Carg24745-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGCGATGGCGCTATGGCGTTGGATGCCATCTCCCCTTCTTTCTGGGTTAGAACAGCCATGAAAGTATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCATTACCAAAATGGATCGAGATCTGATCTCGGGCCAAATCCTTTCGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGACTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGAATCATTATCGAATCCAGGGAGATGGGAACAGTCTTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTAATCATCATCAACATGCTAATGTCTCTTAATTGATTTTGAGCTGGAACCATAGCCATGAAATGTACTTTATTACCTCTAATCTGACTACTTTTATTGAACATAATTCAGGTACTTGCAGTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGCAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGTCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCGAGCAGTCCACACCGACATCAACCCCGAAAGTCGACCCGATAACAGCAATACAGGACTTCCAAAAGACGACCCAGTAAGTAATCTTTCTTTTCCTGGTATAGGAAGCACTACAGAAGGAAACTCGAAAAGAACCGTTTCGTTTACGAGCGATCGGGAACTAAAATACTTCCGTTTGCCTTCGATTTTTCAGGAATGTTGCATTTGCCTTGCAAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTAAGCAACAACTTCAGAGATAAGAGCGCCAAGAAAGCAGCCGTTGATGAAATTCGGGGGAAAAACGGAACCGATCACTATACTGGGGGCGAGACATGATCACGACGGAAGATTCGAGTACCGTTGAAAAGACCAAAGGAACGGGGGGAATGACTGCCTGTAATAATGCACAGGCTAATACGAGCCGACTAGAAGAAGCAAGTCTTAGATTACCGAATCTTGGACACAATCTTCTTAGAGAGAGCCCCTTGCCTCGCCTTTTCTCGTTTAGATTAGAGTCTCACATTGGTTAGGTTACTTGAGTGAGTTCTAGTGCTCACCAGTTACCTAAATATACTGAAATACTGAATGGATACATATAGCAAGAAATTGATGCCTTATCTGTAGATATTATGAGAACTATAGTATTTGTGTAATGAATACAAACCAAGTGTGCTTTTTCCCACTTCATGCCTCAGAACTTGTTTGTTACACCTATGAACCGTCTCCTCGTCCCCGACTCCGTCCCCATCCCTGACATGTTTAGCTGTGTAAAGTTTGTTTGGAAAGAACCTGTTGGAAAACGAAGAAAACTCAAAGAAACGAGTATTGTGAGATCCCACGTCGGTTGGAGAGGAGAATGAAGGATTCCTTATAAGGGTGTAGAAACCTCTCCCTAATAGACGTTTTAAAACTGTGAGGTTGACTGCGATATGTAACGGGCCAAAGCGGACAATATCCACTAGCGGTGGGCTTGAGTTGTTACAAATGGTATCAGAGTCAAACACCGAGTAGTGTGCTAGTGAGGACGCTGACCCCTATAGTGAGTGACCCACATCAGTTGGAGAGGAGAACGAAGCATTCCGGTGTACTAGTGAGGATGTTGACCCCTGTGGGGGGTGACCCATATCAGTTGGAGAGGAGAACGAAGCATTCCAGTGTGCTAGTGAGGATGCTGACCCCTATGGGAAGTGACTCATATCAGTTGGAGAGGAGAACGAAGCATTCCGGTGTGCTAGTGAGGATGCTGACCCTTATAGGGTGACCCACATCAGTTGGAGACGAGAATGAAACATTCCTTATAAGGGTATGGAAACCTCTCCCTAGCAGACGTGTTCTAAAACCGTGAGGTTGATAGCAATACATAACAGACAATTTTTGCTAGCGGTAGACTTGAGTTGTTACAAGTATGAAGGTTCCCTTACTCCCGCTCTCCTTTGATTAAAGATTCTAGTTTCCCACTCGTACTCGGTTTCATAAAGACCTTTCTAAGGGTGATTTCGTGGCACCAAAACTCATTCTCGACTACGAGAAGTTCTTTCCCTTAGTCTCAAACTTAGTACCTGAATACCAAAATTTAACGACTTCAACACTACTTTATTGATATTAAGTTCAATAATTAAACAATTATACAAAGAATATTATCGAACGTGTTCATATGAATCATATTTATTTTCTCGAGATAACTTCGAGCATTCAACTAATTAAAACATCAAATGAACGTTGTTATACGAAAACGATATCTTACCTTGTGAGTAGCCACCCTCTCCTTCTCTCCTACCTTCAAAACATAGATTTATCAACTAAGTTAAATAGGCAAGCAGTCAATATCAAGAACACCTTTTATTATTATTATTATTATTAAATTTTAATTTAAAAAATGGATTTTCGTAGAAGAAAATGATTTCCGACCATTCAAATAATTGTATTTAAATTCGTAATAATTACAATATTTAATCTACCGACTTATAATTATGAGTTGTTGAAAACATTTTTTTTAATTAAAAAAAAGTCTGAAATTAGGTATAATTTCATAAATTAAAAGCTAAGTTAGATCAATTAGCATACTTTATAAACAAATAATATATATATATATATATAAACAAACCTGCCGTGGATTGTGACACCATGTTAGATAAACTCGTCTCTCCACAACAGTAAACCTATGATCATTCCTTAAACTAGCCGACGTGGGACTTTCATCCAACACCTCCCCTGATCATTCCCTAACTAGCCGATGTGGGACTTTCATCCAACACCTCCCCTCGAACAAAGTACGTCTCTCCTAAATCGAGGCTCGACTCCTTTTTCTTTGGTATGACATTGTCCACTTTGAGCATAAGCTCTCTCATGGTAAACCCATGATCATTTTCCTAAATTAGCCGACCCCTTAATTGAGGCTCGACTCCTTTTTCTTTTAAAGTCTTTTGTTCGACATTTGGGGATGGGCTAAGTATAGGGCATGACTCTGATACCATGTTAGATAAACACAACTCTCCACAATGGTATACTATTATCCACTCTTGACAATAAGCTCTCATGGCTTTGCTGTGGGCTTTCCCAAAAGGTCTCATACCAATAGAGATAGTATCATTTGATTATAAACCCACGATCATTCCCTAACTTAGTCAATGTGGGACTTTCATTCAACACACCACGTGTTTCTAATACGAATTCGTGCTTGTCTACTAGTATGACTTGAGGAGAAGATAGGGCAGCTCAACTCCCCGAAGGATGAACCACTAGGAAGTATATTTAAGTCAAAATTCTCTTCAAGGTCTCACACAACTTATTTGACTAACCGGGTGACCTACCCTCCTTTTTTCTTGGCTATAACCCCAAAGAATTGGGATATATATCTATACACACAAACGCGTGTGTGTATATATATATATATATATATATATTATATATATATATATTTTTTTTAATTTAGCGTTGAAAAAAATATATTTTAAATTAAAGAATAGTAATAAATTTTGAATAAAGAAAAGCGGTTGAGAAAGATGGAGGAATTGGGGTTTTGACAGTTGAACGAAACGGTCGATTGTTGGGGGTTTGCTTGCTTTGTTAACAAAAAGCTGCAACAAAGTTTGGCCAATCCAATCCAATCCAATCCAATCCAATCCTATCCTATCCTTGACGCCACCATTCTCAAACCTCCGATTCATTCCCTTTCAATCGAAGTTACCCACTTCCCCTTCGTTTTCTCTTCTTGATCCTCAGTCCCCATCTCATTTCACCTTCCTCTCCTTTTTTCCACCATTTCCGACAGCTCCCCTTCGCCTATTTCCTTCTATTTACACTTCCATGTCCCCTTTTCCCTCTTTCTTTCCCCTTTTCCCCAATGCCTTTGACCCTTATCCAATTTACCCATTAAAACCCAACTGGGTCTTCCTCGTCGGTGGGTCTCTGTGTTTTTTTTTTTTTTCCCTTTTGTTCTGATCTCTTTTGGGTGATGAACTGATGATGTTTATGTTTGTAGATTGCTTTCCAGGTTTGATCTGGACTGACACGGTTGAGAAGCTCGGGCGGGTGGATTTCGAGTAAGTGTTTTGATTTTGTGCACGATAGGTGTTTGATGTTTTGCCTGGCTGAGTGATCATATGGTTTTGGCTTGGAATTTTCTTGAATTGAATGGATAATTGGTGGGTTGTTTTGTTCATTCATTGTGGGAGAAAGTTCTGTGGTTTTAGCTGTCATGATTGTCAAGTTGGTGTTTGATGATTTGCCTTGCTGAGTGATCATATGGTTTTGGCTTGGGATTTTCATGAATTTGAATAGATAATTGGTGGGTTGTTTTGTTCATTCCTTGTGGGTGAATGTTCTGTGTTTTGGCTATCATGATTGTCAAGTTGGCTCTTGAATCTCCATGAAAGCACTTTGTTTTTTATGTTTGTGCTGAATCCAAGCTGTTTTTTTGTGTTGTACTAGATAAGGAAAGGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTTCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTTGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAGATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTCTTTCTCGTCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGGTATTCCTTAACATGCTACTTTCTCTATATTAGAGTGGATAAAGCAGCTGATGGAGGATAAACAAGGTCTACTTTCTCTCTAGTATAAGAAATTTAGAATCATTTAGAAGTTAGCTGAAAGTACAACCAAAAAATGCTGCTTTTCTTGTTCTGTTTAATTGGTGTTAGGAATCACGAACCTCCACAATAGTATGATATTGTCCACTTTGAGCATGAGCTCTCGTGACTTTGCTTTGAACTTCCCCAGAAGGCCTAATACTAAATGGAGATCTATTCCTTACTTATAAACCCATGATCGTTCCCTAAATTAGCTAACGTGGGACTCCCTCTCAACAATCCTCAACCATTGAAACCGACTCATTTAGAATGTGGATGCACTTATCTACAACTCCAATTCAATACGATGTGCAGGAGCTTGCGCTTGATGAACAAATGTCGGTCGTCTCTTGAACTTTTCTTTGCCATATGGTTCGTAATGGGCAATGTTTGGATCGTCGATTCTCGCTTCGATTCTTTCCAAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGTAAGTGAAGCATATAATATATACTTGCAATGAAGAATTTGACTGAGTTTGTTTGTTTTCTTGTGCTGTTCTTGTAGGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAAAAATCACTTCAAATTCTGTTCTTTTTTGTTCCCACACATGAATTAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTG ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGCGATGGCGCTATGGCGTTGGATGCCATCTCCCCTTCTTTCTGGGTTAGAACAGCCATGAAAGTATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCATTACCAAAATGGATCGAGATCTGATCTCGGGCCAAATCCTTTCGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGACTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGAATCATTATCGAATCCAGGGAGATGGGAACAGTCTTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTACTTGCAGTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGCAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGTCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCGAGCAGTCCACACCGACATCAACCCCGAAAGTCGACCCGATAACAGCAATACAGGACTTCCAAAAGACGACCCAGAATGTTGCATTTGCCTTGCAAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTTTGATCTGGACTGACACGGTTGAGAAGCTCGGGCGGGTGGATTTCGAGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTTCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTTGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAGATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTCTTTCTCGTCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAAAAATCACTTCAAATTCTGTTCTTTTTTGTTCCCACACATGAATTAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTGAATGAGTTG ATGATTCATTCTGGTTTCTTCCTTTCGGGTCCATCGCTTAATTCTGATGCTACTACGTCTTTCATATCGATTCCGGTGTCTGGAGGCGATGGCGCTATGGCGTTGGATGCCATCTCCCCTTCTTTCTGGGTTAGAACAGCCATGAAAGTATCTAGAGCCAGATGGTTCATTTTCTTGAGAAGAGTTTTCCATTACCAAAATGGATCGAGATCTGATCTCGGGCCAAATCCTTTCGATTCGGGTTCGTGGATGGTGATGGAACTTGTAGCTCTGTTATTTCAGCTAATCATCTCAGTGATTACTCTTGCCATTTCACAGACTGAGAGGCCAGTTTGGCCTATGAGATTGTGGATAGGTGGTTATGATCTTGGCTGTGTTCTTAGCTTATTGGTTCTCTATGGCCGCCATCGGAATCATTATCGAATCCAGGGAGATGGGAACAGTCTTTCGGATATCGAACACGAACAGCAGAGGAGTAATGAATCATCAAGGTACTTGCAGTTGATGAACAAATGTCGCACGTCTCTTGATCTTTTCTTCGCGATATGGTTCGTAATGGGCAATCTTTGGGTCCTCGATTCTCGCTTCGCCTCGTTCGAAAGAGCTCCCAAGCTACATCTACTATGCAGCTTCCTGCTAGTTTGGAATGTCATCTGCTACTCTTTCCCATTCATTCTGTTTCTGCTGCTTTGTTGCTGTGTGCCATTGATTAGTAGCCTTATAGGATATAACATTAACATGGGATCAACCGAAAAAGGAGCGTTGGACGATCAAATCTCCCAGCTACCTTACTGGAGATACCGAGCAGTCCACACCGACATCAACCCCGAAAGTCGACCCGATAACAGCAATACAGGACTTCCAAAAGACGACCCAGAATGTTGCATTTGCCTTGCAAAGTACATAGACAAGGAAGAAGTGAGACAGTTGCCTTGTTCCCATGTGTTTCATCTCAAGTGTGTAGATAAGTGGCTTGCTATTGCATCTTCATGCCCTCTCTGTTTGATCTGGACTGACACGGTTGAGAAGCTCGGGCGGGTGGATTTCGAGTCGTTTTCAATGATCAATTCTGGTTATTTCATTTCGGGGCCTTCGTGTAACTACAATGGCACTGCTTCCTTTATCTCGAATTTGTTGGTGGAAGAAGATGGTGCAGGTGCAGATGTTAGAGATGACAATTCTGTTTCTCTCCCTGCATCTTTCTGGGTTAGGGTAGCAATGAGGGTGTCTAGAGCCAGGTGGTTCATTTTCTTACGAAGAGTATTTCACTACCAGAATGGATCGAGGTCAGATCTCGGGTCCGATCCTTTCAATTCTAGCTCGTGGATGGCTATGGAACTGATAGCTATGGTGTTTCAGCTGGCCATCACTGTGTTCTTTCTCGTCATTTCAGAGACAGAGAAGCCTGTTTGGCCTATGAGACTGTGGATAGTTGGTTACGATCTTGGCTGCGTTCTTAGCTTGTTGCTTCTCTACGGACGATATTGGCACGTTTATTTAATGCCGCGCGTTGGCCTTCCCGACATCGAGCAGCGGAGGAGCAGTCAAGCATCAAGAGCTCCCAAGCTTCATCTGCTATGTGTCTTCCTGTTAGTTTGGAATGCCATCTGCTACTCTTTTCCATTCATACTTTTTCTTCTGCTATGTTGCTGTGTGCCATTGATTAGTAGCCTTCTCGGGTATAACATTAACATGGCATCGACCGACAAAGGCGCATCGGATGATCAAATATCCGAGCTACCTTGCTGGAGATATAAAGCAAGCTCAAAACAACCTGATAGTAACAACAAAGGACTTCCAAAGGAGGATCCAGAATGTTGCATTTGCTTAGTGAAATACAGAGATGAAGAAGAAGTAAGAGAGTTGCCTTGTTCGCATTTGTTCCATCTCAAGTGTGTAGATAAGTGGCTATCGATCACATCTTCCTGCCCTCTCTGTAAGCAACAACTTCAAAGATAA MIHSGFFLSGPSLNSDATTSFISIPVSGGDGAMALDAISPSFWVRTAMKVSRARWFIFLRRVFHYQNGSRSDLGPNPFDSGSWMVMELVALLFQLIISVITLAISQTERPVWPMRLWIGGYDLGCVLSLLVLYGRHRNHYRIQGDGNSLSDIEHEQQRSNESSRYLQLMNKCRTSLDLFFAIWFVMGNLWVLDSRFASFERAPKLHLLCSFLLVWNVICYSFPFILFLLLCCCVPLISSLIGYNINMGSTEKGALDDQISQLPYWRYRAVHTDINPESRPDNSNTGLPKDDPECCICLAKYIDKEEVRQLPCSHVFHLKCVDKWLAIASSCPLCLIWTDTVEKLGRVDFESFSMINSGYFISGPSCNYNGTASFISNLLVEEDGAGADVRDDNSVSLPASFWVRVAMRVSRARWFIFLRRVFHYQNGSRSDLGSDPFNSSSWMAMELIAMVFQLAITVFFLVISETEKPVWPMRLWIVGYDLGCVLSLLLLYGRYWHVYLMPRVGLPDIEQRRSSQASRAPKLHLLCVFLLVWNAICYSFPFILFLLLCCCVPLISSLLGYNINMASTDKGASDDQISELPCWRYKASSKQPDSNNKGLPKEDPECCICLVKYRDEEEVRELPCSHLFHLKCVDKWLSITSSCPLCKQQLQR
BLAST of Carg24745-RA vs. NCBI nr
Match: XP_022936090.1 (E3 ubiquitin-protein ligase At1g63170-like [Cucurbita moschata]) HSP 1 Score: 680.6 bits (1755), Expect = 5.1e-192 Identity = 329/334 (98.50%), Postives = 329/334 (98.50%), Query Frame = 0
BLAST of Carg24745-RA vs. NCBI nr
Match: XP_023536376.1 (E3 ubiquitin-protein ligase At4g11680-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 640.6 bits (1651), Expect = 5.9e-180 Identity = 312/334 (93.41%), Postives = 316/334 (94.61%), Query Frame = 0
BLAST of Carg24745-RA vs. NCBI nr
Match: XP_022976005.1 (E3 ubiquitin-protein ligase At4g11680-like [Cucurbita maxima]) HSP 1 Score: 610.9 bits (1574), Expect = 5.0e-171 Identity = 300/336 (89.29%), Postives = 305/336 (90.77%), Query Frame = 0
BLAST of Carg24745-RA vs. NCBI nr
Match: XP_008463025.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680 isoform X1 [Cucumis melo]) HSP 1 Score: 604.0 bits (1556), Expect = 6.1e-169 Identity = 291/341 (85.34%), Postives = 307/341 (90.03%), Query Frame = 0
BLAST of Carg24745-RA vs. NCBI nr
Match: XP_011659087.1 (PREDICTED: E3 ubiquitin-protein ligase At4g11680-like isoform X1 [Cucumis sativus] >KGN44388.1 hypothetical protein Csa_7G278230 [Cucumis sativus]) HSP 1 Score: 596.7 bits (1537), Expect = 9.7e-167 Identity = 288/341 (84.46%), Postives = 304/341 (89.15%), Query Frame = 0
BLAST of Carg24745-RA vs. TAIR10
Match: AT4G26580.1 (RING/U-box superfamily protein) HSP 1 Score: 402.5 bits (1033), Expect = 4.9e-112 Identity = 191/323 (59.13%), Postives = 240/323 (74.30%), Query Frame = 0
BLAST of Carg24745-RA vs. TAIR10
Match: AT5G55970.1 (RING/U-box superfamily protein) HSP 1 Score: 381.7 bits (979), Expect = 8.9e-106 Identity = 184/294 (62.59%), Postives = 221/294 (75.17%), Query Frame = 0
BLAST of Carg24745-RA vs. TAIR10
Match: AT4G32600.1 (RING/U-box superfamily protein) HSP 1 Score: 182.6 bits (462), Expect = 8.0e-46 Identity = 105/301 (34.88%), Postives = 160/301 (53.16%), Query Frame = 0
BLAST of Carg24745-RA vs. TAIR10
Match: AT1G80400.1 (RING/U-box superfamily protein) HSP 1 Score: 182.2 bits (461), Expect = 1.0e-45 Identity = 106/309 (34.30%), Postives = 168/309 (54.37%), Query Frame = 0
BLAST of Carg24745-RA vs. TAIR10
Match: AT1G68070.1 (Zinc finger, C3HC4 type (RING finger) family protein) HSP 1 Score: 119.0 bits (297), Expect = 1.1e-26 Identity = 71/261 (27.20%), Postives = 131/261 (50.19%), Query Frame = 0
BLAST of Carg24745-RA vs. Swiss-Prot
Match: sp|Q93Z92|RING4_ARATH (E3 ubiquitin-protein ligase At4g11680 OS=Arabidopsis thaliana OX=3702 GN=At4g11680 PE=2 SV=1) HSP 1 Score: 119.0 bits (297), Expect = 1.9e-25 Identity = 79/270 (29.26%), Postives = 131/270 (48.52%), Query Frame = 0
BLAST of Carg24745-RA vs. Swiss-Prot
Match: sp|Q8GUU2|RIE1_ARATH (E3 ubiquitin protein ligase RIE1 OS=Arabidopsis thaliana OX=3702 GN=RIE1 PE=2 SV=1) HSP 1 Score: 115.2 bits (287), Expect = 2.8e-24 Identity = 74/263 (28.14%), Postives = 132/263 (50.19%), Query Frame = 0
BLAST of Carg24745-RA vs. Swiss-Prot
Match: sp|Q9LN71|RING1_ARATH (E3 ubiquitin-protein ligase At1g12760 OS=Arabidopsis thaliana OX=3702 GN=At1g12760 PE=1 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 4.5e-22 Identity = 76/303 (25.08%), Postives = 139/303 (45.87%), Query Frame = 0
BLAST of Carg24745-RA vs. Swiss-Prot
Match: sp|Q8LDB8|RING2_ARATH (E3 ubiquitin-protein ligase At1g63170 OS=Arabidopsis thaliana OX=3702 GN=At1g63170 PE=2 SV=2) HSP 1 Score: 95.1 bits (235), Expect = 3.0e-18 Identity = 54/161 (33.54%), Postives = 83/161 (51.55%), Query Frame = 0
BLAST of Carg24745-RA vs. Swiss-Prot
Match: sp|Q9M0R4|ATL37_ARATH (Putative RING-H2 finger protein ATL37 OS=Arabidopsis thaliana OX=3702 GN=ATL37 PE=3 SV=1) HSP 1 Score: 72.8 bits (177), Expect = 1.6e-11 Identity = 52/170 (30.59%), Postives = 80/170 (47.06%), Query Frame = 0
BLAST of Carg24745-RA vs. TrEMBL
Match: tr|A0A1S3CI94|A0A1S3CI94_CUCME (E3 ubiquitin-protein ligase At4g11680 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1) HSP 1 Score: 604.0 bits (1556), Expect = 4.0e-169 Identity = 291/341 (85.34%), Postives = 307/341 (90.03%), Query Frame = 0
BLAST of Carg24745-RA vs. TrEMBL
Match: tr|A0A0A0K4H0|A0A0A0K4H0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278230 PE=4 SV=1) HSP 1 Score: 596.7 bits (1537), Expect = 6.4e-167 Identity = 288/341 (84.46%), Postives = 304/341 (89.15%), Query Frame = 0
BLAST of Carg24745-RA vs. TrEMBL
Match: tr|A0A1S3CIA1|A0A1S3CIA1_CUCME (E3 ubiquitin-protein ligase At4g11680 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103501269 PE=4 SV=1) HSP 1 Score: 555.4 bits (1430), Expect = 1.6e-154 Identity = 261/301 (86.71%), Postives = 277/301 (92.03%), Query Frame = 0
BLAST of Carg24745-RA vs. TrEMBL
Match: tr|A0A1S3CIP5|A0A1S3CIP5_CUCME (E3 ubiquitin-protein ligase At4g11680-like OS=Cucumis melo OX=3656 GN=LOC103501270 PE=4 SV=1) HSP 1 Score: 508.4 bits (1308), Expect = 2.3e-140 Identity = 257/339 (75.81%), Postives = 273/339 (80.53%), Query Frame = 0
BLAST of Carg24745-RA vs. TrEMBL
Match: tr|A0A0A0K7S5|A0A0A0K7S5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G278220 PE=4 SV=1) HSP 1 Score: 505.4 bits (1300), Expect = 2.0e-139 Identity = 255/337 (75.67%), Postives = 274/337 (81.31%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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