Carg25089-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGTTTGGTAATGATGATGAGAGGATAATAGTTAGCTCACACACACACTATCTATAAACGCTACACATTGTCTCCCTCTTTCTCCCACACTCACTCTGTTTCTTCTCTTTCCCTTAGCTTTATGCATGCAACCAACTCTTCTAATTAACAACTCTTCCACAACAATGTCTGTAAGTCTCTCTCTCTCTCAAACAACAACTCACCATAATATCTCTATTATCTCATGCATTTCGGTGCGTTTCAGATGATCGAGGTTAGAGTTCCAAATCTCGACTGTGAAGGTTGCGCTTCAAAATTGAGGAAAGCACTCTTCAAACTCAAAGGTACCATTATTATTATATCACTTTTGTTTATTTTTCAATTTTAAGAAGCGTATGTGTAATGGTCCAAGTCCACCGCTAATAGATATTCTCCTCTTTAAACTTTTCTTTTGAACTTACCCCCTCAAGGTTTTTAAAGTGCGCTTGCTAGAGAGAAGTTTCCACACCCTGACAAAGAGTGTTTCGTTCTCCTCTTTTATTGATGTGGCATCTCACCGTCTGATTTCATAACTATTTCTATTTGGTAAGAAATGTTTCTAAGCGGGTTTCAATTAAAAATGTTCCTTTATCAATATGAAGCGAGAAATTTCAAAGAACTTAAAAAAAAAAATATTTGAATTCATACCCATAATTTTACAAAATTTATTTTTAATTTTCAAATCTCTAAATAATAATATCAAATAGTTATCCAAGGAGCCTAAAACAAAGAGAGTGTCCAACCAAGCGGCCATATCTTAGTTCAGCATTGTGAGATCTCTATCTCGGTTGAAAAAGAGAACAAAACATCCTTAATAAGGGTGTAGAGGACCGAGCTGTGATGTCCACATTGATTGGGGAGGAGAACAAATCACCATTTATAAGGGTGTGGAAACCTTCCTCTAACATAAGCGATTTAAAGTTTCGAAGGGAAGCCCGAAAGAAAAAGTCCAAAGAGGACAATATCTACTAGCAGTGGATCTGGGCCGTTACACGAGGGGCCCTATTTTGGTTGGGCACTATGAGATCCCCACATCGGTTGGAGAGGAAAACAAAACACCCATTATAAGGGTGTGAAAACCTTTCTATAGTAAACGTGTTTTAAAAACTTTGAGGAGAAGAACAAAGAACAACGGTTGTAATAAAAAAATTGGTATGAATCGATGAACGTAGGAGTGGAAGAAGTGGAAGTGGAAATAGAGATGCAGAAAATAACAGTAAGAGGGTACGGATTGGAGGAGAGAAAAGTGGTGAAGGCAATAAAGAGAGCAGGAAAAGCAGCAGAGGCATGGCCATTCCCAGGATACTCTTCACACTACGCCTCATTTTACAAGTACCCTTCATACATAGCCACACATTACTACGACGCATACAGCGCCACCACCAACCCTACTGCCACTAATCATCATGCATCGCCCACTTCCCTTCACACTTTCTTCCAGACGCCTTCACTTTACTCTCGCGCTGTCTCCTCCGACCACGCCATTGCCTCCCTTTTCAGTGACGACAATCCCCATGCTTGTTCCATCATGTGA ATGTTTGTAAGAGGGTACGGATTGGAGGAGAGAAAAGTGGTGAAGGCAATAAAGAGAGCAGGAAAAGCAGCAGAGGCATGGCCATTCCCAGGATACTCTTCACACTACGCCTCATTTTACAAGTACCCTTCATACATAGCCACACATTACTACGACGCATACAGCGCCACCACCAACCCTACTGCCACTAATCATCATGCATCGCCCACTTCCCTTCACACTTTCTTCCAGACGCCTTCACTTTACTCTCGCGCTGTCTCCTCCGACCACGCCATTGCCTCCCTTTTCAGTGACGACAATCCCCATGCTTGTTCCATCATGTGA ATGTTTGTAAGAGGGTACGGATTGGAGGAGAGAAAAGTGGTGAAGGCAATAAAGAGAGCAGGAAAAGCAGCAGAGGCATGGCCATTCCCAGGATACTCTTCACACTACGCCTCATTTTACAAGTACCCTTCATACATAGCCACACATTACTACGACGCATACAGCGCCACCACCAACCCTACTGCCACTAATCATCATGCATCGCCCACTTCCCTTCACACTTTCTTCCAGACGCCTTCACTTTACTCTCGCGCTGTCTCCTCCGACCACGCCATTGCCTCCCTTTTCAGTGACGACAATCCCCATGCTTGTTCCATCATGTGA MFVRGYGLEERKVVKAIKRAGKAAEAWPFPGYSSHYASFYKYPSYIATHYYDAYSATTNPTATNHHASPTSLHTFFQTPSLYSRAVSSDHAIASLFSDDNPHACSIM
BLAST of Carg25089-RA vs. NCBI nr
Match: XP_022931790.1 (heavy metal-associated isoprenylated plant protein 31 isoform X1 [Cucurbita moschata]) HSP 1 Score: 212.6 bits (540), Expect = 6.5e-52 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg25089-RA vs. NCBI nr
Match: XP_022931791.1 (heavy metal-associated isoprenylated plant protein 31 isoform X2 [Cucurbita moschata] >XP_023554194.1 heavy metal-associated isoprenylated plant protein 31 isoform X2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 6.5e-52 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg25089-RA vs. NCBI nr
Match: XP_023554193.1 (heavy metal-associated isoprenylated plant protein 31 isoform X1 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 212.6 bits (540), Expect = 6.5e-52 Identity = 105/105 (100.00%), Postives = 105/105 (100.00%), Query Frame = 0
BLAST of Carg25089-RA vs. NCBI nr
Match: XP_022971859.1 (heavy metal-associated isoprenylated plant protein 31 isoform X2 [Cucurbita maxima]) HSP 1 Score: 211.1 bits (536), Expect = 1.9e-51 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Carg25089-RA vs. NCBI nr
Match: XP_022971858.1 (heavy metal-associated isoprenylated plant protein 31 isoform X1 [Cucurbita maxima]) HSP 1 Score: 211.1 bits (536), Expect = 1.9e-51 Identity = 104/105 (99.05%), Postives = 104/105 (99.05%), Query Frame = 0
BLAST of Carg25089-RA vs. TAIR10
Match: AT3G48970.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 115.5 bits (288), Expect = 2.0e-26 Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Carg25089-RA vs. TAIR10
Match: AT3G56891.1 (Heavy metal transport/detoxification superfamily protein ) HSP 1 Score: 51.2 bits (121), Expect = 4.5e-07 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Carg25089-RA vs. Swiss-Prot
Match: sp|Q84K70|HIP31_ARATH (Heavy metal-associated isoprenylated plant protein 31 OS=Arabidopsis thaliana OX=3702 GN=HIPP31 PE=2 SV=1) HSP 1 Score: 115.5 bits (288), Expect = 3.5e-25 Identity = 60/105 (57.14%), Postives = 74/105 (70.48%), Query Frame = 0
BLAST of Carg25089-RA vs. Swiss-Prot
Match: sp|B3H6D0|HIP45_ARATH (Heavy metal-associated isoprenylated plant protein 45 OS=Arabidopsis thaliana OX=3702 GN=HIPP45 PE=3 SV=1) HSP 1 Score: 51.2 bits (121), Expect = 8.2e-06 Identity = 39/118 (33.05%), Postives = 60/118 (50.85%), Query Frame = 0
BLAST of Carg25089-RA vs. TrEMBL
Match: tr|A0A0A0LHJ7|A0A0A0LHJ7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G914050 PE=4 SV=1) HSP 1 Score: 148.7 bits (374), Expect = 7.6e-33 Identity = 82/130 (63.08%), Postives = 84/130 (64.62%), Query Frame = 0
BLAST of Carg25089-RA vs. TrEMBL
Match: tr|M5X7W4|M5X7W4_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_ppa024290mg PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.9e-32 Identity = 76/107 (71.03%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg25089-RA vs. TrEMBL
Match: tr|A0A251QNB9|A0A251QNB9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_2G294700 PE=4 SV=1) HSP 1 Score: 146.0 bits (367), Expect = 4.9e-32 Identity = 76/107 (71.03%), Postives = 83/107 (77.57%), Query Frame = 0
BLAST of Carg25089-RA vs. TrEMBL
Match: tr|A0A1S3CQ83|A0A1S3CQ83_CUCME (heavy metal-associated isoprenylated plant protein 20 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103503458 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.2e-31 Identity = 81/137 (59.12%), Postives = 84/137 (61.31%), Query Frame = 0
BLAST of Carg25089-RA vs. TrEMBL
Match: tr|A0A1S3CRB2|A0A1S3CRB2_CUCME (heavy metal-associated isoprenylated plant protein 20 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103503458 PE=4 SV=1) HSP 1 Score: 143.3 bits (360), Expect = 3.2e-31 Identity = 81/137 (59.12%), Postives = 84/137 (61.31%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following exon feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following polypeptide feature(s) derives from this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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