Carg19350 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTTAAAACCTCGAAGCTCTTACTTGTTTTGCAAACCAACTGAGAATAAGAAGAAATGGGTGTTTTGGATCATTTGTCTGACTATTTTGATTGTTCTTCCCACAGCTCTAAGCACAAGAAACGCAAGCAATTGCAGGTAAATTTTGAGGTTTTTTGTGTTCTAGATCTTTATTTTGGTTTGATTTTGTGTTTTTTTCTGTTTTTATGCTAAACCCAGATGCTTGTTAGCTTGAAAATGGGGTTTTTTTTGCTTATTTTCTAGCTGTTTTTAGTGAAAGTTTTGAACTTGAACTAAACCCAGTTGAGTTCTCCAAAAACCCATAAAATTAAGCACAAATTTGCTTGGTGGAGTGAAGAAAAAGTAGGAAGATTTGGGCTTTGAACGTACTAGTAGACGTTAGATCTCACATCGGTTGGAGAAGTAAATGAATTATTCTTTATAAAGTTGTGGAAACTTCAATCTAGTAAAAACCCGTTTTAAAAATATTGAGGGGAAGCCCAAAATGAAGAGGTATGTGCTCGCGGTGAGTTCGAACGGTTACGGTGAAATTCTTTATAAAGGTGTGGAAACTTCTAATTAATACACGTATTTCAAAAATTTTGAGTTAGTGGTGGACATGGACTCTTACTGTAGCTGAATGACTTGAGGAAAAACCCGAACGGAAAAGTCATGTGCTAGTGGTGGATTTAGATTGTTACGGGGTGACATTCTTTACAAGAGGGTGAAAATTCTAATGAGTATACGCGTTTTAAAAATTATAAGAGAAAGCCTCAAAAGGGTAAATCAATTGCTAGCGGTGGACTTAGACTGTTATAGTAGTAGATGCGTATGAAAAACTATGAGAGGATGTCGGAGCGAGAAAGTCATCTTTTAGTAGTGGGCTTGAACTATTATTATGTTCACTCTCTCGAGCTGAAATACATGTCAATTACGGTCAAATTAGCGGGAATTCTAATAATATTTGGATGTTGAAATTGTTAGACGGTGGAGCTAAAGATTCGGATCGACTGCGAAGGGTGTGAGAGGAAGGTAAGGAGAGCATTGGAAGGGATGAAGGGAGTGAAGCAGGTGGACGTGGACCGCAAGGCCAACAAAGCCACCGTTGTCGGATACGTCGAGCCATCGAAAGTGGTGGCGCGTGTCGCTCATCGGACTGGTAAGAAGGCGGAGCTATGGCCCTACGTGCCCTACGACGTCGTGGCACATCCTTACGCGCCGGGAGTGTATGACAAGAAGGCGCCGGCAGGGTACGTGCGGAAAGCTGACGATCCCAACGTGTACCAGCTGGCACGTGCGAGCTCCACAGAGGTTCGCTATACGACAGCGTTTAGTGACGAAAATCCCGCGGCTTGCGCTGTCATGTAA TTTAAAACCTCGAAGCTCTTACTTGTTTTGCAAACCAACTGAGAATAAGAAGAAATGGGTGTTTTGGATCATTTGTCTGACTATTTTGATTGTTCTTCCCACAGCTCTAAGCACAAGAAACGCAAGCAATTGCAGACGGTGGAGCTAAAGATTCGGATCGACTGCGAAGGGTGTGAGAGGAAGGTAAGGAGAGCATTGGAAGGGATGAAGGGAGTGAAGCAGGTGGACGTGGACCGCAAGGCCAACAAAGCCACCGTTGTCGGATACGTCGAGCCATCGAAAGTGGTGGCGCGTGTCGCTCATCGGACTGGTAAGAAGGCGGAGCTATGGCCCTACGTGCCCTACGACGTCGTGGCACATCCTTACGCGCCGGGAGTGTATGACAAGAAGGCGCCGGCAGGGTACGTGCGGAAAGCTGACGATCCCAACGTGTACCAGCTGGCACGTGCGAGCTCCACAGAGGTTCGCTATACGACAGCGTTTAGTGACGAAAATCCCGCGGCTTGCGCTGTCATGTAA ATGGGTGTTTTGGATCATTTGTCTGACTATTTTGATTGTTCTTCCCACAGCTCTAAGCACAAGAAACGCAAGCAATTGCAGACGGTGGAGCTAAAGATTCGGATCGACTGCGAAGGGTGTGAGAGGAAGGTAAGGAGAGCATTGGAAGGGATGAAGGGAGTGAAGCAGGTGGACGTGGACCGCAAGGCCAACAAAGCCACCGTTGTCGGATACGTCGAGCCATCGAAAGTGGTGGCGCGTGTCGCTCATCGGACTGGTAAGAAGGCGGAGCTATGGCCCTACGTGCCCTACGACGTCGTGGCACATCCTTACGCGCCGGGAGTGTATGACAAGAAGGCGCCGGCAGGGTACGTGCGGAAAGCTGACGATCCCAACGTGTACCAGCTGGCACGTGCGAGCTCCACAGAGGTTCGCTATACGACAGCGTTTAGTGACGAAAATCCCGCGGCTTGCGCTGTCATGTAA MGVLDHLSDYFDCSSHSSKHKKRKQLQTVELKIRIDCEGCERKVRRALEGMKGVKQVDVDRKANKATVVGYVEPSKVVARVAHRTGKKAELWPYVPYDVVAHPYAPGVYDKKAPAGYVRKADDPNVYQLARASSTEVRYTTAFSDENPAACAVM
BLAST of Carg19350 vs. NCBI nr
Match: XP_022952479.1 (heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] >XP_022969515.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita maxima] >XP_023553686.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 312.8 bits (800), Expect = 6.6e-82 Identity = 154/154 (100.00%), Postives = 154/154 (100.00%), Query Frame = 0
BLAST of Carg19350 vs. NCBI nr
Match: XP_008447957.1 (PREDICTED: heavy metal-associated isoprenylated plant protein 26-like [Cucumis melo]) HSP 1 Score: 307.4 bits (786), Expect = 2.8e-80 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg19350 vs. NCBI nr
Match: XP_022928351.1 (heavy metal-associated isoprenylated plant protein 26-like [Cucurbita moschata] >XP_023529807.1 heavy metal-associated isoprenylated plant protein 26-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 303.9 bits (777), Expect = 3.1e-79 Identity = 148/154 (96.10%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Carg19350 vs. NCBI nr
Match: XP_022136102.1 (heavy metal-associated isoprenylated plant protein 26-like [Momordica charantia]) HSP 1 Score: 301.6 bits (771), Expect = 1.5e-78 Identity = 147/154 (95.45%), Postives = 151/154 (98.05%), Query Frame = 0
BLAST of Carg19350 vs. NCBI nr
Match: XP_022989067.1 (heavy metal-associated isoprenylated plant protein 26 [Cucurbita maxima] >XP_022989068.1 heavy metal-associated isoprenylated plant protein 26 [Cucurbita maxima]) HSP 1 Score: 300.8 bits (769), Expect = 2.6e-78 Identity = 146/154 (94.81%), Postives = 150/154 (97.40%), Query Frame = 0
BLAST of Carg19350 vs. TAIR10
Match: AT4G38580.1 (farnesylated protein 6) HSP 1 Score: 251.5 bits (641), Expect = 3.3e-67 Identity = 121/154 (78.57%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of Carg19350 vs. TAIR10
Match: AT4G35060.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 225.3 bits (573), Expect = 2.5e-59 Identity = 110/155 (70.97%), Postives = 132/155 (85.16%), Query Frame = 0
BLAST of Carg19350 vs. TAIR10
Match: AT5G66110.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 197.2 bits (500), Expect = 7.4e-51 Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 0
BLAST of Carg19350 vs. TAIR10
Match: AT1G71050.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 174.5 bits (441), Expect = 5.1e-44 Identity = 89/155 (57.42%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of Carg19350 vs. TAIR10
Match: AT1G22990.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 163.7 bits (413), Expect = 9.0e-41 Identity = 82/156 (52.56%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of Carg19350 vs. Swiss-Prot
Match: sp|Q9SZN7|HIP26_ARATH (Heavy metal-associated isoprenylated plant protein 26 OS=Arabidopsis thaliana OX=3702 GN=HIPP26 PE=1 SV=1) HSP 1 Score: 251.5 bits (641), Expect = 5.9e-66 Identity = 121/154 (78.57%), Postives = 138/154 (89.61%), Query Frame = 0
BLAST of Carg19350 vs. Swiss-Prot
Match: sp|O49613|HIP25_ARATH (Heavy metal-associated isoprenylated plant protein 25 OS=Arabidopsis thaliana OX=3702 GN=HIPP25 PE=2 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 4.6e-58 Identity = 110/155 (70.97%), Postives = 132/155 (85.16%), Query Frame = 0
BLAST of Carg19350 vs. Swiss-Prot
Match: sp|Q67ZW1|HIP27_ARATH (Heavy metal-associated isoprenylated plant protein 27 OS=Arabidopsis thaliana OX=3702 GN=HIPP27 PE=1 SV=1) HSP 1 Score: 197.2 bits (500), Expect = 1.3e-49 Identity = 96/136 (70.59%), Postives = 113/136 (83.09%), Query Frame = 0
BLAST of Carg19350 vs. Swiss-Prot
Match: sp|Q9C9A3|HIP20_ARATH (Heavy metal-associated isoprenylated plant protein 20 OS=Arabidopsis thaliana OX=3702 GN=HIPP20 PE=1 SV=1) HSP 1 Score: 174.5 bits (441), Expect = 9.2e-43 Identity = 89/155 (57.42%), Postives = 114/155 (73.55%), Query Frame = 0
BLAST of Carg19350 vs. Swiss-Prot
Match: sp|Q93VP2|HIP22_ARATH (Heavy metal-associated isoprenylated plant protein 22 OS=Arabidopsis thaliana OX=3702 GN=HIPP22 PE=1 SV=1) HSP 1 Score: 163.7 bits (413), Expect = 1.6e-39 Identity = 82/156 (52.56%), Postives = 110/156 (70.51%), Query Frame = 0
BLAST of Carg19350 vs. TrEMBL
Match: tr|A0A1S3BIL5|A0A1S3BIL5_CUCME (heavy metal-associated isoprenylated plant protein 26-like OS=Cucumis melo OX=3656 GN=LOC103490286 PE=4 SV=1) HSP 1 Score: 307.4 bits (786), Expect = 1.8e-80 Identity = 150/154 (97.40%), Postives = 152/154 (98.70%), Query Frame = 0
BLAST of Carg19350 vs. TrEMBL
Match: tr|B9H1A3|B9H1A3_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_004G175400v3 PE=4 SV=1) HSP 1 Score: 280.0 bits (715), Expect = 3.2e-72 Identity = 136/154 (88.31%), Postives = 146/154 (94.81%), Query Frame = 0
BLAST of Carg19350 vs. TrEMBL
Match: tr|B9T850|B9T850_RICCO (Metal ion binding protein, putative OS=Ricinus communis OX=3988 GN=RCOM_0083440 PE=4 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.6e-71 Identity = 132/154 (85.71%), Postives = 144/154 (93.51%), Query Frame = 0
BLAST of Carg19350 vs. TrEMBL
Match: tr|A9PI31|A9PI31_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 PE=2 SV=1) HSP 1 Score: 276.2 bits (705), Expect = 4.6e-71 Identity = 134/154 (87.01%), Postives = 142/154 (92.21%), Query Frame = 0
BLAST of Carg19350 vs. TrEMBL
Match: tr|A0A2P2J9R8|A0A2P2J9R8_RHIMU (Uncharacterized protein MANES_04G076000 OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 273.9 bits (699), Expect = 2.3e-70 Identity = 134/154 (87.01%), Postives = 143/154 (92.86%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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