Carg10484-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10484-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	Calcium/calmodulin-dependent protein kinase
Location	Cucurbita_argyrosperma_scaffold_098 : 418994 .. 419818 (-)
Sequence length	825

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCCGCAGGGCGATTTACAGGCCTTCCTCACCGGCGGTGTTGCTGATGAACGGAAAGCAGAGCGGATGCCATTGGAGGAGGAGCCGGATCGGCCAGAAGTTCCTCCTGACTTCCCACCGGAATCTTTCTGGCTCTCCAAGGATGCGGAGTTCGACTGGTTCGATCGAAATGCCTTCTTAGAGCGGAAAGAATCCACTAAGGCCAGTTCTAATTCCACGAATTTGAATCCTAATTTACATACGCAATCTAATTCCAATTCGCAGCGATTTTCGTTGAATTTGAAGTCGAAGGCCTCGATTATTGGATTGCCGAAGCCTCAGAACACTACCTATGTCGATGGGAAGAATCGACGTAATTGCAAGTCCGGAAACATACGGTTGTTTCCGAAACGATCAGGATCCGGTGGAAAATCGGTTTCGTCGATGATCGAGCCTTCTTCTCCCAAGGTATCGTGTATGGGGAGAGTGAGATCGAAGAAGGACCGACATCGGCAGAAGACTAATAATCACCATCACTCATCAGAAGCAGAAATAGCAACAAACGCAAAGGAGAAGAAACCAGTCGAGAAACAGAGGAAAGGATTCTTCGCGAGTTTCCGCGCTGTTTTCCGGAACGGTAGAAGAAGGCAACCAGTCATCGAGCCGACTGCATCTTCCCTCACTAACTCGCCTCCCGAACAGGAAATCACAGCACCTCCTTCCGCCACTAATCCTCCGCCGCGCGACGAAACCGAACCGCCGTCCTTGGGCGGTTTGGAGCGATTCACATCGAGTAGAAGATCCAGTTCGTGGAGCGTAAGCGAGGCCGGTAAAGACGTGGAGTAG

mRNA sequence

ATGCCGCAGGGCGATTTACAGGCCTTCCTCACCGGCGGTGTTGCTGATGAACGGAAAGCAGAGCGGATGCCATTGGAGGAGGAGCCGGATCGGCCAGAAGTTCCTCCTGACTTCCCACCGGAATCTTTCTGGCTCTCCAAGGATGCGGAGTTCGACTGGTTCGATCGAAATGCCTTCTTAGAGCGGAAAGAATCCACTAAGGCCAGTTCTAATTCCACGAATTTGAATCCTAATTTACATACGCAATCTAATTCCAATTCGCAGCGATTTTCGTTGAATTTGAAGTCGAAGGCCTCGATTATTGGATTGCCGAAGCCTCAGAACACTACCTATGTCGATGGGAAGAATCGACGTAATTGCAAGTCCGGAAACATACGGTTGTTTCCGAAACGATCAGGATCCGGTGGAAAATCGGTTTCGTCGATGATCGAGCCTTCTTCTCCCAAGGTATCGTGTATGGGGAGAGTGAGATCGAAGAAGGACCGACATCGGCAGAAGACTAATAATCACCATCACTCATCAGAAGCAGAAATAGCAACAAACGCAAAGGAGAAGAAACCAGTCGAGAAACAGAGGAAAGGATTCTTCGCGAGTTTCCGCGCTGTTTTCCGGAACGGTAGAAGAAGGCAACCAGTCATCGAGCCGACTGCATCTTCCCTCACTAACTCGCCTCCCGAACAGGAAATCACAGCACCTCCTTCCGCCACTAATCCTCCGCCGCGCGACGAAACCGAACCGCCGTCCTTGGGCGGTTTGGAGCGATTCACATCGAGTAGAAGATCCAGTTCGTGGAGCGTAAGCGAGGCCGGTAAAGACGTGGAGTAG

Coding sequence (CDS)

ATGCCGCAGGGCGATTTACAGGCCTTCCTCACCGGCGGTGTTGCTGATGAACGGAAAGCAGAGCGGATGCCATTGGAGGAGGAGCCGGATCGGCCAGAAGTTCCTCCTGACTTCCCACCGGAATCTTTCTGGCTCTCCAAGGATGCGGAGTTCGACTGGTTCGATCGAAATGCCTTCTTAGAGCGGAAAGAATCCACTAAGGCCAGTTCTAATTCCACGAATTTGAATCCTAATTTACATACGCAATCTAATTCCAATTCGCAGCGATTTTCGTTGAATTTGAAGTCGAAGGCCTCGATTATTGGATTGCCGAAGCCTCAGAACACTACCTATGTCGATGGGAAGAATCGACGTAATTGCAAGTCCGGAAACATACGGTTGTTTCCGAAACGATCAGGATCCGGTGGAAAATCGGTTTCGTCGATGATCGAGCCTTCTTCTCCCAAGGTATCGTGTATGGGGAGAGTGAGATCGAAGAAGGACCGACATCGGCAGAAGACTAATAATCACCATCACTCATCAGAAGCAGAAATAGCAACAAACGCAAAGGAGAAGAAACCAGTCGAGAAACAGAGGAAAGGATTCTTCGCGAGTTTCCGCGCTGTTTTCCGGAACGGTAGAAGAAGGCAACCAGTCATCGAGCCGACTGCATCTTCCCTCACTAACTCGCCTCCCGAACAGGAAATCACAGCACCTCCTTCCGCCACTAATCCTCCGCCGCGCGACGAAACCGAACCGCCGTCCTTGGGCGGTTTGGAGCGATTCACATCGAGTAGAAGATCCAGTTCGTGGAGCGTAAGCGAGGCCGGTAAAGACGTGGAGTAG

Protein sequence

MPQGDLQAFLTGGVADERKAERMPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERKESTKASSNSTNLNPNLHTQSNSNSQRFSLNLKSKASIIGLPKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHRQKTNNHHHSSEAEIATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSLTNSPPEQEITAPPSATNPPPRDETEPPSLGGLERFTSSRRSSSWSVSEAGKDVE

Homology

[Close]

BLAST of Carg10484-RA vs. NCBI nr
Match: XP_022925565.1 (uncharacterized protein LOC111432965 [Cucurbita moschata])

HSP 1 Score: 372.5 bits (955), Expect = 1.3e-99
Identity = 237/271 (87.45%), Postives = 238/271 (87.82%), Query Frame = 0


Query: 4   GDLQAFLTGGVADERKAERMPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERK 63
           GDLQAFLTGGVADERKAERMPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERK
Sbjct: 24  GDLQAFLTGGVADERKAERMPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERK 83

Query: 64  ESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVDGKNRRNCKSG 123
           ESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVD KNRRNCKSG
Sbjct: 84  ESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVDAKNRRNCKSG 143

Query: 124 NIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXXXXXXXXXXXXXXATNAK 183
           NIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDR+ XXXXXXXXXXXX  ATNAK
Sbjct: 144 NIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRNRXXXXXXXXXXXXEIATNAK 203

Query: 184 EKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSLTNXXXXXXXXXXXXXXXXXXXXX 243
           EKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSL N                     
Sbjct: 204 EKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSLANSPPEQDIRAPPSATNHPPRDE 263

Query: 244 XXXXXLGGLERFTSSRRSSSWSVSEAGKDVE 275
                LGGLERFTSSRRSS WSVSE GKDVE
Sbjct: 264 TEPPSLGGLERFTSSRRSSLWSVSEGGKDVE 294

[Close]

BLAST of Carg10484-RA vs. NCBI nr
Match: XP_022977268.1 (uncharacterized protein LOC111477636 [Cucurbita maxima])

HSP 1 Score: 356.7 bits (914), Expect = 7.1e-95
Identity = 240/285 (84.21%), Postives = 241/285 (84.56%), Query Frame = 0


Query: 1   MPQGDLQAFLTGGVADERKA--------ERMPLEEEPDRPEVPPDFPPESFWLSKDAEFD 60
           MPQGDLQAFLTGGVADERKA        ERMPLEEEPDRPEVPPDFPPESFWLSKDAEFD
Sbjct: 1   MPQGDLQAFLTGGVADERKAATADADDRERMPLEEEPDRPEVPPDFPPESFWLSKDAEFD 60

Query: 61  WFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYV 120
           WFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYV
Sbjct: 61  WFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYV 120

Query: 121 DGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXXXXXXXX 180
           D KNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKK   XXXXXXXXX
Sbjct: 121 DAKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKXXXXXXXXXXXX 180

Query: 181 XXXXXXATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSLTN---XXXXXXX 240
           XXXXX ATNAKE KPVEKQRKGFFASFRAVFRN RRRQPVIEPTASSLTN          
Sbjct: 181 XXXXXIATNAKE-KPVEKQRKGFFASFRAVFRNSRRRQPVIEPTASSLTNSPPEQDIRAS 240

Query: 241 XXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSEAGKDVE 275
                              LGGLERFTSSRRSSSWSV+EAGKDVE
Sbjct: 241 PPRTTASLPNKIDETEPPSLGGLERFTSSRRSSSWSVNEAGKDVE 284

[Close]

BLAST of Carg10484-RA vs. NCBI nr
Match: XP_023543186.1 (uncharacterized protein LOC111803134 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 334.0 bits (855), Expect = 4.9e-88
Identity = 232/252 (92.06%), Postives = 234/252 (92.86%), Query Frame = 0


Query: 23  MPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERKESTKASSXXXXXXXXXXXX 82
           MPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERKESTKASS XXXXXXXXXXX
Sbjct: 1   MPLEEEPDRPEVPPDFPPESFWLSKDAEFDWFDRNAFLERKESTKASSNXXXXXXXXXXX 60

Query: 83  XXXXXXXXXXXXXSKASIIGLPKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSM 142
           XXXXX        SKASIIGLPKPQNTTYVD KNRRNCKSGNIRLFPKRSGSGGKSVSSM
Sbjct: 61  XXXXXQRFSLNLKSKASIIGLPKPQNTTYVDAKNRRNCKSGNIRLFPKRSGSGGKSVSSM 120

Query: 143 IEPSSPKVSCMGRVRSKKDRHXXXXXXXXXXXXXXXATNAKEKKPVEKQRKGFFASFRAV 202
           IEPSSPKVSCMGRVRSK+DR+ XXXXXXXXXXXX  ATNAKEKKPVEKQRKGFFASFRAV
Sbjct: 121 IEPSSPKVSCMGRVRSKRDRNRXXXXXXXXXXXXEIATNAKEKKPVEKQRKGFFASFRAV 180

Query: 203 FRNGRRRQPVIEPTASSLTNXXXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSS 262
           FRNGRRRQPVIEPTASSLTN  XXXXXXXXXXXXXXXXXXXXXXXX  GLERFTSSRRSS
Sbjct: 181 FRNGRRRQPVIEPTASSLTNSPXXXXXXXXXXXXXXXXXXXXXXXXXXGLERFTSSRRSS 240

Query: 263 SWSVSEAGKDVE 275
           SWSVSE GKDVE
Sbjct: 241 SWSVSEGGKDVE 252

[Close]

BLAST of Carg10484-RA vs. NCBI nr
Match: XP_022132549.1 (uncharacterized protein LOC111005381 [Momordica charantia])

HSP 1 Score: 302.8 bits (774), Expect = 1.2e-78
Identity = 184/287 (64.11%), Postives = 196/287 (68.29%), Query Frame = 0


Query: 1   MPQGDLQAFLTGGVADERK----AERMPLE---EEPDRPEVPPDFPPESFWLSKDAEFDW 60
           MPQGDLQAF +G VAD+RK     ER+PLE   EEPDRPEVPPDFPPESFWLSKDAEFDW
Sbjct: 1   MPQGDLQAFFSGSVADDRKPDGDGERLPLEDETEEPDRPEVPPDFPPESFWLSKDAEFDW 60

Query: 61  FDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVD 120
           FDRNAFLERKESTKASS       XXXXXXXXX         SKASIIGLPKPQNT YVD
Sbjct: 61  FDRNAFLERKESTKASSNSANLNPXXXXXXXXXSQRFSLNLKSKASIIGLPKPQNTAYVD 120

Query: 121 GKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXXXXXXXXX 180
            KNRRNCKSGNIRLFPKRSGSGGKSVS+MIEPSSPKVSCMG+VRSKKDR+          
Sbjct: 121 AKNRRNCKSGNIRLFPKRSGSGGKSVSAMIEPSSPKVSCMGKVRSKKDRN----RRKNHH 180

Query: 181 XXXXXATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSL----------TNX 240
                   AKE K VEKQ+KG FASFRA+FR+G RRQPV+EPTAS +           + 
Sbjct: 181 LHSSELATAKE-KTVEKQKKGLFASFRAIFRSGGRRQPVVEPTASLIDSPPEQDIIARHA 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSEAG 271
                                    LGGL RF S RRSSSWSVSEAG
Sbjct: 241 TPSAANPPPTEPLPSKISDEIEPPALGGLPRFASGRRSSSWSVSEAG 282

[Close]

BLAST of Carg10484-RA vs. NCBI nr
Match: XP_022972615.1 (uncharacterized protein LOC111471156 [Cucurbita maxima])

HSP 1 Score: 279.6 bits (714), Expect = 1.1e-71
Identity = 169/300 (56.33%), Postives = 184/300 (61.33%), Query Frame = 0


Query: 1   MPQGDLQAFLTGG-VADERKA-------------ERMPLE---EEPDRPEVPPDFPPESF 60
           MPQGDLQ F TG  VAD+RKA             ER+PLE   EEPDRPEVPPDFPPESF
Sbjct: 1   MPQGDLQTFFTGDIVADDRKAAGDDDQATLSDDGERLPLEEETEEPDRPEVPPDFPPESF 60

Query: 61  WLSKDAEFDWFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGL 120
           WLSKDAEFDWFDRNAF ERKESTKASS                         SKAS+IGL
Sbjct: 61  WLSKDAEFDWFDRNAFFERKESTKASSNSMNLNPNLHPQSNSNSQRFSTNLKSKASMIGL 120

Query: 121 PKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRH 180
           PKPQ T+YVD KNRRN KSGNIRLFPKRSGSGGKSVS+MIEPSSP VSCMG+V+SKKDR+
Sbjct: 121 PKPQKTSYVDAKNRRNGKSGNIRLFPKRSGSGGKSVSTMIEPSSPMVSCMGKVKSKKDRN 180

Query: 181 XXXXXXXXXXXXXXXATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASSLTN- 240
                               E+K +EKQ KGFFA F+A+FR+G RRQPV+EPTA SLTN 
Sbjct: 181 RQKTHHHSTELA------TAEEKSLEKQSKGFFACFQAIFRSGGRRQPVVEPTA-SLTNS 240

Query: 241 ---------XXXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSEAGKDV 274
                                              LGGL+RF S RRSSSWSVSE   DV
Sbjct: 241 PPEQGVRARDLTPSATNPPSTASHPSKIDETDPPSLGGLQRFASGRRSSSWSVSEVCIDV 293

[Close]

BLAST of Carg10484-RA vs. TAIR10
Match: AT3G52710.1 (unknown protein)

HSP 1 Score: 129.8 bits (325), Expect = 2.6e-30
Identity = 89/187 (47.59%), Postives = 111/187 (59.36%), Query Frame = 0


Query: 26  EEEPDRPEVPP------DFPPESFWLSKDAEFDWFDRNAFLERKESTKASSXXXXXXXXX 85
           E+ P   ++ P      DFPPES+ LSK+A+ +W + NAF ERKES K +S         
Sbjct: 27  EDSPHNSKIRPVSISAVDFPPESYSLSKEAQLEWLNDNAFFERKESQKGNS----SAPIS 86

Query: 86  XXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSV 145
           XXXXXXXXX       SKASII LPKPQ T + + K RRNC+     + PKR GS  KS 
Sbjct: 87  XXXXXXXXXSHRISLKSKASIIRLPKPQKTCFNEAKKRRNCRIARTLMIPKRIGSRLKSD 146

Query: 146 SSMIEPSSPKVSCMGRVRSKKDRHXXXXXXXXXXXXXXXATNAKEKKPVEKQRKGFFASF 205
            ++ EP SPKVSC+GRVRSK+DR                 TN+ + KPV  ++ GFFASF
Sbjct: 147 PTLSEPCSPKVSCIGRVRSKRDR------SRRMQRQKSGRTNSFKDKPVPVKKPGFFASF 203

Query: 206 RAVFRNG 207
           RA+FR G
Sbjct: 207 RAIFRTG 203

[Close]

BLAST of Carg10484-RA vs. TAIR10
Match: AT2G36220.1 (unknown protein)

HSP 1 Score: 122.1 bits (305), Expect = 5.4e-28
Identity = 94/274 (34.31%), Postives = 129/274 (47.08%), Query Frame = 0


Query: 1   MPQGDLQAFLTG---GVADERKAERMPLEEEPDRPEV-------PPDFPPESFWLSKDAE 60
           MPQ D++AF++    G +D RK     L ++   P         P DFPPES++LS DA+
Sbjct: 1   MPQVDIEAFVSSVCIGGSDHRKIVCETLADDSTIPPYYNNSAVSPSDFPPESYFLSNDAQ 60

Query: 61  FDWFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTT 120
            +W   NAF +RK+S K +S                         SKASIIGLPKPQ T 
Sbjct: 61  LEWLSDNAFFDRKDSQKGNS------GILNSNPNSNPSSQRFLLKSKASIIGLPKPQKTC 120

Query: 121 YVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXXXXXX 180
           + + K RR+  +G  R+  KR GS  K+  S++EPSSPKVSC+GRVRS+++R        
Sbjct: 121 FNEAKQRRH--AGKNRVILKRVGSRIKTDISLLEPSSPKVSCIGRVRSRRER-------- 180

Query: 181 XXXXXXXXATNAKEKKPVEKQRK-GFFASFRAVFR--NGRRRQPVIEPTASSLTNXXXXX 240
                      +   +PV + +K GF ASFRA+FR   G +     E   S+        
Sbjct: 181 ---SRRMHRQKSSRVEPVNRVKKPGFMASFRAIFRIKGGCKDVSARETHTSTRNTHDIRS 240

Query: 241 XXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRS 262
                                LGG+ RF S RR+
Sbjct: 241 RLPAEADEKSVFDGGEPVVPGLGGMTRFASGRRA 255

[Close]

BLAST of Carg10484-RA vs. TrEMBL
Match: tr|A0A0A0KKI1|A0A0A0KKI1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452670 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 3.4e-61
Identity = 200/282 (70.92%), Postives = 210/282 (74.47%), Query Frame = 0


Query: 1   MPQGDLQAFLTG-GVADERKAERMPLEEEP---DRPEVPPDFPPESFWLSKDAEFDWFDR 60
           MPQGDLQAF TG  VA     ER+PL+++    DR EVPPDFPPESFWLSKDAEFDWFDR
Sbjct: 1   MPQGDLQAFFTGAAVAGHDDGERLPLKDDKQDLDRGEVPPDFPPESFWLSKDAEFDWFDR 60

Query: 61  NAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVDGKN 120
           NAFLERKESTKASSXXXXXXXXXXXXXXXXXX       SKASIIGLPK QNT YV+ KN
Sbjct: 61  NAFLERKESTKASSXXXXXXXXXXXXXXXXXXRFSLNLKSKASIIGLPKSQNTAYVEAKN 120

Query: 121 RRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXXXXXXXXXXXX 180
           RRNCKSGNIRLFPKRSGS GKSVSSMIEPSSPKVSCMG+VRSK    XXXXXXXXXXXXX
Sbjct: 121 RRNCKSGNIRLFPKRSGSVGKSVSSMIEPSSPKVSCMGKVRSKXXXXXXXXXXXXXXXXX 180

Query: 181 XXATNAKEKKPVEKQRKGFFASFRA-VFRNGRRRQPV----IEPTASSLTNXXXXXXXXX 240
           XX               GFFASFRA +FR+G RRQPV              XXXXXXXXX
Sbjct: 181 XXXXXXXXXXXXXXXXXGFFASFRARIFRSGGRRQPVXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSEAGKDV 274
           XXXXXXXX         LGG+ RF S RRSSSWSVSEAG +V
Sbjct: 241 XXXXXXXXKIDETEPPALGGMHRFASGRRSSSWSVSEAGIEV 282

[Close]

BLAST of Carg10484-RA vs. TrEMBL
Match: tr|A0A1S3CHS2|A0A1S3CHS2_CUCME (uncharacterized protein LOC103500902 OS=Cucumis melo OX=3656 GN=LOC103500902 PE=4 SV=1)

HSP 1 Score: 224.9 bits (572), Expect = 2.1e-55
Identity = 136/164 (82.93%), Postives = 141/164 (85.98%), Query Frame = 0


Query: 1   MPQGDLQAFLTGGVADERKAERMPLE---EEPDRPEVPPDFPPESFWLSKDAEFDWFDRN 60
           MPQGDLQAF TG VA +   ER+PLE   EEPDR EVPPDFPPESFWLSKDAEFDWFDRN
Sbjct: 2   MPQGDLQAFFTGDVAGDDGGERLPLEDEKEEPDRGEVPPDFPPESFWLSKDAEFDWFDRN 61

Query: 61  AFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKPQNTTYVDGKNR 120
           AF ERKESTKASSXXXXXXXXXXXXXXXXX        SKASIIGLPK QNT YV+ KNR
Sbjct: 62  AFFERKESTKASSXXXXXXXXXXXXXXXXXQRFSLNLKSKASIIGLPKSQNTAYVEVKNR 121

Query: 121 RNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKD 162
           RNCKSGNIRLFPKRSGS GK+VSSMIEPSSPKVSCMG+VRSKKD
Sbjct: 122 RNCKSGNIRLFPKRSGSVGKAVSSMIEPSSPKVSCMGKVRSKKD 165

[Close]

BLAST of Carg10484-RA vs. TrEMBL
Match: tr|M5VQK1|M5VQK1_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G109200 PE=4 SV=1)

HSP 1 Score: 205.3 bits (521), Expect = 1.8e-49
Identity = 164/302 (54.30%), Postives = 189/302 (62.58%), Query Frame = 0


Query: 1   MPQGDLQAFLT---GGVADERKA-----------ERMPLEEEPDRPEVPPDFPPESFWLS 60
           MPQ DL+  ++   GG  D + A           +  P E++ D P VPPDFPPESFWLS
Sbjct: 1   MPQVDLETLVSACAGGSMDRKIACETQADAITGVQDPPEEDDADEPAVPPDFPPESFWLS 60

Query: 61  KDAEFDWFDRNAFLERKESTKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGLPKP 120
           KDAE+DWFDRNAF ERK+STK   XXXXXXXXXXXXXXXXXXXXXXXXX    IIGLPKP
Sbjct: 61  KDAEYDWFDRNAFFERKDSTK-GXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXIIGLPKP 120

Query: 121 QNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDRHXXX 180
           Q   YVD KNRRNCK+GN RLFPKRSGS GKS + MIEPSSPKVSCMGRVRSK+DR    
Sbjct: 121 QKHNYVDTKNRRNCKAGNTRLFPKRSGSVGKSDAPMIEPSSPKVSCMGRVRSKRDR---- 180

Query: 181 XXXXXXXXXXXXATNAKEK--KPVEKQRKGFFASFRAVFRNGRRRQPVIEPTASS----- 240
                XXXXX  A ++ EK  KPVE+++ GFFASFRA+FR+G R +    P A++     
Sbjct: 181 -KRRFXXXXXSSAESSMEKAIKPVERRKTGFFASFRAMFRHGHRDKSAKSPYAAADSPPR 240

Query: 241 --------LTNXXXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSEAGK 274
                     +                          LGG++RF S RRS SW V EAG 
Sbjct: 241 HSSVMSGRARDRSAAYDFDTLSIDSLPRQSVESEPPGLGGMKRFVSGRRSGSW-VGEAGI 295

[Close]

BLAST of Carg10484-RA vs. TrEMBL
Match: tr|A0A2P5B0X2|A0A2P5B0X2_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_281640 PE=4 SV=1)

HSP 1 Score: 189.5 bits (480), Expect = 1.0e-44
Identity = 162/305 (53.11%), Postives = 187/305 (61.31%), Query Frame = 0


Query: 1   MPQGDLQAFLT----GGVADERK--AERMPLEEEP-------DRPEVPPDFPPESFWLSK 60
           MPQ DL+  ++    GG + +RK   E +   E+P       + PEVPPDFPPESFWLSK
Sbjct: 1   MPQVDLETLVSVCAGGGGSMDRKIACETLADSEKPPGYGNADEEPEVPPDFPPESFWLSK 60

Query: 61  DAEFDWFDRNAFLERKES----TKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGL 120
           DAEFDWFDRN F ERKES         XXXXXXXXXXXXXXXXXXXXXXXXX  A+IIGL
Sbjct: 61  DAEFDWFDRNVFYERKESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIIGL 120

Query: 121 PKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSKKDR- 180
           PKPQ T +VD K+R+NC+ GN RLFPKRSGS GKS   MIEPSSPKVSCMGRVRSK+DR 
Sbjct: 121 PKPQKTNFVDAKHRKNCRLGNTRLFPKRSGSSGKSDGPMIEPSSPKVSCMGRVRSKRDRK 180

Query: 181 --HXXXXXXXXXXXXXXXATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQP--------- 240
              XXXXXXXXX      + + ++  P E+++ GFFASFRA+FR G R +          
Sbjct: 181 RXXXXXXXXXXXSSTEPVSVSVEKVTPAERRKTGFFASFRAIFRTGCREKSGGTSVSGRV 240

Query: 241 ---VIEPTASSLTNXXXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSE 274
                 P   SL+                           L GL+RF S RRS SW V E
Sbjct: 241 ALRTESPPRDSLSG--RSRDFSGVDNDAPSRRSVQIEPPGLVGLQRFASGRRSGSW-VGE 300

[Close]

BLAST of Carg10484-RA vs. TrEMBL
Match: tr|A0A2P5EC05|A0A2P5EC05_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_210550 PE=4 SV=1)

HSP 1 Score: 185.3 bits (469), Expect = 1.9e-43
Identity = 166/305 (54.43%), Postives = 189/305 (61.97%), Query Frame = 0


Query: 1   MPQGDLQAFLT----GGVADERK--AERMPLEEEP-------DRPEVPPDFPPESFWLSK 60
           MPQ DL+  ++    GG + +RK   E +   E+P       + PEVPPDFPPESFWLSK
Sbjct: 1   MPQVDLETLVSACAGGGGSMDRKIACETLADAEKPPGYGNADEEPEVPPDFPPESFWLSK 60

Query: 61  DAEFDWFDRNAFLERKES----TKASSXXXXXXXXXXXXXXXXXXXXXXXXXSKASIIGL 120
           DAEFDWFDRNAF ERKES         XXXXXXXXXXXXXXXXXXXXXXXXX  A+IIGL
Sbjct: 61  DAEFDWFDRNAFYERKESQXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXAAIIGL 120

Query: 121 PKPQNTTYVDGKNRRNCKSGNIRLFPKRSGSGGKSVSSMIEPSSPKVSCMGRVRSK---K 180
           PKPQ T +VD K+R+NC+ GN RLFPKRSGS GKS   MIEPSSPKVSCMGRVRSK    
Sbjct: 121 PKPQKTNFVDAKHRKNCRLGNTRLFPKRSGSSGKSDGPMIEPSSPKVSCMGRVRSKXXXX 180

Query: 181 DRHXXXXXXXXXXXXXXXATNAKEKKPVEKQRKGFFASFRAVFRNGRRRQP--------- 240
              XXXXXXXXXXXXXX +   ++  P E+++ GFFASFRA+FR G R +          
Sbjct: 181 XXXXXXXXXXXXXXXXXVSVTVEKVTPAERRKTGFFASFRAIFRTGCREKSGGTSVSGRV 240

Query: 241 ---VIEPTASSLTNXXXXXXXXXXXXXXXXXXXXXXXXXXLGGLERFTSSRRSSSWSVSE 274
                 P   S++                           LGGL RF S RRS SW V E
Sbjct: 241 ALRTESPPRDSVS--ARSRDFSGVDIDAPSRRSVEIEPPGLGGLHRFASGRRSGSW-VGE 300

The following BLAST results are available for this feature:

BLAST of Carg10484-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022925565.1	1.3e-99	87.45	uncharacterized protein LOC111432965 [Cucurbita moschata]	[more]
XP_022977268.1	7.1e-95	84.21	uncharacterized protein LOC111477636 [Cucurbita maxima]	[more]
XP_023543186.1	4.9e-88	92.06	uncharacterized protein LOC111803134 [Cucurbita pepo subsp. pepo]	[more]
XP_022132549.1	1.2e-78	64.11	uncharacterized protein LOC111005381 [Momordica charantia]	[more]
XP_022972615.1	1.1e-71	56.33	uncharacterized protein LOC111471156 [Cucurbita maxima]	[more]

BLAST of Carg10484-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT3G52710.1	2.6e-30	47.59	unknown protein	[more]
AT2G36220.1	5.4e-28	34.31	unknown protein	[more]

BLAST of Carg10484-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description

BLAST of Carg10484-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0KKI1\|A0A0A0KKI1_CUCSA	3.4e-61	70.92	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G452670 PE=4 SV=1	[more]
tr\|A0A1S3CHS2\|A0A1S3CHS2_CUCME	2.1e-55	82.93	uncharacterized protein LOC103500902 OS=Cucumis melo OX=3656 GN=LOC103500902 PE=...	[more]
tr\|M5VQK1\|M5VQK1_PRUPE	1.8e-49	54.30	Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_7G109200 PE=4 SV=1	[more]
tr\|A0A2P5B0X2\|A0A2P5B0X2_PARAD	1.0e-44	53.11	Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_281640 PE...	[more]
tr\|A0A2P5EC05\|A0A2P5EC05_9ROSA	1.9e-43	54.43	Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_210550 PE=4 S...	[more]

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg10484	Carg10484	gene

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10484-RA.CDS.1	Carg10484-RA.CDS.1	CDS

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg10484-RA.exon.1	Carg10484-RA.exon.1	exon

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg10484-RA	Carg10484-RA-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 231..245
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 212..230
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 254..268
None	No IPR available	MOBIDB_LITE	mobidb-lite	disorder_prediction	coord: 207..274
None	No IPR available	PANTHER	PTHR34120:SF2	SUBFAMILY NOT NAMED	coord: 1..268
None	No IPR available	PANTHER	PTHR34120	FAMILY NOT NAMED	coord: 1..268