Carg22711-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCCAAGAACGCACAGATCCACGTCCACCTTCGTCTTGGGTGTTCAAATTTGGCGTGCGCTTGTTTAAATCATCAGATATTGTAATCTTGGTGATCGGGCAGATTGGAAGAAGCTTTCCTTTATTGGGTTCGCGATGGAGAATGGAGCAGTTTCTTCCGAGACTCAACAGGGGGCGTCTTATACCTACTGGGTCAGGGAGACACGAGAGGATGCGGCTCCACTTCCTGTCCCTCGCAAGCTCTCGGCTGACGACATTATTGCTTCTCAAGCGTCTCAGCCTCCCACCCTTGGCTCCGTCTGGAATCGGGTATGTTTCGTTTGTAATGGTCATTCTTGTTGATGAAATATGGATATTTTGATTTCTTTAAGGATTAATGTTAATGGTATGGGTCGTGTGGCTGGGAGGAATATAGCGTTTGTGATGATACCTGAACTTGGAAATTCAAGTCCTCTCCAATATAAAAGGAGTCTCGAATTTACTGCAAAAAAGTTGAAATGGTATCACATCCTCTATAATGAGAAAGATTTGAAAGGAATGTTGTTTAAATTTGTTTTGTTAGAAAGAAGATTTGTTAATGTTCTTGACTTGAGATAATCTAGACTTTGTTAATTTTCTTTGATCCATTCGGTTGGGTAATGTTGATATCATGAATAAAGTTAACAGTGGGGAACGGAGTCAGAATTTCGTTATGATTAACTTGCCTGTTTTAGATATGGCTAACAAATACTCAAAGTAAGTTAAATGGTCAGCAACTTAGATTCCCATACATGGAAGGCCACTAAAATGATTGCCTTCTGATGATCTATGTTTCTTTTCTTGGCTTTTCTTGGCTTTTCTTGGCTAAGTGGCGTTTGCACGTGTCTGATGAATTTTGTTGTTAATGTTATTTGTTTTTTCTACCTTTGTAGGCTGGAACTTGGGAGGAGAAGAACTTGAATAAATGGGCAAGTGATAGAATGAAGGTTGGTGACCTCAACAAGCTGCAATAATATTGTACATTTTTTATACGTTCTTTCTGTTTATCTGCTGTTGTCTTTTTCTAACACGATTTCTCTCTTTCCCCACCTTTATTGTAGGAGTTGCTAATGTCAGTAGATTCCTTGGAGTTCTCCACCGGTAAAGCTGAAATAGAGGATGTATCGAAGTGTGTTGGGGATGTAAGTTCTCAGTAGTCTTTCTATTAGAATAGGTCCATATGAATGCTTGTTTTATATACTCAACTGTGAATGTTTTTGGTGGGATTTGCAGTATGAACAAATCAAACAAATCCGTACCTGCTTGTGGTGGTATAATTCTTGAAATAAAATTAGTCACTGTCGTTTATTCTTAATTATTTGTTGATTTTAAGTTAAATAGATACGTAAAATTCTTGAAATATAATGTGGTACATTGAAAATCTTGGGTGTGTATTGGTTTCTCTAGTATTCTGTTCGAGTTCAACATTTCGTACATTTGCAGCATAGCATCACTATGAAATAGTAATACTATTTGAGTTGTAATTTGGCTGATTTTACTATATCTTTTGCTCATGTTTTGTGGTTTCTCTCTGGAATTTCTTGCTATTCGTATCTGTTTAGTGCTTTCCTTCTTTACTTTTCCTTGTCCTAATTGATTTAGAATCAGTATTTCAAAATTAAAGGATAAGACTTGTTGCTTCCTTGATGTTATTGGCATCTAATTGCAATTTGCTTAGGTTATTTGATTTTAAACGATAATTGGGTGCGCATCCACTGCTTTCACATGTTTCTTATTAAATCCTTTGTTGGGCAGGGGAGATGCGTTATGACGTTATCATCCTGCCTTTAGCCTGTTTCAACTATTAATCAATTAGTTTCCATTTCTTATGAAAAATGGAGTCTGCGTGTCTAGGGTGTCTATTTCATGGTGTGCTCTGATTCCATGTCTTTTGATCACCTTCTATAACGTAGCACAAATATTGGAGAAGTTTTGAACCGATCTTTATTTGAATAATACCCCAATTGTGAACTGTTATGGGCCCAAGTTTGCAATCGAGTTATGGGTCTCTTGTAAGTGGAGGTAGCCGGTGTTTGTGTGAGGGAAGACATAAAATGCTTCTTTCGATCTATTTGAATAATTGTAAGGCTCAAATAGAGGGAACCTTAATTCCTCTTAGTTAAAGTACTCAAGACTAAATTGATAATTTTTACCTACCATTTTCATTGATGCTTATGACTATTTATACAAATTGTATAATAATCATTGTTACATCAACGGAACCATGACTCTATCATGGAAGCAAGTTGTATAATAATCATTGTTACATCAACGGAACCATGACTCTATCATGGAAGATCATCCTTCTAAAACAAGGGAAATAACTAATAATAGAAATGAACGTGGAAGACTCCTCCTTTAACTGCATAAAGAAAAATTCAACCAATGGGTTCCATACATGACTGCTTCTTTTTGGCATGAGTGTAATGTGTGCACACTTGTAGTGACATGTATCACAAACCCCTTAGTAATCCAAGGTAACCATGTTTTACCTGGATGTAAACACTCAAAAACCTTGCTGTAAAAATAAAGACCAGCCACAGTAACCAACCAGAAACTAGTTAAACAGAGGGAAAAACAGGGTAATAAAAACCAAAAAACAGGGTAATAAAAACCAGTAGCTATACAGTAATTCCTGTACTATATCTACTCCTTCCCCCTTCCCCCTTAGAACAACTCGTCTACATATGGTTACTTCCATGTTGTTCTATTCCTCATATGGTTAAAGAAAACTTCACTAGAGAAAGTGCAAGATCCCATTGCCGCAGTTTGTTTCCACATAGACAACGCATCAAATTGATCTATGCCTGCAATGGAACACCAATGCCATTTCCCCCTTTTTCTTCTGCTAGTATATCAATGACTCAAATTTCTGAGTATCATGTATTCTACATTCATGTGTGCAGGCTTTTTTGGTGACTGTCCGTAACAAGAAACGTGTTGGTTATACATATGAACTCACATTGAAAATTAAAGGTAGTGGTTAGCTTAATTAGAATTACATTTATTTAACATCACTTTCCTTCCGTTTGTCTATGTATTTACTATCACGATTGTGTATGATATCAGGTGAGTGGACAATTAAACAGGAGAAAAAGATAGTGAAGGGGCATATAGACGTCCCAGAGTTCTCATTTGGTGAGCTAGATGAATTGCAGGTACATTGTTCTTTGTTTCATTAGTGTATTTTGGTGGCTGCAAGTTTCTTGAATGGTCTGGAGTAATAATATAAACGAATTCATTTTCTTTCCAAACGTTAGGCTGTCTTGGATGGTGGATGAATGTAAACAATATATTTCTTGCCTTTTCATGCTTCGGTTTTTCTTGATGGATTCCTCCAGAGCCAAATAAACCTAGGGAGTTGCGAGCTAATGTGTGGCTCATCAAGGCTGATACCTTACCTTTTTCCTTTTGCCTCGATTTGACTTAAATAATTGTTTATGTTAAACCGAGGGCTTAGCCAAAGCTGCCAAACTCAACCCTATACTAAAAGCTCTGAGGGATATCCAAAAGTTTGTGGATTTTGTAATGGCCCAGGCTTTTTCTTTCTAGTTTCCTCTCAAGGTTTTTAAGATGCGTCTGCTTGGGGAGGTTTCCACACCCTTATAAAGAGTGCTTCGTTCTCCTCCCCAACCAATGTGGGATCTCACAATTCATTCCCCTTCGGGGCCCAGCCTCCTCATTGGCACTCGATCCTTTCTTCAATCGATGTGGGACTCTCCAATCCACCCCCTTCGGGACTAGTGTTCTTGCTGGCACACCGCCTCGTGCCACCCCCTTTGGGGCTTAGACTGCCCGTTGGCACATCGCTCGGTGTTTGGCTCTAATACCATTTGTAACAGCTTAAGTCCACCGCTAGCACATATTGTCCTCTTTGGGCTTTTCCTTTCGGGTTTCCTTTTCAAAGTTTTTAAAATGCGTTTGCTAGGGAGAGTTTTCTACACCCTTATAAAGAATGCTTCGTTCTTCTCCTTAACCGATGTGGGATCTCATAGAACCGATCGGGGCAATAATGTTTTAACGATAATATGATACTTTGTATTACTTTGGCTGTATCCTCTTGTGATCTGGGCAGTAAAATTTTACTTTTGAAACATAACAGATGGAAGTGAGATTGAGCGAAGAGAAAGATCTTCCGGGTTCGGATAAGCAGCAGATTTGCCAAGATTTGAAGCGATTCTTGCAGCCCGTTCGTGAAAAGTTGCTTCAATTAGAGCAGGAGCTCAAAGAAAGATAAAAAGGTTCATTCTTAACAACGTGTACCAATTATTTTTGTACTTCCTACGTTTGTTTGGCAAGAATGTCTTATCGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTGTAATGCAACTAAATAACGCTTATTTTGTTGTGGGAACTTAATAGATTCTTCAATGTTTAAGGTACTTTGAGGCCCTTAGATATGCTGGGACTGTTATTATTTTTATCAGATCCCTTGTGTGGTTCTAAGTCACTGCATTGAATATGATTCCTATCTAGTGTGGAATATATGACAACGGTGGAGTGTTAGAGTATTTTTATTGCTCGGTCG TTCCAAGAACGCACAGATCCACGTCCACCTTCGTCTTGGGTGTTCAAATTTGGCGTGCGCTTGTTTAAATCATCAGATATTGTAATCTTGGTGATCGGGCAGATTGGAAGAAGCTTTCCTTTATTGGGTTCGCGATGGAGAATGGAGCAGTTTCTTCCGAGACTCAACAGGGGGCGTCTTATACCTACTGGGTCAGGGAGACACGAGAGGATGCGGCTCCACTTCCTGTCCCTCGCAAGCTCTCGGCTGACGACATTATTGCTTCTCAAGCGTCTCAGCCTCCCACCCTTGGCTCCGTCTGGAATCGGGCTGGAACTTGGGAGGAGAAGAACTTGAATAAATGGGCAAGTGATAGAATGAAGGAGTTGCTAATGTCAGTAGATTCCTTGGAGTTCTCCACCGGTAAAGCTGAAATAGAGGATGTATCGAAGTGTGTTGGGGATGCTTTTTTGGTGACTGTCCGTAACAAGAAACGTGTTGGTTATACATATGAACTCACATTGAAAATTAAAGGTGAGTGGACAATTAAACAGGAGAAAAAGATAGTGAAGGGGCATATAGACGTCCCAGAGTTCTCATTTGGTGAGCTAGATGAATTGCAGATGGAAGTGAGATTGAGCGAAGAGAAAGATCTTCCGGGTTCGGATAAGCAGCAGATTTGCCAAGATTTGAAGCGATTCTTGCAGCCCGTTCGTGAAAAGTTGCTTCAATTAGAGCAGGAGCTCAAAGAAAGATAAAAAGGTTCATTCTTAACAACGTGTACCAATTATTTTTGTACTTCCTACGTTTGTTTGGCAAGAATGTCTTATCGGATCATATCACAAGGGGCCATTGAGATGCTAAAATTGTAATGCAACTAAATAACGCTTATTTTGTTGTGGGAACTTAATAGATTCTTCAATGTTTAAGGTACTTTGAGGCCCTTAGATATGCTGGGACTGTTATTATTTTTATCAGATCCCTTGTGTGGTTCTAAGTCACTGCATTGAATATGATTCCTATCTAGTGTGGAATATATGACAACGGTGGAGTGTTAGAGTATTTTTATTGCTCGGTCG ATGGAGAATGGAGCAGTTTCTTCCGAGACTCAACAGGGGGCGTCTTATACCTACTGGGTCAGGGAGACACGAGAGGATGCGGCTCCACTTCCTGTCCCTCGCAAGCTCTCGGCTGACGACATTATTGCTTCTCAAGCGTCTCAGCCTCCCACCCTTGGCTCCGTCTGGAATCGGGCTGGAACTTGGGAGGAGAAGAACTTGAATAAATGGGCAAGTGATAGAATGAAGGAGTTGCTAATGTCAGTAGATTCCTTGGAGTTCTCCACCGGTAAAGCTGAAATAGAGGATGTATCGAAGTGTGTTGGGGATGCTTTTTTGGTGACTGTCCGTAACAAGAAACGTGTTGGTTATACATATGAACTCACATTGAAAATTAAAGGTGAGTGGACAATTAAACAGGAGAAAAAGATAGTGAAGGGGCATATAGACGTCCCAGAGTTCTCATTTGGTGAGCTAGATGAATTGCAGATGGAAGTGAGATTGAGCGAAGAGAAAGATCTTCCGGGTTCGGATAAGCAGCAGATTTGCCAAGATTTGAAGCGATTCTTGCAGCCCGTTCGTGAAAAGTTGCTTCAATTAGAGCAGGAGCTCAAAGAAAGATAA MENGAVSSETQQGASYTYWVRETREDAAPLPVPRKLSADDIIASQASQPPTLGSVWNRAGTWEEKNLNKWASDRMKELLMSVDSLEFSTGKAEIEDVSKCVGDAFLVTVRNKKRVGYTYELTLKIKGEWTIKQEKKIVKGHIDVPEFSFGELDELQMEVRLSEEKDLPGSDKQQICQDLKRFLQPVREKLLQLEQELKER
BLAST of Carg22711-RA vs. NCBI nr
Match: XP_022933923.1 (uncharacterized protein LOC111441189 [Cucurbita moschata]) HSP 1 Score: 382.5 bits (981), Expect = 8.9e-103 Identity = 194/200 (97.00%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Carg22711-RA vs. NCBI nr
Match: XP_022973883.1 (uncharacterized protein LOC111472472 [Cucurbita maxima]) HSP 1 Score: 382.5 bits (981), Expect = 8.9e-103 Identity = 193/200 (96.50%), Postives = 196/200 (98.00%), Query Frame = 0
BLAST of Carg22711-RA vs. NCBI nr
Match: XP_023520682.1 (uncharacterized protein LOC111784085 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 380.9 bits (977), Expect = 2.6e-102 Identity = 192/200 (96.00%), Postives = 195/200 (97.50%), Query Frame = 0
BLAST of Carg22711-RA vs. NCBI nr
Match: XP_008443651.1 (PREDICTED: uncharacterized protein LOC103487198 [Cucumis melo] >XP_008443652.1 PREDICTED: uncharacterized protein LOC103487198 [Cucumis melo]) HSP 1 Score: 367.5 bits (942), Expect = 2.9e-98 Identity = 187/201 (93.03%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of Carg22711-RA vs. NCBI nr
Match: XP_022988278.1 (uncharacterized protein LOC111485576 [Cucurbita maxima]) HSP 1 Score: 366.3 bits (939), Expect = 6.6e-98 Identity = 185/200 (92.50%), Postives = 192/200 (96.00%), Query Frame = 0
BLAST of Carg22711-RA vs. TAIR10
Match: AT5G58110.1 (chaperone binding;ATPase activators) HSP 1 Score: 247.3 bits (630), Expect = 8.1e-66 Identity = 121/192 (63.02%), Postives = 161/192 (83.85%), Query Frame = 0
BLAST of Carg22711-RA vs. TrEMBL
Match: tr|A0A1S3B8I3|A0A1S3B8I3_CUCME (uncharacterized protein LOC103487198 OS=Cucumis melo OX=3656 GN=LOC103487198 PE=4 SV=1) HSP 1 Score: 367.5 bits (942), Expect = 2.0e-98 Identity = 187/201 (93.03%), Postives = 194/201 (96.52%), Query Frame = 0
BLAST of Carg22711-RA vs. TrEMBL
Match: tr|A0A0A0M014|A0A0A0M014_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G651680 PE=4 SV=1) HSP 1 Score: 362.1 bits (928), Expect = 8.2e-97 Identity = 184/201 (91.54%), Postives = 193/201 (96.02%), Query Frame = 0
BLAST of Carg22711-RA vs. TrEMBL
Match: tr|A0A2I4FPJ3|A0A2I4FPJ3_9ROSI (uncharacterized protein LOC109000956 isoform X1 OS=Juglans regia OX=51240 GN=LOC109000956 PE=4 SV=1) HSP 1 Score: 321.6 bits (823), Expect = 1.2e-84 Identity = 160/197 (81.22%), Postives = 177/197 (89.85%), Query Frame = 0
BLAST of Carg22711-RA vs. TrEMBL
Match: tr|A0A2P4INZ8|A0A2P4INZ8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_61054 PE=4 SV=1) HSP 1 Score: 316.2 bits (809), Expect = 5.2e-83 Identity = 158/193 (81.87%), Postives = 173/193 (89.64%), Query Frame = 0
BLAST of Carg22711-RA vs. TrEMBL
Match: tr|A0A067JV65|A0A067JV65_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_19791 PE=4 SV=1) HSP 1 Score: 313.2 bits (801), Expect = 4.4e-82 Identity = 156/189 (82.54%), Postives = 173/189 (91.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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