Carg26920 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCTCAAATTGCTAAGGTCTCACAGAAGGTGCAGCTCAGATCTTCTGGTCACAAGTTCTATGAACTCCTTAAGAACAAAATGGACTTTGTCTTTCAAATGTTCCCTGACGTTTATAAGAGCTGGAAGGTTTTGGAAGGAAATGGTTTGGCTCATGGCAGCATCATCCACTTAAAATATAACGTTGGTGAGTATCTTTTTATCATCGTTTTAATCGATTTTGTATTGTTTAGAGTTAACCAATTAAACTATGTTTAAATTTAGATGGCCCGTCAGAGGCAAAGGAGAGGCTAGCTATTGATGATGCGAACAAATCGATAACTTTTGAGTGCCTTGAAGGAGATCTATTCAGAGATTTTGAAGTTTTCAAATTGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGTGCTCAACTAATTGGTCCATTGAATATGTGAAGGCCAATGAAGATGTGGCTCCACCACATAACTATCTCATAATTGCAGCTAAAATTAGCAAAGGCATTGATGATTACCTTTGCAAGAACTGA ATGGCTCAAATTGCTAAGGTCTCACAGAAGGTGCAGCTCAGATCTTCTGGTCACAAGTTCTATGAACTCCTTAAGAACAAAATGGACTTTGTCTTTCAAATGTTCCCTGACGTTTATAAGAGCTGGAAGGTTTTGGAAGGAAATGGTTTGGCTCATGGCAGCATCATCCACTTAAAATATAACGTTGATGGCCCGTCAGAGGCAAAGGAGAGGCTAGCTATTGATGATGCGAACAAATCGATAACTTTTGAGTGCCTTGAAGGAGATCTATTCAGAGATTTTGAAGTTTTCAAATTGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGTGCTCAACTAATTGGTCCATTGAATATGTGAAGGCCAATGAAGATGTGGCTCCACCACATAACTATCTCATAATTGCAGCTAAAATTAGCAAAGGCATTGATGATTACCTTTGCAAGAACTGA ATGGCTCAAATTGCTAAGGTCTCACAGAAGGTGCAGCTCAGATCTTCTGGTCACAAGTTCTATGAACTCCTTAAGAACAAAATGGACTTTGTCTTTCAAATGTTCCCTGACGTTTATAAGAGCTGGAAGGTTTTGGAAGGAAATGGTTTGGCTCATGGCAGCATCATCCACTTAAAATATAACGTTGATGGCCCGTCAGAGGCAAAGGAGAGGCTAGCTATTGATGATGCGAACAAATCGATAACTTTTGAGTGCCTTGAAGGAGATCTATTCAGAGATTTTGAAGTTTTCAAATTGAAAATTGAAGTTGTTGAGAATGGTAGCAATGGGTGCTCAACTAATTGGTCCATTGAATATGTGAAGGCCAATGAAGATGTGGCTCCACCACATAACTATCTCATAATTGCAGCTAAAATTAGCAAAGGCATTGATGATTACCTTTGCAAGAACTGA MAQIAKVSQKVQLRSSGHKFYELLKNKMDFVFQMFPDVYKSWKVLEGNGLAHGSIIHLKYNVDGPSEAKERLAIDDANKSITFECLEGDLFRDFEVFKLKIEVVENGSNGCSTNWSIEYVKANEDVAPPHNYLIIAAKISKGIDDYLCKN
BLAST of Carg26920 vs. NCBI nr
Match: XP_022935319.1 (kirola-like [Cucurbita moschata]) HSP 1 Score: 309.3 bits (791), Expect = 7.1e-81 Identity = 149/150 (99.33%), Postives = 150/150 (100.00%), Query Frame = 0
BLAST of Carg26920 vs. NCBI nr
Match: XP_023528799.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 299.7 bits (766), Expect = 5.7e-78 Identity = 145/150 (96.67%), Postives = 149/150 (99.33%), Query Frame = 0
BLAST of Carg26920 vs. NCBI nr
Match: XP_023528288.1 (kirola-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 270.0 bits (689), Expect = 4.8e-69 Identity = 126/150 (84.00%), Postives = 137/150 (91.33%), Query Frame = 0
BLAST of Carg26920 vs. NCBI nr
Match: XP_022982737.1 (kirola-like [Cucurbita maxima]) HSP 1 Score: 266.2 bits (679), Expect = 6.9e-68 Identity = 123/150 (82.00%), Postives = 138/150 (92.00%), Query Frame = 0
BLAST of Carg26920 vs. NCBI nr
Match: XP_022935144.1 (kirola-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 261.2 bits (666), Expect = 2.2e-66 Identity = 121/150 (80.67%), Postives = 136/150 (90.67%), Query Frame = 0
BLAST of Carg26920 vs. TAIR10
Match: AT1G70850.1 (MLP-like protein 34) HSP 1 Score: 89.4 bits (220), Expect = 2.1e-18 Identity = 50/141 (35.46%), Postives = 82/141 (58.16%), Query Frame = 0
BLAST of Carg26920 vs. TAIR10
Match: AT1G70830.1 (MLP-like protein 28) HSP 1 Score: 83.2 bits (204), Expect = 1.5e-16 Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of Carg26920 vs. TAIR10
Match: AT1G70840.1 (MLP-like protein 31) HSP 1 Score: 80.9 bits (198), Expect = 7.5e-16 Identity = 44/145 (30.34%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Carg26920 vs. TAIR10
Match: AT1G70880.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 79.7 bits (195), Expect = 1.7e-15 Identity = 47/144 (32.64%), Postives = 79/144 (54.86%), Query Frame = 0
BLAST of Carg26920 vs. TAIR10
Match: AT1G23120.1 (Polyketide cyclase/dehydrase and lipid transport superfamily protein) HSP 1 Score: 77.0 bits (188), Expect = 1.1e-14 Identity = 41/148 (27.70%), Postives = 76/148 (51.35%), Query Frame = 0
BLAST of Carg26920 vs. Swiss-Prot
Match: sp|Q9SSK7|MLP34_ARATH (MLP-like protein 34 OS=Arabidopsis thaliana OX=3702 GN=MLP34 PE=2 SV=1) HSP 1 Score: 89.4 bits (220), Expect = 3.8e-17 Identity = 50/141 (35.46%), Postives = 82/141 (58.16%), Query Frame = 0
BLAST of Carg26920 vs. Swiss-Prot
Match: sp|P85524|KIRO_ACTDE (Kirola OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 89.0 bits (219), Expect = 5.0e-17 Identity = 47/146 (32.19%), Postives = 81/146 (55.48%), Query Frame = 0
BLAST of Carg26920 vs. Swiss-Prot
Match: sp|Q9SSK9|MLP28_ARATH (MLP-like protein 28 OS=Arabidopsis thaliana OX=3702 GN=MLP28 PE=1 SV=1) HSP 1 Score: 83.2 bits (204), Expect = 2.7e-15 Identity = 48/147 (32.65%), Postives = 81/147 (55.10%), Query Frame = 0
BLAST of Carg26920 vs. Swiss-Prot
Match: sp|Q06394|ML146_PAPSO (Major latex protein 146 OS=Papaver somniferum OX=3469 GN=MLP146 PE=2 SV=1) HSP 1 Score: 81.6 bits (200), Expect = 7.9e-15 Identity = 42/147 (28.57%), Postives = 76/147 (51.70%), Query Frame = 0
BLAST of Carg26920 vs. Swiss-Prot
Match: sp|Q941R6|MLP31_ARATH (MLP-like protein 31 OS=Arabidopsis thaliana OX=3702 GN=MLP31 PE=2 SV=2) HSP 1 Score: 80.9 bits (198), Expect = 1.4e-14 Identity = 44/145 (30.34%), Postives = 81/145 (55.86%), Query Frame = 0
BLAST of Carg26920 vs. TrEMBL
Match: tr|A0A1S3C4L4|A0A1S3C4L4_CUCME (major latex protein 149-like OS=Cucumis melo OX=3656 GN=LOC103496825 PE=4 SV=1) HSP 1 Score: 228.4 bits (581), Expect = 1.1e-56 Identity = 104/151 (68.87%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Carg26920 vs. TrEMBL
Match: tr|A0A0A0LA22|A0A0A0LA22_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G331340 PE=4 SV=1) HSP 1 Score: 227.6 bits (579), Expect = 1.8e-56 Identity = 106/151 (70.20%), Postives = 125/151 (82.78%), Query Frame = 0
BLAST of Carg26920 vs. TrEMBL
Match: tr|A0A0A0LCM8|A0A0A0LCM8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G333840 PE=4 SV=1) HSP 1 Score: 223.8 bits (569), Expect = 2.6e-55 Identity = 102/151 (67.55%), Postives = 126/151 (83.44%), Query Frame = 0
BLAST of Carg26920 vs. TrEMBL
Match: tr|A0A0A0L9D7|A0A0A0L9D7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G219190 PE=4 SV=1) HSP 1 Score: 218.0 bits (554), Expect = 1.4e-53 Identity = 101/151 (66.89%), Postives = 122/151 (80.79%), Query Frame = 0
BLAST of Carg26920 vs. TrEMBL
Match: tr|A0A1S3CQL5|A0A1S3CQL5_CUCME (MLP-like protein 28 OS=Cucumis melo OX=3656 GN=LOC103503185 PE=4 SV=1) HSP 1 Score: 176.0 bits (445), Expect = 6.2e-41 Identity = 84/153 (54.90%), Postives = 115/153 (75.16%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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