Carg25086 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CTTCTCTTCATTTCTTCAATTTCTTCGTCTCTCTACCCCTCTTTTTCTCTCTTATCCGGCGACCGATCTTCCTCCGGTCAATTTTTTGCCGGCAGGTCCTCTCATCGCATCGATCTCTTCTCAATTACTTAACTCCGCTATCTTATTAGCCATGAATCCGGAATAGTAAGCTCGATTTTTTCTTCTTCTTGTTTTTTGATTCAATTTGTCGATTGGAAGCCCTTGTTTTGTTGTCGTTTTTTGCTGAATTGGGTTAGATCTGGTCGATGAGGAAGATGGAACTTCTTTTAGAAATATGTTTTGTGTTGGATGGTTTAGCTAATTGGGGAATTTTCGATGGTGGTTCTGTTTTTTATGATTTGGTTGAAATATAGGTGATCGATTCGAGATCTCAATTTATCTACCGCTTGTGAAAGTGACCGTTTGAATTTCTTGTTTCTTCTCGAAATGAAGGTGTTTGATTGTCAATTTGGTTGGCGATTTTGATAATCAACTTGTAATTTGTTTGGAGTTATTTCGGTAATTTCTTAAATTTAATCGTTTGGTTATATGTAATCTTTGAATCCTCGAGGAATTTATTCCTCTCTCGCTGTAGGAGTTGTGATATTAAGTAGTAGGGTCTTTTTAACAGTGGCGAATTTGGTGCAATTTTTTTATCCGTTCTTGTATTTGCAGCGACTATTTGTTTAAGCTTCTGCTTATCGGAGACTCGGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGTAAGTTGTCTCTACAAAAACTTTCTTCCAACTGTTTCTTCTTATTTTCTGTTTCCTGTTGAGTTGGTAGCTACTGCGTTAGGTAATACATATGGCTTTGCTGGACGAAATTCGCAACAAAACAATCAAAACGCTGTGTTCTTTGTTGGGTCCCAGTAGTTAGCACCTAATCCATTTGTTTCCTCCCCTTTTTCCGTTGTTCCTTTCCATGCAGGACGATGTATATATAAGTTATCGTCACCGAAAGATCTCCTAAACAATTGCTTTCTGTTATCACAACTAAATAAGTTGTTCACAGTGATTAATTATCTTTAGATTTTATAGAAATCCTCGCTTTATGTAATAGTGACTCCCATGACTTCTGCATTGGTTGAGAGTTTCGAGTTGCTCACGATTGACATTTATTGTGTTAGTTAGAAGGTAGTTTGTTGATTAGGTATATTATATATTCTCTTGTTCCTTAATTAATTCCTTCTTTTTTTTCAAATCAGGATGACTCATATCTCGATAGCTACATTAGCACCATTGGAGTTGACTTTGTAAGCTTCTATCACATATTTGGTCTTCTATTCTGATAATTACTACATGATTTTTTCAGCTCTAATACTTGAAATAAATTATTACTTGTAGAAAATCCGTACTGTGGAACAGGATGGAAAGACCATTAAACTTCAAATTGTAAGTTTGAATTTTTCAATTGTTCTTGCTTTAATCGAAGCTTAGAGGACTATTTACTTGAGTGACTGTTTTATTTGTTCAAAAATCCTTTCTAGTCTGTAATTATGCTGTTCTTCTGTTGGTAAAATCAAATTTAACCGTAGATCTTTAGGAGGGGAGAAAGAAAGAGAGTGAGAGTGTAATGACCCAGATCCACTGCTAGCAGATATTGTCCCATTTGGGCTTTCCCTTTCGGGCTTCCCCTCAAGGCTTTAAAACGCGTCTGCTAGGGGAAGGTTTCCACCCTTATAAATGGTGGTTTGTTCTCCTCTCCAACCAAAATGTGGGACATCACAGTCCACCCCCCTTCAGGGCCTAGCGTCCTCGTTGGCACTCTTTCCTTCGATCGATGTGGAACCGCCCCCAAATGCTCCCCCTTTGGAGCCCAGCGTCCTTACTGGCACACCACCTCGTGTCTACCCCCTTCGGGGAACAGCAAGAAGGCTGGCACATCGTCCGGTGTCTGGCTCTGATGCCATTAGTAACAACCCATATCCATCACTAGCAGATATTGTCCTCTTTGGGCTTTCCCTTTTGGGCTTCTCCTCAAGGCTTTGAAACGCGTCTGCTAAGTGAACGTTTCCACACCCTTATAAATGGTGGTTTGTTCTCCTCCCCAACCAATGTGGACATCACAGAGAGGGAGAGAGAAGAGGAGTGGGGATGCATATGAATACTGCTTAAGAAGATTTCAATGCTGTTTTTTTGGTCTTTCCTGTTAATTGGTAATTTTTACCCTGAACTGTAGTGGGACACTGCCGGTCAAGAACGTTTTAGAACGATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATCGTAATTGCTACACTCTTCATTTTTCAGTTTCTTCTCCTGCCTTTTTTCATCTTCTTAAAGTGAAGTCTGTTTGCATATAATGTGCTGCCATGTAGGTCGTGTATGACGTTACAGATCAGGATAGCTTCAATAATGTTAAGCAATGGTTGAACGAAATAGACCGATATGCTAGTGAAAATGTGAACAAGCTTCTGGTTGGTAATAAATGTGATCTCACTGCAAATAAGGTCGTCTCCTATGAGACAGCGAAGGTAGTAATTTTACTTGGGCGTCTTTCATAAAAGTATGAATTTGGATCTTGAATATGAAAATCAAGACTAAAATTCGATTGTGACATCAATTATTTTCTGAAGGCCTTTGCGGATGAAATTGGAATTCCATTCATGGAAACAAGTGCTAAAAGCGCGACGAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGTACGAACACTGGCAACAGAGACAGCCTACTCGCTTACCCTTTTCATTTTTTCTGTTTTCGTTTTCGTTTTCTTCAATTATTATTAGAATATTCATGAGTGTCTTAACTAGTTTAAACGTAATTATGCATACCCACGATGCTTTTGACCTATTCCTTCTAAGCCTTTTTAATTTTTCATGGGCTTCTATGATCATTAGTCTATCCCAAGCTGATTAGTTCTCGAGCTTACGAAGTTAATCCAAGCTTGGAACTTGAGCTGAACCTACCTTTTTAGCACTATGATCTCTTACTAGTTAGTTATCACGGAGAGGTAGGAAATGGGAGTTGTTAACCACCCCTAAAGGCTCCTAACGACTTCTAAGTTCTACCTTAATTCTTTACTCCACCGGGAGTAGCTCCATTCCTGAGACACGATGGCACAACGCGTTCCATCTATACAAAGCAGCAACCACCCATCTTTACTTGATTTCATTGTTTAGGGGTTCATTTTTTGTAGGATGGCGACACAGCCGATGAACAATGCAAGGCCACCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAAACTGGTTGCTGCTCTTCTTAAAGATGAATGGCTCTTATTGAATGGTTGACAGATGGTGATGGTGATGTTTATGTATGGACGGTGACATGTAAGACTAGTTGTCTCTCTCTCTCTCTCTCTCTATGCTTTTCGTATAAAAAGATTCGTCGGTCGTGAAATGATTTGCCTTTGCCTTTTATTTTCTCGTCTTTTGAAGTCGAACTATGTTAACACCTCCATTCTTTCGAATATATTTGTTTCTGGATCAAACATTATTCAGGTGTAAAATTTAGATATCAATGAACAGTAGTAGTATTTGCTTC CTTCTCTTCATTTCTTCAATTTCTTCGTCTCTCTACCCCTCTTTTTCTCTCTTATCCGGCGACCGATCTTCCTCCGGTCAATTTTTTGCCGGCAGGTCCTCTCATCGCATCGATCTCTTCTCAATTACTTAACTCCGCTATCTTATTAGCCATGAATCCGGAATAGTGTTTGATTGTCAATTTGGTTGGCGATTTTGATAATCAACTTGTAATTTGTTTGGAGTTATTTCGCGACTATTTGTTTAAGCTTCTGCTTATCGGAGACTCGGGAGTTGGAAAATCTTGTCTTCTACTGAGGTTTGCTGATGACTCATATCTCGATAGCTACATTAGCACCATTGGAGTTGACTTTAAAATCCGTACTGTGGAACAGGATGGAAAGACCATTAAACTTCAAATTTGGGACACTGCCGGTCAAGAACGTTTTAGAACGATTACTAGCAGCTACTACCGTGGAGCTCATGGAATAATCGTCGTGTATGACGTTACAGATCAGGATAGCTTCAATAATGTTAAGCAATGGTTGAACGAAATAGACCGATATGCTAGTGAAAATGTGAACAAGCTTCTGGTTGGTAATAAATGTGATCTCACTGCAAATAAGGTCGTCTCCTATGAGACAGCGAAGGCCTTTGCGGATGAAATTGGAATTCCATTCATGGAAACAAGTGCTAAAAGCGCGACGAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCGACACAGCCGATGAACAATGCAAGGCCACCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAAACTGGTTGCTGCTCTTCTTAAAGATGAATGGCTCTTATTGAATGGTTGACAGATGGTGATGGTGATGTTTATGTATGGACGGTGACATGTAAGACTAGTTGTCTCTCTCTCTCTCTCTCTCTATGCTTTTCGTATAAAAAGATTCGTCGGTCGTGAAATGATTTGCCTTTGCCTTTTATTTTCTCGTCTTTTGAAGTCGAACTATGTTAACACCTCCATTCTTTCGAATATATTTGTTTCTGGATCAAACATTATTCAGGTGTAAAATTTAGATATCAATGAACAGTAGTAGTATTTGCTTC ATGGAAACAAGTGCTAAAAGCGCGACGAATGTGGAAGAGGCTTTCATGGCCATGGCTGCTGAAATAAAGAACAGGATGGCGACACAGCCGATGAACAATGCAAGGCCACCGACAGTGAACATTCGAGGACAACCTGTGAATCAGAAAACTGGTTGCTGCTCTTCTTAA METSAKSATNVEEAFMAMAAEIKNRMATQPMNNARPPTVNIRGQPVNQKTGCCSS
BLAST of Carg25086 vs. NCBI nr
Match: XP_022931789.1 (ras-related protein RABD2c [Cucurbita moschata]) HSP 1 Score: 109.0 bits (271), Expect = 5.2e-21 Identity = 55/55 (100.00%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. NCBI nr
Match: XP_023554189.1 (GTP-binding protein YPTM2 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 107.8 bits (268), Expect = 1.2e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. NCBI nr
Match: XP_004148356.1 (PREDICTED: ras-related protein RABD2c [Cucumis sativus] >XP_008465881.1 PREDICTED: ras-related protein RABD2c [Cucumis melo] >KGN60467.1 hypothetical protein Csa_3G913980 [Cucumis sativus]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. NCBI nr
Match: XP_022971849.1 (ras-related protein RABD2c-like [Cucurbita maxima]) HSP 1 Score: 107.5 bits (267), Expect = 1.5e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. NCBI nr
Match: XP_022159480.1 (ras-related protein RABD2c [Momordica charantia]) HSP 1 Score: 107.1 bits (266), Expect = 2.0e-20 Identity = 54/55 (98.18%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Carg25086 vs. TAIR10
Match: AT5G47200.1 (RAB GTPase homolog 1A) HSP 1 Score: 85.5 bits (210), Expect = 1.1e-17 Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg25086 vs. TAIR10
Match: AT4G17530.1 (RAB GTPase homolog 1C) HSP 1 Score: 84.3 bits (207), Expect = 2.5e-17 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg25086 vs. TAIR10
Match: AT1G02130.1 (RAS 5) HSP 1 Score: 84.0 bits (206), Expect = 3.2e-17 Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of Carg25086 vs. TAIR10
Match: AT3G11730.1 (Ras-related small GTP-binding family protein) HSP 1 Score: 49.7 bits (117), Expect = 6.8e-07 Identity = 26/55 (47.27%), Postives = 37/55 (67.27%), Query Frame = 0
BLAST of Carg25086 vs. Swiss-Prot
Match: sp|Q9FPJ4|RAD2B_ARATH (Ras-related protein RABD2b OS=Arabidopsis thaliana OX=3702 GN=RABD2B PE=2 SV=1) HSP 1 Score: 85.5 bits (210), Expect = 2.0e-16 Identity = 42/55 (76.36%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg25086 vs. Swiss-Prot
Match: sp|Q9SEH3|RAD2C_ARATH (Ras-related protein RABD2c OS=Arabidopsis thaliana OX=3702 GN=RABD2C PE=1 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 4.5e-16 Identity = 41/55 (74.55%), Postives = 48/55 (87.27%), Query Frame = 0
BLAST of Carg25086 vs. Swiss-Prot
Match: sp|P28188|RAD2A_ARATH (Ras-related protein RABD2a OS=Arabidopsis thaliana OX=3702 GN=RABD2A PE=1 SV=3) HSP 1 Score: 84.0 bits (206), Expect = 5.9e-16 Identity = 44/56 (78.57%), Postives = 48/56 (85.71%), Query Frame = 0
BLAST of Carg25086 vs. Swiss-Prot
Match: sp|Q05737|YPTM2_MAIZE (GTP-binding protein YPTM2 OS=Zea mays OX=4577 GN=YPTM2 PE=2 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.7e-15 Identity = 44/56 (78.57%), Postives = 49/56 (87.50%), Query Frame = 0
BLAST of Carg25086 vs. Swiss-Prot
Match: sp|P40392|RIC1_ORYSJ (Ras-related protein RIC1 OS=Oryza sativa subsp. japonica OX=39947 GN=RIC1 PE=2 SV=2) HSP 1 Score: 73.2 bits (178), Expect = 1.0e-12 Identity = 38/55 (69.09%), Postives = 45/55 (81.82%), Query Frame = 0
BLAST of Carg25086 vs. TrEMBL
Match: tr|A0A1S3CQ93|A0A1S3CQ93_CUCME (ras-related protein RABD2c OS=Cucumis melo OX=3656 GN=LOC103503466 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.0e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. TrEMBL
Match: tr|A0A0A0LID7|A0A0A0LID7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G913980 PE=4 SV=1) HSP 1 Score: 107.5 bits (267), Expect = 1.0e-20 Identity = 54/55 (98.18%), Postives = 55/55 (100.00%), Query Frame = 0
BLAST of Carg25086 vs. TrEMBL
Match: tr|A0A1S3BJX6|A0A1S3BJX6_CUCME (GTP-binding protein YPTM2-like OS=Cucumis melo OX=3656 GN=LOC103490855 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Carg25086 vs. TrEMBL
Match: tr|A0A0A0L5E9|A0A0A0L5E9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G017260 PE=4 SV=1) HSP 1 Score: 104.0 bits (258), Expect = 1.1e-19 Identity = 52/55 (94.55%), Postives = 54/55 (98.18%), Query Frame = 0
BLAST of Carg25086 vs. TrEMBL
Match: tr|A0A2N9G4I7|A0A2N9G4I7_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS21906 PE=4 SV=1) HSP 1 Score: 102.4 bits (254), Expect = 3.2e-19 Identity = 51/55 (92.73%), Postives = 54/55 (98.18%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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