Carg10117 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TGCCCTAATTTTTTTGTGTTCGTTTGGGAGCAAGTAGAAGGCGAGGTTGAAGATGACTGCGCCAGACACTGTAGCTTCCTCTTCCCAAGTGAAGGTATAATTCTGTCCTCCCTTTCTCTTTAATGGCGGAAAGCGACCTTCTGCACTCTTTCGCACTTCGTTTTCTGCTTCCTCTTTTTCTTGAGGCTTACTTCGGTCTTCCGTTTTTTGTGGAATTTATTGGTGCTTTGTTTGATTCTGAGGATACGAGTAGTTTACTCAGTGGTGTACCGGTGTTTGGTTTATTCGAACTCTGATATTGTTTTTTGGACATAATCCTTGGGAAGATACTTCTACTGATTTTAAGAAATCTCGCTATTTAGTATACACATTAAATAGATTTTGGTTCTACTATGGATCTTACTTTTATTCACAGTGCCGTGGTAATTAATAGGCTACTCGTTGAAAGTATTGGTTTTTTTTTGGGTACTTCGGATTGTTCTTACCCTCCTTGGACTTGGGGTGCTCGTTTTAGTTTAGGTGTTGCTATTGTTGGAAATGATGGATTGCGTGGTCCAGAAACATTGTTCTGCTCTCATCTACTGAGACCATTCTTCGAACTTCATCTGAGTGAGTTAAACTAGCCGACAAACGAATCCAATTGACCCAAAATAAGTTAGCGTCTTTTCCTTAAAAATACCGTGCCAGCTCCCCTCCTTCTTTCTCCTTTAGACAAACGATCGGCTCTCTTTCTCAGAGTTTCACATCGAAAAAGTATCGGAGAAGGGTATGTATCGCATCACATCTCACTTGGTTCGTGTTCTACTTTGATTTCAACTCGGGACAGTAGGACTGGTTGAGCTTTGCTGGTTTATATTCATGATTTAGAGTCGTAACGTTAATAGATATTATACATTGGAGGCCCCAAAGGGAGTGGTCTGGTCGGCTAGACCCGCGGTATTTGAATCTTCTGGTGGGCCTTAGGTGCAGACTTTCTTAAAAGGATAAAAGATAGCCGTAGTAGGTTGGCAGGCATGTATTCTGAGTGTTTTGCACCCGTTTGTTCATTTCCCTAATCTTAGCCCTCTCGCTCCCTCCGTCTCTTCTTCTGTTTTCCTTTTTTAGACTAGCAGTCCAGGATTAAAACCAACTAAACCTAAGCGCTTACACCCTTATTTAAAACTAGGCAGGAAAATCCTTCCTTTTGAGAGTAAAAGAGTGCTTGTTTACCTCTCAAGCTTGGATCTATATGAATCTGGAGGAGTGTTTAAAATGTTCTGTTGATTGTAATTGCCTCTTCGATAAGTAAATACAGGTAAAAATCGACTGTATTTCAACTTAAAAAAAAAAAAAAAAGAATTAAAATTTACTCTTTACCGATGCCCTATTGCTCACTTATTTCTATGCAAATGACGAAGGGAAATGAAAATGGAGAATAATTGCTATCAGATATACCCCCCTCATCTTACTTATTCATTTCCCCCCCGTTTTTATTTAATGGTTTCAGGTGAAGAAGAAAAAGCAGAAGACTGCCGCAGTTTCTAATTCCGGCATTGATCTGAAGTCCACTATCCATGGGCATGCATTGTTCTTTGACAAGTTAGTGGAACTTATCCCAGCGAGGTTCTACTTACCTACTGATGAAAAAGAAAAACCTTGGTTTCAGGGCCTTAGCAAGACGGAAAAAGCAACGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGTACGAAGAGATCGTATGGATCCGGAAAAGTCTTCTAAATCAACCCTTGATTTGCTTAAAGAAAGCTTAGAAAATGAAAAGTTGAAAAATGAGAGTGATGATGATGAAGAGGATGTTAAGCCAATGGCATCTGGGTTGGGTGGTGATGACCGGTCAGTGACATATGAAGAACTTAGACAACGGCTTCATCGAAAAATTGAGGAGTTCCGAGGGAATAGAAATACAGGATGTTCAAACAGGGAAAAGAAGAGAAATGAAAGAAACGAGAGAAGGGAACTTTTCCAGAAGAAGCGCAAGAGAGAAAGTGAGTCTGAGGACAAAAAATTAGTCACTACCCAATCGAGGGTCGAAATGGAGAGGAATGTAGAGGAGGCCACCAAAGAACTTGCGTTTGGTCATGTTAAACTAGGAACTGAAGAAGAGGACGGCAAGAATAAGAAGAGAAAACTCTCCAAGCTGAAGGAGCTTGAAAAGGCAAAAAAGTTGGAGGAAGCGAAGAAGGACCCTGAAACGGGCGAGATAATATTGAAGAAGCATTCTTGGAAAGCAGCAACAAGTAGAGCTGCTGGGGTTAAAGTTCATGATGATCCTCAGCGTCTGATGAAGAGCTTACGGAAAGAAAAGAAACAGCAGCTGAAGAGTATTGAGAAATGGAAAGGAAGGATTGAAACCACCCAAAAAATGAAATCAGAAAGGCAACAAAAGAGATCAGGAAACATAGCTCAGAAAATCCATGATAAGAAGATGAAACGTATTGCCAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATCAACGAAAGCACCGGATAAAAGTGAAGAGAAGTAAGTGCAACCTTTACAATTTCTCTCCCAGTTTTGCTCTCTAGCTTTGAGGTTGGAAATGAAATTTGTTGATTTATTCACATCCTTGATAACCTTCGCCTCATATATGTTCGGGAACGTCATTTTAACATCAAAATTTGCGGACCCAATTCATCAATCAAATCAGTTACCACCCTAGTTTGAAACTTCCCTTGATCAGCATCAGGTTTAAGATTATTAGTTCGAGATTGTATGTCTCTGGCAGTGTTAGTATTTAGTTCACAAATTACCAAGCAATTCTCGGTTGAGTAGTACTTGGTACACAATTTTTGTCTAATATGTAGTTCTCTTACTCCCAAAATTTAGACTAGCCAGTGTTCTTAGTTTTCAAGTTCGATTGGTCTATGGGACCGATAAATGTGCTTCATGAATATGATCGAACAACCTTGATTCACCTGAAGATGATATCGCAGGTAATTCTATTGAGAAAGTATTGCAACCGCCTTCAATGGCGTTTGGCATTCTATTAATTAGTAGTGTTCTATAGGCTTATCTTCTTGTTATGAAAATGGCAGTTCATTATTGGTTACATATATTGGTTTAGTGTTGCTCTGTTCATATCCTTGCTTCATTGTGAAACATCCCAATCTCTTATTAAACATCCTACATTGAACATTGGGGTTTTGAAAGAGATGACAGAACCAGAAACTATGTCCTTACACGAAAACAAAGCAAGAGAAAAACAAACCAACTGATATCAAACATAATAACCATCTGTTCTAAACCACCCTGGTCCCGGCAGTTCCCTTAGGAGGCTCTCCAGGAACTGCACTTCCTCCGCCCATGCCGTAGTCGGTATCCCAATAACCAGGGCCGTAGCGGCGGCTGAAGATCCCAGCGTGGAGCAGGAGCAGATACAGAAGCTGGGTGATGGTCAATATTATTATGAAAGCTTCCACAACTCTCAGCCTCCACCCTCTGTGGCCTCCTATGCTGATTTGCTTGCAGGCCAAGCTGCGGAAAGGGAAATGAAAAGGAATCTTAGAATTACTTCTCTAAATAGAAGAGAAATGGTTGTGAAAGTTGTAGAAAGTTACCCAAAAGCTAGAACAGTTACAGCCCAAGTGAGCAATGAAGTTGATCCTGCGCCGGCGAGGCTGTCGCTCCTCCAAGCTCTGATATGGTAGAGTCCAGCCAGTTTTGATGCCACTCCCATAACTGCTGTTAGCATTGCAAATGTCAAGAAAAATGGCGTCGCTCCGTTGCCTCCCATACCTTGTCCAGTCCAAAAACAACCGTCAATGTCTCTTATTTGGGTTTAAAAAAAAAATAATGAGGCCGAACAATCCAAGCATAGGTCATGATTAGCATAATCATGCTTTTGTAAAAGCTGACAATTTGTGTTTAAGAGAGAGCTTTTGCATTTTTTTCCCACTAAGAACAAACAGAATCTCT TGCCCTAATTTTTTTGTGTTCGTTTGGGAGCAAGTAGAAGGCGAGGTTGAAGATGACTGCGCCAGACACTGTAGCTTCCTCTTCCCAAGTGAAGGTGAAGAAGAAAAAGCAGAAGACTGCCGCAGTTTCTAATTCCGGCATTGATCTGAAGTCCACTATCCATGGGCATGCATTGTTCTTTGACAAGTTAGTGGAACTTATCCCAGCGAGGTTCTACTTACCTACTGATGAAAAAGAAAAACCTTGGTTTCAGGGCCTTAGCAAGACGGAAAAAGCAACGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGTACGAAGAGATCGTATGGATCCGGAAAAGTCTTCTAAATCAACCCTTGATTTGCTTAAAGAAAGCTTAGAAAATGAAAAGTTGAAAAATGAGAGTGATGATGATGAAGAGGATGTTAAGCCAATGGCATCTGGGTTGGGTGGTGATGACCGGTCAGTGACATATGAAGAACTTAGACAACGGCTTCATCGAAAAATTGAGGAGTTCCGAGGGAATAGAAATACAGGATGTTCAAACAGGGAAAAGAAGAGAAATGAAAGAAACGAGAGAAGGGAACTTTTCCAGAAGAAGCGCAAGAGAGAAAGTGAGTCTGAGGACAAAAAATTAGTCACTACCCAATCGAGGGTCGAAATGGAGAGGAATGTAGAGGAGGCCACCAAAGAACTTGCGTTTGGTCATGTTAAACTAGGAACTGAAGAAGAGGACGGCAAGAATAAGAAGAGAAAACTCTCCAAGCTGAAGGAGCTTGAAAAGGCAAAAAAGTTGGAGGAAGCGAAGAAGGACCCTGAAACGGGCGAGATAATATTGAAGAAGCATTCTTGGAAAGCAGCAACAAGTAGAGCTGCTGGGGTTAAAGTTCATGATGATCCTCAGCGTCTGATGAAGAGCTTACGGAAAGAAAAGAAACAGCAGCTGAAGAGTATTGAGAAATGGAAAGGAAGGATTGAAACCACCCAAAAAATGAAATCAGAAAGGCAACAAAAGAGATCAGGAAACATAGCTCAGAAAATCCATGATAAGAAGATGAAACGTATTGCCAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATCAACGAAAGCACCGGATAAAAGTGAAGAGAAGTAAGTGCAACCTTTACAATTTCTCTCCCAGTTTTGCTCTCTAGCTTTGAGGTTGGAAATGAAATTTGTTGATTTATTCACATCCTTGATAACCTTCGCCTCATATATGTTCGGGAACGTCATTTTAACATCAAAATTTGCGGACCCAATTCATCAATCAAATCAGTTACCACCCTAGTTTGAAACTTCCCTTGATCAGCATCAGGTTTAAGATTATTAGTTCGAGATTGTATGTCTCTGGCAGTGTTAGTATTTAGTTCACAAATTACCAAGCAATTCTCGGTTGAGTAGTACTTGGTACACAATTTTTGTCTAATATGTAGTTCTCTTACTCCCAAAATTTAGACTAGCCAGTGTTCTTAGTTTTCAAGTTCGATTGGTCTATGGGACCGATAAATGTGCTTCATGAATATGATCGAACAACCTTGATTCACCTGAAGATGATATCGCAGGTAATTCTATTGAGAAAGTATTGCAACCGCCTTCAATGGCGTTTGGCATTCTATTAATTAGTAGTGTTCTATAGGCTTATCTTCTTGTTATGAAAATGGCAGTTCATTATTGGTTACATATATTGGTTTAGTGTTGCTCTGTTCATATCCTTGCTTCATTGTGAAACATCCCAATCTCTTATTAAACATCCTACATTGAACATTGGGGTTTTGAAAGAGATGACAGAACCAGAAACTATGTCCTTACACGAAAACAAAGCAAGAGAAAAACAAACCAACTGATATCAAACATAATAACCATCTGTTCTAAACCACCCTGGTCCCGGCAGTTCCCTTAGGAGGCTCTCCAGGAACTGCACTTCCTCCGCCCATGCCGTAGTCGGTATCCCAATAACCAGGGCCGTAGCGGCGGCTGAAGATCCCAGCGTGGAGCAGGAGCAGATACAGAAGCTGGGTGATGGTCAATATTATTATGAAAGCTTCCACAACTCTCAGCCTCCACCCTCTGTGGCCTCCTATGCTGATTTGCTTGCAGGCCAAGCTGCGGAAAGGGAAATGAAAAGGAATCTTAGAATTACTTCTCTAAATAGAAGAGAAATGGTTGTGAAAGTTGTAGAAAGTTACCCAAAAGCTAGAACAGTTACAGCCCAAGTGAGCAATGAAGTTGATCCTGCGCCGGCGAGGCTGTCGCTCCTCCAAGCTCTGATATGGTAGAGTCCAGCCAGTTTTGATGCCACTCCCATAACTGCTGTTAGCATTGCAAATGTCAAGAAAAATGGCGTCGCTCCGTTGCCTCCCATACCTTGTCCAGTCCAAAAACAACCGTCAATGTCTCTTATTTGGGTTTAAAAAAAAAATAATGAGGCCGAACAATCCAAGCATAGGTCATGATTAGCATAATCATGCTTTTGTAAAAGCTGACAATTTGTGTTTAAGAGAGAGCTTTTGCATTTTTTTCCCACTAAGAACAAACAGAATCTCT ATGACTGCGCCAGACACTGTAGCTTCCTCTTCCCAAGTGAAGGTGAAGAAGAAAAAGCAGAAGACTGCCGCAGTTTCTAATTCCGGCATTGATCTGAAGTCCACTATCCATGGGCATGCATTGTTCTTTGACAAGTTAGTGGAACTTATCCCAGCGAGGTTCTACTTACCTACTGATGAAAAAGAAAAACCTTGGTTTCAGGGCCTTAGCAAGACGGAAAAAGCAACGGCTAAGAAGGAATCAAAGGAAAATCTTAAGAAAGTACGAAGAGATCGTATGGATCCGGAAAAGTCTTCTAAATCAACCCTTGATTTGCTTAAAGAAAGCTTAGAAAATGAAAAGTTGAAAAATGAGAGTGATGATGATGAAGAGGATGTTAAGCCAATGGCATCTGGGTTGGGTGGTGATGACCGGTCAGTGACATATGAAGAACTTAGACAACGGCTTCATCGAAAAATTGAGGAGTTCCGAGGGAATAGAAATACAGGATGTTCAAACAGGGAAAAGAAGAGAAATGAAAGAAACGAGAGAAGGGAACTTTTCCAGAAGAAGCGCAAGAGAGAAAGTGAGTCTGAGGACAAAAAATTAGTCACTACCCAATCGAGGGTCGAAATGGAGAGGAATGTAGAGGAGGCCACCAAAGAACTTGCGTTTGGTCATGTTAAACTAGGAACTGAAGAAGAGGACGGCAAGAATAAGAAGAGAAAACTCTCCAAGCTGAAGGAGCTTGAAAAGGCAAAAAAGTTGGAGGAAGCGAAGAAGGACCCTGAAACGGGCGAGATAATATTGAAGAAGCATTCTTGGAAAGCAGCAACAAGTAGAGCTGCTGGGGTTAAAGTTCATGATGATCCTCAGCGTCTGATGAAGAGCTTACGGAAAGAAAAGAAACAGCAGCTGAAGAGTATTGAGAAATGGAAAGGAAGGATTGAAACCACCCAAAAAATGAAATCAGAAAGGCAACAAAAGAGATCAGGAAACATAGCTCAGAAAATCCATGATAAGAAGATGAAACGTATTGCCAAGAGGGAGAAGAAACTTATGCGCCCTGGGTTCGAAGGTCGCAAGGAAGGTTTCATCAACGAAAGCACCGGATAA MTAPDTVASSSQVKVKKKKQKTAAVSNSGIDLKSTIHGHALFFDKLVELIPARFYLPTDEKEKPWFQGLSKTEKATAKKESKENLKKVRRDRMDPEKSSKSTLDLLKESLENEKLKNESDDDEEDVKPMASGLGGDDRSVTYEELRQRLHRKIEEFRGNRNTGCSNREKKRNERNERRELFQKKRKRESESEDKKLVTTQSRVEMERNVEEATKELAFGHVKLGTEEEDGKNKKRKLSKLKELEKAKKLEEAKKDPETGEIILKKHSWKAATSRAAGVKVHDDPQRLMKSLRKEKKQQLKSIEKWKGRIETTQKMKSERQQKRSGNIAQKIHDKKMKRIAKREKKLMRPGFEGRKEGFINESTG
BLAST of Carg10117 vs. NCBI nr
Match: XP_023005979.1 (surfeit locus protein 6-like [Cucurbita maxima]) HSP 1 Score: 568.5 bits (1464), Expect = 1.6e-158 Identity = 362/364 (99.45%), Postives = 362/364 (99.45%), Query Frame = 0
BLAST of Carg10117 vs. NCBI nr
Match: XP_022959287.1 (arginine and glutamate-rich protein 1-B-like [Cucurbita moschata]) HSP 1 Score: 563.9 bits (1452), Expect = 3.9e-157 Identity = 341/364 (93.68%), Postives = 343/364 (94.23%), Query Frame = 0
BLAST of Carg10117 vs. NCBI nr
Match: XP_023549468.1 (nucleolar protein 58-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 557.8 bits (1436), Expect = 2.8e-155 Identity = 355/364 (97.53%), Postives = 355/364 (97.53%), Query Frame = 0
BLAST of Carg10117 vs. NCBI nr
Match: XP_004147169.1 (PREDICTED: surfeit locus protein 6-like [Cucumis sativus] >KGN61554.1 hypothetical protein Csa_2G169780 [Cucumis sativus]) HSP 1 Score: 468.0 bits (1203), Expect = 2.9e-128 Identity = 308/366 (84.15%), Postives = 326/366 (89.07%), Query Frame = 0
BLAST of Carg10117 vs. NCBI nr
Match: XP_008460697.1 (PREDICTED: surfeit locus protein 6-like [Cucumis melo]) HSP 1 Score: 454.5 bits (1168), Expect = 3.3e-124 Identity = 304/366 (83.06%), Postives = 321/366 (87.70%), Query Frame = 0
BLAST of Carg10117 vs. TAIR10
Match: AT5G05210.1 (Surfeit locus protein 6) HSP 1 Score: 235.0 bits (598), Expect = 7.5e-62 Identity = 171/372 (45.97%), Postives = 222/372 (59.68%), Query Frame = 0
BLAST of Carg10117 vs. TAIR10
Match: AT2G27750.1 (Surfeit locus protein 6) HSP 1 Score: 107.5 bits (267), Expect = 1.8e-23 Identity = 62/144 (43.06%), Postives = 87/144 (60.42%), Query Frame = 0
BLAST of Carg10117 vs. TrEMBL
Match: tr|A0A0A0LKJ0|A0A0A0LKJ0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G169780 PE=4 SV=1) HSP 1 Score: 468.0 bits (1203), Expect = 1.9e-128 Identity = 308/366 (84.15%), Postives = 326/366 (89.07%), Query Frame = 0
BLAST of Carg10117 vs. TrEMBL
Match: tr|A0A1S3CD16|A0A1S3CD16_CUCME (surfeit locus protein 6-like OS=Cucumis melo OX=3656 GN=LOC103499465 PE=4 SV=1) HSP 1 Score: 454.5 bits (1168), Expect = 2.2e-124 Identity = 304/366 (83.06%), Postives = 321/366 (87.70%), Query Frame = 0
BLAST of Carg10117 vs. TrEMBL
Match: tr|A0A1S3CMY7|A0A1S3CMY7_CUCME (surfeit locus protein 6 OS=Cucumis melo OX=3656 GN=LOC103502306 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 1.1e-110 Identity = 253/351 (72.08%), Postives = 283/351 (80.63%), Query Frame = 0
BLAST of Carg10117 vs. TrEMBL
Match: tr|A0A0A0LNJ3|A0A0A0LNJ3_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G001420 PE=4 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 4.2e-107 Identity = 241/351 (68.66%), Postives = 271/351 (77.21%), Query Frame = 0
BLAST of Carg10117 vs. TrEMBL
Match: tr|A0A2C9UCT1|A0A2C9UCT1_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_15G046900 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.5e-85 Identity = 230/349 (65.90%), Postives = 276/349 (79.08%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |