Carg25367 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg25367
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	transcriptional regulator SUPERMAN-like
Location	Cucurbita_argyrosperma_scaffold_246 : 386358 .. 386903 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

mRNA sequence

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

Coding sequence (CDS)

ATGTGGAACCCGAACCAAGCTCACCGAGACGACGACGACGACGATTCATGGGAGATTAGGGCTTTCGCCGAAGACACTATGGGCACAACTTGGCCACCTAGGTTCTACAATTGCACATTTTGTGGACGAGAATTTAGATCTGCCCAAGCCTTGGGTGGCCACATGAATGTTCATCGTCGCGACCGTGTACGTTTTCGCCACGAAAATCAACCCATCTCATCCTTGACATCGTCTTTCACGATCCCCGCCACCAATGTCGTCTACGATGGTGGTGGGGTTTGTTTCTTCTACCAATTACCAAATGAAAACAGCAATTTCCTCCACTCCATCTCTTTACACTCCGCTACCCCATATCCATCAAACAATCCGATTGCGTCGTCCATACCATCTTTAAAGTTGTCGGGAGAGCTCGGAGGAACATCGAGCTCCTCGTCTCACTGCAGTCACATGTCTAGCAAAGGAGATGAATCCTTGATATCAATTGATGATGGAGCTGAGAAGCTTGATCTAGAGCTGAGACTTGGACAAAGGCCATCTCCAGCTTGA

Protein sequence

MWNPNQAHRDDDDDDSWEIRAFAEDTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSISLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESLISIDDGAEKLDLELRLGQRPSPA

Homology

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BLAST of Carg25367 vs. NCBI nr
Match: XP_004148758.1 (PREDICTED: transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palmate-like pentafoliata 1 transcription factor, partial [Cucumis sativus] >KGN55773.1 hypothetical protein Csa_3G011750 [Cucumis sativus])

HSP 1 Score: 248.8 bits (634), Expect = 1.4e-62
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQAH+ D+DDDSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MWNPNQAHQ-DEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP--ISSLTSSFTIPATNVVYDG-GGVCFFYQLPNENSNFLHSIS--- 120
           HRRDRVRF H+ QP  I  ++ SFTIP   ++Y+    VCF YQLPN+N NFL+SI+   
Sbjct: 61  HRRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSD 120

Query: 121 --LHSA--TPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGAE 180
             L S+    +PS+   ASS+ SLK  GEL GGTSSSSSHCSH+SSKGD+SLISI+DG E
Sbjct: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: XP_008448698.1 (PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo])

HSP 1 Score: 240.7 bits (613), Expect = 3.8e-60
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           M NPNQAH+ D+D DSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 71  MLNPNQAHQ-DEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 130

Query: 61  HRRDRVRFRHENQ--PISSLTSSFTIPATNVVYDG--GGVCFFYQLPNENSNFLHSISLH 120
           HRRDRVRF H+ Q   I  ++ SFTIP   ++Y+     VCF YQLPN+N +FL+SI+  
Sbjct: 131 HRRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSS 190

Query: 121 -------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGA 180
                  S   +PS++  ASS+ SLK  GEL GGTSSSSSHCSHMSSKGD+SLISI+DG 
Sbjct: 191 GACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGN 250

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: XP_022145395.1 (zinc finger protein 11-like [Momordica charantia])

HSP 1 Score: 217.6 bits (553), Expect = 3.4e-53
Identity = 126/197 (63.96%), Postives = 141/197 (71.57%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQ H+ DDDDDSWEIRAFAEDT   MGTTWPPRFY CTFC REFRSAQALGGHMNV
Sbjct: 1   MWNPNQPHQ-DDDDDSWEIRAFAEDTGNIMGTTWPPRFYTCTFCRREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP------ISSLTSSFTIPATNVVY--DGGGVCFFYQLPNENSNFLHS 120
           HRRDR RF H+ QP       S  +SSF +P    +Y           QLPN+N  FL+ 
Sbjct: 61  HRRDRARFHHQTQPNSIQPISSPSSSSFAVPTAEDIYXXXXXXXXXXXQLPNDNGGFLNP 120

Query: 121 ISLHSA--TPYPSNNPIASSIPSLKLSGELGGTSS-SSSHCSHMSSKGD-ESLISIDDGA 180
           I+  +   +PYPSN   +SS+PS K   EL GTSS SSSHCSH+SSKGD ESLISIDDG 
Sbjct: 121 ITSGACLRSPYPSN---SSSLPSAKSPEELRGTSSASSSHCSHISSKGDHESLISIDDGD 180

Query: 181 E-KLDLELRLGQRPSPA 182
           + KLDLELRLG RPSP+
Sbjct: 181 DPKLDLELRLGHRPSPS 193

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: XP_004301687.1 (PREDICTED: transcriptional regulator SUPERMAN [Fragaria vesca subsp. vesca])

HSP 1 Score: 159.8 bits (403), Expect = 8.5e-36
Identity = 102/212 (48.11%), Postives = 124/212 (58.49%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP QAH  D +DDSWE+RAFAEDT   MGTTWPPR Y CTFC REFRSAQALGGHMNV
Sbjct: 26  MWNPKQAH--DQEDDSWEVRAFAEDTGNVMGTTWPPRSYTCTFCRREFRSAQALGGHMNV 85

Query: 61  HRRDRVRFRHENQP---------ISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSN-FL 120
           HRRDR R      P         +SS  SSF IP    +   GG+C  YQLP+ N+  F 
Sbjct: 86  HRRDRARLHQVQHPSSISINPSAVSSSNSSFVIPTQEFLAANGGLCLLYQLPHPNNGAFT 145

Query: 121 HSISLHSATPYPSNNPI---ASSIPSLKLS------GELGGTSSSS-------------S 176
           +S +    TP+ +N  +   +SS+PS  LS       +   TSSSS             S
Sbjct: 146 NSNATAPITPFLNNTTVESSSSSVPSTLLSISPNPLHDYLMTSSSSLVGPHGVSNSIKNS 205

[Close]

BLAST of Carg25367 vs. NCBI nr
Match: GAV69097.1 (zf-C2H2_6 domain-containing protein [Cephalotus follicularis])

HSP 1 Score: 159.5 bits (402), Expect = 1.1e-35
Identity = 99/211 (46.92%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP QA   D +DDSWE+RAFAEDT   MGTTWPPR Y CTFC REFRSAQALGGHMNV
Sbjct: 34  MWNPKQAQAQDQEDDSWEVRAFAEDTGNSMGTTWPPRSYTCTFCRREFRSAQALGGHMNV 93

Query: 61  HRRDRVRFRHENQPISSL----------TSSFTIPATNVVYDGGGVCFFYQLPNENSNFL 120
           HRRDR +  H+ QP  S+          +S+  IP      +GG +C  YQLPN +  F 
Sbjct: 94  HRRDRAQL-HQTQPPRSINTAASSASISSSTLIIPTQEFATNGGRLCLLYQLPNPSGVFT 153

Query: 121 HSI---------SLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESL 179
            ++         +L S +PYP NN I    PSL+L  ++     +SSHC    SK ++  
Sbjct: 154 PTLNACAVDSPSTLLSISPYPHNNLIGQ--PSLEL--QVAAQGLNSSHC--FFSKTEQPS 213

[Close]

BLAST of Carg25367 vs. TAIR10
Match: AT4G17810.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 122.5 bits (306), Expect = 2.7e-28
Identity = 79/206 (38.35%), Postives = 109/206 (52.91%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT----MGTTWPPRFYNCTFCGREFRSAQALGGHMN 60
           MWNPN+    +DDD+SWE++AF +DT     GTTWPPR Y C FC REFRSAQALGGHMN
Sbjct: 7   MWNPNKIEELEDDDESWEVKAFEQDTKGNISGTTWPPRSYTCNFCRREFRSAQALGGHMN 66

Query: 61  VHRRDRVRFR-HENQPISSLTSSF-----------TIPATNVVYDG-----GGVCFFYQL 120
           VHRRDR   R H+   +++   S             +P T ++         G+  FYQL
Sbjct: 67  VHRRDRASSRAHQGSTVAAAARSGHGGMLLNSCAPPLPTTTLIIQSTASNIEGLSHFYQL 126

Query: 121 PNENSNFLHS---ISLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDE 179
            N +  F +S   ++L+  T +P +N     +P   L+  +             S+  DE
Sbjct: 127 QNPSGIFGNSGDMVNLYGTTSFPPSN-----LPFSMLNSPV----EVPPRLIEYSTGDDE 186

[Close]

BLAST of Carg25367 vs. TAIR10
Match: AT2G37740.1 (zinc-finger protein 10)

HSP 1 Score: 85.5 bits (210), Expect = 3.7e-17
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 2   WNPNQAHRDDDDDDSWEIRAFAE-DTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
           W P ++++    + SWE  AFAE D  G+ WPPR Y C+FC REF+SAQALGGHMNVHRR
Sbjct: 8   WIPKKSNK----ESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRR 67

Query: 62  DRVRFRHENQ----PISSLTSSFTI--PATNVVYDGGGVCFFYQLPN---ENSNFLHSIS 121
           DR R +  +     P SS +  +     + N+         F   PN      + +  +S
Sbjct: 68  DRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLS 127

Query: 122 LHSATPYPSNNPIASSIP 130
             S+ PY + + ++S +P
Sbjct: 128 SSSSLPYLTPSRVSSGLP 141

[Close]

BLAST of Carg25367 vs. TAIR10
Match: AT5G06070.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 77.4 bits (189), Expect = 1.0e-14
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 28 GTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPAT 85
          G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R + +     SL+ S T  AT
Sbjct: 47 GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ-----SLSPSSTDQAT 98

[Close]

BLAST of Carg25367 vs. TAIR10
Match: AT2G42410.1 (zinc finger protein 11)

HSP 1 Score: 69.7 bits (169), Expect = 2.1e-12
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 31 WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFR---------HENQPISS 75
          WPP+ Y C+FC REFRSAQALGGHMNVHRRDR + R         H + PI++
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN 96

[Close]

BLAST of Carg25367 vs. TAIR10
Match: AT3G23130.1 (C2H2 and C2HC zinc fingers superfamily protein)

HSP 1 Score: 67.0 bits (162), Expect = 1.4e-11
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 27 MGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
          +G +WPPR Y C+FC REFRSAQALGGHMNVHRR
Sbjct: 38 LGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]

BLAST of Carg25367 vs. Swiss-Prot
Match: sp|O80942|ZFP10_ARATH (Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1)

HSP 1 Score: 85.5 bits (210), Expect = 6.6e-16
Identity = 52/138 (37.68%), Postives = 75/138 (54.35%), Query Frame = 0


Query: 2   WNPNQAHRDDDDDDSWEIRAFAE-DTMGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
           W P ++++    + SWE  AFAE D  G+ WPPR Y C+FC REF+SAQALGGHMNVHRR
Sbjct: 8   WIPKKSNK----ESSWEELAFAEDDAAGSLWPPRSYTCSFCRREFKSAQALGGHMNVHRR 67

Query: 62  DRVRFRHENQ----PISSLTSSFTI--PATNVVYDGGGVCFFYQLPN---ENSNFLHSIS 121
           DR R +  +     P SS +  +     + N+         F   PN      + +  +S
Sbjct: 68  DRARLKQADDQYLFPKSSSSPEYPSHKDSDNIHETSCYTLVFNTKPNYFKTQHSCVIDLS 127

Query: 122 LHSATPYPSNNPIASSIP 130
             S+ PY + + ++S +P
Sbjct: 128 SSSSLPYLTPSRVSSGLP 141

[Close]

BLAST of Carg25367 vs. Swiss-Prot
Match: sp|Q9LHS9|RBE_ARATH (Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 GN=RBE PE=2 SV=2)

HSP 1 Score: 77.4 bits (189), Expect = 1.8e-13
Identity = 36/57 (63.16%), Postives = 42/57 (73.68%), Query Frame = 0


Query: 28 GTTWPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFRHENQPISSLTSSFTIPAT 85
          G  WPPR Y+C+FCGREF+SAQALGGHMNVHRRDR R + +     SL+ S T  AT
Sbjct: 47 GCMWPPRSYSCSFCGREFKSAQALGGHMNVHRRDRARLKQQ-----SLSPSSTDQAT 98

[Close]

BLAST of Carg25367 vs. Swiss-Prot
Match: sp|Q9SLB8|ZFP11_ARATH (Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 3.8e-11
Identity = 31/53 (58.49%), Postives = 37/53 (69.81%), Query Frame = 0


Query: 31 WPPRFYNCTFCGREFRSAQALGGHMNVHRRDRVRFR---------HENQPISS 75
          WPP+ Y C+FC REFRSAQALGGHMNVHRRDR + R         H + PI++
Sbjct: 44 WPPKNYTCSFCRREFRSAQALGGHMNVHRRDRAKLRQIPSWLFEPHHHTPIAN 96

[Close]

BLAST of Carg25367 vs. Swiss-Prot
Match: sp|Q38895|SUP_ARATH (Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 SV=1)

HSP 1 Score: 67.0 bits (162), Expect = 2.4e-10
Identity = 27/34 (79.41%), Postives = 30/34 (88.24%), Query Frame = 0


Query: 27 MGTTWPPRFYNCTFCGREFRSAQALGGHMNVHRR 61
          +G +WPPR Y C+FC REFRSAQALGGHMNVHRR
Sbjct: 38 LGFSWPPRSYTCSFCKREFRSAQALGGHMNVHRR 71

[Close]

BLAST of Carg25367 vs. Swiss-Prot
Match: sp|Q39266|ZFP7_ARATH (Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1)

HSP 1 Score: 52.4 bits (124), Expect = 6.2e-06
Identity = 27/74 (36.49%), Postives = 40/74 (54.05%), Query Frame = 0


Query: 22  FAEDTMGTTWP--PRFYNCTFCGREFRSAQALGGHMNVHRRDRV----------RFRHEN 81
           F +DT  T     PR ++C +C R+F S+QALGGH N H+R+R            F H +
Sbjct: 43  FNDDTKSTKCEANPRVFSCNYCRRKFYSSQALGGHQNAHKRERTMAKRAMHMGRMFGHHH 102

Query: 82  QPISSLTSSFTIPA 84
           +P +  +SS  + A
Sbjct: 103 RPYTYTSSSLGMQA 116

[Close]

BLAST of Carg25367 vs. TrEMBL
Match: tr|E2IBP9|E2IBP9_CUCSA (Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus OX=3659 GN=PALM1 PE=4 SV=1)

HSP 1 Score: 248.8 bits (634), Expect = 9.2e-63
Identity = 135/194 (69.59%), Postives = 154/194 (79.38%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNPNQAH+ D+DDDSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 1   MWNPNQAHQ-DEDDDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQP--ISSLTSSFTIPATNVVYDG-GGVCFFYQLPNENSNFLHSIS--- 120
           HRRDRVRF H+ QP  I  ++ SFTIP   ++Y+    VCF YQLPN+N NFL+SI+   
Sbjct: 61  HRRDRVRFHHQIQPNSIQPISPSFTIPTPKLIYNEIDEVCFLYQLPNDNINFLNSITSSD 120

Query: 121 --LHSA--TPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGAE 180
             L S+    +PS+   ASS+ SLK  GEL GGTSSSSSHCSH+SSKGD+SLISI+DG E
Sbjct: 121 SCLQSSFTAQHPSSTRTASSLQSLKSPGELRGGTSSSSSHCSHISSKGDDSLISINDGNE 180

[Close]

BLAST of Carg25367 vs. TrEMBL
Match: tr|A0A1S3BKB5|A0A1S3BKB5_CUCME (transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 PE=4 SV=1)

HSP 1 Score: 240.7 bits (613), Expect = 2.5e-60
Identity = 131/195 (67.18%), Postives = 150/195 (76.92%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           M NPNQAH+ D+D DSWEIRAFAEDT   MGTTWPPRFYNCTFCGREFRSAQALGGHMNV
Sbjct: 71  MLNPNQAHQ-DEDGDSWEIRAFAEDTGNIMGTTWPPRFYNCTFCGREFRSAQALGGHMNV 130

Query: 61  HRRDRVRFRHENQ--PISSLTSSFTIPATNVVYDG--GGVCFFYQLPNENSNFLHSISLH 120
           HRRDRVRF H+ Q   I  ++ SFTIP   ++Y+     VCF YQLPN+N +FL+SI+  
Sbjct: 131 HRRDRVRFHHQTQLNSIQHVSPSFTIPTPKLIYNNEIDEVCFLYQLPNDNIDFLNSITSS 190

Query: 121 -------SATPYPSNNPIASSIPSLKLSGEL-GGTSSSSSHCSHMSSKGDESLISIDDGA 180
                  S   +PS++  ASS+ SLK  GEL GGTSSSSSHCSHMSSKGD+SLISI+DG 
Sbjct: 191 GACLQSPSTAQHPSSSRTASSLQSLKSPGELRGGTSSSSSHCSHMSSKGDDSLISINDGN 250

[Close]

BLAST of Carg25367 vs. TrEMBL
Match: tr|A0A2N9EKI1|A0A2N9EKI1_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195 PE=4 SV=1)

HSP 1 Score: 172.6 bits (436), Expect = 8.3e-40
Identity = 108/206 (52.43%), Postives = 127/206 (61.65%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP QAH+  +DDDSWE+RAFAEDT   +GTTWPPR Y C FC REFRSAQALGGHMNV
Sbjct: 1   MWNPKQAHQ--EDDDSWEVRAFAEDTGNILGTTWPPRSYTCNFCRREFRSAQALGGHMNV 60

Query: 61  HRRDRVRFRHENQPIS--------SLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHS 120
           HRRDR R  H+ QP S        + TSS  IP+   + +GGG+C  YQLPN N+ F  S
Sbjct: 61  HRRDRARL-HQAQPSSINPITSSPNSTSSLIIPSQEFLANGGGLCLLYQLPNYNTAFPTS 120

Query: 121 I----------SLHSATPYPSNN---PIASSIPSLKLSGELGGTSSSSSHCSH-MSSKGD 179
                      +L S +PYP NN   P +S  P+    G   GT+ SSS  S+  SSK +
Sbjct: 121 TPINTCIESPSTLLSISPYPPNNLISPASSPPPTNFPLGPPRGTNPSSSSSSYCYSSKPE 180

[Close]

BLAST of Carg25367 vs. TrEMBL
Match: tr|A0A1Q3BM42|A0A1Q3BM42_CEPFO (Zf-C2H2_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_12598 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 7.3e-36
Identity = 99/211 (46.92%), Postives = 120/211 (56.87%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           MWNP QA   D +DDSWE+RAFAEDT   MGTTWPPR Y CTFC REFRSAQALGGHMNV
Sbjct: 34  MWNPKQAQAQDQEDDSWEVRAFAEDTGNSMGTTWPPRSYTCTFCRREFRSAQALGGHMNV 93

Query: 61  HRRDRVRFRHENQPISSL----------TSSFTIPATNVVYDGGGVCFFYQLPNENSNFL 120
           HRRDR +  H+ QP  S+          +S+  IP      +GG +C  YQLPN +  F 
Sbjct: 94  HRRDRAQL-HQTQPPRSINTAASSASISSSTLIIPTQEFATNGGRLCLLYQLPNPSGVFT 153

Query: 121 HSI---------SLHSATPYPSNNPIASSIPSLKLSGELGGTSSSSSHCSHMSSKGDESL 179
            ++         +L S +PYP NN I    PSL+L  ++     +SSHC    SK ++  
Sbjct: 154 PTLNACAVDSPSTLLSISPYPHNNLIGQ--PSLEL--QVAAQGLNSSHC--FFSKTEQPS 213

[Close]

BLAST of Carg25367 vs. TrEMBL
Match: tr|A0A2I4DWF2|A0A2I4DWF2_9ROSI (transcriptional regulator SUPERMAN-like OS=Juglans regia OX=51240 GN=LOC108984087 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 1.2e-35
Identity = 98/200 (49.00%), Postives = 119/200 (59.50%), Query Frame = 0


Query: 1   MWNPNQAHRDDDDDDSWEIRAFAEDT---MGTTWPPRFYNCTFCGREFRSAQALGGHMNV 60
           +W  N   +  +D+DSWE+RAFAEDT   MGTTWPPR Y CTFC REFRSAQALGGHMNV
Sbjct: 39  VWMWNSTMQPHEDEDSWEVRAFAEDTGNAMGTTWPPRSYTCTFCRREFRSAQALGGHMNV 98

Query: 61  HRRDRVRFRH------ENQPISSLTSSFTIPATNVVYDGGGVCFFYQLPNENSNFLHSI- 120
           HRRDR R          + P S  TSSF IP    V   GG+C  YQLP+ +     S  
Sbjct: 99  HRRDRARLHQAQPNPSSSSPTSPSTSSFIIPTQEFV-TNGGLCLLYQLPSPSGAAFSSTP 158

Query: 121 ---------SLHSATPYPSNNPIASSIPSLK--LSGELGGTSSSSSHCSHMSSKGDESLI 180
                    +L S +P P NN ++   PS+   LSG  G   ++SS C   S+K  E  +
Sbjct: 159 INACIESPSTLLSISPSPPNNLMSPCSPSINFPLSGSPG---TNSSRC--YSNKAIEPSL 218

The following BLAST results are available for this feature:

BLAST of Carg25367 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148758.1	1.4e-62	69.59	PREDICTED: transcriptional regulator SUPERMAN [Cucumis sativus] >ADO15281.1 palm...	[more]
XP_008448698.1	3.8e-60	67.18	PREDICTED: transcriptional regulator SUPERMAN-like [Cucumis melo]	[more]
XP_022145395.1	3.4e-53	63.96	zinc finger protein 11-like [Momordica charantia]	[more]
XP_004301687.1	8.5e-36	48.11	PREDICTED: transcriptional regulator SUPERMAN [Fragaria vesca subsp. vesca]	[more]
GAV69097.1	1.1e-35	46.92	zf-C2H2_6 domain-containing protein [Cephalotus follicularis]	[more]

BLAST of Carg25367 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G17810.1	2.7e-28	38.35	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G37740.1	3.7e-17	37.68	zinc-finger protein 10	[more]
AT5G06070.1	1.0e-14	63.16	C2H2 and C2HC zinc fingers superfamily protein	[more]
AT2G42410.1	2.1e-12	58.49	zinc finger protein 11	[more]
AT3G23130.1	1.4e-11	79.41	C2H2 and C2HC zinc fingers superfamily protein	[more]

BLAST of Carg25367 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|O80942\|ZFP10_ARATH	6.6e-16	37.68	Zinc finger protein 10 OS=Arabidopsis thaliana OX=3702 GN=ZFP10 PE=2 SV=1	[more]
sp\|Q9LHS9\|RBE_ARATH	1.8e-13	63.16	Probable transcriptional regulator RABBIT EARS OS=Arabidopsis thaliana OX=3702 G...	[more]
sp\|Q9SLB8\|ZFP11_ARATH	3.8e-11	58.49	Zinc finger protein 11 OS=Arabidopsis thaliana OX=3702 GN=ZFP11 PE=2 SV=1	[more]
sp\|Q38895\|SUP_ARATH	2.4e-10	79.41	Transcriptional regulator SUPERMAN OS=Arabidopsis thaliana OX=3702 GN=SUP PE=1 S...	[more]
sp\|Q39266\|ZFP7_ARATH	6.2e-06	36.49	Zinc finger protein 7 OS=Arabidopsis thaliana OX=3702 GN=ZFP7 PE=1 SV=1	[more]

BLAST of Carg25367 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|E2IBP9\|E2IBP9_CUCSA	9.2e-63	69.59	Palmate-like pentafoliata 1 transcription factor (Fragment) OS=Cucumis sativus O...	[more]
tr\|A0A1S3BKB5\|A0A1S3BKB5_CUCME	2.5e-60	67.18	transcriptional regulator SUPERMAN-like OS=Cucumis melo OX=3656 GN=LOC103490792 ...	[more]
tr\|A0A2N9EKI1\|A0A2N9EKI1_FAGSY	8.3e-40	52.43	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS3195 PE=4 SV=1	[more]
tr\|A0A1Q3BM42\|A0A1Q3BM42_CEPFO	7.3e-36	46.92	Zf-C2H2_6 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v...	[more]
tr\|A0A2I4DWF2\|A0A2I4DWF2_9ROSI	1.2e-35	49.00	transcriptional regulator SUPERMAN-like OS=Juglans regia OX=51240 GN=LOC10898408...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0003676	nucleic acid binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036236	Znf_C2H2_sf
IPR013087	Znf_C2H2_type

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003676	nucleic acid binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg25367-RA	Carg25367-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR013087	Zinc finger C2H2-type	SMART	SM00355	c2h2final6	coord: 36..58 e-value: 0.0036 score: 26.5
IPR013087	Zinc finger C2H2-type	PROSITE	PS00028	ZINC_FINGER_C2H2_1	coord: 38..58
IPR013087	Zinc finger C2H2-type	PROSITE	PS50157	ZINC_FINGER_C2H2_2	coord: 36..63 score: 11.759
None	No IPR available	PFAM	PF13912	zf-C2H2_6	coord: 36..59 e-value: 4.5E-7 score: 29.6
None	No IPR available	GENE3D	G3DSA:3.30.160.60		coord: 20..79 e-value: 9.3E-6 score: 27.3
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..160
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 136..155
None	No IPR available	PANTHER	PTHR26374:SF213	SUBFAMILY NOT NAMED	coord: 1..177
None	No IPR available	PANTHER	PTHR26374	FAMILY NOT NAMED	coord: 1..177
IPR036236	Zinc finger C2H2 superfamily	SUPERFAMILY	SSF57667	beta-beta-alpha zinc fingers	coord: 33..63

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg25367	CmaCh06G008490	Cucurbita maxima (Rimu)	carcmaB0677
Carg25367	CmoCh06G008760	Cucurbita moschata (Rifu)	carcmoB0658
Carg25367	Cp4.1LG00g02750	Cucurbita pepo (Zucchini)	carcpeB0682

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:

None