Carg10030 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TTCTTGTCGTCCTGTTCCTGCACGTCTGCTTTCCTTTTAATCAGTCTTTTGGAGCGCTAAACCCGGGGGATGGATGGATGGATGGATGGATGAATTAACGAAGCTTTGATTCTCTGTTTCTCTCCTTTTTTTTATTCACTTTTCACTAATGGAAGTCGCTCAAAATCTGTCCATGGTGGTTTCCGATCATCTTCACCAGTTCTTGTCTTCTCCGGTGAGTCCCAAGTTTGAATTCCTTACATGGGTAGCTGTTTTTTTTTTTCTTTTTTTCTTACTGGGTTTCGTGTTCTGATTTCAGGGGAATTAGATCTTGAAGTAGAATTAGCAATGGGCGGTGGCGGTGACGGTGGTGGTGGCTGTTTACCTTCTCCGATGAGTAATAACAGGAAATTGAGTTCGTCTTTCTTGTTTAGAAGTTCTTCTTCAAAGGGATTTTCCGAAACAGAGGCTGTAATGAGTCCAACTTCAATTCTCGAACCATTTATGGGTCTGAGAAGTTCGTTTTGGTCGGAATCAAATTCGCCCAGAACGCCATTAACAGAGTCCAAACGGCCGTGGGATTCGAAAGGGATCGGTCTCGGCATTGTCGATGCTCTAACGGAGGAGAATTCCGACCAGAAACCCACAAAATCCGACACCCGAATGGTTCTGTTGGGATCTCAATTAAAGATTCAAATTCCTCCTCTACCGCAGTTCGTTTCTCCGACCGATGAGTCTCCGAGATCGCCGGCGGAATTCGGGATCAAGACAAGGAATCCCCATCTGGGTTCCTTATCCCCTGTTTCATCTCTGTCTCCGGCGAAGAAATCGTCGATCTCCGGCCATGAAACTCCCACTTCGCCTCTGGTTTTCACCGGCTGTCTCTCCGCCGACGAAATCGAACAATCAGAGGACTACACTTGCGTGATCTCTCACGGCCCAAATCCTCGAACTACTCATATATTCGGCGATTGCGTAATTGAAAGCGGCGCCGGCGTATATTCACCGGCGAGAAAAGAAAATGGGTATTTCAGAGATCGAACGAGCTTTTCCTCTGAAAATTTCCTCAGTTTTTGTTACAATTGCAAGAAGAAACTCGAAGAAGGCAAAGATATTTACATTTACAGGTCGGAATCTGAAAATTTATGAACTTATCTTCTTCTTCTTCTTCCAATTCTCATCGGTTCTGTTTTTACAGAGGCGATAAGGCGTTTTGCAGCCATGAATGTCGATATCAAGAGATGATGCTGGAGGAAGAAGGAGGGGATTGAACGAACAAACGCCACGGGAAACTGCTCGAATCTGATGATCATTAAAACAATGGTGGGATTTGATTTGATTTTCTTGGATTTTCCCGGAAAATGATTCCTTATGCTCTGTTTTCTTGTTCTTTCTGGCTACACTCACGGACCCAAAGGCCGGATGATGTACAATTGGAATTTTGTTTTATGTTTAATTACAGAATTTTATTTTCTAATAATTTCAAAATTTTAACCTTTTTTACCGTGGCAATTTTGGTGTGTTTAATCTCTCTTTTTAATCCACTTTTTTAATAATATATATACGCCATATCCTCGGACTCAATAGTACTAAGTTAGATGACCACGTACTCATGTGCACCTTATTTTAATTTTAATTTTAATTTCTCTCGAGTTTTTACAAGTTGTAATCGTCCTATTTGTATGCTCGTGTTCATAGCGTTTTTTTTCCAATGTGTCTGTGTGGACCTCACTGGTCATTCCAAGCATTTGGGTGCATCCAATGTCACCTGGATTACACCCTGCATGTCTTAGATGATATATATATA TTCTTGTCGTCCTGTTCCTGCACGTCTGCTTTCCTTTTAATCAGTCTTTTGGAGCGCTAAACCCGGGGGATGGATGGATGGATGGATGGATGAATTAACGAAGCTTTGATTCTCTGTTTCTCTCCTTTTTTTTATTCACTTTTCACTAATGGAAGTCGCTCAAAATCTGTCCATGGTGGTTTCCGATCATCTTCACCAGTTCTTGTCTTCTCCGGTGAGTCCCAAGTTTGAATTCCTTACATGGGTAGCTGTTTTTTTTTTTCTTTTTTTCTTACTGGGTTTCGTGTTCTGATTTCAGGGGAATTAGATCTTGAAGTAGAATTAGCAATGGGCGGTGGCGGTGACGGTGGTGGTGGCTGTTTACCTTCTCCGATGAGTAATAACAGGAAATTGAGTTCGTCTTTCTTGTTTAGAAGTTCTTCTTCAAAGGGATTTTCCGAAACAGAGGCTGTAATGAGTCCAACTTCAATTCTCGAACCATTTATGGGTCTGAGAAGTTCGTTTTGGTCGGAATCAAATTCGCCCAGAACGCCATTAACAGAGTCCAAACGGCCGTGGGATTCGAAAGGGATCGGTCTCGGCATTGTCGATGCTCTAACGGAGGAGAATTCCGACCAGAAACCCACAAAATCCGACACCCGAATGGTTCTGTTGGGATCTCAATTAAAGATTCAAATTCCTCCTCTACCGCAGTTCGTTTCTCCGACCGATGAGTCTCCGAGATCGCCGGCGGAATTCGGGATCAAGACAAGGAATCCCCATCTGGGTTCCTTATCCCCTGTTTCATCTCTGTCTCCGGCGAAGAAATCGTCGATCTCCGGCCATGAAACTCCCACTTCGCCTCTGGTTTTCACCGGCTGTCTCTCCGCCGACGAAATCGAACAATCAGAGGACTACACTTGCGTGATCTCTCACGGCCCAAATCCTCGAACTACTCATATATTCGGCGATTGCGTAATTGAAAGCGGCGCCGGCGTATATTCACCGGCGAGAAAAGAAAATGGGTATTTCAGAGATCGAACGAGCTTTTCCTCTGAAAATTTCCTCAGTTTTTGTTACAATTGCAAGAAGAAACTCGAAGAAGGCAAAGATATTTACATTTACAGAGGCGATAAGGCGTTTTGCAGCCATGAATGTCGATATCAAGAGATGATGCTGGAGGAAGAAGGAGGGGATTGAACGAACAAACGCCACGGGAAACTGCTCGAATCTGATGATCATTAAAACAATGGTGGGATTTGATTTGATTTTCTTGGATTTTCCCGGAAAATGATTCCTTATGCTCTGTTTTCTTGTTCTTTCTGGCTACACTCACGGACCCAAAGGCCGGATGATGTACAATTGGAATTTTGTTTTATGTTTAATTACAGAATTTTATTTTCTAATAATTTCAAAATTTTAACCTTTTTTACCGTGGCAATTTTGGTGTGTTTAATCTCTCTTTTTAATCCACTTTTTTAATAATATATATACGCCATATCCTCGGACTCAATAGTACTAAGTTAGATGACCACGTACTCATGTGCACCTTATTTTAATTTTAATTTTAATTTCTCTCGAGTTTTTACAAGTTGTAATCGTCCTATTTGTATGCTCGTGTTCATAGCGTTTTTTTTCCAATGTGTCTGTGTGGACCTCACTGGTCATTCCAAGCATTTGGGTGCATCCAATGTCACCTGGATTACACCCTGCATGTCTTAGATGATATATATATA ATGGGTAGCTGTTTTTTTTTTTCTTTTTTTCTTACTGGGTTTCGTGTTCTGATTTCAGGGGAATTAGATCTTGAAGTAGAATTAGCAATGGGCGGTGGCGGTGACGGTGGTGGTGGCTGTTTACCTTCTCCGATGAGTAATAACAGGAAATTGAGTTCGTCTTTCTTGTTTAGAAGTTCTTCTTCAAAGGGATTTTCCGAAACAGAGGCTGTAATGAGTCCAACTTCAATTCTCGAACCATTTATGGGTCTGAGAAGTTCGTTTTGGTCGGAATCAAATTCGCCCAGAACGCCATTAACAGAGTCCAAACGGCCGTGGGATTCGAAAGGGATCGGTCTCGGCATTGTCGATGCTCTAACGGAGGAGAATTCCGACCAGAAACCCACAAAATCCGACACCCGAATGGTTCTGTTGGGATCTCAATTAAAGATTCAAATTCCTCCTCTACCGCAGTTCGTTTCTCCGACCGATGAGTCTCCGAGATCGCCGGCGGAATTCGGGATCAAGACAAGGAATCCCCATCTGGGTTCCTTATCCCCTGTTTCATCTCTGTCTCCGGCGAAGAAATCGTCGATCTCCGGCCATGAAACTCCCACTTCGCCTCTGGTTTTCACCGGCTGTCTCTCCGCCGACGAAATCGAACAATCAGAGGACTACACTTGCGTGATCTCTCACGGCCCAAATCCTCGAACTACTCATATATTCGGCGATTGCGTAATTGAAAGCGGCGCCGGCGTATATTCACCGGCGAGAAAAGAAAATGGGTATTTCAGAGATCGAACGAGCTTTTCCTCTGAAAATTTCCTCAGTTTTTGTTACAATTGCAAGAAGAAACTCGAAGAAGGCAAAGATATTTACATTTACAGAGGCGATAAGGCGTTTTGCAGCCATGAATGTCGATATCAAGAGATGATGCTGGAGGAAGAAGGAGGGGATTGA MGSCFFFSFFLTGFRVLISGELDLEVELAMGGGGDGGGGCLPSPMSNNRKLSSSFLFRSSSSKGFSETEAVMSPTSILEPFMGLRSSFWSESNSPRTPLTESKRPWDSKGIGLGIVDALTEENSDQKPTKSDTRMVLLGSQLKIQIPPLPQFVSPTDESPRSPAEFGIKTRNPHLGSLSPVSSLSPAKKSSISGHETPTSPLVFTGCLSADEIEQSEDYTCVISHGPNPRTTHIFGDCVIESGAGVYSPARKENGYFRDRTSFSSENFLSFCYNCKKKLEEGKDIYIYRGDKAFCSHECRYQEMMLEEEGGD
BLAST of Carg10030 vs. NCBI nr
Match: XP_023548043.1 (protein MARD1-like isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 549.3 bits (1414), Expect = 8.5e-153 Identity = 302/312 (96.79%), Postives = 306/312 (98.08%), Query Frame = 0
BLAST of Carg10030 vs. NCBI nr
Match: XP_022959391.1 (protein MARD1-like isoform X1 [Cucurbita moschata]) HSP 1 Score: 542.0 bits (1395), Expect = 1.4e-150 Identity = 303/316 (95.89%), Postives = 305/316 (96.52%), Query Frame = 0
BLAST of Carg10030 vs. NCBI nr
Match: XP_023006742.1 (protein MARD1-like isoform X1 [Cucurbita maxima]) HSP 1 Score: 540.4 bits (1391), Expect = 4.0e-150 Identity = 299/319 (93.73%), Postives = 303/319 (94.98%), Query Frame = 0
BLAST of Carg10030 vs. NCBI nr
Match: XP_023006744.1 (protein MARD1-like isoform X2 [Cucurbita maxima]) HSP 1 Score: 516.5 bits (1329), Expect = 6.1e-143 Identity = 252/257 (98.05%), Postives = 255/257 (99.22%), Query Frame = 0
BLAST of Carg10030 vs. NCBI nr
Match: XP_022959392.1 (protein MARD1-like isoform X2 [Cucurbita moschata]) HSP 1 Score: 503.8 bits (1296), Expect = 4.1e-139 Identity = 246/250 (98.40%), Postives = 247/250 (98.80%), Query Frame = 0
BLAST of Carg10030 vs. TAIR10
Match: AT3G22550.1 (Protein of unknown function (DUF581)) HSP 1 Score: 175.6 bits (444), Expect = 4.7e-44 Identity = 106/252 (42.06%), Postives = 147/252 (58.33%), Query Frame = 0
BLAST of Carg10030 vs. TAIR10
Match: AT3G63210.1 (Protein of unknown function (DUF581)) HSP 1 Score: 130.2 bits (326), Expect = 2.2e-30 Identity = 97/263 (36.88%), Postives = 135/263 (51.33%), Query Frame = 0
BLAST of Carg10030 vs. TAIR10
Match: AT5G11460.1 (Protein of unknown function (DUF581)) HSP 1 Score: 120.9 bits (302), Expect = 1.4e-27 Identity = 95/281 (33.81%), Postives = 139/281 (49.47%), Query Frame = 0
BLAST of Carg10030 vs. TAIR10
Match: AT2G25690.1 (Protein of unknown function (DUF581)) HSP 1 Score: 99.4 bits (246), Expect = 4.2e-21 Identity = 48/96 (50.00%), Postives = 64/96 (66.67%), Query Frame = 0
BLAST of Carg10030 vs. TAIR10
Match: AT1G79970.1 (unknown protein) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-13 Identity = 54/169 (31.95%), Postives = 83/169 (49.11%), Query Frame = 0
BLAST of Carg10030 vs. Swiss-Prot
Match: sp|Q8LGS1|MARD1_ARATH (Protein MARD1 OS=Arabidopsis thaliana OX=3702 GN=MARD1 PE=2 SV=2) HSP 1 Score: 130.2 bits (326), Expect = 4.0e-29 Identity = 97/263 (36.88%), Postives = 135/263 (51.33%), Query Frame = 0
BLAST of Carg10030 vs. TrEMBL
Match: tr|A0A1S3BHM4|A0A1S3BHM4_CUCME (protein MARD1-like OS=Cucumis melo OX=3656 GN=LOC103489674 PE=4 SV=1) HSP 1 Score: 453.4 bits (1165), Expect = 4.2e-124 Identity = 229/269 (85.13%), Postives = 238/269 (88.48%), Query Frame = 0
BLAST of Carg10030 vs. TrEMBL
Match: tr|A0A0A0K8W8|A0A0A0K8W8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G234090 PE=4 SV=1) HSP 1 Score: 451.8 bits (1161), Expect = 1.2e-123 Identity = 228/269 (84.76%), Postives = 238/269 (88.48%), Query Frame = 0
BLAST of Carg10030 vs. TrEMBL
Match: tr|A0A2N9EHC8|A0A2N9EHC8_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS2000 PE=4 SV=1) HSP 1 Score: 325.5 bits (833), Expect = 1.3e-85 Identity = 173/265 (65.28%), Postives = 199/265 (75.09%), Query Frame = 0
BLAST of Carg10030 vs. TrEMBL
Match: tr|M5XYZ8|M5XYZ8_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_1G016000 PE=4 SV=1) HSP 1 Score: 319.3 bits (817), Expect = 9.5e-84 Identity = 173/273 (63.37%), Postives = 207/273 (75.82%), Query Frame = 0
BLAST of Carg10030 vs. TrEMBL
Match: tr|A0A2I4FM30|A0A2I4FM30_9ROSI (protein MARD1 OS=Juglans regia OX=51240 GN=LOC109000340 PE=4 SV=1) HSP 1 Score: 311.2 bits (796), Expect = 2.6e-81 Identity = 167/265 (63.02%), Postives = 196/265 (73.96%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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