Carg06865-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CCACTTTTCTTTCTCCTCTTCTTATTTTCACTCTCTGCTGCAACCTTACGCCGCCACGCCAACCCCATCTTCTGCTGCAGCCCCCCATCAATCGGTCGGCTACCTTCAAAACTTGCTTGGATCAATTTTTTTTTTCTTTTTATTTCTTCGATTCAACCAAATTTGATTTAAAATATGATGCATTTTGAATTAGGCCAGTTTTGATTCAAAATTCTGCCAAATTTCATCTATTTTGGATGGAGATTTCTTTGTTTCTCCCTTTCTTTCCCGCAGTTTGTTTTCAATTTTATCTTGTGTTCTGTTTTCTATCTGTTTTTTCCCTTGGTATCGTCATTTATTCTTCTTGACCTCGAAGTTCTTTGCTTCTCAGTGATAAGATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGATGGATATGGAACCTGTAATGAACATGCGAAATATTAAGAAAGAAATTGAATTCCTCAGTAATTTCTCTTTTCCCCCTCAGAATTCAGCTCATTATTTGTGCATATATCTTTAGAGGGAGTTTCATTATTTCAATCGACGTTAAGAGATTAGTTTCTTTCTGAAATTATAGAGTATGTATGAAAGCCTTGGGTTCAATTTTCTCCTATTTTCTGGTTTTATGTGCCGTTATGATACGCGTGGAGTTTTACATTTGAAGAAAATATACCACAAATCTTATATGTCACATTGATTTTTCTATTTTGTGTACACTGATGGAAAACACAGAAACTATTTTATTTCAACGAAATCAATGGTTTAATTATTTCTTTCAATTGAGAATCTTTATATATTATTAGACTTTTATCAAAGAAGGATATGGTAGAGAATGAATCTTCTGAGCCTGTTAGAAATGTATGTCTGTACTAATTAATGTAGTGCTGGTGTAATATACTGAAGAGCTTTGGTCGTTTGGCTTTAGTGGCCGCTCATATTTGAGATTTGAGTCAAGATCCAAAGGAACTGAATAGATGTTGAAACTGTATGTAACTTGCATCCTCGCATTTCCTTTCAGATTCCATTTGTGTACAAGCTACTTTTTAAACATCTTCATGATCACACCTTTCCATAAGGTAGCTTCCCCGCTTTGACTTTAGATCCTTCCTCTGGTCTTATATCAATATTTATTGACCAAAATGTTTAGTAATTGTTTTGAATGATGTTTGTTTGTAAAGCCTCACCCTTTGTTCTGGGAAAATTTATAGTGCTATGACGTTCTTCTTCATACTCATTTCATTCCATATTTGTCATGTCATAGACGATGTATTACTTCATTTAATAGACTTAGACCCCACACCATTCTTAAATGCTTATGTTATGGCAAATATGCAAACAATGAATGGAGGTAGTTTGGAAATTTTCCATACTACCCTAGACTGTAGTACTAGAAAATTTCCCTGTGTGTGTGTGTGCAGTTTTTGGGTAATGAATATAAAAGGAGCAAGTATGAAGTAGCTAATTTGGTTTTTTGTTCTTTATATCAGCCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGGTACTATTACAAACTATGGATATGTTATTATGGTAAGCTGAATGAATGTAATTTATAAAGCTTACATCTGACTCTTGTGTTTACCATCGTGCAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGGTAAGGAAATCCATAAGATGGGTTACTTTGCTTTTTTCTTTTCTTTTGCCTACATCCACTCCTGTTGTTTGCAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAGAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGAAATCATTCATCACCTACAACATTCCTGTTTTACAATGGAATATGGATATCCTTTTGTCATATCAGATGCAATTCAATGAAATCTTGCATACCCTTGTTTTGCATATAAATTTATTACGTCCATCTATCCATTGAATGAAATTTTTATTTTGATTTTGTTTTTTTGTTGGATTGGAACCCATTTGTACTTTTCGGCTTCATCTTGCCTTTTTACTTTTTTGTCGAGCTCCATCTTCTTTGTCGGGAAAGCATGAAAGACGCATTTTAAAGCCTTGAGAGAAAGCTTGAAAGGGAAAGCCCAATCTGTGATATCCCACATTGGTTGGAGAGGAGAATGAAACACCAGAGTGTGAAAACCTTTCTCTAGCAGACCTTTC CCACTTTTCTTTCTCCTCTTCTTATTTTCACTCTCTGCTGCAACCTTACGCCGCCACGCCAACCCCATCTTCTGCTGCAGCCCCCCATCAATCGTGATAAGATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGATGGATATGGAACCTGTAATGAACATGCGAAATATTAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAGAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGAAATCATTCATCACCTACAACATTCCTGTTTTACAATGGAATATGGATATCCTTTTGTCATATCAGATGCAATTCAATGAAATCTTGCATACCCTTGTTTTGCATATAAATTTATTACGTCCATCTATCCATTGAATGAAATTTTTATTTTGATTTTGTTTTTTTGTTGGATTGGAACCCATTTGTACTTTTCGGCTTCATCTTGCCTTTTTACTTTTTTGTCGAGCTCCATCTTCTTTGTCGGGAAAGCATGAAAGACGCATTTTAAAGCCTTGAGAGAAAGCTTGAAAGGGAAAGCCCAATCTGTGATATCCCACATTGGTTGGAGAGGAGAATGAAACACCAGAGTGTGAAAACCTTTCTCTAGCAGACCTTTC ATGCATTCCAGAGATAAAAGTGCAAAAGCGGGATCATCTAGGAACTCGATGGATATGGAACCTGTAATGAACATGCGAAATATTAAGAAAGAAATTGAATTCCTCACCTCCTCTCATATGTCATGGAAAGACAAAAAGGAGATTGAGAGTAGGAAAATTGTTTCTTTGGGTGGAAAGCCTCAAAAGAAACAAAGATTGCCTCTAAGTGTAGCACGACCAATCATGAAGAAGCAGAAGGAAAGAGAACAAAAGATGGTACAAGAGCATTGGAATGTTAGTCAATTTGGCGGGACGGCTAGTAGTAACCACTCTAGAAACTCGTTGGGGAAGCGCAAACCCGAGAACCAGGTTCTTAAGTCGAGTGAAGGCTTTTTCAAACACGGTGTGCTTGATGTCAAGCATCTACTACGCCCAGCTCCTTCTAGGAATAGTGACTTCGGAAACGAAATGGCCGGCAAAGGTAGAAGAAAAGGAGGGAAAAAGAAGAACAACAAAAGTAACAAAAAGGGTGGCGGTAAGAAGCGCCATTGA MHSRDKSAKAGSSRNSMDMEPVMNMRNIKKEIEFLTSSHMSWKDKKEIESRKIVSLGGKPQKKQRLPLSVARPIMKKQKEREQKMVQEHWNVSQFGGTASSNHSRNSLGKRKPENQVLKSSEGFFKHGVLDVKHLLRPAPSRNSDFGNEMAGKGRRKGGKKKNNKSNKKGGGKKRH
BLAST of Carg06865-RA vs. NCBI nr
Match: XP_022944773.1 (uncharacterized protein LOC111449125 [Cucurbita moschata]) HSP 1 Score: 301.2 bits (770), Expect = 2.3e-78 Identity = 154/155 (99.35%), Postives = 154/155 (99.35%), Query Frame = 0
BLAST of Carg06865-RA vs. NCBI nr
Match: XP_023511857.1 (uncharacterized protein LOC111776750 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 295.4 bits (755), Expect = 1.3e-76 Identity = 151/155 (97.42%), Postives = 152/155 (98.06%), Query Frame = 0
BLAST of Carg06865-RA vs. NCBI nr
Match: XP_022985670.1 (uncharacterized protein LOC111483659 [Cucurbita maxima]) HSP 1 Score: 292.7 bits (748), Expect = 8.1e-76 Identity = 150/155 (96.77%), Postives = 151/155 (97.42%), Query Frame = 0
BLAST of Carg06865-RA vs. NCBI nr
Match: XP_004140183.1 (PREDICTED: uncharacterized protein LOC101203308 [Cucumis sativus] >KGN48078.1 hypothetical protein Csa_6G429080 [Cucumis sativus]) HSP 1 Score: 219.9 bits (559), Expect = 6.7e-54 Identity = 123/167 (73.65%), Postives = 127/167 (76.05%), Query Frame = 0
BLAST of Carg06865-RA vs. NCBI nr
Match: XP_008449630.1 (PREDICTED: uncharacterized protein LOC103491457 [Cucumis melo]) HSP 1 Score: 217.2 bits (552), Expect = 4.3e-53 Identity = 122/166 (73.49%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of Carg06865-RA vs. TAIR10
Match: AT2G44820.2 (unknown protein) HSP 1 Score: 117.9 bits (294), Expect = 6.5e-27 Identity = 64/123 (52.03%), Postives = 85/123 (69.11%), Query Frame = 0
BLAST of Carg06865-RA vs. TrEMBL
Match: tr|A0A0A0KEY3|A0A0A0KEY3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G429080 PE=4 SV=1) HSP 1 Score: 219.9 bits (559), Expect = 4.4e-54 Identity = 123/167 (73.65%), Postives = 127/167 (76.05%), Query Frame = 0
BLAST of Carg06865-RA vs. TrEMBL
Match: tr|A0A1S3BNE0|A0A1S3BNE0_CUCME (uncharacterized protein LOC103491457 OS=Cucumis melo OX=3656 GN=LOC103491457 PE=4 SV=1) HSP 1 Score: 217.2 bits (552), Expect = 2.9e-53 Identity = 122/166 (73.49%), Postives = 126/166 (75.90%), Query Frame = 0
BLAST of Carg06865-RA vs. TrEMBL
Match: tr|A0A251K3X9|A0A251K3X9_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_09G068000 PE=4 SV=1) HSP 1 Score: 163.3 bits (412), Expect = 4.9e-37 Identity = 80/132 (60.61%), Postives = 109/132 (82.58%), Query Frame = 0
BLAST of Carg06865-RA vs. TrEMBL
Match: tr|I1J561|I1J561_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100819044 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.3e-36 Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 0
BLAST of Carg06865-RA vs. TrEMBL
Match: tr|A0A0B2PZK2|A0A0B2PZK2_GLYSO (Uncharacterized protein OS=Glycine soja OX=3848 GN=glysoja_027159 PE=4 SV=1) HSP 1 Score: 159.1 bits (401), Expect = 9.3e-36 Identity = 91/160 (56.88%), Postives = 115/160 (71.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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