Carg04635 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTCTGTTCCCTCTTAAACCTCCCCATTTTCTTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGTCAGTTTCTTCTCCCTCCCGATCTCTCAAATTCTCCATCGAATCTTTGTTTTTCTTTCTAGATCTGTAACTGAATCGCTCATTGATTTGATCTTTCTTGTTTCAGGCTATGGAAATTGCAGATTCCCATCTAGGTAAAAACTTTCTCCATGATCTTTAAACACCCTGTTTCGATTTAGGGAACAATTGATGTCCGTAATCAAGAAATTAATCATCAACCGTCAACGAATCTCCGACTTTAAAGCCTTTTTTTCCAGTTTTAAAGTGATCGATTTCTCTCATTTATGGCGCAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA CTCTGTTCCCTCTTAAACCTCCCCATTTTCTTTCTCTCTCTAAAACGCCTCTCTCCTACCAATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA ATGGAGATCGATTTAGCTCTTTTTCTCCTCATTGCCCTGATTATCTGCAGCGCGGCGGAGCCCCAGCATCCGTCGATCAAAGGCCAAGGCGGCGCGACGGAGCTCTGGTGCGTGGCCAAGAACAACGCCGACGACGCCTCTCTGCAATCCGCACTCGACTGGGCCTGCGGCGCTGGCGGCTCCGACTGTTCCCCAATCCAGCGTAGTGGCGCCTGCTACGACGCCTCCAATGTCCAGAACATGGCCTCCTTCGCCTTCAACGACTACTTCCTCAAACACGGCATGACTGACGATAGTTGCTTCTTTCAAAATTCCGCCGCTATCACTTCCTTAAACCCTAGCTATGGAAATTGCAGATTCCCATCTAGTTCGTTGAGAAATGGGAACTTCTCAAGCCAATCCACATCCGTAGGGCTGGGGCCAAGCGAAGACCTAAGCGGATCGGGTCGAAAATCGGGTCGGATATGGGTTTGGCCCATAGCAATCGGGTATTTGTTCTTTAAAATTATGTTTCTAATTTAA MEIDLALFLLIALIICSAAEPQHPSIKGQGGATELWCVAKNNADDASLQSALDWACGAGGSDCSPIQRSGACYDASNVQNMASFAFNDYFLKHGMTDDSCFFQNSAAITSLNPSYGNCRFPSSSLRNGNFSSQSTSVGLGPSEDLSGSGRKSGRIWVWPIAIGYLFFKIMFLI
BLAST of Carg04635 vs. NCBI nr
Match: XP_022930875.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 341.7 bits (875), Expect = 1.5e-90 Identity = 170/173 (98.27%), Postives = 171/173 (98.84%), Query Frame = 0
BLAST of Carg04635 vs. NCBI nr
Match: XP_022989094.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 330.1 bits (845), Expect = 4.5e-87 Identity = 162/173 (93.64%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Carg04635 vs. NCBI nr
Match: XP_023529864.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 327.4 bits (838), Expect = 2.9e-86 Identity = 160/173 (92.49%), Postives = 167/173 (96.53%), Query Frame = 0
BLAST of Carg04635 vs. NCBI nr
Match: XP_022930876.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 324.3 bits (830), Expect = 2.5e-85 Identity = 160/165 (96.97%), Postives = 162/165 (98.18%), Query Frame = 0
BLAST of Carg04635 vs. NCBI nr
Match: XP_022930877.1 (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like isoform X3 [Cucurbita moschata]) HSP 1 Score: 323.9 bits (829), Expect = 3.2e-85 Identity = 160/163 (98.16%), Postives = 161/163 (98.77%), Query Frame = 0
BLAST of Carg04635 vs. TAIR10
Match: AT3G58100.1 (plasmodesmata callose-binding protein 5) HSP 1 Score: 146.4 bits (368), Expect = 1.7e-35 Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of Carg04635 vs. TAIR10
Match: AT1G29380.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 95.9 bits (237), Expect = 2.6e-20 Identity = 46/87 (52.87%), Postives = 60/87 (68.97%), Query Frame = 0
BLAST of Carg04635 vs. TAIR10
Match: AT4G05430.1 (Carbohydrate-binding X8 domain superfamily protein) HSP 1 Score: 94.7 bits (234), Expect = 5.8e-20 Identity = 47/99 (47.47%), Postives = 60/99 (60.61%), Query Frame = 0
BLAST of Carg04635 vs. TAIR10
Match: AT1G11820.2 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 93.2 bits (230), Expect = 1.7e-19 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of Carg04635 vs. TAIR10
Match: AT2G05790.1 (O-Glycosyl hydrolases family 17 protein) HSP 1 Score: 91.7 bits (226), Expect = 4.9e-19 Identity = 41/87 (47.13%), Postives = 52/87 (59.77%), Query Frame = 0
BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9M2K6|PDCB5_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Arabidopsis thaliana OX=3702 GN=PDCB5 PE=2 SV=2) HSP 1 Score: 146.4 bits (368), Expect = 3.0e-34 Identity = 71/132 (53.79%), Postives = 94/132 (71.21%), Query Frame = 0
BLAST of Carg04635 vs. Swiss-Prot
Match: sp|O65399|E131_ARATH (Glucan endo-1,3-beta-glucosidase 1 OS=Arabidopsis thaliana OX=3702 GN=At1g11820 PE=2 SV=3) HSP 1 Score: 93.2 bits (230), Expect = 3.0e-18 Identity = 51/116 (43.97%), Postives = 70/116 (60.34%), Query Frame = 0
BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9C7U5|E132_ARATH (Glucan endo-1,3-beta-glucosidase 2 OS=Arabidopsis thaliana OX=3702 GN=At1g66250 PE=2 SV=2) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16 Identity = 48/139 (34.53%), Postives = 74/139 (53.24%), Query Frame = 0
BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9M069|E137_ARATH (Glucan endo-1,3-beta-glucosidase 7 OS=Arabidopsis thaliana OX=3702 GN=At4g34480 PE=1 SV=2) HSP 1 Score: 87.4 bits (215), Expect = 1.7e-16 Identity = 46/105 (43.81%), Postives = 60/105 (57.14%), Query Frame = 0
BLAST of Carg04635 vs. Swiss-Prot
Match: sp|Q9SD84|PDCB2_ARATH (PLASMODESMATA CALLOSE-BINDING PROTEIN 2 OS=Arabidopsis thaliana OX=3702 GN=PDCB2 PE=1 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 2.2e-16 Identity = 45/111 (40.54%), Postives = 66/111 (59.46%), Query Frame = 0
BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A1S3BN12|A0A1S3BN12_CUCME (PLASMODESMATA CALLOSE-BINDING PROTEIN 5 OS=Cucumis melo OX=3656 GN=LOC103491346 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.5e-70 Identity = 136/172 (79.07%), Postives = 151/172 (87.79%), Query Frame = 0
BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0A0KHV2|A0A0A0KHV2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G420530 PE=4 SV=1) HSP 1 Score: 270.4 bits (690), Expect = 2.8e-69 Identity = 133/171 (77.78%), Postives = 147/171 (85.96%), Query Frame = 0
BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A1S3W152|A0A1S3W152_VIGRR (PLASMODESMATA CALLOSE-BINDING PROTEIN 5-like OS=Vigna radiata var. radiata OX=3916 GN=LOC106780627 PE=4 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 1.1e-46 Identity = 97/155 (62.58%), Postives = 118/155 (76.13%), Query Frame = 0
BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0L9V5Z7|A0A0L9V5Z7_PHAAN (Uncharacterized protein OS=Phaseolus angularis OX=3914 GN=LR48_Vigan08g093100 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46 Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 0
BLAST of Carg04635 vs. TrEMBL
Match: tr|A0A0S3SB55|A0A0S3SB55_PHAAN (Uncharacterized protein OS=Vigna angularis var. angularis OX=157739 GN=Vigan.06G120700 PE=4 SV=1) HSP 1 Score: 193.7 bits (491), Expect = 3.3e-46 Identity = 97/155 (62.58%), Postives = 117/155 (75.48%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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