Carg27337-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg27337-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	IST1-like protein
Location	Cucurbita_argyrosperma_scaffold_326 : 65961 .. 67456 (+)
Sequence length	1152

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGAAGAACACTCGACGCTCTTCTTGGAAGAAATTTCAGAGCCTCCAAATTCCGCCCTCTTCTCAACCTCGCCCTCTCTCGTCTTGCCATTCTTACCAACCAACGCCGACTGAGGCGCTCCCAAGCTCAATCCGATGTTCTCCAACTCCTCCAACTCCACCACCAACAACGCGCCCTTCTTCGAGTTCGTTTCTCTATTTCCCTCCCCTTTTCATGTTTTGTTTCACTCATTTTGTTTTTTTTTTAATTTTTGTTGATTTCTTCTTTCTTGTTTTGATAGGTTGAGCAAGTGATCAAGGACCAGAATGCCTTGGATGCGTACGTTTTGATTGAAGGGTACCTCAATCTCTTGATCGAAAGGACCTCCCTCCTCGAACAACAAAGGTTTTCTTATTCTCCCTTAAAACATTCCTTGTTTTGTTTTGGATGAACGATTTTAGTGGATTTGATTTGATTTCATTTGTTATCGTTGAATGCAGAGACTGCCCTGAGGAATTGAAAGAGGCGATTGCAGGGTTGCTATTTGCTGCTTCCAGATGTGGGGATTTCCCTGAACTTCATGAGATTAAATCCGTTTTGACCTCTCGTTTTGGAAAGGAATTCACTGCTCGTGCAGTTGAATTACGCAACAACTGTGGAGTCAATCATTTGGTGAGTTTGTATTCGATTGTTCATTTTATATGCTCTGTTTCCTTATTCATCTTCTGCTCTGTTTTCTGTAGTTAATGCAGAAACTTTCCACGAGGCACCCAAATTTGGAGAGTAGAATGGATTTGCTCAAAACCATTGCTTCCGAGAATGGAATTACTCTGCAACTCGATGAAACTCCTCTTTCCAATGAGGTATTATTCAACTTAACCCTTATTATTATTATTATTTAAATGAAAATTGTAATTTTGTTTCTAATCATCACGTGAAAAGCAGGCCAGAAACTCGAGACAAAACCAATCGGAGCCACATGGCGGAGTGGGAGAGAATTTGAAATTCTCCACTGAAGTCCCATCTGGATCGAAACAAAAGTACAAAGATGTGGCGGATGCAGCACAGGCCGCTTTTGAATCGGCAGCTCAAGCAGCAGCTGCGGCCAGAGCTGCCATGGAGCTCTCCCGCTCTGAATCACAAGACCCTGATGGTCCAAGCAGCCCGGGCCCTGGGTCTGCAACAACTTCATATCACAAACAAGAGCAAAAGAAATCCGAGGTCGAAGCCAAACCCAAATCGGAAATCGAATATGAATATGGAAAAGAAGAAGAAGGCAGCAAAATCAGAGCAGAAGCAGAAGTAAAGAATTCAATGTGTGGTTGTTCTTCGAACAGAGAGTTGTTTGTTAAAGAAAACAGAGAGATGGATGAACAGAGAGCTACAAATATTGAAATTGGGGAGGAGATGGAAGCGAATTTAGAGAAGACAGAGATAACTGAGAAACCAAGCTTTCGTTTAAATCTGGAGAAGAAGCCAATTTCAGTGAGAACAAGAAGAGTGCGTGGATACTGA

mRNA sequence

ATGGGAAGAACACTCGACGCTCTTCTTGGAAGAAATTTCAGAGCCTCCAAATTCCGCCCTCTTCTCAACCTCGCCCTCTCTCGTCTTGCCATTCTTACCAACCAACGCCGACTGAGGCGCTCCCAAGCTCAATCCGATGTTCTCCAACTCCTCCAACTCCACCACCAACAACGCGCCCTTCTTCGAGTTGAGCAAGTGATCAAGGACCAGAATGCCTTGGATGCGTACGTTTTGATTGAAGGGTACCTCAATCTCTTGATCGAAAGGACCTCCCTCCTCGAACAACAAAGAGACTGCCCTGAGGAATTGAAAGAGGCGATTGCAGGGTTGCTATTTGCTGCTTCCAGATGTGGGGATTTCCCTGAACTTCATGAGATTAAATCCGTTTTGACCTCTCGTTTTGGAAAGGAATTCACTGCTCGTGCAGTTGAATTACGCAACAACTGTGGAGTCAATCATTTGTTAATGCAGAAACTTTCCACGAGGCACCCAAATTTGGAGAGTAGAATGGATTTGCTCAAAACCATTGCTTCCGAGAATGGAATTACTCTGCAACTCGATGAAACTCCTCTTTCCAATGAGGCCAGAAACTCGAGACAAAACCAATCGGAGCCACATGGCGGAGTGGGAGAGAATTTGAAATTCTCCACTGAAGTCCCATCTGGATCGAAACAAAAGTACAAAGATGTGGCGGATGCAGCACAGGCCGCTTTTGAATCGGCAGCTCAAGCAGCAGCTGCGGCCAGAGCTGCCATGGAGCTCTCCCGCTCTGAATCACAAGACCCTGATGGTCCAAGCAGCCCGGGCCCTGGGTCTGCAACAACTTCATATCACAAACAAGAGCAAAAGAAATCCGAGGTCGAAGCCAAACCCAAATCGGAAATCGAATATGAATATGGAAAAGAAGAAGAAGGCAGCAAAATCAGAGCAGAAGCAGAAGTAAAGAATTCAATGTGTGGTTGTTCTTCGAACAGAGAGTTGTTTGTTAAAGAAAACAGAGAGATGGATGAACAGAGAGCTACAAATATTGAAATTGGGGAGGAGATGGAAGCGAATTTAGAGAAGACAGAGATAACTGAGAAACCAAGCTTTCGTTTAAATCTGGAGAAGAAGCCAATTTCAGTGAGAACAAGAAGAGTGCGTGGATACTGA

Coding sequence (CDS)

ATGGGAAGAACACTCGACGCTCTTCTTGGAAGAAATTTCAGAGCCTCCAAATTCCGCCCTCTTCTCAACCTCGCCCTCTCTCGTCTTGCCATTCTTACCAACCAACGCCGACTGAGGCGCTCCCAAGCTCAATCCGATGTTCTCCAACTCCTCCAACTCCACCACCAACAACGCGCCCTTCTTCGAGTTGAGCAAGTGATCAAGGACCAGAATGCCTTGGATGCGTACGTTTTGATTGAAGGGTACCTCAATCTCTTGATCGAAAGGACCTCCCTCCTCGAACAACAAAGAGACTGCCCTGAGGAATTGAAAGAGGCGATTGCAGGGTTGCTATTTGCTGCTTCCAGATGTGGGGATTTCCCTGAACTTCATGAGATTAAATCCGTTTTGACCTCTCGTTTTGGAAAGGAATTCACTGCTCGTGCAGTTGAATTACGCAACAACTGTGGAGTCAATCATTTGTTAATGCAGAAACTTTCCACGAGGCACCCAAATTTGGAGAGTAGAATGGATTTGCTCAAAACCATTGCTTCCGAGAATGGAATTACTCTGCAACTCGATGAAACTCCTCTTTCCAATGAGGCCAGAAACTCGAGACAAAACCAATCGGAGCCACATGGCGGAGTGGGAGAGAATTTGAAATTCTCCACTGAAGTCCCATCTGGATCGAAACAAAAGTACAAAGATGTGGCGGATGCAGCACAGGCCGCTTTTGAATCGGCAGCTCAAGCAGCAGCTGCGGCCAGAGCTGCCATGGAGCTCTCCCGCTCTGAATCACAAGACCCTGATGGTCCAAGCAGCCCGGGCCCTGGGTCTGCAACAACTTCATATCACAAACAAGAGCAAAAGAAATCCGAGGTCGAAGCCAAACCCAAATCGGAAATCGAATATGAATATGGAAAAGAAGAAGAAGGCAGCAAAATCAGAGCAGAAGCAGAAGTAAAGAATTCAATGTGTGGTTGTTCTTCGAACAGAGAGTTGTTTGTTAAAGAAAACAGAGAGATGGATGAACAGAGAGCTACAAATATTGAAATTGGGGAGGAGATGGAAGCGAATTTAGAGAAGACAGAGATAACTGAGAAACCAAGCTTTCGTTTAAATCTGGAGAAGAAGCCAATTTCAGTGAGAACAAGAAGAGTGCGTGGATACTGA

Protein sequence

MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFESAAQAAAAARAAMELSRSESQDPDGPSSPGPGSATTSYHKQEQKKSEVEAKPKSEIEYEYGKEEEGSKIRAEAEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITEKPSFRLNLEKKPISVRTRRVRGY

Homology

[Close]

BLAST of Carg27337-RA vs. NCBI nr
Match: XP_022921602.1 (uncharacterized protein LOC111429814 [Cucurbita moschata])

HSP 1 Score: 557.4 bits (1435), Expect = 3.8e-155
Identity = 383/383 (100.00%), Postives = 383/383 (100.00%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL
Sbjct: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF
Sbjct: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN
Sbjct: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES 240
           GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES
Sbjct: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE 360
           XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE
Sbjct: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE 360

Query: 361 KPSFRLNLEKKPISVRTRRVRGY 384
           KPSFRLNLEKKPISVRTRRVRGY
Sbjct: 361 KPSFRLNLEKKPISVRTRRVRGY 383

[Close]

BLAST of Carg27337-RA vs. NCBI nr
Match: XP_022971762.1 (uncharacterized protein LOC111470447 [Cucurbita maxima])

HSP 1 Score: 537.0 bits (1382), Expect = 5.4e-149
Identity = 369/383 (96.34%), Postives = 376/383 (98.17%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGRTLDALLGRNFRASKFRPLLNLA+SRLAILTNQRRLRR+QAQSDVLQLLQLHHQQRAL
Sbjct: 1   MGRTLDALLGRNFRASKFRPLLNLAVSRLAILTNQRRLRRTQAQSDVLQLLQLHHQQRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIKDQNALDAYVL+EGYLNLLIERTSLLEQ+R+CPEELKEAIAGLLFAASRCGDF
Sbjct: 61  LRVEQVIKDQNALDAYVLMEGYLNLLIERTSLLEQERECPEELKEAIAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKSVLT+ FGKEFTARAVELRNNCGVNHLLMQKLSTR PNLESRMDLLKTIASEN
Sbjct: 121 PELHEIKSVLTTHFGKEFTARAVELRNNCGVNHLLMQKLSTRQPNLESRMDLLKTIASEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES 240
           GITLQLDETPLSNEARNSRQNQSEPHGGVGENLK STEVPSGSKQKYKDVADAAQAAFE 
Sbjct: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKLSTEVPSGSKQKYKDVADAAQAAFEX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE 360
           XXXXXXXXXXXXX  NSMCGCSSNRELFVKENREMDEQRA+NIEIGEEMEANLEKT ITE
Sbjct: 301 XXXXXXXXXXXXXVKNSMCGCSSNRELFVKENREMDEQRASNIEIGEEMEANLEKTAITE 360

Query: 361 KPSFRLNLEKKPISVRTRRVRGY 384
           KPSFRLNLEKKPISVRTRRVRGY
Sbjct: 361 KPSFRLNLEKKPISVRTRRVRGY 383

[Close]

BLAST of Carg27337-RA vs. NCBI nr
Match: XP_023538782.1 (uncharacterized protein LOC111799606 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 533.1 bits (1372), Expect = 7.8e-148
Identity = 372/383 (97.13%), Postives = 376/383 (98.17%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQL HQQRAL
Sbjct: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLRHQQRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQ+R+CPEELKEAIAGLLFAASRCGDF
Sbjct: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQERECPEELKEAIAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTR PNLESRMDLLKTIASEN
Sbjct: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRQPNLESRMDLLKTIASEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES 240
           GITLQLDETPLSNEARNS QNQ EPHG VGENLK STEVPSGSKQKYKDVADAAQAAFE 
Sbjct: 181 GITLQLDETPLSNEARNSSQNQPEPHGVVGENLKLSTEVPSGSKQKYKDVADAAQAAFEX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE 360
           XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRA+NIEIGEEMEANLEKTEITE
Sbjct: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRASNIEIGEEMEANLEKTEITE 360

Query: 361 KPSFRLNLEKKPISVRTRRVRGY 384
           KPSFRLNLEKKPISVRTRRVRG+
Sbjct: 361 KPSFRLNLEKKPISVRTRRVRGH 383

[Close]

BLAST of Carg27337-RA vs. NCBI nr
Match: XP_022921615.1 (uncharacterized protein LOC111429823 [Cucurbita moschata] >XP_022921623.1 uncharacterized protein LOC111429823 [Cucurbita moschata] >XP_022921631.1 uncharacterized protein LOC111429823 [Cucurbita moschata])

HSP 1 Score: 526.6 bits (1355), Expect = 7.3e-146
Identity = 356/383 (92.95%), Postives = 359/383 (93.73%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGRTLDALLGRNFRASKFRPLLNL LSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL
Sbjct: 1   MGRTLDALLGRNFRASKFRPLLNLTLSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIKDQNALDAYVLIEGYLNLLIER SLLEQ+R+CPEELKEA+AGLLFAASRCGDF
Sbjct: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERASLLEQERECPEELKEALAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKS LTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN
Sbjct: 121 PELHEIKSALTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFES 240
           GITLQLDETPLSNEARNSRQNQ E  GGVGENLKFSTEVPSGSKQKYKDVADAAQAAF  
Sbjct: 181 GITLQLDETPLSNEARNSRQNQPETDGGVGENLKFSTEVPSGSKQKYKDVADAAQAAFXX 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTEITE 360
           XXX            NSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEK EITE
Sbjct: 301 XXXEGSKVTPKPEVKNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKAEITE 360

Query: 361 KPSFRLNLEKKPISVRTRRVRGY 384
           KPSF LNLEKKPI VRT RVRGY
Sbjct: 361 KPSFGLNLEKKPILVRTGRVRGY 383

[Close]

BLAST of Carg27337-RA vs. NCBI nr
Match: XP_022139373.1 (uncharacterized protein LOC111010325 [Momordica charantia])

HSP 1 Score: 399.8 bits (1026), Expect = 1.0e-107
Identity = 305/392 (77.81%), Postives = 332/392 (84.69%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGR LDALLGRNFRASKFRPLLNLALSRLA+LTNQR +RRSQA+SD LQLLQL H  RAL
Sbjct: 1   MGRKLDALLGRNFRASKFRPLLNLALSRLAVLTNQRHVRRSQARSDALQLLQLGHHHRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIK+QNALDAYVLIEGYLNLLIERT LLEQ+R+CPEELKEA++GL+FAASRCGDF
Sbjct: 61  LRVEQVIKEQNALDAYVLIEGYLNLLIERTDLLEQERECPEELKEAVSGLIFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PEL EIKSVLT+RFGKEFTARAVELRNNCGV+H +MQKLSTR PNLESRM++L+ IASEN
Sbjct: 121 PELQEIKSVLTTRFGKEFTARAVELRNNCGVDHSIMQKLSTRQPNLESRMNVLEAIASEN 180

Query: 181 GITLQLDETPLSNE---ARNSRQN-QSEPHGGVGENLKFSTEVPSGS---KQKYKDVADA 240
            I LQLDE PLSNE   ARN RQN Q EP   VG+NL+FS +VPSGS   KQKYKDVADA
Sbjct: 181 NIVLQLDEHPLSNEEKFARNRRQNYQQEPKAEVGDNLQFSADVPSGSMQAKQKYKDVADA 240

Query: 241 AQAAFESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
           AQAAFESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 AQAAFESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANL 360
           XXXXXXXXXXXX          +     S +R     E+ EM+EQRA N+E G +ME   
Sbjct: 301 XXXXXXXXXXXXGSKITAEVKNSMPASFSPSR-----EDSEMEEQRAPNVETGLDMETET 360

Query: 361 --EKTEITEKPSFRLNLEKKPISVRTRRVRGY 384
             E TE T+KPSF LNLEKKP+SVRTRRVRG+
Sbjct: 361 KPELTEETQKPSFGLNLEKKPMSVRTRRVRGF 387

[Close]

BLAST of Carg27337-RA vs. TAIR10
Match: AT1G13340.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 218.8 bits (556), Expect = 5.9e-57
Identity = 122/232 (52.59%), Postives = 156/232 (67.24%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MG+ LDALLGR+F+ +KF+ L+ LAL+RL+IL NQR+ R SQA SDV +LL+L   + A 
Sbjct: 1   MGKKLDALLGRSFKTNKFKSLITLALTRLSILKNQRQARLSQAISDVTELLKLGQHEHAY 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
            RV+QV+KDQN LD    I GY  L ++R  L E  RDCPEEL EA++GLLFAASR G+F
Sbjct: 61  HRVDQVVKDQNTLDVLFFIHGYFTLCLDRIHLFEHNRDCPEELLEAVSGLLFAASRIGEF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PEL EI++VL SRFGK+  AR++ELR+NCGV+  ++QKLSTR P  E RM  LK IA+EN
Sbjct: 121 PELQEIRNVLISRFGKDLAARSIELRSNCGVDPKIIQKLSTRPPPKEVRMKALKEIAAEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSE-------PHGGVGENLKFSTEVPSGSKQ 226
            I L+LD+   S E   + Q  S+          G GE    S  V  G K+
Sbjct: 181 NIVLKLDQASTSTEGTTNMQGTSDVSKTKLTSKDGRGEGYGLSDSVKRGKKK 232

[Close]

BLAST of Carg27337-RA vs. TAIR10
Match: AT4G35730.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 132.5 bits (332), Expect = 5.5e-31
Identity = 67/183 (36.61%), Postives = 113/183 (61.75%), Query Frame = 0


Query: 7   ALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQV 66
           +L  R F +SK +    +A++R+ ++ N+R +   Q + D+  LLQ      A +RVE V
Sbjct: 20  SLFRRGFNSSKCKTAAKMAVARIKLIRNKRLVVVKQMRRDIAVLLQSGQDATARIRVEHV 79

Query: 67  IKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELHEI 126
           I++QN   A  +IE +  L++ R +++ +Q+ CP +LKE IA L+FAA RC + PEL ++
Sbjct: 80  IREQNIQAANEIIELFCELIVSRLTIITKQKQCPVDLKEGIASLIFAAPRCSEIPELGDL 139

Query: 127 KSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASENGITLQL 186
           + +   ++GK+F + A +LR +CGVN +L+ KLS R+P  E ++ ++K IA E  +    
Sbjct: 140 RDIFAKKYGKDFVSAATDLRPSCGVNRMLIDKLSVRNPGGEYKLKIMKEIAKEFQVDWDT 199

Query: 187 DET 190
            ET
Sbjct: 200 TET 202

[Close]

BLAST of Carg27337-RA vs. TAIR10
Match: AT2G19710.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 128.6 bits (322), Expect = 8.0e-30
Identity = 68/175 (38.86%), Postives = 113/175 (64.57%), Query Frame = 0


Query: 8   LLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVI 67
           +L R F+ +K +  L +A SRL IL N++ ++  Q + ++ QLL+      A +RVE V+
Sbjct: 4   VLQRGFKPAKCKTALQMANSRLKILKNKKEIQIKQLRRELAQLLESGQTPTARIRVEHVV 63

Query: 68  KDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELHEIK 127
           +++  + AY LI  Y  LL+ R  ++E Q++CP +LKEA+  +LFA+ R  D PEL EI 
Sbjct: 64  REEKTVAAYELIGIYCELLVVRLGVIESQKNCPIDLKEAVTSVLFASQRLSDVPELSEIF 123

Query: 128 SVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASENGI 183
              T+++GK+F+  AVELR + GV+ LL++KLS + P+  +++ +L  IA E+ +
Sbjct: 124 KQFTTKYGKDFSTSAVELRPDSGVSRLLVEKLSAKAPDGPTKVKILMAIAEEHNV 178

[Close]

BLAST of Carg27337-RA vs. TAIR10
Match: AT1G25420.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 125.6 bits (314), Expect = 6.8e-29
Identity = 69/197 (35.03%), Postives = 118/197 (59.90%), Query Frame = 0


Query: 5   LDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVE 64
           L+ L  R    +K +  LNLA++R+ +L N+R ++    + ++   LQ   +  A +RVE
Sbjct: 4   LNQLFNRGIFGAKCKTSLNLAIARMKLLQNKRDMQLKHMKKEIAHFLQAGQEPIARIRVE 63

Query: 65  QVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELH 124
            VI++ N   AY ++E +   ++ R  +LE +++CP EL+EAIA ++FAA RC + P+L 
Sbjct: 64  HVIREMNLWAAYEILELFCEFILARVPILESEKECPRELREAIASIIFAAPRCSEVPDLL 123

Query: 125 EIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASENGITL 184
           +IK++  +++GKEF   A ELR + GVN  +++KLS   P+  +R+ +LK IA E   +L
Sbjct: 124 QIKNLFGTKYGKEFIMVASELRPDSGVNRTIIEKLSPTSPSGAARLKMLKEIAQE--YSL 183

Query: 185 QLDETPLSNEARNSRQN 202
             D +    E   S ++
Sbjct: 184 NWDSSATEAEFMKSHED 198

[Close]

BLAST of Carg27337-RA vs. TAIR10
Match: AT1G34220.1 (Regulator of Vps4 activity in the MVB pathway protein)

HSP 1 Score: 115.9 bits (289), Expect = 5.4e-26
Identity = 70/220 (31.82%), Postives = 119/220 (54.09%), Query Frame = 0


Query: 5   LDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVE 64
           LD+   + F+A+K + LL L + R+ ++ N+R  +  Q + ++ +LL+   +  A +RVE
Sbjct: 4   LDSFFNKGFKAAKCKTLLKLTIPRIKLIRNRREAQIKQMRREIAKLLETGQEATARIRVE 63

Query: 65  QVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELH 124
            +I+++  + A  ++E +  L+  R  ++E QR+CP +LKEAI+ + FAA RC D  EL 
Sbjct: 64  HIIREEKMMAAQEILELFCELIAVRLPIIEAQRECPLDLKEAISSVCFAAPRCSDLTELQ 123

Query: 125 EIKSVLTSRFGKEFTARAVELRNNCGVNH------------------------------L 184
           +++ +  S++GKEF A A EL+ + GVN                                
Sbjct: 124 QVQILFVSKYGKEFVAAASELKPDSGVNRKTESLIFIAWFSLVETRDLFMFLYFSNSILQ 183

Query: 185 LMQKLSTRHPNLESRMDLLKTIASENGITLQLDETPLSNE 195
           L++ LS R P+ E+++ LLK IA E+    +LD  P S E
Sbjct: 184 LVELLSVRAPSPETKLKLLKEIAEEH----ELDWDPASTE 219

[Close]

BLAST of Carg27337-RA vs. Swiss-Prot
Match: sp|Q54I39|IST1L_DICDI (IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1)

HSP 1 Score: 70.9 bits (172), Expect = 3.6e-11
Identity = 52/174 (29.89%), Postives = 94/174 (54.02%), Query Frame = 0


Query: 10  GRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVIKD 69
           G ++ + K +  L LA+SR+ IL N++       + +V +LL+  +++ A +RVE +I+D
Sbjct: 5   GPSYDSYKLKVQLKLAVSRIQILKNKKANIVRDEKRNVAELLRKKNEESARIRVETIIRD 64

Query: 70  QNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDFPELHEIKSV 129
           +  ++ + +IE    LL  R +L+    + P E+KE+I  L++++ R    PEL +IK+ 
Sbjct: 65  EYLIECFQIIEVLCELLHARINLINATTEMPLEMKESIFTLVYSSQRI-QIPELEQIKNQ 124

Query: 130 LTSRFGKEFTARAVELRNNC----GVNHLLMQKLSTRHPNLESRMDLLKTIASE 180
           L +++GK      +E   NC     VN  ++ KLS   P+       L  IA +
Sbjct: 125 LKAKYGK-----GLENEANCHCSTHVNPKIVHKLSYATPDPSIIFQTLSEIAEK 172

[Close]

BLAST of Carg27337-RA vs. Swiss-Prot
Match: sp|P53990|IST1_HUMAN (IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 8   LLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVI 67
           +LG  F+A + R  L L ++RL +L  ++     +A+ ++   L     +RA +RVE +I
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 68  KDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRC-GDFPELHEI 127
           ++   ++A  ++E Y +LL+ R  L++  ++    L E+++ L++AA R   +  EL  +
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 128 KSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHP 165
              L +++ KE+  +         VN  LM KLS   P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAP 157

[Close]

BLAST of Carg27337-RA vs. Swiss-Prot
Match: sp|Q9CX00|IST1_MOUSE (IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 8   LLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVI 67
           +LG  F+A + R  L L ++RL +L  ++     +A+ ++   L     +RA +RVE +I
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 68  KDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRC-GDFPELHEI 127
           ++   ++A  ++E Y +LL+ R  L++  ++    L E+++ L++AA R   +  EL  +
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 128 KSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHP 165
              L +++ KE+  +         VN  LM KLS   P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAP 157

[Close]

BLAST of Carg27337-RA vs. Swiss-Prot
Match: sp|Q568Z6|IST1_RAT (IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 2.3e-10
Identity = 44/158 (27.85%), Postives = 83/158 (52.53%), Query Frame = 0


Query: 8   LLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVI 67
           +LG  F+A + R  L L ++RL +L  ++     +A+ ++   L     +RA +RVE +I
Sbjct: 1   MLGSGFKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 68  KDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRC-GDFPELHEI 127
           ++   ++A  ++E Y +LL+ R  L++  ++    L E+++ L++AA R   +  EL  +
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 128 KSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHP 165
              L +++ KE+  +         VN  LM KLS   P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAP 157

[Close]

BLAST of Carg27337-RA vs. Swiss-Prot
Match: sp|Q3ZBV1|IST1_BOVIN (IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1)

HSP 1 Score: 65.9 bits (159), Expect = 1.1e-09
Identity = 43/158 (27.22%), Postives = 82/158 (51.90%), Query Frame = 0


Query: 8   LLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRALLRVEQVI 67
           +LG   +A + R  L L ++RL +L  ++     +A+ ++   L     +RA +RVE +I
Sbjct: 1   MLGSGIKAERLRVNLRLVINRLKLLEKKKTELAQKARKEIADYLAAGKDERARIRVEHII 60

Query: 68  KDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRC-GDFPELHEI 127
           ++   ++A  ++E Y +LL+ R  L++  ++    L E+++ L++AA R   +  EL  +
Sbjct: 61  REDYLVEAMEILELYCDLLLARFGLIQSMKELDSGLAESVSTLIWAAPRLQSEVAELKIV 120

Query: 128 KSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHP 165
              L +++ KE+  +         VN  LM KLS   P
Sbjct: 121 ADQLCAKYSKEY-GKLCRTNQIGTVNDRLMHKLSVEAP 157

[Close]

BLAST of Carg27337-RA vs. TrEMBL
Match: tr|A0A1S3BD83|A0A1S3BD83_CUCME (uncharacterized protein LOC103488606 OS=Cucumis melo OX=3656 GN=LOC103488606 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.4e-89
Identity = 183/233 (78.54%), Postives = 204/233 (87.55%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGR LDALLGRNFRASKFRPLLNL+LSRL+ILT+QRRLR SQA SDVLQLLQL H  RAL
Sbjct: 1   MGRKLDALLGRNFRASKFRPLLNLSLSRLSILTSQRRLRCSQANSDVLQLLQLSHHHRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVE+VIKDQNALDAYVLIEGYLNLL+ERT+LLEQQ +CPEELKEA+AGLLFAASRCGDF
Sbjct: 61  LRVEKVIKDQNALDAYVLIEGYLNLLLERTTLLEQQSECPEELKEAVAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKSVLT+RFGKEFTARAVELRNNCGVN  LMQKLSTR P LE+RM++LK+IASEN
Sbjct: 121 PELHEIKSVLTTRFGKEFTARAVELRNNCGVNLSLMQKLSTRQPTLETRMEVLKSIASEN 180

Query: 181 GITLQLDETPLSNE---ARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDV 231
           GI LQ D+ P SNE   AR+ RQ+++E     G + KFS EV S SK++YKDV
Sbjct: 181 GIVLQFDQLPHSNEEKVARSGRQSEAE-----GRSEKFSNEVASDSKKRYKDV 228

[Close]

BLAST of Carg27337-RA vs. TrEMBL
Match: tr|A0A0A0KAU0|A0A0A0KAU0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032470 PE=4 SV=1)

HSP 1 Score: 337.0 bits (863), Expect = 5.4e-89
Identity = 274/386 (70.98%), Postives = 299/386 (77.46%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MGR LDALLGRNFRASKFRPLLNL+LSRL+ILT QRR+  SQA SDVLQLLQL H  RAL
Sbjct: 1   MGRKLDALLGRNFRASKFRPLLNLSLSRLSILTAQRRVGCSQANSDVLQLLQLSHHHRAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVE+VIKDQNALDAYVLIEGYLNLL+ERT+LLEQQ +CPEELKEA+AGLLFAASRCGDF
Sbjct: 61  LRVEKVIKDQNALDAYVLIEGYLNLLLERTTLLEQQSECPEELKEAVAGLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PELHEIKSVLT+RFGKEFTARAVELRNNCGVN  LMQKLSTR P LE+RMD LK+IASEN
Sbjct: 121 PELHEIKSVLTTRFGKEFTARAVELRNNCGVNLSLMQKLSTRQPTLETRMDALKSIASEN 180

Query: 181 GITLQLDETPLSNE---ARNSRQNQSEPHGGVGENLKFSTEVPSGSKQKYKDVADAAQAA 240
           GI LQ+D+ P S +    RN RQ+++E     G++ +FS EV SGSK  YKDVA      
Sbjct: 181 GIVLQIDQLPSSKQEKVGRNGRQSEAE-----GQSEEFSNEVASGSKTTYKDVA------ 240

Query: 241 FESXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300
                           XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 241 ----------------XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 300

Query: 301 XXXXXXXXXXXXXXXXXXNSMCGCSSNRELFVKENREMDEQRATNIEIGEEMEANLEKTE 360
           XXXXXXXXXXXXXXXXXX                       R +N   G +ME  +EKTE
Sbjct: 301 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTSN---GLKMETKVEKTE 356

Query: 361 ITEKPSFRLNLEKKPISVRTRRVRGY 384
           ++EK SFRLNLEKKPISVRTRRV GY
Sbjct: 361 VSEKGSFRLNLEKKPISVRTRRVGGY 356

[Close]

BLAST of Carg27337-RA vs. TrEMBL
Match: tr|A0A151QR33|A0A151QR33_CAJCA (IST1-like protein OS=Cajanus cajan OX=3821 GN=KK1_046528 PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.0e-71
Identity = 157/253 (62.06%), Postives = 187/253 (73.91%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MG+ LDALLGR F+ASKF+  +NLA SR+A+L NQR  R   A+SDVL+LLQL HQ+RA 
Sbjct: 1   MGKKLDALLGRTFKASKFKATVNLATSRIAVLKNQRHARLRHARSDVLELLQLGHQERAS 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LR E VIKDQN LD Y +IEGY NLLIER  L+EQ+R+CPEELKEA +GLL+AASRCGDF
Sbjct: 61  LRAEHVIKDQNMLDVYDMIEGYCNLLIERVHLIEQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PE+ EI+ VLT+RFGKEF ARA+ELRNNCGV+  ++QK+STR P+LE RM  LK IASEN
Sbjct: 121 PEIQEIRGVLTTRFGKEFAARAIELRNNCGVHPQIIQKMSTRMPSLEIRMKALKDIASEN 180

Query: 181 GITLQLDETPLSNEARNS--RQNQSEPH-----------GGVGENLKFSTEVPSGSKQKY 240
           GI LQL+ET +S E   +  +QN  EP             G  E L  S +     +QKY
Sbjct: 181 GIVLQLEETSVSVEEHFNLEKQNLHEPEKKEENASILPSRGKDEELTDSFK----GRQKY 240

[Close]

BLAST of Carg27337-RA vs. TrEMBL
Match: tr|V7CHA4|V7CHA4_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G082300g PE=4 SV=1)

HSP 1 Score: 278.1 bits (710), Expect = 3.0e-71
Identity = 154/251 (61.35%), Postives = 193/251 (76.89%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MG+ LDALLGR F+A+KF+ ++NLA+SRLA+L NQR+ R   A+SDVL+LLQ  H +RA 
Sbjct: 1   MGKKLDALLGRTFKAAKFKAIVNLAISRLAVLKNQRQSRLRHARSDVLELLQQGHLERAS 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVE VIKDQN LD Y  IEGY NLLIER  L+EQ+R+CPEELKEA +GLL+AASRCGDF
Sbjct: 61  LRVEHVIKDQNMLDVYDRIEGYCNLLIERIHLIEQERECPEELKEAASGLLYAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PE+ EI++VL SRFGKEF AR++ELRNNCGV+  ++QK+STR P+LESR+ +LK IASEN
Sbjct: 121 PEIQEIRAVLNSRFGKEFAARSIELRNNCGVHPQMIQKMSTRMPSLESRIKVLKDIASEN 180

Query: 181 GITLQLDETPLSNEARNSRQNQSEPHGGVGENLKFSTEVPSGSK-----------QKYKD 240
           GI LQL+ET +S E ++  + Q++ HG   +    S  +PSG K           +KYKD
Sbjct: 181 GIVLQLEETTVSVEVQSEVEMQNQ-HGPEKKEENISI-LPSGGKNEELTNSFTGGKKYKD 240

[Close]

BLAST of Carg27337-RA vs. TrEMBL
Match: tr|A0A1Q3AUG0|A0A1Q3AUG0_CEPFO (Ist1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_02724 PE=4 SV=1)

HSP 1 Score: 276.2 bits (705), Expect = 1.1e-70
Identity = 151/250 (60.40%), Postives = 191/250 (76.40%), Query Frame = 0


Query: 1   MGRTLDALLGRNFRASKFRPLLNLALSRLAILTNQRRLRRSQAQSDVLQLLQLHHQQRAL 60
           MG+ LDALLGR F+ +KF+PL NLA+SRLA+L  QR +R SQA+SDVLQLL+  H +RAL
Sbjct: 1   MGKKLDALLGRTFKTNKFKPLANLAISRLAVLKQQRHVRCSQARSDVLQLLEQGHHERAL 60

Query: 61  LRVEQVIKDQNALDAYVLIEGYLNLLIERTSLLEQQRDCPEELKEAIAGLLFAASRCGDF 120
           LRVEQVIK+QN LD +V+ E Y NL+IER  L+EQ+R+CP+ELKEAI+ LLFAASRCGDF
Sbjct: 61  LRVEQVIKEQNMLDVFVMTESYCNLVIERVHLIEQERECPDELKEAISSLLFAASRCGDF 120

Query: 121 PELHEIKSVLTSRFGKEFTARAVELRNNCGVNHLLMQKLSTRHPNLESRMDLLKTIASEN 180
           PEL EI+ + TSR+GKEF ARA+ELRNNCGVNH ++QKLSTR P+LESRM  LK IA+E 
Sbjct: 121 PELQEIRVLFTSRYGKEFAARAIELRNNCGVNHRMIQKLSTRMPDLESRMKFLKEIAAEK 180

Query: 181 GITLQLDE-TPLSNEARN--SRQNQSEPHGGVGENLKFSTEVPS-------GSKQKYKDV 240
            I LQL+E + LS E +   S+ + S     +G+++  + E  +        ++ KYKDV
Sbjct: 181 SIVLQLEEGSSLSTEEKTNVSKASTSSGSATLGDDMPMAPEDNNEGFSDSMKARTKYKDV 240

The following BLAST results are available for this feature:

BLAST of Carg27337-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022921602.1	3.8e-155	100.00	uncharacterized protein LOC111429814 [Cucurbita moschata]	[more]
XP_022971762.1	5.4e-149	96.34	uncharacterized protein LOC111470447 [Cucurbita maxima]	[more]
XP_023538782.1	7.8e-148	97.13	uncharacterized protein LOC111799606 [Cucurbita pepo subsp. pepo]	[more]
XP_022921615.1	7.3e-146	92.95	uncharacterized protein LOC111429823 [Cucurbita moschata] >XP_022921623.1 unchar...	[more]
XP_022139373.1	1.0e-107	77.81	uncharacterized protein LOC111010325 [Momordica charantia]	[more]

BLAST of Carg27337-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT1G13340.1	5.9e-57	52.59	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT4G35730.1	5.5e-31	36.61	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT2G19710.1	8.0e-30	38.86	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G25420.1	6.8e-29	35.03	Regulator of Vps4 activity in the MVB pathway protein	[more]
AT1G34220.1	5.4e-26	31.82	Regulator of Vps4 activity in the MVB pathway protein	[more]

BLAST of Carg27337-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54I39\|IST1L_DICDI	3.6e-11	29.89	IST1-like protein OS=Dictyostelium discoideum OX=44689 GN=DDB_G0289029 PE=3 SV=1	[more]
sp\|P53990\|IST1_HUMAN	2.3e-10	27.85	IST1 homolog OS=Homo sapiens OX=9606 GN=IST1 PE=1 SV=1	[more]
sp\|Q9CX00\|IST1_MOUSE	2.3e-10	27.85	IST1 homolog OS=Mus musculus OX=10090 GN=Ist1 PE=1 SV=1	[more]
sp\|Q568Z6\|IST1_RAT	2.3e-10	27.85	IST1 homolog OS=Rattus norvegicus OX=10116 GN=Ist1 PE=2 SV=1	[more]
sp\|Q3ZBV1\|IST1_BOVIN	1.1e-09	27.22	IST1 homolog OS=Bos taurus OX=9913 GN=IST1 PE=2 SV=1	[more]

BLAST of Carg27337-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BD83\|A0A1S3BD83_CUCME	5.4e-89	78.54	uncharacterized protein LOC103488606 OS=Cucumis melo OX=3656 GN=LOC103488606 PE=...	[more]
tr\|A0A0A0KAU0\|A0A0A0KAU0_CUCSA	5.4e-89	70.98	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G032470 PE=4 SV=1	[more]
tr\|A0A151QR33\|A0A151QR33_CAJCA	3.0e-71	62.06	IST1-like protein OS=Cajanus cajan OX=3821 GN=KK1_046528 PE=4 SV=1	[more]
tr\|V7CHA4\|V7CHA4_PHAVU	3.0e-71	61.35	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_002G082300g PE=4 ...	[more]
tr\|A0A1Q3AUG0\|A0A1Q3AUG0_CEPFO	1.1e-70	60.40	Ist1 domain-containing protein OS=Cephalotus follicularis OX=3775 GN=CFOL_v3_027...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Biological Process**
Term	Definition
GO:0015031	protein transport

Vocabulary: **INTERPRO**
Term	Definition
IPR005061	Ist1

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0015031	protein transport
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg27337	Carg27337	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg27337-RA	Carg27337-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27337-RA.exon.1	Carg27337-RA.exon.1	exon
Carg27337-RA.exon.2	Carg27337-RA.exon.2	exon
Carg27337-RA.exon.3	Carg27337-RA.exon.3	exon
Carg27337-RA.exon.4	Carg27337-RA.exon.4	exon
Carg27337-RA.exon.5	Carg27337-RA.exon.5	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg27337-RA.CDS.1	Carg27337-RA.CDS.1	CDS
Carg27337-RA.CDS.2	Carg27337-RA.CDS.2	CDS
Carg27337-RA.CDS.3	Carg27337-RA.CDS.3	CDS
Carg27337-RA.CDS.4	Carg27337-RA.CDS.4	CDS
Carg27337-RA.CDS.5	Carg27337-RA.CDS.5	CDS

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR005061	Vacuolar protein sorting-associated protein Ist1	PFAM	PF03398	Ist1	coord: 21..182 e-value: 3.9E-49 score: 166.6
IPR005061	Vacuolar protein sorting-associated protein Ist1	PANTHER	PTHR12161	UNCHARACTERIZED DUF292	coord: 1..380
None	No IPR available	GENE3D	G3DSA:1.20.1260.60		coord: 6..195 e-value: 3.7E-60 score: 204.7
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 259..278
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 249..307
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 279..307
None	No IPR available	PANTHER	PTHR12161:SF16	REGULATOR OF VPS4 ACTIVITY IN THE MVB PATHWAY PROTEIN	coord: 1..380