Carg17985 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGCAGGTCTTTAAGTTGCCTTCCCCACTGTTCCCCATATCCCAATCCTTCTTAAATCCTTGTTTCGTTTTTCAATTTCCTCTTCAGATCATTGCTTGTATGCCTCTCAAATCCTCCACTTTTTCTGCTCTTCAATCCACCAACGCCCTCATGAATAATCCTTCTCTGTTTTTGTGATTTTCTTTTCGTTTTCTGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGGTTTCTTTTATTTCTCTGCTTTTTCTTCGCTCTGAACTTGAAATTGTTTGTCGATCAACTCTTCTTATTGCTCTAATCTTGCTTTCTGTCTTTCCGATTCTGCTGGGTTTTGTTGGATCTTGTTTGTCTCTGTTGTTGCGGGATTTTGTCGTTCTTATTCGCTTTTGTTATCGATTCTTATATTTGTTTGTTTTGTGAGAATCTTGTTGCTTCGAATTGGGGGTTTTCCTTTTTCTGATTGAGATTTGTTTATCTTTGTGGTTCTGTTCAAGAACTGAAGAGATTTTCAGAACTTTTTGATTTTCCCCTTCGTAGTTCTTCTGAATGCTCTGATTGCTTGCTATGTCTTTTTTTACATAGTTTTGCATTTGATTCAGCTATTTCTTCACTCTAGGGAAGTCATTTTTGTGTTCTGCTAGCTTACGTTACTCAACTGAAGTTCAAGAACTTTGTCCAAATTTCTCCCACTTGAGTGCACAAGTAAAATAAACATCCTCTATGAACTTCGATTTTGCTTTCAACTAAACTACCATCGAACCCAAAAGCTTAAGTTTCTAGGTTAGAGTATATGGAGGATTCGAACCTTAAAACTTTTCGAAGGTAAGTAGTGTCTTGACCGATCGAGTTATACTCATATCGACTCGGTTAGAACATATTTAACCTATAGTTGGGAGGACATGGTATTGTAGGGAATTAAACTTAAGAGTGCACAACATTGAACCTGAAATCTTTATGTCTTGACTGATCGAGCTATACGCATATCGACTCGGTTAGAACATGTTTAACCTACAATTGGGAGGACATGGTATTGTAGGGATTTAAACTTAAGAGTGCACAACATTGAAGCTGAAATCTTAAGTTCATAGGTTAGAGTATATTTGATCTTGTATAGTACCCTTAATGCTCATCTACATGTCAACTTCGATATTAATTTGAATTTCGAAGCCTAGCATGAGACTCATACTCTGATACTATGTTAAATCATTGTGTATATATATTGTTTCATGTTTACAGTTCATGATTTATGACAGAAGAACTTATGATGAAGCCTCATAAATTTCATCTCAGTTCTAGAGAATTCAAGCATCTTTATCTTTGTGTTTATAAAGATGTGGTTTTGTTGATATATAACTAACATCTGGTTACGATGTTCGAGCTTGTTGCGTTTATTTACTAAATGAGTGTCGTGTCGTAAGAGAATTGAAATTGTTTCCTATGTAAATGTTTTATGCTTGGCAGTGGCCATCTGTTGCGTGATTTTTTTCGTTCTTGGAGTTCTTAAAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA ATGGGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA ATGGGCAGATTCACTCACTGTAATGCCTTCTTTCCATTGATTCGTATGGCCTTCGTTTCTTATCAGAGGATGGGTAGAGGTCGAGGAAAGGGGAGGAAGTTGACCGTTACAAATCATGACGATGCTGGAAGTGGTGAGGAAGAGAAGATTCCTGCGCAAAAGCGAAGGGGAAGGCCACAAAAGCCATTGAAGGACGAGATCGACGAGGAAGAAGCTGAAAAGATAGAAGACGACGACATCGAGAACGTGAAAGGCAATGAAATTGTGAGCAAGGAGATGAAAAGCAGCAGCAGCCCAGCTGCAGCAACAGAGAATGGGAAAAGGAGGAGAAGAAGCTCACAAGTGAAAGAAAAGCTCGATCCAGTCAAAGACGAAAATGGAGACGGAACACGATCAAGCACTGATGAATCAACCAGATCGAATGGATTTCGCCACAACGGAAGCAGGAGAAAAAGCAAGCCCCGTCGAGCTGCCGAAGCAGGCGTTAACTGCAAGTAA MGRFTHCNAFFPLIRMAFVSYQRMGRGRGKGRKLTVTNHDDAGSGEEEKIPAQKRRGRPQKPLKDEIDEEEAEKIEDDDIENVKGNEIVSKEMKSSSSPAAATENGKRRRRSSQVKEKLDPVKDENGDGTRSSTDESTRSNGFRHNGSRRKSKPRRAAEAGVNCK
BLAST of Carg17985 vs. NCBI nr
Match: XP_023530954.1 (uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo] >XP_023530955.1 uncharacterized protein LOC111793344 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 207.6 bits (527), Expect = 3.2e-50 Identity = 136/142 (95.77%), Postives = 136/142 (95.77%), Query Frame = 0
BLAST of Carg17985 vs. NCBI nr
Match: XP_022968481.1 (uncharacterized protein LOC111467706 [Cucurbita maxima] >XP_022968490.1 uncharacterized protein LOC111467706 [Cucurbita maxima]) HSP 1 Score: 204.1 bits (518), Expect = 3.6e-49 Identity = 134/142 (94.37%), Postives = 135/142 (95.07%), Query Frame = 0
BLAST of Carg17985 vs. NCBI nr
Match: XP_023516906.1 (uncharacterized protein LOC111780671 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 193.4 bits (490), Expect = 6.3e-46 Identity = 110/142 (77.46%), Postives = 112/142 (78.87%), Query Frame = 0
BLAST of Carg17985 vs. NCBI nr
Match: XP_022927916.1 (uncharacterized protein LOC111434674 [Cucurbita moschata] >XP_022927925.1 uncharacterized protein LOC111434674 [Cucurbita moschata]) HSP 1 Score: 191.4 bits (485), Expect = 2.4e-45 Identity = 129/142 (90.85%), Postives = 129/142 (90.85%), Query Frame = 0
BLAST of Carg17985 vs. NCBI nr
Match: XP_022960708.1 (uncharacterized protein LOC111461426 [Cucurbita moschata]) HSP 1 Score: 190.3 bits (482), Expect = 5.3e-45 Identity = 108/142 (76.06%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Carg17985 vs. TAIR10
Match: AT2G42190.1 (unknown protein) HSP 1 Score: 55.8 bits (133), Expect = 2.8e-08 Identity = 71/143 (49.65%), Postives = 80/143 (55.94%), Query Frame = 0
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A1S3BRW6|A0A1S3BRW6_CUCME (uncharacterized protein LOC103492511 OS=Cucumis melo OX=3656 GN=LOC103492511 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40 Identity = 101/142 (71.13%), Postives = 105/142 (73.94%), Query Frame = 0
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A0A0LXE8|A0A0A0LXE8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G605770 PE=4 SV=1) HSP 1 Score: 173.3 bits (438), Expect = 4.5e-40 Identity = 101/142 (71.13%), Postives = 105/142 (73.94%), Query Frame = 0
BLAST of Carg17985 vs. TrEMBL
Match: tr|W9QYA2|W9QYA2_9ROSA (Uncharacterized protein OS=Morus notabilis OX=981085 GN=L484_018387 PE=4 SV=1) HSP 1 Score: 161.8 bits (408), Expect = 1.3e-36 Identity = 100/142 (70.42%), Postives = 107/142 (75.35%), Query Frame = 0
BLAST of Carg17985 vs. TrEMBL
Match: tr|A0A2P5D8Y5|A0A2P5D8Y5_PARAD (Rho GTPase-activating gacO-like protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_085060 PE=4 SV=1) HSP 1 Score: 161.0 bits (406), Expect = 2.3e-36 Identity = 100/142 (70.42%), Postives = 110/142 (77.46%), Query Frame = 0
BLAST of Carg17985 vs. TrEMBL
Match: tr|M5WDG9|M5WDG9_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_6G020200 PE=4 SV=1) HSP 1 Score: 159.5 bits (402), Expect = 6.7e-36 Identity = 100/142 (70.42%), Postives = 107/142 (75.35%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: The following gene(s) are paralogous to this gene:
The following block(s) are covering this gene:
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