Carg26183 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: five_prime_UTRexonpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCTTCACATTCCTCCCTTCCTCCCATTTCCAGCTACACCCCGCACCGTCGCACGCCGCTCCTGCCCGACGAAGTCTCAGCCTCCCGACATACTCGCCGCCGCTCCCTTCCTCCCTCTTACTTACACTCTCTCGTTTCTCTGAGCAATCAGAGTTAGTTATCTCTGTTGTTTTCTTCTTTCTCAGAAATATATAACAGCGGTTCAGTCAGTCACAACTCACGCTGCTGGTGAGGTCCGGTCGCCCCTCATTTTTCAGATCCAGCGCCAAGGTTTTGATTTTTTGTTTCATTTTTATTTCGTTTGGTTGATTTATTATGTTCCCTCACGAAGAAGAATCAACGAATTGATTTTTTTTTTTTTTTTTTTTTTGTTGATATCTTCTTCAGCCAATGTTCATTCAATCCAAATGAAGACGTAAAACTAAAAATACTTCACATGTTAGAAGAAAAAACAGATTGAATCAATAGATTAAAAAAAAGATAGTATTCTTATCCGATTTAAGAAATAAAAAGAAAAAGAATTGAGAAGATGAAGCAAGCAAGAAAGAAACTCACCTTTGGTTTGCTTGGCAATAAAAAAAAAAAAACTTGTTGTAATCGAAAAGCTATTTGGCACCAATTTGAGTGATTTCAGCTTCATTTTTCTTCAGGTTCTGGTTTTTTAGGGATACCGAGTTGTTCTTGTGGCATTTTCAGAGGCTTGTAATTTGACCATGCAAAATCTGCATCATTTCATTTGTCGTCTCAGTTCCAATTCTCTTGGGAAAAGCACAAATGTGGGATCTAGTTTAATTACTGATTCAGTTTCCACATTGAAGCATGTTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGCTAATGCTAAGAATGAATGGGATAAGAGTGTGAGTGAATCGTTTTCTGGCACCACGACAGATGATTTAGGCTGGGATTCTGTTTCCTCTTGGTCTACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTAGGCCGCAGGGTTGGTGAAGGGGTGGATTCACCAAAATCACCACAGGCTTCATTAGTTTCTGGGTTGCAAGAGTTTGAAGACAGAATAAGGGAATTAGAGGCAGAAAACCGGAAAAGCAAGGACTTCGTGGACACGTGGGGTGAAAGGATGAAAGAGATGAGCATGCTTTTGAAACAAGTGAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCGGAGAAGGCTGAGATGTATCGCTTGCACAAGGAGAACCCTGAGGTATATACTGTTGAGAAGCTTGCTAAAGATTACAGGATTATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAGCTTGAAGAGGAAGAGGAGAAAAAACTGGGCCAGCCCTTGGATGATTCTGTTGAGCTTTTACTTGATACCTTCCCAGAGTATGTCACAAGTTTCTACCTTATGAAATTTAGATGAATATAGCATCTTAAGAACGATTTACGCCTTTATATTTTTCTCTTTGCAAAATCATTTTCACTCTTTCTTGGAAAAATGAAAACATAGTTCTTAGGACTCTTTTTCTATAGTATCTGGATTTAAGATTTAAAGGAACAAACCAGACAGATATATGATTTGGCATCAGAACACCTGTTTTGCTTTTTATGTTTACAATTTCGATCTTTATTTTTATCTATATGTAAGTTATTTTAGGAAGATACATGTTTCCTTGTCTAACTTTTAACAGATGTATGGTTGAATAAATTATAAAGGATGTGAAATTTGCAATCGTATAAATAAATTTTCACCCAACTAATTAGTCTTTTTCTTCATAAAACCTCCTGTTGATTATACATGATGTACACACTTATAGTACAGGTAAATTATTTTCTCTTTTTAAATTTTAATTTTTTACAATCCAGATTTTATAATTACTATAATGTTTTAAGATGAAGTTCAATGTTTCAAAGTCTTGGTTTTAGCAGACGATTTACTGTCTTATGGTTATTTTGATTATATTAATGTTCCTAATGTGTGATTGGTTTTGAAGGTAAAAGGATTAGATATGAACTTGCATAAGATTTTGAATTTACCATGCAAAAGATTTTTAAGTATGAAGATTAACTCATTTACCATTGACCTCTTATCTTCCTTATGGCCTGTTACAAGATTTCTTATCTCGTTTACCATTGGCATCTTTTCTCATTTACCATTGTCATTGTTTCTTGCAGGTTCTTTAAATCCCACGACCTGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAAGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAAATCTCCAAAAAAGAAGATGATATGTTGTATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAGTAAGTTTTGCTGTACTTTTGCTACACTCTATTTGGATGTGGAATGGCTGCGTGAGTATTGAAAGAGAATCTTCTTGAATCCATTTTGAATCCATTTACCAAATGATTTTTACTTGATTGGACTTGGATGGTTCTGAAACGTGAAATTGGCATTAATGATTAATTTTTTAAAGGCTAAAGGTAGCCTTGAAGTTTTTTCTCTTGAAGAGGATAACGCCTCAAGGTTATTCCTTTTTATTCTGAATGTCTTATTGATGTATAAGATTTATGTAAAGGATGATAGATCCATGATGGTTACAGAAGAAAGAGTCTCCAATCAAGAAAAATAAAACCAAGAGAAAAATTACAAAAGGAACTTGTCACTGATGCCCAAAGAGGGACATTAAGTCTCACCAAGGACCAAACATTAAAGGACTCCCTCTCCAACCCTCTAAAACTCTATTATTTCTTTCCCCATGATTCTTCCAATACAACACTCTCCCCAACTTTCCATAAAAAATACCCTTCTAAATGGTGAATGGAGGAGGGAACTCCTCGATTATATCACTAAAAGCTTTGTGATGGGCAATTTAAAGTCCAAACACATCAAAGAAAAAATTTCAACCTGTCAACTCCAAAACAGATGATCCAGATCTTCTTCCTCTTTCTGACGCAAAATGCAATAGAAAAGCCCAACAAAGGATGATAACTTTCTCTAATGCCTGTCTAAGGATTTATATTAAGGTCAGTCACTTTCTCAAAATAACCAACAACCTTGAAAAGGTTGTTTAGGGAGCTTTCGATACCAAAGGGGAGAAACGAATGGTGTCATTGACAAATTGGATATGGTTTATGATAACGTCGCCATTTCCACATGGAAGCCTTTAATTTGATTGTGAGACTCAGCGTTAGTGAGGAGCCTACTAAGGCTGTCCATGAAGAGGATAGGGGACGAAAGGTCTTCTTGACGTAGCCCACTAGTGACTAAGATCTTTCCCTTGGGTATTCTTTAATGATAATAGATAAATTTGCCGATGATATACAACCTTTAATCTCCAATGTCTCCTTTTTTGGCCAAAACCCTTTGCAGCAAGAATATTTTGAAGAAACCTCAATCAACCTCGTTGAATGCGTTTAAGTGTCTAATTTAATTGCCGTCCTTTCCCCTTTTCCTTTTCCTTTCATCAATAAGTTTGTTATCCATAAGAGAGGCATCGAGCGTTTGTCTACCTTCCCCAAAAGTTGTTTGATAGTGGTGGTATGGGGAAGAACTCTTTCAAGACACTTGGAGTACATGGGCCACAATCTGAAAAAAGAATAAAAAACTTGGAACACTCATAATATTGCACTTAAGGATGTTACTACCTTCTTTAAAAAGGAATTTGGAATAAATAATCACCTGGGGCTCGTAGACTTGGGATTGCCAAAGCTCTGTACAGCTTTTCAAACTTCTAATTCAGTAAAAGTGGCTTCTAAATCAGTGGCTTGGTGGTGATCAATGGGACTCCAGTCAGTACCCGAAGGGAAAGCCTCTAGATAATACTTCTTGTAGTGGATGGGATCCCGAAAATGGACCTTTTCTCTCCTAAGTGGCCTGGGTATAATGGCAGAAGCCATTATTCGCTTCTCCCTCCTCTATCCATCTATTTTTACATTTTTGTTTCCAAGATATCTCTTCTTTGGCTGTAAAAGACAACAATTCAGCTTGCATAAACTTTCTTGGTGTGCTGTTCAATAGAGATAGAATGATTGATATTTCAGCCCCTAATGAAAGAGCTGATTTCTTTTGATAGAGAGACGGCCAAAACCATTCCTGATTCATGACTTAATCACAGTTTTCAAACCTTTAGCTTTTGAATAGATTCATGGCCCGATCATCCCCTAATGAGAGTATTCTTCCACCAGTATTCGAACAAAGGGTCAAAGAAGGAGCGTTGAAGCCTCATATTTTCTAAACGGAAAAAATGAGGGACCCTAGTTTGTGTTGCCCAAAGAGAGAAGGGTGAAAATGGTCTGATGTCAGTGTATCAAGCCTTTTGACCCCAACCTTCGAGAATTTTTCAAGGGCATTTTCAGTGATAAGGAATCTGTCCATGAATGTTTTAGTCGGAGAGGTTCTGTTATTTGACCAAGTGAACAGCCATTTTGGAGTGGAGCATCTATCAAGTCAGCACTGGAAATGAAAGAGTTGAATAGTCTCATACGTCTGGAAGCCTTCCCATTAAACTTTTCATGGCCCATCGAAATAGGTTGAAGTCCCCTCCCAGCCAGTTTCCAGAAAATAAAAAGGGGAGGTCAGGGAGATCTTGCCAAAATGGGAGCAAACCCTTGTACCTGGAGTGGCCATAGATCCCTGTATTTCACAACTTGAAACTATCAACTGTAGTGAGAAGTGTAGAAAGGGAGAACACATCTTTTGTCACGTTCGCAGTCATTCCACGTGATAAGAACGCCACTTGATGAGCCCCAGAAATCCAAAGAACTAAGAAGTCCATCCAATGTGTCTGGACTCCACAGAAATTTGACAATGAGTCTATCGATAGAGGCAAGCTTTGTTTTCAATGCTGTCAAAGTTACAACAATGGAAGTAGTAACAGTTCAAACTGTCAAAACTTAAAATTTTATATTCTATTATAAATTTTTGAAGAATGATACAAATTAATATTATCCTTCTAATCATTGCACAAGGTGTTATAGACTTTAGATCTAAAAGTGAGAATCTTCCTCAAGGCGTAAGCCTCAATAGCAGCCTCTTAAAACAATGAATGATGATAATGGATTTGATTGAAGGGGGATGGTAGACATGATGTCTAATGGTATAATGGTGTACAAATGCAATGGAACTCGATTTTCCATTTTCGCACAATAATTCTTTCTTTCAAATGCAGATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCTGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCACGAGGGAAACGGGGAGGTGACGGTGGATGGAAGTTCGTCAGCTTGCCTGATGGTTCTAGCAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTCCCTTGATAAGTTTCAAGCACTTGCACATCGATCTAAGTGTGCATTTGATGATATAAATAGTTCGAAAAAAACTGGTAGATCCCCCAGGATGATTTCATAATTTTCTTTTGACTGACCTGTTTTTGATTGAACTTCATGCTTTGTTGTAGTAGTTTTCCCTGATGGTTCACATCTGCAATAACAGGTTTTCTTCATGCCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTCTGGGACGGTTTTTTTTGGTACCTTATTTCCAATGCTTTCTAAATAATGTAGCCC TGCTTCACATTCCTCCCTTCCTCCCATTTCCAGCTACACCCCGCACCGTCGCACGCCGCTCCTGCCCGACGAAGTCTCAGCCTCCCGACATACTCGCCGCCGCTCCCTTCCTCCCTCTTACTTACACTCTCTCGTTTCTCTGAGCAATCAGAGTTAGTTATCTCTGTTGTTTTCTTCTTTCTCAGAAATATATAACAGCGGTTCAGTCAGTCACAACTCACGCTGCTGGTGAGGTCCGGTCGCCCCTCATTTTTCAGATCCAGCGCCAAGGTTCTGGTTTTTTAGGGATACCGAGTTGTTCTTGTGGCATTTTCAGAGGCTTGTAATTTGACCATGCAAAATCTGCATCATTTCATTTGTCGTCTCAGTTCCAATTCTCTTGGGAAAAGCACAAATGTGGGATCTAGTTTAATTACTGATTCAGTTTCCACATTGAAGCATGTTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGCTAATGCTAAGAATGAATGGGATAAGAGTGTGAGTGAATCGTTTTCTGGCACCACGACAGATGATTTAGGCTGGGATTCTGTTTCCTCTTGGTCTACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTAGGCCGCAGGGTTGGTGAAGGGGTGGATTCACCAAAATCACCACAGGCTTCATTAGTTTCTGGGTTGCAAGAGTTTGAAGACAGAATAAGGGAATTAGAGGCAGAAAACCGGAAAAGCAAGGACTTCGTGGACACGTGGGGTGAAAGGATGAAAGAGATGAGCATGCTTTTGAAACAAGTGAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCGGAGAAGGCTGAGATGTATCGCTTGCACAAGGAGAACCCTGAGGTATATACTGTTGAGAAGCTTGCTAAAGATTACAGGATTATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAGCTTGAAGAGGAAGAGGAGAAAAAACTGGGCCAGCCCTTGGATGATTCTGTTGAGCTTTTACTTGATACCTTCCCAGAGTTCTTTAAATCCCACGACCTGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAAGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAAATCTCCAAAAAAGAAGATGATATGTTGTATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCTGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCACGAGGGAAACGGGGAGGTGACGGTGGATGGAAGTTCGTCAGCTTGCCTGATGGTTCTAGCAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTCCCTTGATAAGTTTCAAGCACTTGCACATCGATCTAAGTGTGCATTTGATGATATAAATAGTTCGAAAAAAACTGGTAGATCCCCCAGGATGATTTCATAATTTTCTTTTGACTGACCTGTTTTTGATTGAACTTCATGCTTTGTTGTAGTAGTTTTCCCTGATGGTTCACATCTGCAATAACAGGTTTTCTTCATGCCTCTCTCTCTCTCTCTGGGACGGTTTTTTTTGGTACCTTATTTCCAATGCTTTCTAAATAATGTAGCCC ATGCAAAATCTGCATCATTTCATTTGTCGTCTCAGTTCCAATTCTCTTGGGAAAAGCACAAATGTGGGATCTAGTTTAATTACTGATTCAGTTTCCACATTGAAGCATGTTCAAGGAGCTTGGTTAACCACTTTGAGAGAGTTCTCTGCAAAATCTGGTGGATTTGATGAAGCTAATGCTAAGAATGAATGGGATAAGAGTGTGAGTGAATCGTTTTCTGGCACCACGACAGATGATTTAGGCTGGGATTCTGTTTCCTCTTGGTCTACTGGATTGACCAAAGAGCATTTTGATGGAGAGGCTGTAGGCCGCAGGGTTGGTGAAGGGGTGGATTCACCAAAATCACCACAGGCTTCATTAGTTTCTGGGTTGCAAGAGTTTGAAGACAGAATAAGGGAATTAGAGGCAGAAAACCGGAAAAGCAAGGACTTCGTGGACACGTGGGGTGAAAGGATGAAAGAGATGAGCATGCTTTTGAAACAAGTGAGAGAGCCTGGTGCTAGAGGGTCTTATCTCAAGGACTCGGAGAAGGCTGAGATGTATCGCTTGCACAAGGAGAACCCTGAGGTATATACTGTTGAGAAGCTTGCTAAAGATTACAGGATTATGAGGCAAAGGGTTCACGCCATTCTTTGGCTGAAAGAGCTTGAAGAGGAAGAGGAGAAAAAACTGGGCCAGCCCTTGGATGATTCTGTTGAGCTTTTACTTGATACCTTCCCAGAGTTCTTTAAATCCCACGACCTGGAATTCCATGTGGCATCCCTTCCGTACAAACCTGATTTCAAGGTTATGCCGGAAGGTTGGGATGGTACAACCAGAGATTTGGATGAAGTCCATTACGAAATCTCCAAAAAAGAAGATGATATGTTGTATAAAGAATTTGTCGAGAAGATGAATTTCAACAAAAAGAAAATTGCAGGAGAGGTCTTTCGCCACAAATATAGTAGGCGTCGGGCTGCAGATGGGTGGAAATTCACAATAGAGAAAATGGGACCACGAGGGAAACGGGGAGGTGACGGTGGATGGAAGTTCGTCAGCTTGCCTGATGGTTCTAGCAGGCCATTGAACGAAATGGAGAAGATGTATGTGAGGCGAGAGACACCTCGCCATCGACGTAAAATCCTCCCTTGA MQNLHHFICRLSSNSLGKSTNVGSSLITDSVSTLKHVQGAWLTTLREFSAKSGGFDEANAKNEWDKSVSESFSGTTTDDLGWDSVSSWSTGLTKEHFDGEAVGRRVGEGVDSPKSPQASLVSGLQEFEDRIRELEAENRKSKDFVDTWGERMKEMSMLLKQVREPGARGSYLKDSEKAEMYRLHKENPEVYTVEKLAKDYRIMRQRVHAILWLKELEEEEEKKLGQPLDDSVELLLDTFPEFFKSHDLEFHVASLPYKPDFKVMPEGWDGTTRDLDEVHYEISKKEDDMLYKEFVEKMNFNKKKIAGEVFRHKYSRRRAADGWKFTIEKMGPRGKRGGDGGWKFVSLPDGSSRPLNEMEKMYVRRETPRHRRKILP
BLAST of Carg26183 vs. NCBI nr
Match: XP_022923343.1 (uncharacterized protein LOC111431066 [Cucurbita moschata]) HSP 1 Score: 748.0 bits (1930), Expect = 1.5e-212 Identity = 375/376 (99.73%), Postives = 375/376 (99.73%), Query Frame = 0
BLAST of Carg26183 vs. NCBI nr
Match: XP_022965080.1 (uncharacterized protein LOC111465050 [Cucurbita maxima]) HSP 1 Score: 734.2 bits (1894), Expect = 2.3e-208 Identity = 368/376 (97.87%), Postives = 371/376 (98.67%), Query Frame = 0
BLAST of Carg26183 vs. NCBI nr
Match: XP_023553278.1 (uncharacterized protein LOC111810742 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 729.6 bits (1882), Expect = 5.6e-207 Identity = 365/376 (97.07%), Postives = 370/376 (98.40%), Query Frame = 0
BLAST of Carg26183 vs. NCBI nr
Match: XP_022154030.1 (uncharacterized protein LOC111021386 [Momordica charantia]) HSP 1 Score: 676.0 bits (1743), Expect = 7.3e-191 Identity = 342/384 (89.06%), Postives = 356/384 (92.71%), Query Frame = 0
BLAST of Carg26183 vs. NCBI nr
Match: XP_016900637.1 (PREDICTED: uncharacterized protein LOC103490896 [Cucumis melo]) HSP 1 Score: 645.2 bits (1663), Expect = 1.4e-181 Identity = 325/384 (84.64%), Postives = 349/384 (90.89%), Query Frame = 0
BLAST of Carg26183 vs. TAIR10
Match: AT5G62270.2 (FUNCTIONS IN: molecular_function unknown) HSP 1 Score: 450.3 bits (1157), Expect = 1.2e-126 Identity = 240/389 (61.70%), Postives = 288/389 (74.04%), Query Frame = 0
BLAST of Carg26183 vs. TAIR10
Match: AT2G02880.1 (mucin-related) HSP 1 Score: 119.8 bits (299), Expect = 3.7e-27 Identity = 76/231 (32.90%), Postives = 125/231 (54.11%), Query Frame = 0
BLAST of Carg26183 vs. TrEMBL
Match: tr|A0A1S4DXD4|A0A1S4DXD4_CUCME (uncharacterized protein LOC103490896 OS=Cucumis melo OX=3656 GN=LOC103490896 PE=4 SV=1) HSP 1 Score: 645.2 bits (1663), Expect = 9.1e-182 Identity = 325/384 (84.64%), Postives = 349/384 (90.89%), Query Frame = 0
BLAST of Carg26183 vs. TrEMBL
Match: tr|A0A0A0L1K7|A0A0A0L1K7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G020630 PE=4 SV=1) HSP 1 Score: 642.9 bits (1657), Expect = 4.5e-181 Identity = 326/384 (84.90%), Postives = 350/384 (91.15%), Query Frame = 0
BLAST of Carg26183 vs. TrEMBL
Match: tr|A0A2N9G1G3|A0A2N9G1G3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20883 PE=4 SV=1) HSP 1 Score: 554.7 bits (1428), Expect = 1.6e-154 Identity = 288/376 (76.60%), Postives = 316/376 (84.04%), Query Frame = 0
BLAST of Carg26183 vs. TrEMBL
Match: tr|A0A2P6QEQ4|A0A2P6QEQ4_ROSCH (Putative ribosomal protein S35 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr5g0048751 PE=4 SV=1) HSP 1 Score: 551.6 bits (1420), Expect = 1.4e-153 Identity = 279/378 (73.81%), Postives = 317/378 (83.86%), Query Frame = 0
BLAST of Carg26183 vs. TrEMBL
Match: tr|A0A2P4JRQ4|A0A2P4JRQ4_QUESU (Uncharacterized protein OS=Quercus suber OX=58331 GN=CFP56_45018 PE=4 SV=1) HSP 1 Score: 550.4 bits (1417), Expect = 3.1e-153 Identity = 286/376 (76.06%), Postives = 316/376 (84.04%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |