Carg26188-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.AACACCCTTTATAAGGGCATGGAAACCTTTCTCTAGTAGACGCGTTTTAAAAACCTTGAGGGTAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGTTAGCGGTGTGGTACATGTTACAATTACTATAAAAGATTACATAGTACATGTTATTTTAGAAGCATTCTTTTCGTCGAACTGGAAACAAAATTGTTATCAACCTGAGTCTTAGCGGTGTAATTTTTCATTTGAAGTCCCATCAACCTTTGTTTCCAGCATAGACCAGCACAATGGAAGACAGTAAAAACCATTTTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAGTAAGGTTGAGATTTCTCCATAATCATGTTCGAACAACTCCACGATATAATGTCTCAAAAGTTGACGTCGTTGTTACATTTTTATGCAGATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGTATCAGGAAATCGTCGTGATTATATTTTCATCGACTTTTTTCAGCATCGGGATGTTTTCTATACTAGAAAGATAATGATGTCTAGGCTTTGCTCCTTTTTGCTTTCATGTCTCTTAAACTATTCATATAACTTATTATCTGTTTCTTACTGTTTGGAGCTCTTACTTTTTGATGTAGTTTCAATGTTACTGTAGATGGGTGCTGTAAAAGTCTTTTAGATGTTCTTATTACACCTACATTATGGGGGAAAATTCAATATTTACCACTGTACTTTGACTCATTTGAATCAGTTTGAACTTCATCCTTCAATTTGTTAAATCCTAAAGTTGAATAGGTGGTGAAATCAATACCTTCAATTAGTTAAGTTTCTATCTTCTTGAAAATTTGTGGTTAGTAATGATCTCACATTGGTTGGAGAGGAGAACGAAACATTATTTATAAGGATGTGGAAACCTCTCCCTAGTAGACGCATTCTAAAAACCTTGAGGGGAAGCCCGAAAGGAAAAGCCCAAAGAGGATAATATCTGCTAGAGGTGGGTTTGGGCTGTTACAAAAGGTATTGGAGTCAGACACCTGGACGGTGTGTTAGCGAGGACGCTGAGCCCCAAAGGGGGTGGACACAGGGCGGTGTGTCAGCGAGGACGTTAGGGCCCTGAAGGGGGTGGATTTGTGAGATCCCACATCGATTAGAGAGTGGAACGAGTGTCAGCGAGGATGTTGGGTATCAAAGGGGGTGAATTGTGAGATCTCACATCGGTTGGAGAGGGGAACGAAACATTCTTTTTAAGGGTGTGAAAACCTCTCCTTAACAAGCACGTTTTTAAAACCTTGAGGGGAAACCCGAAAGGGAAAGTCCAAACAGGATAATATCTGCTTGCGGTGGACTTAGGCTGTTACAGTATTCTTGTGGTTGGACAAAAGTATTTTTGTGAGTATTGATTTTTCTGGTTATATCTGATGTTTCTTAACTGGGTAAGAGCACGTGGTTTGATTTAAAAGAAGTACGAGATTTAATACGCTACTATATCATACGCTTATGCATTTTAACTGGATGTTTATGGATGTGGAAAAGGTAGATAGCTACCGTGGAAGGGATCTTTAACTTTTGGTTTTTCCTTTTGGAGATGTTTATCATCTTTTTATTATCCCAAAGAACACATTTTAAAAACTGTTTGCTTCTCCAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGGTATTCTACTCATCATGATGTAGCTTCGAACCGTTTGATGCTCTCTTTTGATGATTTTGATGTGTGCTATACCCTTATATACTCAGAACAATTCAAGTATTTCATTTCCATTTATAAAGGAGATAGACAATATCATGACCGCTGTTTATGTAACAACCCAAGGTTTTTAAAACGCGTATGCTAGCGAGATGTTTCCATACCCTTATAAAGAATGCTTTGTTCCCTTCTCCAATTGACGTGGGATCTCACAATCCACCCCCTTTCGAGGCCCAGCGTCTTCGCTGGCACTCGTTCCTCTCTCTAATCGATGTGGGATCTCAAAATCCACCCACTTTCGGGGCCCAGCTTCTTCGTTGGCACATCGTCCGATGTCCACCCCCTTCGGGGGCTCAGTGTCCTCGCTGGCACGCCGTCTGGTGTTTTGACTCTAATACCATTTGTAACAGCCCAAGCCCACCGTTAACAGATATTATTCTTCTTGGGCTTTTCCTTTCGAGCTTCCCCTCAAGATTTTTAAAACGTGTATGTTAGGGAGAGGTTTCCACACCCTTATAAAAAATGCTTCGTTTCCTTCTCCAACCGATGTGGGATCTCACAATCCACTCCCTTTCGGGGCTCAGCGTTCTCGCTGGCACTCGTTCCTCTCTCCAATCGATGTGGGATCTCACAATCTACCCACCTTCGAGGCTCAGCTTTCTCGTTGGTACACCGATGTCCACCCCTTTCGGGGCTCAGCATCCTCGCTAGCACACTACCTAGTGTTTGGCTCTGATACTATTTGTAACAGCCAAAGCCCACCACTAGCTAATATTGTCCTCTTTGGGCTTTCACTTTCGGGCTTCTCTTCAAAGTTTTTAAAATGCGTCTGCTAGGGAGAGGTTTCCACACCCTTATAAACAATGTTTCGTTCCCCTCTCTAACCGGTTTCCACACCCTTATAAAGAATGTTTCGTTCCCCTCTCCAACTGATTGAGATCTCACTTGAGGAAATCTTGCATAGTAGTTGACACATTGGTGCAATCTTGCGTACTAAACTATATATCTGATATTTAGACAATACTTTTAATACCACCGCCTACCGTTCTCTATTGTACTTAATCCTCTAGCTAAAGTTTTTGTTGCTTCTCTGTACACCTGCAAATGGTCACTCTTATTTTCCACCATTCAAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGGTGAGTCACTCCCTTTTTAATTATCGACTTATTTAAAAACTTGTCTTAATTATCGACTTCGAATCGATTACTTTCCAGTTTACAGTTCATGGGAAGTGGGAAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAGCTCACATAATCGGTAACAGATAAGCTAATCATTTTCCATGCTTCATCTCTGTGTTCTTATGAAATACAAGAGCTAAGTATTATGGCTGTCTTTTATGTTCAAAGATGATATGCATAATCACAATCATTAGCCGGCCATAATAAGTCTGTATTTTTCTTCCATATTGTAATGTACTTCTGCTTGTATTGATCAATATTCAGTGGCTGTAATCTTTGTTCTGAGAATGCAAAACTTGGTTATCTTAAGCTGTTGTTTGCATTTGGGATGAGCTTAATTTAAGCTTTGAGGTTTGTAGTTTTCTTGAGAACTCTGCTTTGATTTGAATGGTTTCTTTGGAGTCAACTTATAATTAATGACCGTCCCCGTAATAGCCAAAACCCGCTGTTAGCA AACACCCTTTATAAGGGCATGGAAACCTTTCTCTAGTAGACGCGTTTTAAAAACCTTGAGGGTAAGCCCGAAAGGGAAAACCCAAAGAGGACAATATCTGTTAGCGGTGTGGTACATGTTACAATTACTATAAAAGATTACATAGTACATGTTATTTTAGAAGCATTCTTTTCGTCGAACTGGAAACAAAATTGTTATCAACCTGAGTCTTAGCGGTGTAATTTTTCATTTGAAGTCCCATCAACCTTTGTTTCCAGCATAGACCAGCACAATGGAAGACAGTAAAAACCATTTTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGCTAAAGTTTTTGTTGCTTCTCTGTACACCTGCAAATGGTCACTCTTATTTTCCACCATTCAAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGTTTACAGTTCATGGGAAGTGGGAAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAGCTCACATAATCGGTAACAGATAAGCTAATCATTTTCCATGCTTCATCTCTGTGTTCTTATGAAATACAAGAGCTAAGTATTATGGCTGTCTTTTATGTTCAAAGATGATATGCATAATCACAATCATTAGCCGGCCATAATAAGTCTGTATTTTTCTTCCATATTGTAATGTACTTCTGCTTGTATTGATCAATATTCAGTGGCTGTAATCTTTGTTCTGAGAATGCAAAACTTGGTTATCTTAAGCTGTTGTTTGCATTTGGGATGAGCTTAATTTAAGCTTTGAGGTTTGTAGTTTTCTTGAGAACTCTGCTTTGATTTGAATGGTTTCTTTGGAGTCAACTTATAATTAATGACCGTCCCCGTAATAGCCAAAACCCGCTGTTAGCA ATGGAAGACAGTAAAAACCATTTTTCTGAAGAAACTACAAAGGGGTTTGCTAAAAGCACCAAAGATCAAAAACTAAATGTGTATGTGTGGGACATGGATGAAACTATCATCCTGCTCAAGTCTTTGTTGAATGGGACATATGCTGAGGCTTTTTGTGGTTCAAAGGATATTAAAAGGGGTGAAGAACTTGGCAAAATTTGGGAGAAGCAGATTCTTGATCTGTGTGATCATCACTTCTTCTATGAACAAATAGAAAACTATAATCAACCGTTCATTGATGCATTGAGTGAATATGATGACGGCCGGGATCTTTCCGATTATGATTTTGACCAAGATGGGTTCGATCCACCATATGATGATGGAAACAAAAGAAAATTGGCTTTTAGGCAACGTGCTATAGCCAATAAGTACAAAGAGGGCCTGCAGAATATCTTTGATGAGCAGAAGATGAAGTTCTGGGAAGAGTTATATGAAATGACTGATGTCTATACAGATAGATGGTTCTCCTCAGCTAAAGTTTTTGTTGCTTCTCTGTACACCTGCAAATGGTCACTCTTATTTTCCACCATTCAAGCACGAGCTTTCTTGGAGGAGTGTGCATTTTCAGACGAACCACCACTCGTGTCTGCTGATCGGGCACGTAACAGTACTTCTAGAAGTTCTCAGCATGTTAATATCTTGGTGACTTCTGGATCATTGATACCCAGCCTTGTGAAATGCTTACTATTTCGGCTTGATCATCTAATAACACCCGGAAATGTTTACAGTTCATGGGAAGTGGGAAAACTACAATGTTTCAAATGGATCAAGGAGCGTTTTAACAAGACGAATGTTCGTTTCTGCGTAATAGGCGACGGATGGGAAGAGTGCGAAGCTGCACAGTCCTTGAAATGGCCATTTGTTAAGATTGAGCTGCAACCTGGAAGCCCTCACAGATTTCCTGGTCTGTCTTTGAAAACACTTGGCTTTTACTTCTCTGTTATTTATGGTAACTCTGATTCATCAAGTGATGAAGAATAG MEDSKNHFSEETTKGFAKSTKDQKLNVYVWDMDETIILLKSLLNGTYAEAFCGSKDIKRGEELGKIWEKQILDLCDHHFFYEQIENYNQPFIDALSEYDDGRDLSDYDFDQDGFDPPYDDGNKRKLAFRQRAIANKYKEGLQNIFDEQKMKFWEELYEMTDVYTDRWFSSAKVFVASLYTCKWSLLFSTIQARAFLEECAFSDEPPLVSADRARNSTSRSSQHVNILVTSGSLIPSLVKCLLFRLDHLITPGNVYSSWEVGKLQCFKWIKERFNKTNVRFCVIGDGWEECEAAQSLKWPFVKIELQPGSPHRFPGLSLKTLGFYFSVIYGNSDSSSDEE
BLAST of Carg26188-RA vs. NCBI nr
Match: XP_022923383.1 (eyes absent homolog 2 [Cucurbita moschata] >XP_022923384.1 eyes absent homolog 2 [Cucurbita moschata]) HSP 1 Score: 646.0 bits (1665), Expect = 7.3e-182 Identity = 317/339 (93.51%), Postives = 317/339 (93.51%), Query Frame = 0
BLAST of Carg26188-RA vs. NCBI nr
Match: XP_022965107.1 (eyes absent homolog 4 [Cucurbita maxima] >XP_022965108.1 eyes absent homolog 4 [Cucurbita maxima]) HSP 1 Score: 638.3 bits (1645), Expect = 1.5e-179 Identity = 312/339 (92.04%), Postives = 315/339 (92.92%), Query Frame = 0
BLAST of Carg26188-RA vs. NCBI nr
Match: XP_023553165.1 (eyes absent homolog 2 [Cucurbita pepo subsp. pepo] >XP_023553166.1 eyes absent homolog 2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 637.9 bits (1644), Expect = 2.0e-179 Identity = 312/339 (92.04%), Postives = 314/339 (92.63%), Query Frame = 0
BLAST of Carg26188-RA vs. NCBI nr
Match: XP_022145451.1 (eyes absent homolog 2 [Momordica charantia]) HSP 1 Score: 568.5 bits (1464), Expect = 1.5e-158 Identity = 274/339 (80.83%), Postives = 301/339 (88.79%), Query Frame = 0
BLAST of Carg26188-RA vs. NCBI nr
Match: XP_008448705.1 (PREDICTED: eyes absent homolog 2 [Cucumis melo] >XP_008448706.1 PREDICTED: eyes absent homolog 2 [Cucumis melo]) HSP 1 Score: 562.8 bits (1449), Expect = 8.1e-157 Identity = 275/341 (80.65%), Postives = 299/341 (87.68%), Query Frame = 0
BLAST of Carg26188-RA vs. TAIR10
Match: AT2G35320.1 (EYES ABSENT homolog) HSP 1 Score: 383.3 bits (983), Expect = 1.6e-106 Identity = 188/318 (59.12%), Postives = 234/318 (73.58%), Query Frame = 0
BLAST of Carg26188-RA vs. Swiss-Prot
Match: sp|O82162|EYA_ARATH (Eyes absent homolog OS=Arabidopsis thaliana OX=3702 GN=EYA PE=1 SV=2) HSP 1 Score: 383.3 bits (983), Expect = 2.9e-105 Identity = 188/318 (59.12%), Postives = 234/318 (73.58%), Query Frame = 0
BLAST of Carg26188-RA vs. Swiss-Prot
Match: sp|Q9Z191|EYA4_MOUSE (Eyes absent homolog 4 OS=Mus musculus OX=10090 GN=Eya4 PE=2 SV=2) HSP 1 Score: 136.3 bits (342), Expect = 6.1e-31 Identity = 97/293 (33.11%), Postives = 133/293 (45.39%), Query Frame = 0
BLAST of Carg26188-RA vs. Swiss-Prot
Match: sp|O95677|EYA4_HUMAN (Eyes absent homolog 4 OS=Homo sapiens OX=9606 GN=EYA4 PE=1 SV=2) HSP 1 Score: 135.2 bits (339), Expect = 1.4e-30 Identity = 96/293 (32.76%), Postives = 135/293 (46.08%), Query Frame = 0
BLAST of Carg26188-RA vs. Swiss-Prot
Match: sp|Q58DB6|EYA2_BOVIN (Eyes absent homolog 2 OS=Bos taurus OX=9913 GN=EYA2 PE=2 SV=1) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30 Identity = 93/293 (31.74%), Postives = 135/293 (46.08%), Query Frame = 0
BLAST of Carg26188-RA vs. Swiss-Prot
Match: sp|O00167|EYA2_HUMAN (Eyes absent homolog 2 OS=Homo sapiens OX=9606 GN=EYA2 PE=1 SV=2) HSP 1 Score: 134.8 bits (338), Expect = 1.8e-30 Identity = 93/293 (31.74%), Postives = 135/293 (46.08%), Query Frame = 0
BLAST of Carg26188-RA vs. TrEMBL
Match: tr|A0A1S3BKY6|A0A1S3BKY6_CUCME (eyes absent homolog 2 OS=Cucumis melo OX=3656 GN=LOC103490796 PE=4 SV=1) HSP 1 Score: 562.8 bits (1449), Expect = 5.4e-157 Identity = 275/341 (80.65%), Postives = 299/341 (87.68%), Query Frame = 0
BLAST of Carg26188-RA vs. TrEMBL
Match: tr|A0A0A0L1X7|A0A0A0L1X7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G011790 PE=4 SV=1) HSP 1 Score: 549.7 bits (1415), Expect = 4.7e-153 Identity = 269/332 (81.02%), Postives = 291/332 (87.65%), Query Frame = 0
BLAST of Carg26188-RA vs. TrEMBL
Match: tr|A0A2I4EZ76|A0A2I4EZ76_9ROSI (eyes absent homolog 4 isoform X1 OS=Juglans regia OX=51240 GN=LOC108994070 PE=4 SV=1) HSP 1 Score: 443.4 bits (1139), Expect = 4.7e-121 Identity = 211/336 (62.80%), Postives = 258/336 (76.79%), Query Frame = 0
BLAST of Carg26188-RA vs. TrEMBL
Match: tr|W9RN72|W9RN72_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_023285 PE=4 SV=1) HSP 1 Score: 439.1 bits (1128), Expect = 8.9e-120 Identity = 206/332 (62.05%), Postives = 258/332 (77.71%), Query Frame = 0
BLAST of Carg26188-RA vs. TrEMBL
Match: tr|F6HTB0|F6HTB0_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_02s0012g01000 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 1.5e-119 Identity = 210/328 (64.02%), Postives = 253/328 (77.13%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following exon feature(s) are a part of this mRNA:
The following five_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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