = 0
BLAST of Carg22729 vs. NCBI nr
Match: XP_022933780.1 (probable tyrosine-protein phosphatase At1g05000 [Cucurbita moschata]) HSP 1 Score: 404.4 bits (1038), Expect = 2.2e-109 Identity = 199/205 (97.07%), Postives = 200/205 (97.56%), Query Frame = 0
BLAST of Carg22729 vs. NCBI nr
Match: XP_022152829.1 (probable tyrosine-protein phosphatase At1g05000 [Momordica charantia]) HSP 1 Score: 370.5 bits (950), Expect = 3.6e-99 Identity = 180/205 (87.80%), Postives = 190/205 (92.68%), Query Frame = 0
BLAST of Carg22729 vs. NCBI nr
Match: XP_008443701.1 (PREDICTED: probable tyrosine-protein phosphatase At1g05000 [Cucumis melo]) HSP 1 Score: 364.0 bits (933), Expect = 3.3e-97 Identity = 174/205 (84.88%), Postives = 191/205 (93.17%), Query Frame = 0
BLAST of Carg22729 vs. NCBI nr
Match: XP_022961021.1 (probable tyrosine-protein phosphatase At1g05000 [Cucurbita moschata]) HSP 1 Score: 364.0 bits (933), Expect = 3.3e-97 Identity = 177/205 (86.34%), Postives = 186/205 (90.73%), Query Frame = 0
BLAST of Carg22729 vs. TAIR10
Match: AT3G02800.1 (Tyrosine phosphatase family protein) HSP 1 Score: 290.4 bits (742), Expect = 8.5e-79 Identity = 142/203 (69.95%), Postives = 163/203 (80.30%), Query Frame = 0
BLAST of Carg22729 vs. TAIR10
Match: AT5G16480.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 278.1 bits (710), Expect = 4.4e-75 Identity = 135/207 (65.22%), Postives = 163/207 (78.74%), Query Frame = 0
BLAST of Carg22729 vs. TAIR10
Match: AT4G03960.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 213.4 bits (542), Expect = 1.3e-55 Identity = 96/166 (57.83%), Postives = 129/166 (77.71%), Query Frame = 0
BLAST of Carg22729 vs. TAIR10
Match: AT1G05000.2 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 212.2 bits (539), Expect = 2.9e-55 Identity = 104/186 (55.91%), Postives = 125/186 (67.20%), Query Frame = 0
BLAST of Carg22729 vs. TAIR10
Match: AT2G32960.1 (Phosphotyrosine protein phosphatases superfamily protein) HSP 1 Score: 201.4 bits (511), Expect = 5.2e-52 Identity = 101/202 (50.00%), Postives = 131/202 (64.85%), Query Frame = 0
BLAST of Carg22729 vs. Swiss-Prot
Match: sp|Q681Z2|DSP3_ARATH (Tyrosine-protein phosphatase DSP3 OS=Arabidopsis thaliana OX=3702 GN=DSP3 PE=1 SV=1) HSP 1 Score: 290.4 bits (742), Expect = 1.5e-77 Identity = 142/203 (69.95%), Postives = 163/203 (80.30%), Query Frame = 0
BLAST of Carg22729 vs. Swiss-Prot
Match: sp|Q9FFD7|DSP5_ARATH (Tyrosine-protein phosphatase DSP5 OS=Arabidopsis thaliana OX=3702 GN=DSP5 PE=1 SV=1) HSP 1 Score: 278.1 bits (710), Expect = 7.9e-74 Identity = 135/207 (65.22%), Postives = 163/207 (78.74%), Query Frame = 0
BLAST of Carg22729 vs. Swiss-Prot
Match: sp|Q9ZVN4|DSP1_ARATH (Tyrosine-protein phosphatase DSP1 OS=Arabidopsis thaliana OX=3702 GN=DSP1 PE=1 SV=1) HSP 1 Score: 228.8 bits (582), Expect = 5.5e-59 Identity = 104/154 (67.53%), Postives = 125/154 (81.17%), Query Frame = 0
BLAST of Carg22729 vs. Swiss-Prot
Match: sp|Q0DX67|DSP2_ORYSJ (Probable tyrosine-protein phosphatase DSP2 OS=Oryza sativa subsp. japonica OX=39947 GN=DSP2 PE=2 SV=2) HSP 1 Score: 214.5 bits (545), Expect = 1.1e-54 Identity = 101/161 (62.73%), Postives = 121/161 (75.16%), Query Frame = 0
BLAST of Carg22729 vs. Swiss-Prot
Match: sp|Q940L5|PDSP4_ARATH (Probable tyrosine-protein phosphatase DSP4 OS=Arabidopsis thaliana OX=3702 GN=DSP4 PE=2 SV=1) HSP 1 Score: 213.4 bits (542), Expect = 2.4e-54 Identity = 96/166 (57.83%), Postives = 129/166 (77.71%), Query Frame = 0
BLAST of Carg22729 vs. TrEMBL
Match: tr|A0A1S3B862|A0A1S3B862_CUCME (probable tyrosine-protein phosphatase At1g05000 OS=Cucumis melo OX=3656 GN=LOC103487232 PE=4 SV=1) HSP 1 Score: 364.0 bits (933), Expect = 2.2e-97 Identity = 174/205 (84.88%), Postives = 191/205 (93.17%), Query Frame = 0
BLAST of Carg22729 vs. TrEMBL
Match: tr|A0A0A0M371|A0A0A0M371_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G658010 PE=4 SV=1) HSP 1 Score: 357.5 bits (916), Expect = 2.1e-95 Identity = 171/205 (83.41%), Postives = 189/205 (92.20%), Query Frame = 0
BLAST of Carg22729 vs. TrEMBL
Match: tr|A0A2P4HG57|A0A2P4HG57_QUESU (Putative tyrosine-protein phosphatase OS=Quercus suber OX=58331 GN=CFP56_02243 PE=4 SV=1) HSP 1 Score: 330.5 bits (846), Expect = 2.7e-87 Identity = 158/205 (77.07%), Postives = 178/205 (86.83%), Query Frame = 0
BLAST of Carg22729 vs. TrEMBL
Match: tr|M5W121|M5W121_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G361100 PE=4 SV=1) HSP 1 Score: 326.2 bits (835), Expect = 5.1e-86 Identity = 156/198 (78.79%), Postives = 174/198 (87.88%), Query Frame = 0
BLAST of Carg22729 vs. TrEMBL
Match: tr|A0A2P5C2D6|A0A2P5C2D6_9ROSA (Protein-tyrosine phosphatase SIW14-like OS=Trema orientalis OX=63057 GN=TorRG33x02_299980 PE=4 SV=1) HSP 1 Score: 323.2 bits (827), Expect = 4.3e-85 Identity = 155/205 (75.61%), Postives = 177/205 (86.34%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: None |