Carg18674 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGAACAAAGTTAAAATGTAGGCCATAGTTGTGGTTAATAGGTTTAGTATCATCGAGTCCAAAATAATTAATACAATCCATTCTTCACTTGATTCATTCATCTGATCAATTATTATTTGTTGGGTACCGTTTTTATTGGTTAAAATTTTCGATTTGACCTAATAAACGCATATCGTCAAATATTTAATTAAATCAAATTTTGATATTAATTAGGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA ATGAACAAAGTTAAAATGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA ATGAACAAAGTTAAAATGTGGTCACAAATAGCTGCACGTCTTCCCGGGCGAACGGACAACGAAATAAAGAATCTATGGAACTCCTCGTTGAAGAAGAGATTGAAGAATCACAGTAACATCTCTTCTCCAAACCCTAGCGAGTCTTCCGAACTTCGAAGTAGCAACAGCTTCGGGGAGCTAACCGAAAACATCATTCCGACCCACGAACACAAACACAACAACGTCATGAACATGTTCATGAAAAGCTCATCGTTCTCATGCTCAACATCCATGAGTACTCCATCCATGTTTCTACAAAACTACATCCCTTGTGATCCATTCCCGACATTATTGGACAACGACGGATACAACATGGTTGGTGGTGCAATGGAAGAGGGGTATTATGGGGATTACAGCCGAACAATATTCGAGCCGAGAGGGTTAGTCAGGGACAATTATGACTTTTCCCACCTCCCTCCGCTTGCAAATGGAGACATTATCGAGGAGATTAAGGTACCATCGATAAATATAAAAGAAAACAACCAAAATAATATCGAAGAATTCAATAATGATTGCTTCGATTATAATAACGAGATGAGTTTTAAGGCGGAGGGTATATTTGGAAATAATTATCAAACCGAGCTGCAAGAGAACTCGAAAATAGGAGGCTGGGATTTGGACGGTTTTATCCTTGATTTCCAAATGGATTAA MNKVKMWSQIAARLPGRTDNEIKNLWNSSLKKRLKNHSNISSPNPSESSELRSSNSFGELTENIIPTHEHKHNNVMNMFMKSSSFSCSTSMSTPSMFLQNYIPCDPFPTLLDNDGYNMVGGAMEEGYYGDYSRTIFEPRGLVRDNYDFSHLPPLANGDIIEEIKVPSINIKENNQNNIEEFNNDCFDYNNEMSFKAEGIFGNNYQTELQENSKIGGWDLDGFILDFQMD
BLAST of Carg18674 vs. NCBI nr
Match: XP_022953992.1 (transcription factor MYB83 [Cucurbita moschata]) HSP 1 Score: 452.6 bits (1163), Expect = 8.0e-124 Identity = 222/223 (99.55%), Postives = 222/223 (99.55%), Query Frame = 0
BLAST of Carg18674 vs. NCBI nr
Match: XP_023549385.1 (transcription factor MYB83 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 412.1 bits (1058), Expect = 1.2e-111 Identity = 204/223 (91.48%), Postives = 212/223 (95.07%), Query Frame = 0
BLAST of Carg18674 vs. NCBI nr
Match: XP_022991916.1 (transcription factor MYB83-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 367.9 bits (943), Expect = 2.6e-98 Identity = 189/228 (82.89%), Postives = 199/228 (87.28%), Query Frame = 0
BLAST of Carg18674 vs. NCBI nr
Match: XP_022991917.1 (transcription factor MYB83-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 251.9 bits (642), Expect = 2.1e-63 Identity = 130/162 (80.25%), Postives = 137/162 (84.57%), Query Frame = 0
BLAST of Carg18674 vs. NCBI nr
Match: XP_022151936.1 (transcription factor MYB83-like [Momordica charantia]) HSP 1 Score: 243.8 bits (621), Expect = 5.6e-61 Identity = 149/235 (63.40%), Postives = 170/235 (72.34%), Query Frame = 0
BLAST of Carg18674 vs. TAIR10
Match: AT3G08500.1 (myb domain protein 83) HSP 1 Score: 68.2 bits (165), Expect = 7.7e-12 Identity = 75/248 (30.24%), Postives = 103/248 (41.53%), Query Frame = 0
BLAST of Carg18674 vs. TAIR10
Match: AT5G12870.1 (myb domain protein 46) HSP 1 Score: 59.7 bits (143), Expect = 2.7e-09 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of Carg18674 vs. TAIR10
Match: AT4G01680.2 (myb domain protein 55) HSP 1 Score: 57.0 bits (136), Expect = 1.8e-08 Identity = 25/29 (86.21%), Postives = 28/29 (96.55%), Query Frame = 0
BLAST of Carg18674 vs. TAIR10
Match: AT1G09540.1 (myb domain protein 61) HSP 1 Score: 54.3 bits (129), Expect = 1.1e-07 Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of Carg18674 vs. TAIR10
Match: AT1G16490.1 (myb domain protein 58) HSP 1 Score: 53.1 bits (126), Expect = 2.6e-07 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9C6U1|MYB83_ARATH (Transcription factor MYB83 OS=Arabidopsis thaliana OX=3702 GN=MYB83 PE=2 SV=1) HSP 1 Score: 68.2 bits (165), Expect = 1.4e-10 Identity = 75/248 (30.24%), Postives = 103/248 (41.53%), Query Frame = 0
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9LXV2|MYB46_ARATH (Transcription factor MYB46 OS=Arabidopsis thaliana OX=3702 GN=MYB46 PE=2 SV=1) HSP 1 Score: 59.7 bits (143), Expect = 4.9e-08 Identity = 28/35 (80.00%), Postives = 31/35 (88.57%), Query Frame = 0
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q8VZQ2|MYB61_ARATH (Transcription factor MYB61 OS=Arabidopsis thaliana OX=3702 GN=MYB61 PE=2 SV=1) HSP 1 Score: 54.3 bits (129), Expect = 2.1e-06 Identity = 61/203 (30.05%), Postives = 94/203 (46.31%), Query Frame = 0
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|P20027|MYB3_HORVU (Myb-related protein Hv33 OS=Hordeum vulgare OX=4513 GN=MYB2 PE=2 SV=3) HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06 Identity = 22/29 (75.86%), Postives = 26/29 (89.66%), Query Frame = 0
BLAST of Carg18674 vs. Swiss-Prot
Match: sp|Q9SA47|MYB58_ARATH (Transcription factor MYB58 OS=Arabidopsis thaliana OX=3702 GN=MYB58 PE=2 SV=1) HSP 1 Score: 53.1 bits (126), Expect = 4.6e-06 Identity = 25/57 (43.86%), Postives = 38/57 (66.67%), Query Frame = 0
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A1S3CED2|A0A1S3CED2_CUCME (transcription factor MYB46 OS=Cucumis melo OX=3656 GN=LOC103499922 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 6.9e-31 Identity = 109/235 (46.38%), Postives = 125/235 (53.19%), Query Frame = 0
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A061E379|A0A061E379_THECC (Myb domain protein 83 OS=Theobroma cacao OX=3641 GN=TCM_005885 PE=4 SV=1) HSP 1 Score: 134.4 bits (337), Expect = 3.2e-28 Identity = 109/249 (43.78%), Postives = 137/249 (55.02%), Query Frame = 0
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A2N9FKZ2|A0A2N9FKZ2_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS15750 PE=4 SV=1) HSP 1 Score: 126.7 bits (317), Expect = 6.6e-26 Identity = 103/239 (43.10%), Postives = 133/239 (55.65%), Query Frame = 0
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A151RZW4|A0A151RZW4_CAJCA (Transcription factor MYB46 OS=Cajanus cajan OX=3821 GN=KK1_030281 PE=4 SV=1) HSP 1 Score: 109.8 bits (273), Expect = 8.4e-21 Identity = 96/242 (39.67%), Postives = 127/242 (52.48%), Query Frame = 0
BLAST of Carg18674 vs. TrEMBL
Match: tr|A0A2I4FS05|A0A2I4FS05_9ROSI (transcription factor MYB46-like OS=Juglans regia OX=51240 GN=LOC109001541 PE=4 SV=1) HSP 1 Score: 107.8 bits (268), Expect = 3.2e-20 Identity = 100/239 (41.84%), Postives = 127/239 (53.14%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene: |