Carg18666 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.AGGAGGGAGAGAGAGAGAGGGAGGGAGAGATCCCTAACGCACAATCAAAAATTCAAAATCTCTAAATCTCTCGCAAATATGGCATTTCACGTAGCTTGTCCAATTACATGGTATACACACTTCCCCTCTTCTTTTTTTTTTTTTTTTTTTTTTTTCATTTTTTTTTTCTTTCTTCTAATCCCATTTTTCTTCTCTCTTTCTTTTGCTTTCTTTTGGGTGTTCTCTCTTTCGTTGCCGTTTGGCTCTTCTTTCTCTCAACTACCCATCTCGTTTGTTTTTTGCTTCGAAACCTCACATGGGTTTGTTTTTCTGTGTTGTGTAGTCGAAGGATTTGCTTCTGTGCGCTAGGATTTGAGCCGGGTTTGCAGAATGGGAGAGTTAAGAATGAGTTTCTTGATGGGGTGCGTAAGGTGGAGGAGTTTCTCAACGATCCTTGGGGAATTAGGGTTAGAGATGGGAAGGGAGCGACGGTTCAGGTCTGGGTTCCGAAGGTTGCGCCGCCTCCCCCACCAGTGCAGCCTGTTGGGGTTGTTGGTGAGGCGTTTATTAGTGGAGCTGATGGGGTCGATGAAATGGCGGCGGCGATGTCGGCTCAGACGAAGCGTATTGCGCTTCAGCGTAAGGCTGCTGCTGCTATGATTGCTGCTGAGGACTATGCCAGGCGATTTGAATCTGGGAGTTTAGTGGTGAGGGTTTTAGTTTGGATTGTTTTCTTTACCATGTTGAAGATTTGACTCTGTGTTCTTGGTTAATTGATTATGTTCTTGTTGTAAAAATTGTTGTGGAGTAGAAGCTTAGTGTAGGGATTTGTTCTTCCTGTTGTTTTGATGCTGAATTTAGCTAGCTTGATCTTTGCTGATTAGCCAGCGCTTATGGTAAGTCATTAGCCCTTTGGTCCTTTTGAATACTTGAACATGCTCCGGATAGATGTTGGGATTTAGTGAGAAATCTATTGAAAATACAAAAAATTTACTTAGGATTAATGCAGCTGCTGATGGAAAGTATATAGTTATTAGATATTTACTAGATCAGTGAATGACCTGTGCTGTGAGGGCTGCTTCTCATGCCCGAACTCCCTCAGGTTCTCCTTCAGTTCGGAATGTCATTTACGAGACATTTTTAAAGCGCCCTGTCTGCTGTAGTTCTAATCGTGTTTTTTTCACCTTGAACAGGATGCCTCCGGTAGTCTCGTGGGGGAAGAGCAGGGGCAGTCGAATGTGAATGTAATGTGTAGAATATGTTTTGTTGGTGAAAATGAATCTAGTGAGAGAACACGGAGGATGCTTTCGTGCAAAACTTGTGGCAAAAAGTACCATCGCAACTGCTTGAAATCCTGGGCTCAACATAGGGGTAAGGTGTGGTCACGAGTTTATTTTTAG AGGAGGGAGAGAGAGAGAGGGAGGGAGAGATCCCTAACGCACAATCAAAAATTCAAAATCTCTAAATCTCTCGCAAATATGGCATTTCACGTAGCTTGTCCAATTACATGTCGAAGGATTTGCTTCTGTGCGCTAGGATTTGAGCCGGGTTTGCAGAATGGGAGAGTTAAGAATGAGTTTCTTGATGGGGTGCGTAAGGTGGAGGAGTTTCTCAACGATCCTTGGGGAATTAGGGTTAGAGATGGGAAGGGAGCGACGGTTCAGGTCTGGGTTCCGAAGGTTGCGCCGCCTCCCCCACCAGTGCAGCCTGTTGGGGTTGTTGGTGAGGCGTTTATTAGTGGAGCTGATGGGGTCGATGAAATGGCGGCGGCGATGTCGGCTCAGACGAAGCGTATTGCGCTTCAGCGTAAGGCTGCTGCTGCTATGATTGCTGCTGAGGACTATGCCAGGCGATTTGAATCTGGGAGTTTAGTGGATGCCTCCGGTAGTCTCGTGGGGGAAGAGCAGGGGCAGTCGAATGTGAATGTAATGTGTAGAATATGTTTTGTTGGTGAAAATGAATCTAGTGAGAGAACACGGAGGATGCTTTCGTGCAAAACTTGTGGCAAAAAGTACCATCGCAACTGCTTGAAATCCTGGGCTCAACATAGGGGTAAGGTGTGGTCACGAGTTTATTTTTAG AGGAGGGAGAGAGAGAGAGGGAGGGAGAGATCCCTAACGCACAATCAAAAATTCAAAATCTCTAAATCTCTCGCAAATATGGCATTTCACGTAGCTTGTCCAATTACATGTCGAAGGATTTGCTTCTGTGCGCTAGGATTTGAGCCGGGTTTGCAGAATGGGAGAGTTAAGAATGAGTTTCTTGATGGGGTGCGTAAGGTGGAGGAGTTTCTCAACGATCCTTGGGGAATTAGGGTTAGAGATGGGAAGGGAGCGACGGTTCAGGTCTGGGTTCCGAAGGTTGCGCCGCCTCCCCCACCAGTGCAGCCTGTTGGGGTTGTTGGTGAGGCGTTTATTAGTGGAGCTGATGGGGTCGATGAAATGGCGGCGGCGATGTCGGCTCAGACGAAGCGTATTGCGCTTCAGCGTAAGGCTGCTGCTGCTATGATTGCTGCTGAGGACTATGCCAGGCGATTTGAATCTGGGAGTTTAGTGGATGCCTCCGGTAGTCTCGTGGGGGAAGAGCAGGGGCAGTCGAATGTGAATGTAATGTGTAGAATATGTTTTGTTGGTGAAAATGAATCTAGTGAGAGAACACGGAGGATGCTTTCGTGCAAAACTTGTGGCAAAAAGTACCATCGCAACTGCTTGAAATCCTGGGCTCAACATAGGGGTAAGGTGTGGTCACGAGTTTATTTTTAG RRERERGRERSLTHNQKFKISKSLANMAFHVACPITCRRICFCALGFEPGLQNGRVKNEFLDGVRKVEEFLNDPWGIRVRDGKGATVQVWVPKVAPPPPPVQPVGVVGEAFISGADGVDEMAAAMSAQTKRIALQRKAAAAMIAAEDYARRFESGSLVDASGSLVGEEQGQSNVNVMCRICFVGENESSERTRRMLSCKTCGKKYHRNCLKSWAQHRGKVWSRVYF
BLAST of Carg18666 vs. NCBI nr
Match: XP_022953975.1 (uncharacterized protein LOC111456373 [Cucurbita moschata]) HSP 1 Score: 382.1 bits (980), Expect = 1.3e-102 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg18666 vs. NCBI nr
Match: XP_022991851.1 (uncharacterized protein LOC111488373 [Cucurbita maxima]) HSP 1 Score: 374.8 bits (961), Expect = 2.1e-100 Identity = 188/191 (98.43%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Carg18666 vs. NCBI nr
Match: XP_023549386.1 (uncharacterized protein LOC111807748 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 352.4 bits (903), Expect = 1.1e-93 Identity = 186/217 (85.71%), Postives = 191/217 (88.02%), Query Frame = 0
BLAST of Carg18666 vs. NCBI nr
Match: XP_011659442.1 (PREDICTED: uncharacterized protein LOC101208296 [Cucumis sativus] >KGN45118.1 hypothetical protein Csa_7G427080 [Cucumis sativus]) HSP 1 Score: 343.6 bits (880), Expect = 5.2e-91 Identity = 172/191 (90.05%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Carg18666 vs. NCBI nr
Match: XP_008461311.2 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized protein LOC103499937 [Cucumis melo]) HSP 1 Score: 342.0 bits (876), Expect = 1.5e-90 Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Carg18666 vs. TAIR10
Match: AT3G08020.1 (PHD finger family protein) HSP 1 Score: 212.6 bits (540), Expect = 2.5e-55 Identity = 115/191 (60.21%), Postives = 133/191 (69.63%), Query Frame = 0
BLAST of Carg18666 vs. TAIR10
Match: AT3G52100.1 (RING/FYVE/PHD-type zinc finger family protein) HSP 1 Score: 133.7 bits (335), Expect = 1.5e-31 Identity = 84/210 (40.00%), Postives = 111/210 (52.86%), Query Frame = 0
BLAST of Carg18666 vs. TrEMBL
Match: tr|A0A0A0K6J3|A0A0A0K6J3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G427080 PE=4 SV=1) HSP 1 Score: 343.6 bits (880), Expect = 3.4e-91 Identity = 172/191 (90.05%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Carg18666 vs. TrEMBL
Match: tr|A0A1S3CEV4|A0A1S3CEV4_CUCME (LOW QUALITY PROTEIN: uncharacterized protein LOC103499937 OS=Cucumis melo OX=3656 GN=LOC103499937 PE=4 SV=1) HSP 1 Score: 342.0 bits (876), Expect = 9.9e-91 Identity = 171/191 (89.53%), Postives = 178/191 (93.19%), Query Frame = 0
BLAST of Carg18666 vs. TrEMBL
Match: tr|A0A067LG12|A0A067LG12_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_16777 PE=4 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 1.4e-55 Identity = 124/200 (62.00%), Postives = 142/200 (71.00%), Query Frame = 0
BLAST of Carg18666 vs. TrEMBL
Match: tr|A0A1J3H090|A0A1J3H090_NOCCA (Histone-lysine N-methyltransferase 2B OS=Noccaea caerulescens OX=107243 GN=LE_TR1569_c0_g1_i1_g.4226 PE=4 SV=1) HSP 1 Score: 223.0 bits (567), Expect = 6.7e-55 Identity = 119/191 (62.30%), Postives = 134/191 (70.16%), Query Frame = 0
BLAST of Carg18666 vs. TrEMBL
Match: tr|A0A1J3FSJ8|A0A1J3FSJ8_NOCCA (Histone-lysine N-methyltransferase 2B OS=Noccaea caerulescens OX=107243 GN=LC_TR11263_c1_g1_i1_g.39625 PE=4 SV=1) HSP 1 Score: 222.2 bits (565), Expect = 1.1e-54 Identity = 119/191 (62.30%), Postives = 134/191 (70.16%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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