Carg06866 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.GAAGTCTTTGAACCCAATCTACCTGATTTTTCCAGAGCGTAGGGTATTACAACCTCATTTCGACATCCTGTAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGAGATTATCATGTACCGTCCATCTCTTTCTTCTCTATATCTATCTTTTTGGAAAAAGTAATTAGCTTAGGAAATTTTCTTGATCATTCAATGTTATGTATTCCACTGCTAATCTGTTCTTTGTTAACGAGTTCTCCGTTTCGCTTTCAATTTTTAAACCTTCTTCCCGCTAGAATTTTTTAGTTCATTGTTGGAACGTCGCCTGCCACCCGGGATTAGGACGGATTGGGCTGTTCTTGCTGTTTGCGAGAGATAACTTGGCCACTGTTTGTTTGGTTCAAAAGAAAAGTGATATTATTCTAAAATAATTGTTTGTCAAATTGTCATCGATTACTTGCGAAGAAGAATCTGCTTGAATTTATTACTGATAGTTGAAGTACAAGAGACTATTGATTGCTGCGCTGATGAAGTACGAACTTAATTTCTTACATCATGATTGCACCCTTCTGCACGGGAAGTAATGTTAATAGCGAACTTTGTTTCCATTTGATTAACAGCAAACTCTAATTTTTATTGTCTTATTGAATCTTTAGCTTCTTTTCCCTCTTTGATAGATCAACTATATTGTGCTAAAATAAAAACTTTTGAATGGAAGGATGAGACATATCTGAGAAGGATATATGTGCATCAGCCATATGATTGACTTTGATAAACTTGTCAATGATGCTCATTTTTCTGGTGATGGATGCGTCAATTTTTAGTGGGAAAACAGAGAGCTAAAATTTGTTTGTCTTTTATTTAGATGTTTTACCAATCATGAAACAAGAAATTAACTAAGACTAGGGGAAGCTTCTAATTCAACTTCAACCACTTGCACTGAGACTAAAATGGAGTTCAAAAAGTTTAGTTGAATGATACATATAAAACTCTATGAACTAGATTGTGAAGTTTTTTCTGTTCTCATTAAGGGTATGTTACAATTATTAGTAGCATAGGTATCCATCCATTTTGTTAAAAATCTCGTATGATTTTCAGGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGGTTAATTAAATGCTTTGCCCTTACTTCCTGTCCTTTTCGCATGTTCTTGTTGCTGGTTAATTAAATAATGAATGTTGTCTTGTTTATAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCGAAGGATCAAGGATCTGACCTACATGGTATTTTATCTTGAAAATATAACTTTTTTTCTCTTGTTCCAAATTAACATTTTAAAAGTGATTAAATATATTTGATTTGCTTTAAGGAACCATGAAACCCCTTTTTTCCTAGGATAACATACATTTGTTCTCAAATCGCTTATGAAGTTATCCTTTCTGGTTTTAGTAGATAGTATCTGTTCAGTGGCCCAGACAACGAAAGCTTCCTATTTTTCCTAGAATTTTAAATATAAGTTCGGCTAATATTACATTTTTGGGATGACTGATAACAGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTATGAGCTTCTTCTATTTCTTTTTCAAGTGTTACATTTTTATCTAAATTAGGGTATAAAACCCCTAGAGTTACTCGGTTATCCTTTTCTGGTACAAGTCCTCGTGTTTATGTTTATAACTCATTAATTACAATCTATATGACAAAAATGGAAGTTCACCAAAAAAAAATTTCGTCTGCTTAAATTCTAGTCGTGCCTTTACAATATTATAATTTGTCAACGCATTTTGATCTGAATTTGTCCATTTTTTGCGAAATTAATCATATGCAACTGATTAGTTACTTTTTTTTTTTTTTTTTTTTTCTTTTGATGCGATGTAAGACTAATGCGTATATTCAGTTTCAGATTTGGTTAAATCGTTGAATGCAAATGAGCATCACTTTAACATAAATGCAAATATCTGGGTTTCTCAACAAATTCCATCTTGATGGTGCATTGCATTATACTTTCATTTGAATGTGAAAGAACAATGTTTATATTTGTATCTAACAGCTTGTTGTTTGCTTATTCATTACACGCAGGTGGGAAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTAAGTCATTCAGAACATGTCGTGCAATTAGATATTTAGTTTTTCATCCTCCATTGACATTAGAATGAAAATCCTATAATCAATATGACTACAGGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTATGGTTTTCTCCTTAATAAGTCTTGTATTGCATATATCATCTTCTCTCCATAGACCACATTGTGCAAGTCTGATTCAATTACTAACAAGGATTTGGAACAGATAAAATCTTGTTTTCAAGGGATCTGCAAACACTCTCTTTCACATACATTTTTACTCTGTGGCTTGACCGTAGTTTAAAACTTCTATGCATTTTTACTCGATACAATATGATCTGACAATATCTTTTTCGATAAGAGAAATAATTTCATTGATAAATGAAATAGGTGGCGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATGACATGATAATATCTCTACCATTCCGACCACCTACACAAAAGGGATAAATAATAACCTCTCCAAATCATGGGAGGACTCACATCCATAAATTTTGGTACTTAATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTTGAACCCGATGGCCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACTTTTGCCAAATCCACATT GAAGTCTTTGAACCCAATCTACCTGATTTTTCCAGAGCGTAGGGTATTACAACCTCATTTCGACATCCTGTAGATCCAATTGCAACTATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGAGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCGAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTGGGAAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAGTATGGTTTTCTCCTTAATAAGTCTTGTATTGCATATATCATCTTCTCTCCATAGACCACATTGTGCAAGTCTGATTCAATTACTAACAAGGATTTGGAACAGATAAAATCTTGTTTTCAAGGGATCTGCAAACACTCTCTTTCACATACATTTTTACTCTGTGGCTTGACCGTAGTTTAAAACTTCTATGCATTTTTACTCGATACAATATGATCTGACAATATCTTTTTCGATAAGAGAAATAATTTCATTGATAAATGAAATAGGTGGCGTCGAGAATTCCAACGCCAATAGGTGAATTTCAAGAAAGTTTTCCATGACATGATAATATCTCTACCATTCCGACCACCTACACAAAAGGGATAAATAATAACCTCTCCAAATCATGGGAGGACTCACATCCATAAATTTTGGTACTTAATGACAGACAATAGTTATGTTGTTTGAGATATGGGCTGCATCATATTCAGCCAGATAAAATAGTATAGAAACTATAAGAAAGCTTCCTGAAGTGAAACCCTTCATTATTCGTTCAATGTAAGGTGTAAATGTATGAGTAATAAGATGTGTCACATCTTGGAAGCATCGGCTGCAAGTTGGTTGAAGGCAATGGAAGTCTTTGAACCCGATGGCCGCCCCAAATGGTTGCTGATGAAGTTCCCAGCAGACATGACTTTTGCCAAATCCACATT ATGGACGAGTCCGAATTTCGTCGACTTCTTCAACTCTTTCCCGTTGTTCGATCTCGAGATTATCATGCGGAGTCGGAGTTATCTAGACAGTCAACATCCAAGTCATCCAAGAGTGAGTTGAGTGAATGGCAGGAAGCATGGAATGAAGATGGAGAAAAATCGAAGGATCAAGGATCTGACCTACATGATGCATTCTGGAAGAAGCTAAAGTTCGCTGCTGAGCAGAAGGTGGGAAAGCTTGAAGCAGAGAGATTCTGTAACTCATTTCAACAGATTCACAATAAACTTGTTAACGAAGAACTGAGTTCAGATGCTGCCCGGAGCTTTCTGGAGTCGTTCAGTTGCAGTTCCACAGAATAG MDESEFRRLLQLFPVVRSRDYHAESELSRQSTSKSSKSELSEWQEAWNEDGEKSKDQGSDLHDAFWKKLKFAAEQKVGKLEAERFCNSFQQIHNKLVNEELSSDAARSFLESFSCSSTE
BLAST of Carg06866 vs. NCBI nr
Match: XP_022944774.1 (uncharacterized protein LOC111449126 isoform X1 [Cucurbita moschata]) HSP 1 Score: 229.6 bits (584), Expect = 5.7e-57 Identity = 119/119 (100.00%), Postives = 119/119 (100.00%), Query Frame = 0
BLAST of Carg06866 vs. NCBI nr
Match: XP_023512799.1 (uncharacterized protein LOC111777433 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 226.1 bits (575), Expect = 6.3e-56 Identity = 117/119 (98.32%), Postives = 118/119 (99.16%), Query Frame = 0
BLAST of Carg06866 vs. NCBI nr
Match: XP_022985668.1 (uncharacterized protein LOC111483657 isoform X1 [Cucurbita maxima]) HSP 1 Score: 219.5 bits (558), Expect = 5.9e-54 Identity = 114/119 (95.80%), Postives = 116/119 (97.48%), Query Frame = 0
BLAST of Carg06866 vs. NCBI nr
Match: XP_022944775.1 (uncharacterized protein LOC111449126 isoform X2 [Cucurbita moschata]) HSP 1 Score: 213.0 bits (541), Expect = 5.5e-52 Identity = 114/119 (95.80%), Postives = 114/119 (95.80%), Query Frame = 0
BLAST of Carg06866 vs. NCBI nr
Match: XP_023512800.1 (uncharacterized protein LOC111777433 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 209.5 bits (532), Expect = 6.1e-51 Identity = 112/119 (94.12%), Postives = 113/119 (94.96%), Query Frame = 0
BLAST of Carg06866 vs. TAIR10
Match: AT5G12240.1 (unknown protein) HSP 1 Score: 79.7 bits (195), Expect = 1.3e-15 Identity = 63/165 (38.18%), Postives = 80/165 (48.48%), Query Frame = 0
BLAST of Carg06866 vs. TrEMBL
Match: tr|A0A1S3BLU6|A0A1S3BLU6_CUCME (uncharacterized protein LOC103491458 OS=Cucumis melo OX=3656 GN=LOC103491458 PE=4 SV=1) HSP 1 Score: 203.0 bits (515), Expect = 3.8e-49 Identity = 106/119 (89.08%), Postives = 110/119 (92.44%), Query Frame = 0
BLAST of Carg06866 vs. TrEMBL
Match: tr|A0A0A0KGZ6|A0A0A0KGZ6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429090 PE=4 SV=1) HSP 1 Score: 191.8 bits (486), Expect = 8.7e-46 Identity = 102/119 (85.71%), Postives = 107/119 (89.92%), Query Frame = 0
BLAST of Carg06866 vs. TrEMBL
Match: tr|A0A2P4KRV8|A0A2P4KRV8_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_43435 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 2.7e-31 Identity = 79/115 (68.70%), Postives = 98/115 (85.22%), Query Frame = 0
BLAST of Carg06866 vs. TrEMBL
Match: tr|A0A2P6QEQ7|A0A2P6QEQ7_ROSCH (Uncharacterized protein OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0048901 PE=4 SV=1) HSP 1 Score: 142.1 bits (357), Expect = 7.9e-31 Identity = 79/115 (68.70%), Postives = 94/115 (81.74%), Query Frame = 0
BLAST of Carg06866 vs. TrEMBL
Match: tr|A0A2P5CEV5|A0A2P5CEV5_9ROSA (Octanoyltransferase OS=Trema orientalis OX=63057 GN=TorRG33x02_287710 PE=4 SV=1) HSP 1 Score: 141.0 bits (354), Expect = 1.8e-30 Identity = 77/113 (68.14%), Postives = 91/113 (80.53%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
|