Carg07046 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAATTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGGTCCTCCTTTAAATTCACCCTCTTCAGTTCCTTTTATAAACTTTTTTTGTTTCGTTTGAATGAAGAGAATTCGATCAGAAGTTTTTTTTCTGGATGTTCGATGGATGGAAATGAGAAGAAATAAGGATTTTATTAATATAGCATTACTGTACCTAATTTGTGAAGGAAAACCAAATCCTGTAGAAATATTCTAGTTAGGATTTTAAATCCCTTCAAACCCTATAGAAACAAACAGAGGATTATTGATGATGATTTGGTTTTGATTGACTCGAAGAACGACATTTACAGCTAAATCTAATTCTGATTAGGTATTATTTTTCTGGCCTAAGGTGGAGGAATCAGGGCAATAGTAATTATGTTTAAAGAGTAATTGTTCGATTACTTAGAATCTTGCATTAAAAATGGTGAAGCCATGCTATAATTTTTGGCTTTGGGTGGATGTGAAAGCCTAGACCTATAAATTTCTTGATCCAGATTTGATATCCCATTGCTGAAGCTGCCTTCATGGGTGTTCTTTTCATCCAACTAATCTATTCTCTTTGCTTTTAACTTATATAGATCAACTCCATTGCCTTTAATTTTTCCCAACACAATCTGAGAATCTCTTTGGGCTTATATTATGATGCCTTTGCGCATACATGGCCAATGTAACAGCCCAGACCCACCGCTAGTAGATATTGTCTTCTTTGGACTTTCCCTTTCGAGTTTCCCCTCAGGGCTTTAAAACGCGTCTCCTAGGGGAAGGTTTCCACACCCTTATAAAGGTGTTTTGTTCTCCTCCCCAACCAACGTGGGACATCATAATCCAACCTCCTTCGGGACCCAGCGTCCTCATTGGCACTCATTCCTTTCTCCAATCGATGCGAGACCCCCGCCAAATCCACCCCCCTTTGGGACCCAACGTCCTTACTGGCACACCGCCTCGTGTCTACCCCCTTCGGGGAACAGCGAGAAGGCTAACACATCGTCCGGTGTCTGGCTCTGATACCATTTGTAACGGCCCAGACCCACCGCTAGCAAATATGTCCTCTTTGGGCTTTCCCTTTCGGGCTTCCCTCAAAACTTTAAAACGCGTCTCCTGGGGAAGGTTTCCACATCCTTGTAAAGGTGTTTTGTTCTCCTCCCCAACCAATGTGGGACATCACAGCCAATTTCCTCATCAATGATCTTTTTAAGCTCTTCAAGAATGACCTTCATTTGAATTGCGAGTCCCGAAGAGGTGCGATTGTGACACGTAAAAAAATCGAAAGATTCCTCCATGTTCTACGTTCTATCTATCGTTTAGCTGTACATATCATGGTTTTCTGTTTCCATTTCAAGTTGATGTTTTGTTATGCCTTTCTACATGCTGAATCCTGGAAAATATAGTAATCACACAACATACACACACATGTATGGAAATACTTGCGTTCATATGCAGACTGATGAACTTGTATTTTGTGGTGGTGATTTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGGTAAGTCTTATGATGAGATCCAAATGGTCAACTGGTCTGGTTATATAACTTATTTTGGTGTGTTATATTGCTGCCAACATTCAGTCTGTTTCTTCCTTGGGGGGCCTTTTGGGTTGAGGGCCATGCGCAGGGTCGTGCGCGGGGCCTTCTGGGTTGAGGGTCATGTGCGGGGTTCCTATCATAACCATTTCGAAACATGAGATTCTGAAAATCATGGCATTATATAAATGACATGTTAGCTGTAACAGCCCAAGCCCATTGCTAGCAGATATTGTGCTCTTTGGGCTTTTCCTTTCGAGATTCCTCAAGGTTTTTAAAACGTGTTTGCTAGGGAGAGGTTTCCACACCTTTATAAAGAATGTTTCGTTCTCCTCCCCAACCGACATGGGATCTCACATTATCTCTTTTGATTTTCAAATTATTTAGTGGCACTTTGACTCATCGAGCAAATGAACCATATTGTTAACATACTCGATCGATCGGTTGGAATACTAAACGTTTATTCAAATTTATGCAAATTTATGGACGTAGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGGTGAGTTAATTCAACCAACTCATGCATATTTCAGCATTAAATGGCAACCAGATTAACTAACCAAATCTATGAGGATTGATTGTGTTTATATGACCTGAATCATCATTTTCTATGCAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGTTTGTTTTTCTCAATAACCTTATTGTCTATGATAGGTTGATCCGAAATGAGTCGCAAAATAAATGGATCTTGGAAACTAGTTTCCCGTTTTATATTCACCTTACACATCCAAACACATTCTCATTCTCAAACTTGCATAATGTCAATCACTCACGAACATGTCGAGTAGGCTTTGACTAAGCATAGGAATGAACTTAAAACAAGATTTATCATAAACTCAATGTGGATAAGCAAGCAAATCCTAAAACTTGTTTTGAGTTTTCCTTAAATGTGTGTAAAACATGTTTGTTCATGAACACACCCATGGAATTTTGCCCCTTGTGGCTCGAAGCATTTCTTCTTAAGAAAGTTATGAAGCATGAAATGGGGTTTTCACAAAGTGATTGGCCACTAATTTATATACAATACACAGCTTAAGCGTTTTGATTCTAACCCAACCATACATCTAAAGCTTCTGAGGATTGCCATAATTTCCTGTTTCTGCAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGTAATGCTGCTGTCTCATCTGCAATAATGTTGTTGAAATTGTTTACTGAATAATAATAGCGTTATTGTTTGTAGGAAGCGTTCGTGGCGTTGTCATTAACAGTCTAAGGCTACAAAGGGAGCATTTAGATTGTCTTTATATGTACTCTCGTACTTAAAGGTTAGAGATTCGAATCTTACCTTCACATATTTTAAACTCAAGAGCATATATATAGATACACAAAGGCCCCCTACACTTTTCGTGTATATGTCTAAAATTAGTAACGATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGAAATCTCGCCAATTTCTTACACGGATATTTCTTATATATCAATCAACAAGTCAATTTAAATGAATGATACACATTAATTGTTGTATTAATTTTTATCCATCATTTTAATTAAAAAAAAAAATCTCAACATATATATTTTTAAACAATTTAAAATTTAATAACTAAAATAAAATATTTTGAACTCTATACCTAGTAAGGGTGTATACGGGTTGGGTTGAGAAAATCTTTTGGATTAGCCCAAAATTTTGGGTTGATTGGGTTAGTGACTTGAACAATCCGAGGTGAGTACATAACCCAACCCAATCCAGAGTTAGGTTGTCAAGTTGTTTTTTATTATTATATAATAAAATTCTACTTGTGCAACACTAACATTTGTTATTTGTATCAAATATTCTTAATTTTCATAATAATCTCAAAAGTACGAT ATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAATTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGGTAAGTCTTATGATGAGATCCAAATGGTCAACTGGTCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAAAGAGGTAGAAAAGGAAAGTTCTATATGAAGTGGTGAAGATGGAAGCGTTCGTGGCGTTGTCATTAACAGTCTAAGGCTACAAAGGGAGCATTTAGATTGTCTTTATATGTACTCTCGTACTTAAAGGTTAGAGATTCGAATCTTACCTTCACATATTTTAAACTCAAGAGCATATATATAGATACACAAAGGCCCCCTACACTTTTCGTGTATATGTCTAAAATTAGTAACGATTTAATTCATACCATAAATAATCTAAGCTAATGTGTAATGTGAAATCTCGCCAATTTCTTACACGGATATTTCTTATATATCAATCAACAAGTCAATTTAAATGAATGATACACATTAATTGTTGTATTAATTTTTATCCATCATTTTAATTAAAAAAAAAAATCTCAACATATATATTTTTAAACAATTTAAAATTTAATAACTAAAATAAAATATTTTGAACTCTATACCTAGTAAGGGTGTATACGGGTTGGGTTGAGAAAATCTTTTGGATTAGCCCAAAATTTTGGGTTGATTGGGTTAGTGACTTGAACAATCCGAGGTGAGTACATAACCCAACCCAATCCAGAGTTAGGTTGTCAAGTTGTTTTTTATTATTATATAATAAAATTCTACTTGTGCAACACTAACATTTGTTATTTGTATCAAATATTCTTAATTTTCATAATAATCTCAAAAGTACGAT ATGGATTCTTCGGCTAGAATCTCCTCCTTTGTTTTTCTCTCTCATCTCCTACTTTTGTTATGCTCTCTGGTTTCAATTTCGACTTCCAGGGCAACGGCAAGCCCTGATTACGGGAGTGAGAAAGTATCGCTTGATGTTTACTATGAATCGCTCTGTCCAGACAGCGTTAAATTTATAGTGGACAATCTGATCGAGTTGTTTGAGGGTGGACTCATCTCCATAGTTGATCTTAGATTCGTTCCCTACGGCAATGCGAGGATCAGTCGAAACAGTTCCATCACTTGTCAGCATGGTCCTAATGAATGTCTACTGAACACTGTGGAAGCCTGCGCTATTCATGCCTGGCCTGAGCTGGTAAGTCTTATGATGAGATCCAAATGGTCAACTGGTCTGACAGGGCATTTTCCTTTTATTTTCTGTGTGGAGGCTGCAGTGTATGAGCGGAAGTATACCCAATGGGAGACTTGCTTCGAGAAATTGGGATTGCATCCTAAGCCTGTTTATGATTGCTATTCTTCAGGACTTGGGAAAGAGCTTGAATTACAATATGCAGCTGAAACCAACAATCTTCAGCCTCCTCATAAATACGTTCCTTGGGTGGTTGTTGATGGACAACCGCTTTATGAGGACTTTGAAAACTTCGTGAGCTATATCTGTGCGGCGTATAAAGGTTCTTCTGTGCCAAGCGCATGTAGTAAAGCTAAATCCCTTAGTTCCATTTAA MDSSARISSFVFLSHLLLLLCSLVSISTSRATASPDYGSEKVSLDVYYESLCPDSVKFIVDNLIELFEGGLISIVDLRFVPYGNARISRNSSITCQHGPNECLLNTVEACAIHAWPELVSLMMRSKWSTGLTGHFPFIFCVEAAVYERKYTQWETCFEKLGLHPKPVYDCYSSGLGKELELQYAAETNNLQPPHKYVPWVVVDGQPLYEDFENFVSYICAAYKGSSVPSACSKAKSLSSI
BLAST of Carg07046 vs. NCBI nr
Match: XP_022949402.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949403.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata] >XP_022949404.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita moschata]) HSP 1 Score: 458.4 bits (1178), Expect = 1.5e-125 Identity = 226/240 (94.17%), Postives = 227/240 (94.58%), Query Frame = 0
BLAST of Carg07046 vs. NCBI nr
Match: XP_023523172.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo] >XP_023523173.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 452.2 bits (1162), Expect = 1.1e-123 Identity = 223/240 (92.92%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of Carg07046 vs. NCBI nr
Match: XP_022998319.1 (gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998320.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998321.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima] >XP_022998322.1 gamma-interferon-inducible lysosomal thiol reductase-like [Cucurbita maxima]) HSP 1 Score: 449.9 bits (1156), Expect = 5.4e-123 Identity = 221/240 (92.08%), Postives = 226/240 (94.17%), Query Frame = 0
BLAST of Carg07046 vs. NCBI nr
Match: XP_004145239.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis sativus] >KGN65848.1 hypothetical protein Csa_1G533550 [Cucumis sativus]) HSP 1 Score: 387.1 bits (993), Expect = 4.3e-104 Identity = 194/241 (80.50%), Postives = 206/241 (85.48%), Query Frame = 0
BLAST of Carg07046 vs. NCBI nr
Match: XP_008457320.1 (PREDICTED: gamma-interferon-inducible lysosomal thiol reductase-like [Cucumis melo]) HSP 1 Score: 381.7 bits (979), Expect = 1.8e-102 Identity = 191/241 (79.25%), Postives = 204/241 (84.65%), Query Frame = 0
BLAST of Carg07046 vs. TAIR10
Match: AT1G07080.1 (Thioredoxin superfamily protein) HSP 1 Score: 253.8 bits (647), Expect = 1.0e-67 Identity = 122/196 (62.24%), Postives = 143/196 (72.96%), Query Frame = 0
BLAST of Carg07046 vs. TAIR10
Match: AT5G01580.1 (gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 195.3 bits (495), Expect = 4.4e-50 Identity = 90/193 (46.63%), Postives = 126/193 (65.28%), Query Frame = 0
BLAST of Carg07046 vs. TAIR10
Match: AT4G12890.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 178.3 bits (451), Expect = 5.5e-45 Identity = 93/232 (40.09%), Postives = 136/232 (58.62%), Query Frame = 0
BLAST of Carg07046 vs. TAIR10
Match: AT4G12900.1 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 173.7 bits (439), Expect = 1.4e-43 Identity = 93/228 (40.79%), Postives = 132/228 (57.89%), Query Frame = 0
BLAST of Carg07046 vs. TAIR10
Match: AT4G12960.2 (Gamma interferon responsive lysosomal thiol (GILT) reductase family protein) HSP 1 Score: 168.7 bits (426), Expect = 4.4e-42 Identity = 91/230 (39.57%), Postives = 135/230 (58.70%), Query Frame = 0
BLAST of Carg07046 vs. Swiss-Prot
Match: sp|Q9SV73|GILT_ARATH (Gamma-interferon-responsive lysosomal thiol protein OS=Arabidopsis thaliana OX=3702 GN=GILT PE=2 SV=1) HSP 1 Score: 169.5 bits (428), Expect = 4.6e-41 Identity = 92/230 (40.00%), Postives = 135/230 (58.70%), Query Frame = 0
BLAST of Carg07046 vs. Swiss-Prot
Match: sp|O17861|YVRI_CAEEL (GILT-like protein F37H8.5 OS=Caenorhabditis elegans OX=6239 GN=F37H8.5 PE=1 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 6.9e-21 Identity = 62/208 (29.81%), Postives = 102/208 (49.04%), Query Frame = 0
BLAST of Carg07046 vs. Swiss-Prot
Match: sp|Q499T2|GILT_RAT (Gamma-interferon-inducible lysosomal thiol reductase OS=Rattus norvegicus OX=10116 GN=Ifi30 PE=2 SV=1) HSP 1 Score: 101.7 bits (252), Expect = 1.2e-20 Identity = 68/203 (33.50%), Postives = 101/203 (49.75%), Query Frame = 0
BLAST of Carg07046 vs. Swiss-Prot
Match: sp|A6QPN6|GILT_BOVIN (Gamma-interferon-inducible lysosomal thiol reductase OS=Bos taurus OX=9913 GN=IFI30 PE=2 SV=1) HSP 1 Score: 100.1 bits (248), Expect = 3.4e-20 Identity = 71/225 (31.56%), Postives = 107/225 (47.56%), Query Frame = 0
BLAST of Carg07046 vs. Swiss-Prot
Match: sp|P13284|GILT_HUMAN (Gamma-interferon-inducible lysosomal thiol reductase OS=Homo sapiens OX=9606 GN=IFI30 PE=1 SV=3) HSP 1 Score: 99.0 bits (245), Expect = 7.7e-20 Identity = 70/206 (33.98%), Postives = 98/206 (47.57%), Query Frame = 0
BLAST of Carg07046 vs. TrEMBL
Match: tr|A0A0A0LVM7|A0A0A0LVM7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533550 PE=4 SV=1) HSP 1 Score: 387.1 bits (993), Expect = 2.9e-104 Identity = 194/241 (80.50%), Postives = 206/241 (85.48%), Query Frame = 0
BLAST of Carg07046 vs. TrEMBL
Match: tr|A0A1S3C5X1|A0A1S3C5X1_CUCME (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497041 PE=4 SV=1) HSP 1 Score: 381.7 bits (979), Expect = 1.2e-102 Identity = 191/241 (79.25%), Postives = 204/241 (84.65%), Query Frame = 0
BLAST of Carg07046 vs. TrEMBL
Match: tr|A0A0A0LXR3|A0A0A0LXR3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G533560 PE=4 SV=1) HSP 1 Score: 321.2 bits (822), Expect = 1.9e-84 Identity = 155/240 (64.58%), Postives = 191/240 (79.58%), Query Frame = 0
BLAST of Carg07046 vs. TrEMBL
Match: tr|A0A1S3C735|A0A1S3C735_CUCME (gamma-interferon-inducible lysosomal thiol reductase-like OS=Cucumis melo OX=3656 GN=LOC103497224 PE=4 SV=1) HSP 1 Score: 306.2 bits (783), Expect = 6.4e-80 Identity = 150/234 (64.10%), Postives = 180/234 (76.92%), Query Frame = 0
BLAST of Carg07046 vs. TrEMBL
Match: tr|D7SJS7|D7SJS7_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_06s0004g07110 PE=4 SV=1) HSP 1 Score: 294.3 bits (752), Expect = 2.5e-76 Identity = 142/227 (62.56%), Postives = 174/227 (76.65%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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