Carg10490-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10490-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	sorting nexin 1
Location	Cucurbita_argyrosperma_scaffold_098 : 443397 .. 448492 (-)
Sequence length	1176

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCAGGTTCATTGCTTAGCCCTAGATCTCCGTCTTCGCAGCCTTATCTGTCAGTTTCGGTGACTGATCCTGTGAAATTGGGCAATGGGGTACAAGCTTATATCTCATACCGAGTTATTACAAAGGTATTTGTGCATTTATTATGTTTTTCAATGGTCTTCGAACCTTTTGTTTGATTTTTCGTTCATTTATCATTTCATACGTGATGACATTTTTGAACTGCCATCAGCCTGCTGGCAGTTTTTATGTTCAATTGACTGCCAACTAGGTAACATTATGTGAATTTTGTTTGCGATGTGAAGTGAAGAATGCTGATTGTGTACCTAACTAAGAAACTGGAAGAGATCGATTCATTTGCATTCAGCTGTAGTTTTACTCGGTATTTGGAAGGCAATAATGTGAAATAAAAAAAAAGGAATGCAGATTGGATATCAAATGTTACCATCGAATATAATGTGCAATTTCCGGCTTCAAAGCCGATGGATGATGTGAGAGATGATTGAGGCTGACTATTTAAAGAAAATGAACAGGGATGTTCTTTTGTGGGAAATTGCATAGGCCGGATAGGAAGTTCTAAGGAGGAGTTGACGTAAATAAGAAAAAGCTCTCTACATGGTGGAAAATAGATGAATGAATGGTTGTATGGGACGAGGTGCAATGGCTGAAGGTTTTCTGAGTTTTTAAAGAGTTCTAAATTTAGGCAGCGTTGGCTGAAGGTTCTACTAAAACTACGAAAACTCTTGGAGGGAGCTCTTGTAATTTCCTCATTATTTTGCGAGAATGGTAATCAATGAGTTTGCTGAGCTTTTTTATTTATTCTATGCTTATTTTCCTATTATAATCCATGAAAACAGAGCACATTTGCTGTCATAATGCTTCAAGGAGCATGAAATTGTCTTGCTGAATAATGAAGAAGAAGGATTGGCCAAAAATTGAAAAGTGAAAATCATATCTTAAAGAGACAAATTTTGTTTCTCAACATGAAATCCTTACTTCAAAAGATGATTTTTGATTGGCACCTCTAAAACAACTGATATTTTGGAATACGTTTCCTGAGTATTACATATTTAAAAGACAATATATTAAAAAAATCATCAAGGATTTCGGGTTCAGGGGGGAAAATATCAGCTGTGTATACTAGGTAACTTTCAATGGGTAACAAAATACATAGTCGACGTAACGTCATTTTCACATGAGAATCCTTTCTGTTTGTGCTCTTTTCCAGAGATGATTTTATCAAGTATATATTTGCCTTTTATTTTATGTTTAGTATGTATAATGATTGACCAGCATATCATTTGTTATAATTTGTACTGGCAGACTAATTTTCCTGAATATCAAGGTCCAGAGAAGATTGTCATTCGGCGATACAGTGATTTTGTTTGGTTACATGATCGGCTTTTTGAGAAGTATAAAGGCATTTTTATTCCTTCTATTCCAGAGAAAAATGCTGTAGGTAAGAAGATTATGAGTTTCCTTTGCCGTTATATGTTTCATTATTTTGAGGTTGGATTATGTCACTAAATAATAGTACTTATGTTTCCCTTTCCATTGCTAATACCAAGGGTTCTAATATTCTTTCAAACTATCGAGTTTTCATCAGTATTAAGGTGTACTAAATAATAGTACTTATGTTGTTCGGTGTTTTATCTAATTAAAACTGAACCTGCGAATAATTATAATGTTTAACAGTATTAAGGTGTTGAGATATACAAACATATGTTCCAGAATATGTTTGAGCAACGTGTTCAACTATCAACTACCATTCTGTTGAATGGGTGTACATATGATTACTTCTTTTTGCTGAATTAGTGTTTGTTGGTATGATATATAATCCATGAATTTGATATTGAAGGTTGATTTTTTCTATATATACTTGTACACAGAGAAATATAAGATCTAGAATTGCCATTGATAGTTTAATACTTTGTTTATATCGTGAGGTCATCCAAAGTAATGAAAAAGATGCGCCAGATTTGATGCTGTTATACATTTAATATTTATGTTTAGAATAAGTCATAAGTTCAGTTTTTGTGCTGCAGAGAAATTTCGTTTTAGTGCTGAATTTATTGAAATGAGGCGTCAAGCTTTGGATATATTTGTAAATCAGATAGCTTCACATCACGAGCTTCAAAAGAGTGAGGATTTGAGAACCTTCTTGCAGGTGGAAGAAGAGGTGATGTTCAAGGACTTTTTATGCCGTACAGTACATCCTCTTTTTCTTTTCTCTGCCCACCATACTATGTTGTACTGTCCATCCTCTTATGTAAGAAGATCCATCAAGTTGATACATGTGTTATCTTATGAGCAGACCATGGAGAGGTTGAGGTCTCATGATTCCGGAATTTTCAAGAAAAAGCCAGCTGATTTAATGCAAATGTTCAAGGTAAGAAAGTGTTGGGGTGGAGGAATGATACACAATTCCTAATTTGATTGTTAGTGCGTGTGTAATTTAACGAAAAATAAATTTTATTTCATTTCTGAAGGCAAGTACTGCCAGACTCCAGAGATACGAACAATTTTATATCTATCAAAAAGGTTAATATAGCAGCGATGTGAACAATTTTAAATGTCCTGTCGATGCAGGAAGAAAAGTGGAGATTGCTTAAAAGCTCCCTCATAGAGGAGACGCAAAATGGAAAAATTTTCAATTTCTGCCTGTCTTTAGAAAAATGGAGATTGTTCAAAAAAATTTGAACATCTGCCTTTGTCTTTTTCTCTTATTTTGAAAATTTCTGCCTCTGTTTCTTTTTCTCTTATTTTTTTCATCTAAACATCTCTCTCTCTCTCTCTTGTTCTTTTTGTTTAGGCGGATCAATGTTTTATGTTCTGGTGGGTCACTTTTTTGAAAAAGAATTCTTGGACACTTTTTTACTTTCTGAGTTAGGTTATTAGTGCTACTAGATGCAAGTTCTGGTTTCACTCAGATGATAAGATGATAAGTGAAAGATTCAATATAAACAGTATTCCTGTGCTCTTTCTGTAGAAGATGTTGTTGCTGGCTTTTTTCAGACCTCCAAGCCTATGTGGTTTGATCCTGCTGGTTTTGTGGAATATGTATTCTAGGCTGCCTCTGGTCATCTCTTTAATAACAAAAATGACGTTGTTTGCATGTTCTAGTTTCTCCTTGAGAGCAGTCATGATAGTGTTCTTTTTAAATTTTGTCAAGAGGAGTCTTCGCAATACATTGTCTGTCGTGAATACTGAATTAAACATTCAATTGGTATGATGTCTACTCTGCTAGTATTTTGTATTTTGTTAAGAGACATTTTTTTCAACTCCTTTGACTAGGTGGGAGGGTTTATTTTCCTCTCGTTTTTGCGATCCTCCTTTGACTCAATAACACTGTTCCCCCCCTCTGGTGGACGTACAGTCTAAAGTAAGTGACATTGTTCTTGGAAAAGAAAAACCAGTGGAAGAGTCAAATCCTGAATATGAAAAGCTAAAACACTACATCTTTGAGCTTGAAAACCACTTGACTGAAGCCCAGAAGCATGCATTTCGACTTGTGAAAAGGCATAGAGGTATACAAAAATCTTCAAGATCGTTTAGTTGTAGCTAAAATTTGTAATTTATGTTTTTGCTACCACTTTATTTCATTAGAAAGCAAATGAATAATGTCTGATTATTTCTGCTTGTGCGCTAGAGCTGGGACAAGCATTAGCAGATTTTGGAAAGGCTGCCAAGCTTCTTGGTGCTTGTGAAGAAAAAGCTGTTGGCAAGGGGTTCTCAGAACTGGGAGCCAAATCAGAGATGTTGTCAATTAAGTTGCAAAAAGAGGTATATTTAGGGTGTTTTTCCATAACTTCTTAACTGATTTATTTAAAAACATCTTTTTGAGAATTACTTGCAAGCTGTTTTCCCAAAAAACTGATTTTGAAGTGATTGACCCAGTATAAATTCACTTTATCGAAATTTGGATATTGGCAGAGAGGATTTTGTTGTGTTAATAGTACTTGTGTATTGATGTGAATCTACAGGCTCACGAACTTCTGTTGAATTTCGAGGAACCCTTGAAAGATTACGTTCGTGCGGTTCAATCTATTAAGGTAAATTCCCCCCCCCCCCCCCCCCTCTCCCCCTCTCCCCTTGAGTTGATTTTGAATGTCCTGACTACTACCAAATTTGTGGCATTATTTCCTGTTGTTCGTACAAATTGGGGTTCAAAATTTAGATTTCAAGTTTGTCACACTAGTATACTGTACCTGTTTAGTTGAACTTTTTTACTATAAGTATTGGTATATGTCCCATGATGTTGGTACAAGTTCGAGTTCAAAATTTGGATTTCTTTTTCATGCAGGGGCTGAAATGATTTGTCTTGGAGTATATCTTCTTTCTCACTGTCATCTTGGTCTATCTATTTGTGTTTGAATTAATTAACGTAAGTTCGTGTTTATTTGGTAACTGTCCTTGATAAGACTTGATTTCTTTGTTTGAAACAGGCCACCATAGCCGAGAGAGCCAACGCCTTCAGGCAGCAATGTGAACTTGCAGAAACAACAAAGCTGAAGGAGATAAATCTGTATGCTTCCAACATCTCATCTCCATTTATGTTGTCATAATAGCAGGATAGCTCACCGTCCTGTGAATTTACCTCTAAAATTCATTCTATGGAGTTCTATCTGCTTACCATACCAATTTTCATTATCTTTTACCCTTTCTTAAGAATCCGTTGTAGATTGTTCAGATCTTTGAACGTTCTTGTTATGAGAAACTTAGTTTATAAGTTCAATGGTTTTCAGAGACAGACTCGTGCTAATGAGATCAGACAAAGCGGCTGAGGCTGAGGTGGAGTACAAAGAGGTATATGAACTTCCATGAACATAATTTGTTCACTACTCAAAAAACAAAATGTATTCTAACTAGAAGTAGTTTGGTTGTACAGTTGAAGGCAGCAAGTGAGGAAGCGACAAAAAGATTTGAAACAATAGTGGCACTAATGAATCAAGAGATCATACGATTTCAGGAACAGAAAACATTAGACATGGGGCTTGCTTTCCATGAATTTGCAAAAGGACAGGCACATTTGGCAAATGGGGTTGCCGACGCATGGCGAAGTCTCCTTCCCAAGCTCGAGGCTCTCTCGGTTTCGTGA

mRNA sequence

ATGCCAGGTTCATTGCTTAGCCCTAGATCTCCGTCTTCGCAGCCTTATCTGTCAGTTTCGGTGACTGATCCTGTGAAATTGGGCAATGGGGTACAAGCTTATATCTCATACCGAGTTATTACAAAGACTAATTTTCCTGAATATCAAGGTCCAGAGAAGATTGTCATTCGGCGATACAGTGATTTTGTTTGGTTACATGATCGGCTTTTTGAGAAGTATAAAGGCATTTTTATTCCTTCTATTCCAGAGAAAAATGCTGTAGAGAAATTTCGTTTTAGTGCTGAATTTATTGAAATGAGGCGTCAAGCTTTGGATATATTTGTAAATCAGATAGCTTCACATCACGAGCTTCAAAAGAGTGAGGATTTGAGAACCTTCTTGCAGGTGGAAGAAGAGACCATGGAGAGGTTGAGGTCTCATGATTCCGGAATTTTCAAGAAAAAGCCAGCTGATTTAATGCAAATGTTCAAGTCTAAAGTAAGTGACATTGTTCTTGGAAAAGAAAAACCAGTGGAAGAGTCAAATCCTGAATATGAAAAGCTAAAACACTACATCTTTGAGCTTGAAAACCACTTGACTGAAGCCCAGAAGCATGCATTTCGACTTGTGAAAAGGCATAGAGAGCTGGGACAAGCATTAGCAGATTTTGGAAAGGCTGCCAAGCTTCTTGGTGCTTGTGAAGAAAAAGCTGTTGGCAAGGGGTTCTCAGAACTGGGAGCCAAATCAGAGATGTTGTCAATTAAGTTGCAAAAAGAGGCTCACGAACTTCTGTTGAATTTCGAGGAACCCTTGAAAGATTACGTTCGTGCGGTTCAATCTATTAAGGCCACCATAGCCGAGAGAGCCAACGCCTTCAGGCAGCAATGTGAACTTGCAGAAACAACAAAGCTGAAGGAGATAAATCTAGACAGACTCGTGCTAATGAGATCAGACAAAGCGGCTGAGGCTGAGGTGGAGTACAAAGAGTTGAAGGCAGCAAGTGAGGAAGCGACAAAAAGATTTGAAACAATAGTGGCACTAATGAATCAAGAGATCATACGATTTCAGGAACAGAAAACATTAGACATGGGGCTTGCTTTCCATGAATTTGCAAAAGGACAGGCACATTTGGCAAATGGGGTTGCCGACGCATGGCGAAGTCTCCTTCCCAAGCTCGAGGCTCTCTCGGTTTCGTGA

Coding sequence (CDS)

ATGCCAGGTTCATTGCTTAGCCCTAGATCTCCGTCTTCGCAGCCTTATCTGTCAGTTTCGGTGACTGATCCTGTGAAATTGGGCAATGGGGTACAAGCTTATATCTCATACCGAGTTATTACAAAGACTAATTTTCCTGAATATCAAGGTCCAGAGAAGATTGTCATTCGGCGATACAGTGATTTTGTTTGGTTACATGATCGGCTTTTTGAGAAGTATAAAGGCATTTTTATTCCTTCTATTCCAGAGAAAAATGCTGTAGAGAAATTTCGTTTTAGTGCTGAATTTATTGAAATGAGGCGTCAAGCTTTGGATATATTTGTAAATCAGATAGCTTCACATCACGAGCTTCAAAAGAGTGAGGATTTGAGAACCTTCTTGCAGGTGGAAGAAGAGACCATGGAGAGGTTGAGGTCTCATGATTCCGGAATTTTCAAGAAAAAGCCAGCTGATTTAATGCAAATGTTCAAGTCTAAAGTAAGTGACATTGTTCTTGGAAAAGAAAAACCAGTGGAAGAGTCAAATCCTGAATATGAAAAGCTAAAACACTACATCTTTGAGCTTGAAAACCACTTGACTGAAGCCCAGAAGCATGCATTTCGACTTGTGAAAAGGCATAGAGAGCTGGGACAAGCATTAGCAGATTTTGGAAAGGCTGCCAAGCTTCTTGGTGCTTGTGAAGAAAAAGCTGTTGGCAAGGGGTTCTCAGAACTGGGAGCCAAATCAGAGATGTTGTCAATTAAGTTGCAAAAAGAGGCTCACGAACTTCTGTTGAATTTCGAGGAACCCTTGAAAGATTACGTTCGTGCGGTTCAATCTATTAAGGCCACCATAGCCGAGAGAGCCAACGCCTTCAGGCAGCAATGTGAACTTGCAGAAACAACAAAGCTGAAGGAGATAAATCTAGACAGACTCGTGCTAATGAGATCAGACAAAGCGGCTGAGGCTGAGGTGGAGTACAAAGAGTTGAAGGCAGCAAGTGAGGAAGCGACAAAAAGATTTGAAACAATAGTGGCACTAATGAATCAAGAGATCATACGATTTCAGGAACAGAAAACATTAGACATGGGGCTTGCTTTCCATGAATTTGCAAAAGGACAGGCACATTTGGCAAATGGGGTTGCCGACGCATGGCGAAGTCTCCTTCCCAAGCTCGAGGCTCTCTCGGTTTCGTGA

Protein sequence

MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS

Homology

[Close]

BLAST of Carg10490-RA vs. NCBI nr
Match: XP_023544810.1 (sorting nexin 1-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 748.8 bits (1932), Expect = 9.2e-213
Identity = 390/391 (99.74%), Postives = 391/391 (100.00%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS
Sbjct: 7   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK 180
           EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK
Sbjct: 127 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK 186

Query: 181 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGA 240
           LKHYIFELENHLTEAQKHAFRLVKRHRELGQAL+DFGKAAKLLGACEEKAVGKGFSELGA
Sbjct: 187 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALSDFGKAAKLLGACEEKAVGKGFSELGA 246

Query: 241 KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI 300
           KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI
Sbjct: 247 KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI 306

Query: 301 NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF 360
           NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF
Sbjct: 307 NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF 366

Query: 361 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           HEFAKGQAHLANGVADAWRSLLPKLEALSVS
Sbjct: 367 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 397

[Close]

BLAST of Carg10490-RA vs. NCBI nr
Match: XP_022926163.1 (sorting nexin 1-like [Cucurbita moschata])

HSP 1 Score: 745.0 bits (1922), Expect = 1.3e-211
Identity = 389/391 (99.49%), Postives = 389/391 (99.49%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           MP SLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS
Sbjct: 7   MPVSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK 180
           EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK
Sbjct: 127 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK 186

Query: 181 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGA 240
           LKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGA
Sbjct: 187 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGA 246

Query: 241 KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI 300
           KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI
Sbjct: 247 KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI 306

Query: 301 NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF 360
           NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIV LMNQEIIRFQEQKTLDMGLAF
Sbjct: 307 NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVVLMNQEIIRFQEQKTLDMGLAF 366

Query: 361 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           HEFAKGQAHLANGVADAWRSLLPKLEALSVS
Sbjct: 367 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 397

[Close]

BLAST of Carg10490-RA vs. NCBI nr
Match: XP_022977913.1 (sorting nexin 1-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 736.1 bits (1899), Expect = 6.2e-209
Identity = 383/391 (97.95%), Postives = 388/391 (99.23%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           +P SLLSPRSPSSQP LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS
Sbjct: 7   IPSSLLSPRSPSSQPCLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIP IPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPFIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK 180
           EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQ+FKSKVSDIVLGKEKPVEESNPEYEK
Sbjct: 127 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQLFKSKVSDIVLGKEKPVEESNPEYEK 186

Query: 181 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELGA 240
           LKHYIFELENHLTEAQKHAFRLVKRHRELGQAL+DFGKAAKLLGACEEKAVGKGFSELGA
Sbjct: 187 LKHYIFELENHLTEAQKHAFRLVKRHRELGQALSDFGKAAKLLGACEEKAVGKGFSELGA 246

Query: 241 KSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEI 300
           KSEMLSIKLQKEAHELLLNFEEPLKDY+RAVQSIKATIAERANAFRQQCELAETTKLKEI
Sbjct: 247 KSEMLSIKLQKEAHELLLNFEEPLKDYIRAVQSIKATIAERANAFRQQCELAETTKLKEI 306

Query: 301 NLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF 360
           NLDRLVL+RSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF
Sbjct: 307 NLDRLVLVRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAF 366

Query: 361 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           HEFAKGQAHLANGVADAWRSLLPKLEALSVS
Sbjct: 367 HEFAKGQAHLANGVADAWRSLLPKLEALSVS 397

[Close]

BLAST of Carg10490-RA vs. NCBI nr
Match: XP_022977912.1 (sorting nexin 1-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 730.7 bits (1885), Expect = 2.6e-207
Identity = 383/394 (97.21%), Postives = 388/394 (98.48%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           +P SLLSPRSPSSQP LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS
Sbjct: 7   IPSSLLSPRSPSSQPCLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIP IPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPFIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPE 180
           EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQ+FK   SKVSDIVLGKEKPVEESNPE
Sbjct: 127 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQLFKGVQSKVSDIVLGKEKPVEESNPE 186

Query: 181 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSE 240
           YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQAL+DFGKAAKLLGACEEKAVGKGFSE
Sbjct: 187 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALSDFGKAAKLLGACEEKAVGKGFSE 246

Query: 241 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKL 300
           LGAKSEMLSIKLQKEAHELLLNFEEPLKDY+RAVQSIKATIAERANAFRQQCELAETTKL
Sbjct: 247 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYIRAVQSIKATIAERANAFRQQCELAETTKL 306

Query: 301 KEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 360
           KEINLDRLVL+RSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG
Sbjct: 307 KEINLDRLVLVRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 366

Query: 361 LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS
Sbjct: 367 LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS 400

[Close]

BLAST of Carg10490-RA vs. NCBI nr
Match: XP_008462589.1 (PREDICTED: sorting nexin 1 [Cucumis melo])

HSP 1 Score: 718.0 bits (1852), Expect = 1.7e-203
Identity = 372/394 (94.42%), Postives = 385/394 (97.72%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           +PGS LSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY+
Sbjct: 7   LPGSSLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYN 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIPS+PEKNAVEKFRFSAEFIEMRRQALDIFVN+IASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPSLPEKNAVEKFRFSAEFIEMRRQALDIFVNRIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPE 180
           EDLRTFLQ EEETMERLRSHDSGIFKKKPADLMQMFK   SKVSDIVLGKEKPVEESNPE
Sbjct: 127 EDLRTFLQAEEETMERLRSHDSGIFKKKPADLMQMFKDVQSKVSDIVLGKEKPVEESNPE 186

Query: 181 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSE 240
           YEKLKHYIFELENHLTEAQKHA+RLVKRHRELGQAL+DFGKAAKLLGACEE AVGKGFSE
Sbjct: 187 YEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQALSDFGKAAKLLGACEENAVGKGFSE 246

Query: 241 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKL 300
           +GAKSEMLSIKLQKEAH+LL+NFEEPLKDYVR VQSIKATIAERANAFRQQCELAETT+L
Sbjct: 247 MGAKSEMLSIKLQKEAHQLLMNFEEPLKDYVRTVQSIKATIAERANAFRQQCELAETTRL 306

Query: 301 KEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 360
           KEINLD+L+LMRSDKA+EAEVEYKELKAASEEATKRFETIVALMNQE IRFQEQKTLDMG
Sbjct: 307 KEINLDKLMLMRSDKASEAEVEYKELKAASEEATKRFETIVALMNQETIRFQEQKTLDMG 366

Query: 361 LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           LAFHEFAKGQA LANGVADAWRSLLPKLEALSVS
Sbjct: 367 LAFHEFAKGQARLANGVADAWRSLLPKLEALSVS 400

[Close]

BLAST of Carg10490-RA vs. TAIR10
Match: AT5G06140.1 (sorting nexin 1)

HSP 1 Score: 602.1 bits (1551), Expect = 2.5e-172
Identity = 312/388 (80.41%), Postives = 344/388 (88.66%), Query Frame = 0


Query: 3   GSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDF 62
           GS+ SPRSPSS PYLSVSVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRYSDF
Sbjct: 12  GSMQSPRSPSSHPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDF 71

Query: 63  VWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSED 122
           VWL DRLFEKYKGIFIP +PEK+AVEKFRFSAEFIEMRR ALDIFVN+IA H ELQ+SED
Sbjct: 72  VWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRIALHPELQQSED 131

Query: 123 LRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPEYE 182
           LRTFLQ +EETM+R R  ++ IF KKPADLMQMF+   SKVSD VLGKEKPVEE+  +YE
Sbjct: 132 LRTFLQADEETMDRFRFQETSIF-KKPADLMQMFRDVQSKVSDAVLGKEKPVEETTADYE 191

Query: 183 KLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELG 242
           KLKHYIFELENHLTEAQKHA+RLVKRHRELGQ+L DFGKA KLLGACE +  GK FS+LG
Sbjct: 192 KLKHYIFELENHLTEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGEPTGKAFSDLG 251

Query: 243 AKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKE 302
            KSE+LSIKLQKEA ++L+NFEEPLKDYVR VQSIKATIAER  AF+Q CEL+ETTKLKE
Sbjct: 252 TKSELLSIKLQKEAQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHCELSETTKLKE 311

Query: 303 INLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLA 362
           INLD+L+L RSDK  EAE+EY+E+KA SEEAT+RFE IV  M  EI+RFQEQKT +MG+A
Sbjct: 312 INLDKLMLTRSDKVGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQEQKTEEMGVA 371

Query: 363 FHEFAKGQAHLANGVADAWRSLLPKLEA 388
           FH+FAKGQA LAN VADAWRSLLPKLEA
Sbjct: 372 FHQFAKGQARLANSVADAWRSLLPKLEA 398

[Close]

BLAST of Carg10490-RA vs. TAIR10
Match: AT5G07120.1 (sorting nexin 2B)

HSP 1 Score: 110.9 bits (276), Expect = 1.8e-24
Identity = 110/427 (25.76%), Postives = 190/427 (44.50%), Query Frame = 0


Query: 9   RSPS--SQPYLSVSVTDPVK-------LGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY 68
           RSPS  S  Y+ ++V++P K       +  G   YI+Y++ T+TN  +Y G E  V RR+
Sbjct: 132 RSPSSLSSDYIKITVSNPQKEQEATNSMIPGGSTYITYQITTRTNLSDYGGSEFSVRRRF 191

Query: 69  SDFVWLHDRLFEKYKGIFIPSIPEKNAVE-KFRFSAEFIEMRRQALDIFVNQIASHHELQ 128
            D V L DRL E Y+G  IP  P+K+ VE +     EF+E RR AL+ ++ ++ +H  ++
Sbjct: 192 RDIVTLADRLAESYRGFCIPPRPDKSIVESQVMQKQEFVEQRRVALEKYLRRLVAHPVIR 251

Query: 129 KSEDLRTFLQVE------EETMERLRSHDSGIFKKKP--------------------ADL 188
            S++L+ FLQ +        T    R  D  +   K                      D 
Sbjct: 252 NSDELKVFLQAQGKLPLATSTDVASRMLDGAVKLPKQLFGEGGGASSVEVVQPGRGGRDF 311

Query: 189 MQMFK---SKVSDIVLGKEKPVEESNPEYEKLKHYIFELENHLTEAQKHAFRLVKRHREL 248
           ++MFK     VS+   G + PV E + E+ + K  +++LE  +  A + A  LVK  +++
Sbjct: 312 LRMFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMYDLEQQIINASQQAESLVKAQQDM 371

Query: 249 GQALADFGKAAKLLGACE--------EKAVGKGFSELGAKSEMLSIKLQKEAHELLLNFE 308
           G+ + + G A   L   E        ++A       L A S + + +  +E +   +   
Sbjct: 372 GETMGELGLAFIKLTKFENEEAVFNSQRARANDMKNL-ATSAVKASRFYRELNSQTVKHL 431

Query: 309 EPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKEINLDRLVLMRS-----DKAAEA 368
           + L DY+  + +++   A+R++A      L       E   ++L +  S     DK+   
Sbjct: 432 DTLHDYLGLMMAVQGAFADRSSALLTVQTLLSELSSLEARAEKLEVASSKVFGGDKSRIK 491

Query: 369 EV-EYKELKAASEE----ATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFAKGQAHLA 379
           ++ E KE    +E+    A + +E I      E+ R   ++  D       F   Q   A
Sbjct: 492 KIEELKETIKVTEDSKNVAIREYEQIKENNWSEVERLDRERRADFLNMMKGFVANQVGYA 551

[Close]

BLAST of Carg10490-RA vs. TAIR10
Match: AT5G58440.1 (sorting nexin 2A)

HSP 1 Score: 109.4 bits (272), Expect = 5.1e-24
Identity = 109/431 (25.29%), Postives = 197/431 (45.71%), Query Frame = 0


Query: 4   SLLSPRSPSSQPYLSVSVTDPVK---LGN---GVQAYISYRVITKTNFPEYQGPEKI-VI 63
           SL    S SS  Y+ ++V++P K   + N   G   YI+Y++ T+TN P++ GP +  V 
Sbjct: 140 SLSRSPSSSSSDYIKITVSNPQKEQEISNSIVGGNTYITYQITTRTNLPDFGGPSEFSVR 199

Query: 64  RRYSDFVWLHDRLFEKYKGIFIPSIPEKNAVE-KFRFSAEFIEMRRQALDIFVNQIASHH 123
           RR+ D V L DRL E Y+G  IP  P+K+ VE +     EF+E RR AL+ ++ ++++H 
Sbjct: 200 RRFRDVVTLADRLAETYRGFCIPPRPDKSVVESQVMQKQEFVEQRRVALEKYLRRLSAHP 259

Query: 124 ELQKSEDLRTFLQVEEE------TMERLRSHDSGIFKKK------------------PA- 183
            ++ S++L+ FLQV+ +      T    R  D  +   K                  PA 
Sbjct: 260 VIRNSDELKVFLQVQGKLPLPMSTDVASRMLDGAVKLPKQLFGEGGASAVPVTEVGQPAR 319

Query: 184 ---DLMQMFK---SKVSDIVLGKEKPVEESNPEYEKLKHYIFELENHLTEAQKHAFRLVK 243
              DL+++FK     VS+   G + PV E + E+ + K  + +LE  +  A + A  LVK
Sbjct: 320 GGRDLLRLFKELRQSVSNDWGGSKPPVVEEDKEFLEKKEKMHDLEQQIINASQQAESLVK 379

Query: 244 RHRELGQALADFGKAAKLL-------GACEEKAVGKGFSELGAKSEMLSIKLQKEAHELL 303
             +++G+ + + G A   L         C  +       +  A + + + +  +E +   
Sbjct: 380 AQQDMGETMGELGLAFIKLTKFENEEAVCNPQRTRANDMKNLATAAVKASRFYRELNSQT 439

Query: 304 LNFEEPLKDYVRAVQSIKATIAERANA-FRQQCELAE----TTKLKEINLDRLVLMRSDK 363
           +   + L +Y+  + +++   A+R++A    Q  L+E     T+++++      +   DK
Sbjct: 440 VKHLDTLHEYLGMMMAVQGAFADRSSALLTVQTLLSELPSLQTRVEKLEAASSKVFGGDK 499

Query: 364 AAEAEVE-----YKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFAKGQ 379
           +   ++E      K  + A   A K +E I      E+ R   ++  D       F   Q
Sbjct: 500 SRIRKIEELKETIKVTEDAKNVAIKGYERIKENNRSEVERLDRERRADFMNMMKGFVVNQ 559

[Close]

BLAST of Carg10490-RA vs. TAIR10
Match: AT3G15920.1 (Phox (PX) domain-containing protein)

HSP 1 Score: 43.5 bits (101), Expect = 3.5e-04
Identity = 39/180 (21.67%), Postives = 85/180 (47.22%), Query Frame = 0


Query: 20  SVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKYKGIFIP 79
           SV+DP          + YRV      PE     ++V+RR++DF+ L+  + +++    +P
Sbjct: 121 SVSDPA---------VFYRVQVAIQSPEGITSARLVLRRFNDFLELYSSIKKEFVKKSLP 180

Query: 80  SIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTFLQVEEETMERLRS 139
             P K  +     +   +E RR +L+ ++N++ S  ++ +S  + TFL++E      +RS
Sbjct: 181 QAPPKKILR--MRNQTLLEERRCSLEDWMNRLLSDIDISRSALIATFLELE----AAVRS 240

Query: 140 HDSGIFKK---KPADLMQMFKSKVSDIVLGKEKPVEESNPEYEK------LKHYIFELEN 191
           + +  +++      D+  +  + +SD+       ++  N   ++      +KH    L+N
Sbjct: 241 YFNDEYQETEDTSGDIPSLLPTTISDVPGSSSVTIDHDNDSADETSNASTMKHDEANLKN 285

[Close]

BLAST of Carg10490-RA vs. Swiss-Prot
Match: sp|Q9FG38|SNX1_ARATH (Sorting nexin 1 OS=Arabidopsis thaliana OX=3702 GN=SNX1 PE=1 SV=1)

HSP 1 Score: 602.1 bits (1551), Expect = 4.5e-171
Identity = 312/388 (80.41%), Postives = 344/388 (88.66%), Query Frame = 0


Query: 3   GSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDF 62
           GS+ SPRSPSS PYLSVSVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRYSDF
Sbjct: 12  GSMQSPRSPSSHPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDF 71

Query: 63  VWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSED 122
           VWL DRLFEKYKGIFIP +PEK+AVEKFRFSAEFIEMRR ALDIFVN+IA H ELQ+SED
Sbjct: 72  VWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRAALDIFVNRIALHPELQQSED 131

Query: 123 LRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPEYE 182
           LRTFLQ +EETM+R R  ++ IF KKPADLMQMF+   SKVSD VLGKEKPVEE+  +YE
Sbjct: 132 LRTFLQADEETMDRFRFQETSIF-KKPADLMQMFRDVQSKVSDAVLGKEKPVEETTADYE 191

Query: 183 KLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELG 242
           KLKHYIFELENHLTEAQKHA+RLVKRHRELGQ+L DFGKA KLLGACE +  GK FS+LG
Sbjct: 192 KLKHYIFELENHLTEAQKHAYRLVKRHRELGQSLLDFGKAVKLLGACEGEPTGKAFSDLG 251

Query: 243 AKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKE 302
            KSE+LSIKLQKEA ++L+NFEEPLKDYVR VQSIKATIAER  AF+Q CEL+ETTKLKE
Sbjct: 252 TKSELLSIKLQKEAQQVLMNFEEPLKDYVRYVQSIKATIAERGTAFKQHCELSETTKLKE 311

Query: 303 INLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLA 362
           INLD+L+L RSDK  EAE+EY+E+KA SEEAT+RFE IV  M  EI+RFQEQKT +MG+A
Sbjct: 312 INLDKLMLTRSDKVGEAEIEYREIKAESEEATRRFERIVKRMEDEIVRFQEQKTEEMGVA 371

Query: 363 FHEFAKGQAHLANGVADAWRSLLPKLEA 388
           FH+FAKGQA LAN VADAWRSLLPKLEA
Sbjct: 372 FHQFAKGQARLANSVADAWRSLLPKLEA 398

[Close]

BLAST of Carg10490-RA vs. Swiss-Prot
Match: sp|Q05B62|SNX1_BOVIN (Sorting nexin-1 OS=Bos taurus OX=9913 GN=SNX1 PE=2 SV=1)

HSP 1 Score: 146.4 bits (368), Expect = 6.8e-34
Identity = 111/386 (28.76%), Postives = 199/386 (51.55%), Query Frame = 0


Query: 17  LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKY--K 76
           L+V +TDP K+G+G+ AY++Y+V T+T+ P ++     V RR+SDF+ L+++L EK+   
Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPMFRSKHFAVKRRFSDFLGLYEKLSEKHSQN 204

Query: 77  GIFIPSIPEKNAV--------EKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTF 136
           G  +P  PEK+ +        ++   SAEF+E RR AL+ ++ +I +H  + +  D+R F
Sbjct: 205 GFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREF 264

Query: 137 LQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEKLKHYIF 196
           L+ EE           G      A L++MF +K +D V      + ES+  +E+    + 
Sbjct: 265 LEKEE------LPRAVGTQTLSGAGLLKMF-NKATDAVSKMTINMNESDIWFEEKLQEVE 324

Query: 197 ELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEK-AVGKGFSELGAKSEML 256
             E  L +       LV   +EL    A F K+  +LG+ E+  A+ +  S+L    E +
Sbjct: 325 CEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKI 384

Query: 257 SIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETT--KLKEINLD 316
               Q++A+       E L DY+R +  ++A   +R   + Q+ + A+TT  K +E    
Sbjct: 385 EQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTW-QRWQDAQTTLQKKREAEAR 444

Query: 317 RLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEF 376
            L   + DK  +A+ E  E ++   +  + FE I  ++ +E+IRF+++K+ D      ++
Sbjct: 445 LLWANKPDKLQQAKDEIVEWESRVTQYERDFERISTVVRKEVIRFEKEKSRDFRNHVIQY 504

Query: 377 AKGQAHLANGVADAWRSLLPKLEALS 390
            +   H    +A  W + LP+ +A+S
Sbjct: 505 LETLLHSQQQLAKYWEAFLPEAKAIS 522

[Close]

BLAST of Carg10490-RA vs. Swiss-Prot
Match: sp|Q13596|SNX1_HUMAN (Sorting nexin-1 OS=Homo sapiens OX=9606 GN=SNX1 PE=1 SV=3)

HSP 1 Score: 143.7 bits (361), Expect = 4.4e-33
Identity = 109/385 (28.31%), Postives = 196/385 (50.91%), Query Frame = 0


Query: 17  LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKY--K 76
           L+V +TDP K+G+G+ AY++Y+V T+T+ P ++  +  V RR+SDF+ L+++L EK+   
Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQN 204

Query: 77  GIFIPSIPEKNAV--------EKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTF 136
           G  +P  PEK+ +        ++   SAEF+E RR AL+ ++ +I +H  + +  D+R F
Sbjct: 205 GFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREF 264

Query: 137 LQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEKLKHYIF 196
           L+ EE           G      A L++MF +K +D V      + ES+  +E+    + 
Sbjct: 265 LEKEE------LPRAVGTQTLSGAGLLKMF-NKATDAVSKMTIKMNESDIWFEEKLQEVE 324

Query: 197 ELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEK-AVGKGFSELGAKSEML 256
             E  L +       LV   +EL    A F K+  +LG+ E+  A+ +  S+L    E +
Sbjct: 325 CEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKI 384

Query: 257 SIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETTKLKEINLDR 316
               Q++A+       E L DY+R +  ++A   +R   + R Q   A   K +E     
Sbjct: 385 EQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARL 444

Query: 317 LVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFA 376
           L   + DK  +A+ E  E ++   +  + FE I  ++ +E+IRF+++K+ D      ++ 
Sbjct: 445 LWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYL 504

Query: 377 KGQAHLANGVADAWRSLLPKLEALS 390
           +   +    +A  W + LP+ +A+S
Sbjct: 505 ETLLYSQQQLAKYWEAFLPEAKAIS 522

[Close]

BLAST of Carg10490-RA vs. Swiss-Prot
Match: sp|Q5RFP8|SNX1_PONAB (Sorting nexin-1 OS=Pongo abelii OX=9601 GN=SNX1 PE=2 SV=1)

HSP 1 Score: 142.9 bits (359), Expect = 7.6e-33
Identity = 109/385 (28.31%), Postives = 195/385 (50.65%), Query Frame = 0


Query: 17  LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKY--K 76
           L+V +TDP K+G+G+ AY++Y+V T+T+ P ++  +  V RR+SDF+ L+++L EK+   
Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQN 204

Query: 77  GIFIPSIPEKNAV--------EKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTF 136
           G  +P  PEK+ +        ++   SAEF+E RR AL+ ++ +I +H  + +  D+R F
Sbjct: 205 GFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYIQRIVNHPTMLQDPDVREF 264

Query: 137 LQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEKLKHYIF 196
           L+ EE           G      A L +MF +K +D V      + ES+  +E+    + 
Sbjct: 265 LEKEE------LPRAVGTQTLSGAGLPKMF-NKATDAVSKMTIKMNESDIWFEEKLQEVE 324

Query: 197 ELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEK-AVGKGFSELGAKSEML 256
             E  L +       LV   +EL    A F K+  +LG+ E+  A+ +  S+L    E +
Sbjct: 325 CEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKI 384

Query: 257 SIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETTKLKEINLDR 316
               Q++A+       E L DY+R +  ++A   +R   + R Q   A   K +E     
Sbjct: 385 EQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARL 444

Query: 317 LVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFA 376
           L   + DK  +A+ E  E ++   +  + FE I  ++ +E+IRF+++K+ D      ++ 
Sbjct: 445 LWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVIRFEKEKSKDFKNHVIKYL 504

Query: 377 KGQAHLANGVADAWRSLLPKLEALS 390
           +   +    +A  W + LP+ +A+S
Sbjct: 505 ETLLYSQQQLAKYWEAFLPEAKAIS 522

[Close]

BLAST of Carg10490-RA vs. Swiss-Prot
Match: sp|Q4R503|SNX1_MACFA (Sorting nexin-1 OS=Macaca fascicularis OX=9541 GN=SNX1 PE=2 SV=1)

HSP 1 Score: 142.5 bits (358), Expect = 9.9e-33
Identity = 108/385 (28.05%), Postives = 196/385 (50.91%), Query Frame = 0


Query: 17  LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDFVWLHDRLFEKY--K 76
           L+V +TDP K+G+G+ AY++Y+V T+T+ P ++  +  V RR+SDF+ L+++L EK+   
Sbjct: 145 LTVGITDPEKIGDGMNAYVAYKVTTQTSLPLFRSKQFAVKRRFSDFLGLYEKLSEKHSQN 204

Query: 77  GIFIPSIPEKNAV--------EKFRFSAEFIEMRRQALDIFVNQIASHHELQKSEDLRTF 136
           G  +P  PEK+ +        ++   SAEF+E RR AL+ ++ +I +H  + +  D+R F
Sbjct: 205 GFIVPPPPEKSLIGMTKVKVGKEDSSSAEFLEKRRAALERYLQRIVNHPTMLQDPDVREF 264

Query: 137 LQVEEETMERLRSHDSGIFKKKPADLMQMFKSKVSDIVLGKEKPVEESNPEYEKLKHYIF 196
           L+ EE           G      A L++MF +K +D V      + ES+  +E+    + 
Sbjct: 265 LEKEE------LPRAVGTQTLSGAGLLKMF-NKATDAVSKMTIKMNESDIWFEEKLQEVE 324

Query: 197 ELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEK-AVGKGFSELGAKSEML 256
             E  L +       LV   +EL    A F K+  +LG+ E+  A+ +  S+L    E +
Sbjct: 325 CEEQRLRKLHAVVETLVNHRKELALNTAQFAKSLAMLGSSEDNTALSRALSQLAEVEEKI 384

Query: 257 SIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAF-RQQCELAETTKLKEINLDR 316
               Q++A+       E L DY+R +  ++A   +R   + R Q   A   K +E     
Sbjct: 385 EQLHQEQANNDFFLLAELLSDYIRLLAIVRAAFDQRMKTWQRWQDAQATLQKKREAEARL 444

Query: 317 LVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLAFHEFA 376
           L   + DK  +A+ E  E ++   +  + FE I  ++ +E++RF+++K+ D      ++ 
Sbjct: 445 LWANKPDKLQQAKDEILEWESRVTQYERDFERISTVVRKEVMRFEKEKSKDFKNHVIKYL 504

Query: 377 KGQAHLANGVADAWRSLLPKLEALS 390
           +   +    +A  W + LP+ +A+S
Sbjct: 505 ETLLYSQQQLAKYWEAFLPEAKAIS 522

[Close]

BLAST of Carg10490-RA vs. TrEMBL
Match: tr|A0A1S3CH95|A0A1S3CH95_CUCME (sorting nexin 1 OS=Cucumis melo OX=3656 GN=LOC103500911 PE=4 SV=1)

HSP 1 Score: 718.0 bits (1852), Expect = 1.2e-203
Identity = 372/394 (94.42%), Postives = 385/394 (97.72%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           +PGS LSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY+
Sbjct: 7   LPGSSLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYN 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIPS+PEKNAVEKFRFSAEFIEMRRQALDIFVN+IASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPSLPEKNAVEKFRFSAEFIEMRRQALDIFVNRIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPE 180
           EDLRTFLQ EEETMERLRSHDSGIFKKKPADLMQMFK   SKVSDIVLGKEKPVEESNPE
Sbjct: 127 EDLRTFLQAEEETMERLRSHDSGIFKKKPADLMQMFKDVQSKVSDIVLGKEKPVEESNPE 186

Query: 181 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSE 240
           YEKLKHYIFELENHLTEAQKHA+RLVKRHRELGQAL+DFGKAAKLLGACEE AVGKGFSE
Sbjct: 187 YEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQALSDFGKAAKLLGACEENAVGKGFSE 246

Query: 241 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKL 300
           +GAKSEMLSIKLQKEAH+LL+NFEEPLKDYVR VQSIKATIAERANAFRQQCELAETT+L
Sbjct: 247 MGAKSEMLSIKLQKEAHQLLMNFEEPLKDYVRTVQSIKATIAERANAFRQQCELAETTRL 306

Query: 301 KEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 360
           KEINLD+L+LMRSDKA+EAEVEYKELKAASEEATKRFETIVALMNQE IRFQEQKTLDMG
Sbjct: 307 KEINLDKLMLMRSDKASEAEVEYKELKAASEEATKRFETIVALMNQETIRFQEQKTLDMG 366

Query: 361 LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           LAFHEFAKGQA LANGVADAWRSLLPKLEALSVS
Sbjct: 367 LAFHEFAKGQARLANGVADAWRSLLPKLEALSVS 400

[Close]

BLAST of Carg10490-RA vs. TrEMBL
Match: tr|A0A0A0KHI2|A0A0A0KHI2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452750 PE=4 SV=1)

HSP 1 Score: 714.1 bits (1842), Expect = 1.7e-202
Identity = 368/394 (93.40%), Postives = 385/394 (97.72%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           +PGS LSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRY+
Sbjct: 7   LPGSSLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYN 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DFVWLHDRLFEKYKGIFIPS+PEKNAVEKFRFSAEFIEMRRQALDIFVN+IASHHELQKS
Sbjct: 67  DFVWLHDRLFEKYKGIFIPSLPEKNAVEKFRFSAEFIEMRRQALDIFVNRIASHHELQKS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPE 180
           EDLRTFLQ EEETMERLRSHDSGIFKKKPADLMQ+FK   SKVSDIVLGKEKPVEESNPE
Sbjct: 127 EDLRTFLQAEEETMERLRSHDSGIFKKKPADLMQIFKDVQSKVSDIVLGKEKPVEESNPE 186

Query: 181 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSE 240
           YEKLKHYIFELENHLTEAQKHA+RLVKRHRELGQAL+DFGKAAKLLGACEE AVGKGFSE
Sbjct: 187 YEKLKHYIFELENHLTEAQKHAYRLVKRHRELGQALSDFGKAAKLLGACEENAVGKGFSE 246

Query: 241 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKL 300
           +GAKSEMLS+KLQKEAH+LL+NFEEPLKDYVR VQSIKATIAERANAFRQQCELAETT+L
Sbjct: 247 MGAKSEMLSVKLQKEAHQLLMNFEEPLKDYVRTVQSIKATIAERANAFRQQCELAETTRL 306

Query: 301 KEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 360
           KEINLD+L+LMRSDKA+EAEVEYKELKAASEEATKRFETIVALMNQE +RFQEQKTLD+G
Sbjct: 307 KEINLDKLMLMRSDKASEAEVEYKELKAASEEATKRFETIVALMNQETVRFQEQKTLDVG 366

Query: 361 LAFHEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           LAFHEFAKGQA LANGVADAWRSLLPKLEALSVS
Sbjct: 367 LAFHEFAKGQARLANGVADAWRSLLPKLEALSVS 400

[Close]

BLAST of Carg10490-RA vs. TrEMBL
Match: tr|A0A2P6RC75|A0A2P6RC75_ROSCH (Putative vacuolar protein sorting-associated protein 17, Vps17 OS=Rosa chinensis OX=74649 GN=RchiOBHm_Chr3g0474681 PE=4 SV=1)

HSP 1 Score: 656.0 bits (1691), Expect = 5.4e-185
Identity = 338/391 (86.45%), Postives = 366/391 (93.61%), Query Frame = 0


Query: 3   GSLLSPRSP-SSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSD 62
           GS  SPRSP +SQP+LSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSD
Sbjct: 10  GSSQSPRSPAASQPFLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSD 69

Query: 63  FVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSE 122
           FVWL DRLFEKYKGIFIP IPEK+AVEKFRFSAEFIEMRRQALD+FVN+IASHHELQ+SE
Sbjct: 70  FVWLRDRLFEKYKGIFIPPIPEKSAVEKFRFSAEFIEMRRQALDVFVNRIASHHELQQSE 129

Query: 123 DLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPEY 182
           DLRTFLQ +EETMERLR H++GIFKKKP+DLMQ+FK   SKVSD+VLGKEKPVEESNPEY
Sbjct: 130 DLRTFLQADEETMERLRFHETGIFKKKPSDLMQIFKDVQSKVSDVVLGKEKPVEESNPEY 189

Query: 183 EKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSEL 242
           EKLKHYIFELENHL EAQKHA+RLVKRHRELGQ+L+DFGKAAKLLGACE  A+GK FSEL
Sbjct: 190 EKLKHYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAAKLLGACEGNALGKAFSEL 249

Query: 243 GAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLK 302
           GAKSE LS KLQKEAH+LL+NFEEPLKDYVRAVQSIKATIAERANAFRQQCELAET KLK
Sbjct: 250 GAKSEALSFKLQKEAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETMKLK 309

Query: 303 EINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGL 362
           EINLD+L+L RSDK  EAE+EYKELKA SEEAT+RFETIV LMN+EI+RFQEQKT+DMG+
Sbjct: 310 EINLDKLMLTRSDKVGEAELEYKELKADSEEATRRFETIVRLMNEEIVRFQEQKTIDMGV 369

Query: 363 AFHEFAKGQAHLANGVADAWRSLLPKLEALS 390
           AFHEFAKGQA LAN +ADAWRSLLPKLE+ S
Sbjct: 370 AFHEFAKGQARLANSIADAWRSLLPKLESCS 400

[Close]

BLAST of Carg10490-RA vs. TrEMBL
Match: tr|A0A0D2QAJ1|A0A0D2QAJ1_GOSRA (Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G153000 PE=4 SV=1)

HSP 1 Score: 652.9 bits (1683), Expect = 4.5e-184
Identity = 336/392 (85.71%), Postives = 365/392 (93.11%), Query Frame = 0


Query: 1   MPGSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 60
           + GS  SPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS
Sbjct: 7   LSGSSQSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYS 66

Query: 61  DFVWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKS 120
           DF+WL DRLFEKYKGIFIP +PEK+AVEKFRFSAEFIEMRRQALDIFVN+IASH+ LQ+S
Sbjct: 67  DFIWLRDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRQALDIFVNRIASHNLLQQS 126

Query: 121 EDLRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPE 180
           EDLRTFLQ +EETMERLRSH++GIFKKKPADLMQMFK   SKVSD+VLGKEKPVEESNPE
Sbjct: 127 EDLRTFLQADEETMERLRSHETGIFKKKPADLMQMFKDVQSKVSDVVLGKEKPVEESNPE 186

Query: 181 YEKLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSE 240
           YEKLK Y+FELENHL EAQKHA+RLVKRHRELGQ+L+DFGKAAKLLGACE + +GK FS+
Sbjct: 187 YEKLKQYVFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAAKLLGACEGQVLGKAFSD 246

Query: 241 LGAKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKL 300
           LGAKSE+LS KLQKEAH+LL++FEEPLKDYVRAVQSIKATI ERANAFRQQCELAET KL
Sbjct: 247 LGAKSEVLSAKLQKEAHQLLMSFEEPLKDYVRAVQSIKATIGERANAFRQQCELAETMKL 306

Query: 301 KEINLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMG 360
           KEINLD+L+L RSD+  EAE EYKELKAASEEAT+RFETIV LMN+EI+RFQEQKT DMG
Sbjct: 307 KEINLDKLMLTRSDRVGEAEHEYKELKAASEEATRRFETIVQLMNEEIVRFQEQKTQDMG 366

Query: 361 LAFHEFAKGQAHLANGVADAWRSLLPKLEALS 390
           +AFHEFAKGQA LAN VADAWRSLLPKLEA S
Sbjct: 367 IAFHEFAKGQARLANSVADAWRSLLPKLEACS 398

[Close]

BLAST of Carg10490-RA vs. TrEMBL
Match: tr|A0A2I4GZE2|A0A2I4GZE2_9ROSI (sorting nexin 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109012189 PE=4 SV=1)

HSP 1 Score: 652.5 bits (1682), Expect = 5.9e-184
Identity = 333/392 (84.95%), Postives = 362/392 (92.35%), Query Frame = 0


Query: 3   GSLLSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNFPEYQGPEKIVIRRYSDF 62
           GS  SPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTN PEYQGPEKIVIRRYSDF
Sbjct: 9   GSSQSPRSPSSQPYLSVSVTDPVKLGNGVQAYISYRVITKTNLPEYQGPEKIVIRRYSDF 68

Query: 63  VWLHDRLFEKYKGIFIPSIPEKNAVEKFRFSAEFIEMRRQALDIFVNQIASHHELQKSED 122
           VWLHDRLFEKYKGIFIP +PEK+AVEKFRFSAEFIEMRRQALDIFVN+IA HHELQ+SED
Sbjct: 69  VWLHDRLFEKYKGIFIPPLPEKSAVEKFRFSAEFIEMRRQALDIFVNRIALHHELQQSED 128

Query: 123 LRTFLQVEEETMERLRSHDSGIFKKKPADLMQMFK---SKVSDIVLGKEKPVEESNPEYE 182
           LRTFLQ +EETMERLRS ++GIFKKKP D MQ+FK   SKVSD+VLGKEKPVEESNPEYE
Sbjct: 129 LRTFLQADEETMERLRSQETGIFKKKPTDFMQIFKDVQSKVSDVVLGKEKPVEESNPEYE 188

Query: 183 KLKHYIFELENHLTEAQKHAFRLVKRHRELGQALADFGKAAKLLGACEEKAVGKGFSELG 242
           KLKHYIFELENHL EAQKHA+RLVKRHRELGQ+L+DFGKA KLLGACE  ++GK FSELG
Sbjct: 189 KLKHYIFELENHLAEAQKHAYRLVKRHRELGQSLSDFGKAVKLLGACEGNSLGKAFSELG 248

Query: 243 AKSEMLSIKLQKEAHELLLNFEEPLKDYVRAVQSIKATIAERANAFRQQCELAETTKLKE 302
            KSE LS+KLQKEAH+LL+NFEEPLKDYVRAVQSIKATIAERANAFR+QCELAETTKLKE
Sbjct: 249 TKSETLSVKLQKEAHQLLMNFEEPLKDYVRAVQSIKATIAERANAFRRQCELAETTKLKE 308

Query: 303 INLDRLVLMRSDKAAEAEVEYKELKAASEEATKRFETIVALMNQEIIRFQEQKTLDMGLA 362
           INL++L LMRSDK  EAE+EY+ELK  SEEAT+ FE IV LMN+EI+RFQEQKTLDMG+A
Sbjct: 309 INLNKLTLMRSDKVGEAEIEYQELKVESEEATRMFEMIVRLMNEEIVRFQEQKTLDMGIA 368

Query: 363 FHEFAKGQAHLANGVADAWRSLLPKLEALSVS 392
           FHEFAKGQA LANG+A+AWRSL+PKLEA S S
Sbjct: 369 FHEFAKGQARLANGIANAWRSLIPKLEACSSS 400

The following BLAST results are available for this feature:

BLAST of Carg10490-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_023544810.1	9.2e-213	99.74	sorting nexin 1-like [Cucurbita pepo subsp. pepo]	[more]
XP_022926163.1	1.3e-211	99.49	sorting nexin 1-like [Cucurbita moschata]	[more]
XP_022977913.1	6.2e-209	97.95	sorting nexin 1-like isoform X2 [Cucurbita maxima]	[more]
XP_022977912.1	2.6e-207	97.21	sorting nexin 1-like isoform X1 [Cucurbita maxima]	[more]
XP_008462589.1	1.7e-203	94.42	PREDICTED: sorting nexin 1 [Cucumis melo]	[more]

BLAST of Carg10490-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT5G06140.1	2.5e-172	80.41	sorting nexin 1	[more]
AT5G07120.1	1.8e-24	25.76	sorting nexin 2B	[more]
AT5G58440.1	5.1e-24	25.29	sorting nexin 2A	[more]
AT3G15920.1	3.5e-04	21.67	Phox (PX) domain-containing protein	[more]

BLAST of Carg10490-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9FG38\|SNX1_ARATH	4.5e-171	80.41	Sorting nexin 1 OS=Arabidopsis thaliana OX=3702 GN=SNX1 PE=1 SV=1	[more]
sp\|Q05B62\|SNX1_BOVIN	6.8e-34	28.76	Sorting nexin-1 OS=Bos taurus OX=9913 GN=SNX1 PE=2 SV=1	[more]
sp\|Q13596\|SNX1_HUMAN	4.4e-33	28.31	Sorting nexin-1 OS=Homo sapiens OX=9606 GN=SNX1 PE=1 SV=3	[more]
sp\|Q5RFP8\|SNX1_PONAB	7.6e-33	28.31	Sorting nexin-1 OS=Pongo abelii OX=9601 GN=SNX1 PE=2 SV=1	[more]
sp\|Q4R503\|SNX1_MACFA	9.9e-33	28.05	Sorting nexin-1 OS=Macaca fascicularis OX=9541 GN=SNX1 PE=2 SV=1	[more]

BLAST of Carg10490-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CH95\|A0A1S3CH95_CUCME	1.2e-203	94.42	sorting nexin 1 OS=Cucumis melo OX=3656 GN=LOC103500911 PE=4 SV=1	[more]
tr\|A0A0A0KHI2\|A0A0A0KHI2_CUCSA	1.7e-202	93.40	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452750 PE=4 SV=1	[more]
tr\|A0A2P6RC75\|A0A2P6RC75_ROSCH	5.4e-185	86.45	Putative vacuolar protein sorting-associated protein 17, Vps17 OS=Rosa chinensis...	[more]
tr\|A0A0D2QAJ1\|A0A0D2QAJ1_GOSRA	4.5e-184	85.71	Uncharacterized protein OS=Gossypium raimondii OX=29730 GN=B456_006G153000 PE=4 ...	[more]
tr\|A0A2I4GZE2\|A0A2I4GZE2_9ROSI	5.9e-184	84.95	sorting nexin 1-like isoform X2 OS=Juglans regia OX=51240 GN=LOC109012189 PE=4 S...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0035091	phosphatidylinositol binding

Vocabulary: **INTERPRO**
Term	Definition
IPR039358	Sorting_nexin-like
IPR015404	Vps5_C
IPR036871	PX_dom_sf
IPR027267	AH/BAR_dom_sf
IPR001683	Phox

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0035091	phosphatidylinositol binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10490	Carg10490	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10490-RA	Carg10490-RA-protein	polypeptide

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10490-RA.CDS.10	Carg10490-RA.CDS.10	CDS
Carg10490-RA.CDS.9	Carg10490-RA.CDS.9	CDS
Carg10490-RA.CDS.8	Carg10490-RA.CDS.8	CDS
Carg10490-RA.CDS.7	Carg10490-RA.CDS.7	CDS
Carg10490-RA.CDS.6	Carg10490-RA.CDS.6	CDS
Carg10490-RA.CDS.5	Carg10490-RA.CDS.5	CDS
Carg10490-RA.CDS.4	Carg10490-RA.CDS.4	CDS
Carg10490-RA.CDS.3	Carg10490-RA.CDS.3	CDS
Carg10490-RA.CDS.2	Carg10490-RA.CDS.2	CDS
Carg10490-RA.CDS.1	Carg10490-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10490-RA.exon.10	Carg10490-RA.exon.10	exon
Carg10490-RA.exon.9	Carg10490-RA.exon.9	exon
Carg10490-RA.exon.8	Carg10490-RA.exon.8	exon
Carg10490-RA.exon.7	Carg10490-RA.exon.7	exon
Carg10490-RA.exon.6	Carg10490-RA.exon.6	exon
Carg10490-RA.exon.5	Carg10490-RA.exon.5	exon
Carg10490-RA.exon.4	Carg10490-RA.exon.4	exon
Carg10490-RA.exon.3	Carg10490-RA.exon.3	exon
Carg10490-RA.exon.2	Carg10490-RA.exon.2	exon
Carg10490-RA.exon.1	Carg10490-RA.exon.1	exon

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	COILS	Coil	Coil	coord: 313..333
None	No IPR available	PANTHER	PTHR10555:SF170	SORTING NEXIN-18	coord: 13..379
None	No IPR available	CDD	cd07596	BAR_SNX	coord: 173..383 e-value: 1.59014E-52 score: 175.237
None	No IPR available	CDD	cd06859	PX_SNX1_2_like	coord: 17..130 e-value: 1.96052E-59 score: 189.712
IPR001683	Phox homologous domain	SMART	SM00312	PX_2	coord: 13..130 e-value: 7.2E-25 score: 98.6
IPR001683	Phox homologous domain	PFAM	PF00787	PX	coord: 16..129 e-value: 2.5E-24 score: 85.3
IPR001683	Phox homologous domain	PROSITE	PS50195	PX	coord: 15..134 score: 19.235
IPR027267	AH/BAR domain superfamily	GENE3D	G3DSA:1.20.1270.60		coord: 170..388 e-value: 4.2E-40 score: 139.9
IPR027267	AH/BAR domain superfamily	SUPERFAMILY	SSF103657	BAR/IMD domain-like	coord: 175..388
IPR036871	PX domain superfamily	GENE3D	G3DSA:3.30.1520.10		coord: 9..148 e-value: 2.4E-37 score: 129.9
IPR036871	PX domain superfamily	SUPERFAMILY	SSF64268	PX domain	coord: 12..131
IPR015404	Sorting nexin Vps5-like, C-terminal	PFAM	PF09325	Vps5	coord: 159..383 e-value: 9.1E-23 score: 80.9
IPR039358	Sorting nexin-like	PANTHER	PTHR10555	SORTING NEXIN	coord: 13..379