Carg03430 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATTATTCGTTCCTCCTCGAAGCTTCGCATATCACGAGGTACTCGTCCTGCTATCTGCCGCGGGAGCCATTTCTCCTTCCTTCTTCTCCGTTTCTGTTACTCTGATCGCGAGCTCCATCCGATTTCATCGTTTGATTTGGGGTTTTGTACGGTAGTATTTGATTCAAATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGTGCGTAATTATCCCACTATTTTTATTTGGGGGTTTTTGTACTGGTGTGATGATTCCTGAAGAACAATTGTTATTGCTGTTGATTTGATTTCGAATTCGAAGCGGTTCGCGTTTTTACCGGGATCGGATTTGCATTTCGTTAATTGAAACTGATATGTCTAGATATGCTTTCAAATAATCGAATCGATCACTGATTCTAGGATTATAATCCTTCGCTTGTAGTGTGATTTTTCCCCTTCGTGTATTTGATTTCTATTCCGTATTGAATTGGAGTTTGATTCCTTATAATCTTATTGTTCCATTCTAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCACAAGCACACTGGAGCCCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGGTATGCACTTACTACTTCTTCCTTATCACACTGTTTGTTCTCTGATCATGTTGATGAAGAATTCAGCTGTAGACATTACTGTTTGATGCTGCTTATTATGTTATAGTATTCATATTTGATCTCGTTAATTGAATCATGCCCTGACGAACAAGTTGTATCAGGGTTCGTTTTTTTTTTTGTATTGCTGCAAGATACCAATGTGATTCTGGGTTTTTGTTGATCTTATTCATTAATCTTCAACTTGATTTTATACAATTGTGCTTGCGGCCATCAGTAATGGATCTTTTTTATGCTTAAGGAAAGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGTTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCAATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGGTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCCGATGAAAAAAGGGGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCCGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGAACTGAATATACATTATACAATCAAATGCCTTGCTGTCTTGATAG ATTATTCGTTCCTCCTCGAAGCTTCGCATATCACGAGGTACTCGTCCTGCTATCTGCCGCGGGAGCCATTTCTCCTTCCTTCTTCTCCGTTTCTGTTACTCTGATCGCGAGCTCCATCCGATTTCATCGTTTGATTTGGGGTTTTGTACGGTAGTATTTGATTCAAATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCACAAGCACACTGGAGCCCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGTTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCAATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGGTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCCGATGAAAAAAGGGGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCCGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGAACTGAATATACATTATACAATCAAATGCCTTGCTGTCTTGATAG ATGTCTGCGGCTACTGCACCGTTGAACAAAATTGAGCGAGCCCACCAGATGTACCGTGAGGGGCTCTATGTCGATGCCCTTAGATTTTACACTGAAGCGCTTGCCATGGCCAAGACCAAGTCCCAGAGGATTGCGCTGCATAGTAACAGAGCTGCTTGTCACTTGAAACTTCATGATTTTAAGAAGGCAGCAGAAGAATGTACGTGGGTTCTTGAACTTGATCACAAGCACACTGGAGCCCTAATGCTCCGTGCCCAGACTCTTGTCACACTCAAGGAATACCATTCTGCTCTGTTTGATGTCAACAGACTTATAGAACTGAACCCATCATCAGAAGTTTATCAAAATCTTCAAACTCGTCTCAAGACGCAATTGTCACTTGCTCCAATACCTGAATCAGAAGCAGAGTTTGAAGAAGAGGAGGAAGAAGAATATGATGTTGAGTTCAATGACTATGCAGCCAATGAGAAGTGCAATGAGGGAAAAGGAAATGTTATAGCTCCAAGTATTGTTCAGGTACAGAAACCTGAGCACGATTGCAATTTGATAAAAACTACCCTTATCCAGACAACTCGGGGCGACAGTGGATTATCCGATGAAAAAAGGGGCAATCAGAAAGCTGAGGTGAAAAACACCACAAAAAGTGAAGTTGTTGTCCTTCAAGCTCAGAGCAAGAAGGGCACGACCGACGTAGGTCCCAATGGCTGGCAAACGATCCCAAAACCAAAAGGACACTCGACTTTAGACTATGCACGTTGGGATAGAGTTGAGGATGATTCCAGTGAAGACGACGACGATGATGAAGAGGAGTCCGGACCTCAATTTCGTTTTCGTGTCAGAACCGTTGGCGTTAAACCTGTGAAATGA MSAATAPLNKIERAHQMYREGLYVDALRFYTEALAMAKTKSQRIALHSNRAACHLKLHDFKKAAEECTWVLELDHKHTGALMLRAQTLVTLKEYHSALFDVNRLIELNPSSEVYQNLQTRLKTQLSLAPIPESEAEFEEEEEEEYDVEFNDYAANEKCNEGKGNVIAPSIVQVQKPEHDCNLIKTTLIQTTRGDSGLSDEKRGNQKAEVKNTTKSEVVVLQAQSKKGTTDVGPNGWQTIPKPKGHSTLDYARWDRVEDDSSEDDDDDEEESGPQFRFRVRTVGVKPVK
BLAST of Carg03430 vs. NCBI nr
Match: XP_022943622.1 (tetratricopeptide repeat protein 12-like [Cucurbita moschata]) HSP 1 Score: 490.3 bits (1261), Expect = 4.3e-135 Identity = 287/288 (99.65%), Postives = 287/288 (99.65%), Query Frame = 0
BLAST of Carg03430 vs. NCBI nr
Match: XP_022986013.1 (tetratricopeptide repeat protein 12-like [Cucurbita maxima]) HSP 1 Score: 486.9 bits (1252), Expect = 4.8e-134 Identity = 286/288 (99.31%), Postives = 287/288 (99.65%), Query Frame = 0
BLAST of Carg03430 vs. NCBI nr
Match: XP_023511845.1 (protein unc-45 homolog B-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 485.0 bits (1247), Expect = 1.8e-133 Identity = 285/288 (98.96%), Postives = 287/288 (99.65%), Query Frame = 0
BLAST of Carg03430 vs. NCBI nr
Match: XP_008456309.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP5 [Cucumis melo]) HSP 1 Score: 404.8 bits (1039), Expect = 2.4e-109 Identity = 246/290 (84.83%), Postives = 259/290 (89.31%), Query Frame = 0
BLAST of Carg03430 vs. NCBI nr
Match: XP_004150040.1 (PREDICTED: peptidyl-prolyl cis-trans isomerase FKBP5 [Cucumis sativus] >KGN46807.1 hypothetical protein Csa_6G137600 [Cucumis sativus]) HSP 1 Score: 397.5 bits (1020), Expect = 3.8e-107 Identity = 245/290 (84.48%), Postives = 258/290 (88.97%), Query Frame = 0
BLAST of Carg03430 vs. TAIR10
Match: AT1G56090.1 (Tetratricopeptide repeat (TPR)-like superfamily protein) HSP 1 Score: 217.6 bits (553), Expect = 9.9e-57 Identity = 147/292 (50.34%), Postives = 171/292 (58.56%), Query Frame = 0
BLAST of Carg03430 vs. TAIR10
Match: AT3G25230.2 (rotamase FKBP 1) HSP 1 Score: 60.5 bits (145), Expect = 2.0e-09 Identity = 33/80 (41.25%), Postives = 50/80 (62.50%), Query Frame = 0
BLAST of Carg03430 vs. TAIR10
Match: AT3G54010.1 (FKBP-type peptidyl-prolyl cis-trans isomerase family protein) HSP 1 Score: 44.7 bits (104), Expect = 1.1e-04 Identity = 26/69 (37.68%), Postives = 36/69 (52.17%), Query Frame = 0
BLAST of Carg03430 vs. TAIR10
Match: AT1G53300.1 (tetratricopetide-repeat thioredoxin-like 1) HSP 1 Score: 43.5 bits (101), Expect = 2.5e-04 Identity = 28/83 (33.73%), Postives = 46/83 (55.42%), Query Frame = 0
BLAST of Carg03430 vs. Swiss-Prot
Match: sp|Q99KD5|UN45A_MOUSE (Protein unc-45 homolog A OS=Mus musculus OX=10090 GN=Unc45a PE=1 SV=2) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Carg03430 vs. Swiss-Prot
Match: sp|Q32PZ3|UN45A_RAT (Protein unc-45 homolog A OS=Rattus norvegicus OX=10116 GN=Unc45a PE=2 SV=1) HSP 1 Score: 75.5 bits (184), Expect = 1.1e-12 Identity = 39/104 (37.50%), Postives = 59/104 (56.73%), Query Frame = 0
BLAST of Carg03430 vs. Swiss-Prot
Match: sp|Q9H3U1|UN45A_HUMAN (Protein unc-45 homolog A OS=Homo sapiens OX=9606 GN=UNC45A PE=1 SV=1) HSP 1 Score: 73.6 bits (179), Expect = 4.1e-12 Identity = 39/104 (37.50%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of Carg03430 vs. Swiss-Prot
Match: sp|Q5RAP0|UN45A_PONAB (Protein unc-45 homolog A OS=Pongo abelii OX=9601 GN=UNC45A PE=2 SV=1) HSP 1 Score: 71.2 bits (173), Expect = 2.1e-11 Identity = 38/104 (36.54%), Postives = 58/104 (55.77%), Query Frame = 0
BLAST of Carg03430 vs. Swiss-Prot
Match: sp|Q07617|SPAG1_HUMAN (Sperm-associated antigen 1 OS=Homo sapiens OX=9606 GN=SPAG1 PE=1 SV=3) HSP 1 Score: 61.6 bits (148), Expect = 1.6e-08 Identity = 36/99 (36.36%), Postives = 56/99 (56.57%), Query Frame = 0
BLAST of Carg03430 vs. TrEMBL
Match: tr|A0A1S3C3M0|A0A1S3C3M0_CUCME (peptidyl-prolyl cis-trans isomerase FKBP5 OS=Cucumis melo OX=3656 GN=LOC103496296 PE=4 SV=1) HSP 1 Score: 404.8 bits (1039), Expect = 1.6e-109 Identity = 246/290 (84.83%), Postives = 259/290 (89.31%), Query Frame = 0
BLAST of Carg03430 vs. TrEMBL
Match: tr|A0A0A0KEG5|A0A0A0KEG5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G137600 PE=4 SV=1) HSP 1 Score: 397.5 bits (1020), Expect = 2.5e-107 Identity = 245/290 (84.48%), Postives = 258/290 (88.97%), Query Frame = 0
BLAST of Carg03430 vs. TrEMBL
Match: tr|A0A2G9GGV0|A0A2G9GGV0_9LAMI (Uncharacterized protein OS=Handroanthus impetiginosus OX=429701 GN=CDL12_22941 PE=4 SV=1) HSP 1 Score: 263.5 bits (672), Expect = 5.7e-67 Identity = 172/292 (58.90%), Postives = 195/292 (66.78%), Query Frame = 0
BLAST of Carg03430 vs. TrEMBL
Match: tr|A0A067F2L6|A0A067F2L6_CITSI (Uncharacterized protein OS=Citrus sinensis OX=2711 GN=CISIN_1g023491mg PE=4 SV=1) HSP 1 Score: 260.4 bits (664), Expect = 4.8e-66 Identity = 193/289 (66.78%), Postives = 216/289 (74.74%), Query Frame = 0
BLAST of Carg03430 vs. TrEMBL
Match: tr|A0A2I4FZM5|A0A2I4FZM5_9ROSI (protein unc-45 homolog A-like OS=Juglans regia OX=51240 GN=LOC109003440 PE=4 SV=1) HSP 1 Score: 258.5 bits (659), Expect = 1.8e-65 Identity = 176/285 (61.75%), Postives = 202/285 (70.88%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |