Carg21889 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGTGTGAGTTGAATGTAACGGTTGAATTAAAGGTTACTCACATCTGAATTATTAAGTTTTCTGACTCTTTCTTACATGATTTGCAGGTCTACTACAAGTTCAACAGCATTTCAATGCTTAGGGAGCCTATAATGTTGATTTTTGGATTCTTTGTCCTTTTTGTCTCATGCATCATTTATATGCATTCGGACATGTCAATTTCAAAGTCTTCGCCTTCTTATTTAGCTAAACTACAGTGGGATGAGGTAAAGTAGATGGTATTCTATCGTATTATTCCGAGTATGTAGATGGTTTAGGCAGGGCCATAGTAGAAGATGCCTTACATTTCTGACACTGGTGGATTCTCACTGCCTTATTGCTTTGTCCATCTCATTTCAGGTGCAAACTGTGATTCAGCAAGTTCAGAATATTATCAATAGATGCTTAACCATACACGATAAATTGGATGCGTCACTGCGTGATCTTTCTCGAACTGGTGATGTCCAAGCTTGTAAAGCAGCTCGGAAAGCAGCCGATGCTTCATTGAAAGAGCTTTCAAAAGAGTTGAAGTCTTTGCTTTCATTCTTGCAGTCGGCCCAGCAGGCCACCCAGATATTGCCTAAGGTTCAATTGCTTCTAGTTTGTTCGTATAGATTTAACTGTGAATATCATCATGCATTGACAAACAAAATATAGTGAACTCAAAAAACAAAACAAAAAAAGGACAGAAAAAGTCAAACAAAATATAGTGTGATATGTAAAAGGAGATGTCCTGTCCCATGTTGGCTCAAACACAAACTGATTAGAGAAGTGGGGATGCTGGTTGTCATGAACAAACTATGTTAAGTATCAAGTGGTGCTGCCTGTGCAGGTGGAAGAGCTGGTGGCCAAGGAGAGAGATCTGCAGGAGAGGTTGGTTGTGAAACACATGACGGTGGTGGACTGCTACGAGAAGAAGTTCGGTGGACGTGAAATCGAAAACAGGGTTGCTTCACAGCAGCAAAGAATTACAACTTTGAGGCAGGAAGTAGATGATCTTCTCGAGTTCATTGATGAAATATAATGAAATATGCTGACAGCGTTGGCATATTTATCTTCATGACCACATAACGCTCTAAGATTAGCCAATGTCTGCTTGGGGTTCAGAATTTTGTCGTGCTTTATTTAGAGATTTTGGTTACCTTCACCTTTAATCTGATGACCTGCAAGGTTTTGAATTATGATCCAATTAGAAAGTATAAGCCTGGAATAGAGCGGATACACATAATGGCATATATTATAATCCTTCCTCTTTATCTACATCATGCTTGACTTGTTGTCAAGATAATTTATCCTTGCTTTTAGGGTTTTGGTAAGGGTGTCTCTCAATGGTTCTTGGATCTTCAATGTATTTTCTCACGAGTGAGATGATAATTCCTTCAATATGTTTAGTTTGGCCGTATAACACTAAAGTAGATGCAATGTGAAATGCAGTTTCATTGTCAGTTTAGTTTGGCATTTTAACATTAAAATTTACATTCATGACGAATCCTATCGTAGTTAAAGGTTGATTATATCCTATCGTAGTTAAAGGTTGATTATATGCATAGTTCTATATTCTAACTTCATACTTCAGGACAGACTCTTGCGGCTCTTGGAGTCGGCATAACTCTATATTCTAACTTCATACTTCAGGACAGACTCTTGAGGCTCATAGAGTCGGCCTCGTACCACAAGACCACATGGAGTTGCTCTAGATGAGATTTCGG ATGGTCTACTACAAGTTCAACAGCATTTCAATGCTTAGGGAGCCTATAATGTTGATTTTTGGATTCTTTGTCCTTTTTGTCTCATGCATCATTTATATGCATTCGGACATGTCAATTTCAAAGTCTTCGCCTTCTTATTTAGCTAAACTACAGTGGGATGAGGTGCAAACTGTGATTCAGCAAGTTCAGAATATTATCAATAGATGCTTAACCATACACGATAAATTGGATGCGTCACTGCGTGATCTTTCTCGAACTGGTGATGTCCAAGCTTGTAAAGCAGCTCGGAAAGCAGCCGATGCTTCATTGAAAGAGCTTTCAAAAGAGTTGAAGTCTTTGCTTTCATTCTTGCAGTCGGCCCAGCAGGCCACCCAGATATTGCCTAAGGTGGAAGAGCTGGTGGCCAAGGAGAGAGATCTGCAGGAGAGGTTGGTTGTGAAACACATGACGGTGGTGGACTGCTACGAGAAGAAGTTCGGTGGACGTGAAATCGAAAACAGGGTTGCTTCACAGCAGCAAAGAATTACAACTTTGAGGCAGGAAGTAGATGATCTTCTCGAGTTCATTGATGAAATATAATGAAATATGCTGACAGCGTTGGCATATTTATCTTCATGACCACATAACGCTCTAAGATTAGCCAATGTCTGCTTGGGGTTCAGAATTTTGTCGTGCTTTATTTAGAGATTTTGGTTACCTTCACCTTTAATCTGATGACCTGCAAGGTTTTGAATTATGATCCAATTAGAAAGTATAAGCCTGGAATAGAGCGGATACACATAATGGCATATATTATAATCCTTCCTCTTTATCTACATCATGCTTGACTTGTTGTCAAGATAATTTATCCTTGCTTTTAGGGTTTTGGTAAGGGTGTCTCTCAATGGTTCTTGGATCTTCAATGTATTTTCTCACGAGTGAGATGATAATTCCTTCAATATGTTTAGTTTGGCCGTATAACACTAAAGTAGATGCAATGTGAAATGCAGTTTCATTGTCAGTTTAGTTTGGCATTTTAACATTAAAATTTACATTCATGACGAATCCTATCGTAGTTAAAGGTTGATTATATGCATAGTTCTATATTCTAACTTCATACTTCAGGACAGACTCTTGCGGCTCTTGGAGTCGGCATAACTCTATATTCTAACTTCATACTTCAGGACAGACTCTTGAGGCTCATAGAGTCGGCCTCGTACCACAAGACCACATGGAGTTGCTCTAGATGAGATTTCGG ATGGTCTACTACAAGTTCAACAGCATTTCAATGCTTAGGGAGCCTATAATGTTGATTTTTGGATTCTTTGTCCTTTTTGTCTCATGCATCATTTATATGCATTCGGACATGTCAATTTCAAAGTCTTCGCCTTCTTATTTAGCTAAACTACAGTGGGATGAGGTGCAAACTGTGATTCAGCAAGTTCAGAATATTATCAATAGATGCTTAACCATACACGATAAATTGGATGCGTCACTGCGTGATCTTTCTCGAACTGGTGATGTCCAAGCTTGTAAAGCAGCTCGGAAAGCAGCCGATGCTTCATTGAAAGAGCTTTCAAAAGAGTTGAAGTCTTTGCTTTCATTCTTGCAGTCGGCCCAGCAGGCCACCCAGATATTGCCTAAGGTGGAAGAGCTGGTGGCCAAGGAGAGAGATCTGCAGGAGAGGTTGGTTGTGAAACACATGACGGTGGTGGACTGCTACGAGAAGAAGTTCGGTGGACGTGAAATCGAAAACAGGGTTGCTTCACAGCAGCAAAGAATTACAACTTTGAGGCAGGAAGTAGATGATCTTCTCGAGTTCATTGATGAAATATAA MVYYKFNSISMLREPIMLIFGFFVLFVSCIIYMHSDMSISKSSPSYLAKLQWDEVQTVIQQVQNIINRCLTIHDKLDASLRDLSRTGDVQACKAARKAADASLKELSKELKSLLSFLQSAQQATQILPKVEELVAKERDLQERLVVKHMTVVDCYEKKFGGREIENRVASQQQRITTLRQEVDDLLEFIDEI
BLAST of Carg21889 vs. NCBI nr
Match: XP_023522430.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like, partial [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.8 bits (782), Expect = 1.0e-79 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg21889 vs. NCBI nr
Match: XP_023546058.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 305.8 bits (782), Expect = 1.0e-79 Identity = 191/191 (100.00%), Postives = 191/191 (100.00%), Query Frame = 0
BLAST of Carg21889 vs. NCBI nr
Match: XP_022999654.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like [Cucurbita maxima]) HSP 1 Score: 301.6 bits (771), Expect = 1.9e-78 Identity = 189/191 (98.95%), Postives = 189/191 (98.95%), Query Frame = 0
BLAST of Carg21889 vs. NCBI nr
Match: XP_022946775.1 (dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A-like [Cucurbita moschata]) HSP 1 Score: 298.9 bits (764), Expect = 1.2e-77 Identity = 188/191 (98.43%), Postives = 188/191 (98.43%), Query Frame = 0
BLAST of Carg21889 vs. NCBI nr
Match: XP_008464825.1 (PREDICTED: dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A [Cucumis melo]) HSP 1 Score: 288.5 bits (737), Expect = 1.7e-74 Identity = 152/191 (79.58%), Postives = 159/191 (83.25%), Query Frame = 0
BLAST of Carg21889 vs. TAIR10
Match: AT1G76400.1 (Ribophorin I) HSP 1 Score: 228.0 bits (580), Expect = 4.9e-60 Identity = 116/191 (60.73%), Postives = 143/191 (74.87%), Query Frame = 0
BLAST of Carg21889 vs. Swiss-Prot
Match: sp|Q9SFX3|OST1A_ARATH (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Arabidopsis thaliana OX=3702 GN=OST1A PE=2 SV=1) HSP 1 Score: 228.0 bits (580), Expect = 8.8e-59 Identity = 116/191 (60.73%), Postives = 143/191 (74.87%), Query Frame = 0
BLAST of Carg21889 vs. Swiss-Prot
Match: sp|Q0DJC5|OST1A_ORYSJ (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1A OS=Oryza sativa subsp. japonica OX=39947 GN=OST1A PE=2 SV=1) HSP 1 Score: 222.6 bits (566), Expect = 3.7e-57 Identity = 110/191 (57.59%), Postives = 145/191 (75.92%), Query Frame = 0
BLAST of Carg21889 vs. Swiss-Prot
Match: sp|E2RQ08|RPN1_CANLF (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Canis lupus familiaris OX=9615 GN=RPN1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06 Identity = 28/97 (28.87%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Carg21889 vs. Swiss-Prot
Match: sp|Q91YQ5|RPN1_MOUSE (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Mus musculus OX=10090 GN=Rpn1 PE=1 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06 Identity = 28/97 (28.87%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Carg21889 vs. Swiss-Prot
Match: sp|P07153|RPN1_RAT (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Rattus norvegicus OX=10116 GN=Rpn1 PE=2 SV=1) HSP 1 Score: 53.9 bits (128), Expect = 2.3e-06 Identity = 28/97 (28.87%), Postives = 59/97 (60.82%), Query Frame = 0
BLAST of Carg21889 vs. TrEMBL
Match: tr|A0A1S3CNZ5|A0A1S3CNZ5_CUCME (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Cucumis melo OX=3656 GN=LOC103502612 PE=3 SV=1) HSP 1 Score: 288.5 bits (737), Expect = 1.1e-74 Identity = 152/191 (79.58%), Postives = 159/191 (83.25%), Query Frame = 0
BLAST of Carg21889 vs. TrEMBL
Match: tr|A0A0A0KDF6|A0A0A0KDF6_CUCSA (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Cucumis sativus OX=3659 GN=Csa_6G355420 PE=3 SV=1) HSP 1 Score: 287.7 bits (735), Expect = 1.9e-74 Identity = 152/191 (79.58%), Postives = 158/191 (82.72%), Query Frame = 0
BLAST of Carg21889 vs. TrEMBL
Match: tr|A0A059BQX1|A0A059BQX1_EUCGR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F01802 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.5e-66 Identity = 133/191 (69.63%), Postives = 153/191 (80.10%), Query Frame = 0
BLAST of Carg21889 vs. TrEMBL
Match: tr|A0A059BQG4|A0A059BQG4_EUCGR (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Eucalyptus grandis OX=71139 GN=EUGRSUZ_F01802 PE=3 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.5e-66 Identity = 133/191 (69.63%), Postives = 153/191 (80.10%), Query Frame = 0
BLAST of Carg21889 vs. TrEMBL
Match: tr|A0A2N9FNI2|A0A2N9FNI2_FAGSY (Dolichyl-diphosphooligosaccharide--protein glycosyltransferase subunit 1 OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS20178 PE=3 SV=1) HSP 1 Score: 259.2 bits (661), Expect = 7.2e-66 Identity = 140/191 (73.30%), Postives = 150/191 (78.53%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |