Carg10009 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg10009
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	AUGMIN subunit 8-like
Location	Cucurbita_argyrosperma_scaffold_030 : 933713 .. 935209 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexonthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGCAGATGAGCTACCTCAATGAATGGGCTGTGCTTGAAAGAAGCCACAATCGATCCTTATCAGGAATCATAGAGGATTTGGAGTCGAGAACTCTTCGTGTTCCAGTAACTGGAGGAGCAAGAGTATGCTACATTAGCCAGTAATTTGTTTTAATTATGGGAAGCCGAGTATTGGTAACTGACAACAATCTTTTATTTACAGGCAGATGCTTGCTCTTTAAATGGTGCAATTTGTTCAGCCGTTGGGGTGATGCAGGCAATGGGATCCTCCATTTGCTCCTTACTCCCAAGGGTATACTTATACAACTCCTTGAATGTCATCAATATTTAGTAGTTTTTTCACCCCATCTTCCATGAAATCAAGAGTCTCTGCAATTATTATGGACATTGACCAATCTTGTCATCTTATAATGCAATTGATGTCCTTGCTGCTTGAGAATAAGAATAGTTCTGATCACAATAGCTAGAGGAGATAAACTTAGTGCTGCAAGTATCTAAACCTTTGCAAACCATCAAAGCCTCTGATTTGGATTTCTCCCTCTACCAGTTAGCATCTTATACCGTGAGCTCTACATTTTGCGGATATTAATAAAAGTTCATTATATCTATCACCTGCTTGATGATTCTCATGAATCAATTACCTAGAAACTTCAGGAGATGTATTTTAAGAAATTTGGGTGGTTGAAAATCGAATTTATTGAATTGATTGCTGATGTTTGGATGGGCAATATTTAGATATCTATAGCTGTGTATATGGTTGCGAGATTCAATGCTTTTTTGTCTGCAGTTCTAGTTCTGCTATTCATCGTTGGCTTATTTGTTTTTCAGGTGGAGGTAATGCAGACGTTGGTTTTTGAACTTACTATTGTCGCATCCCAAGAAAAAGCTATGCTTGATGAATGTGTAGCATTGTTGGCTTCAACAGCGGCTTTTCAGGTGAGGATGATATTTCAGCACACTTGAATCTATTACTTTACAAGCATGCATAGAATTAAGTAAGAGTACCTAATTTGAAAGCAGGTCCAGGAACAGAGTTTGTGGACGCATCTCATACAAATGAAACAAGGACTGGACAAGTGCTGCGAGTTTTAGGCGGTTAAAGGCAAGCTTCCTAACCTGACTGGCCCAGCTAGGCTAAGCAAGCTAACAACAAAACCCATATATTTCTATTTGTTATCTATCTCACTGAAAATGAGTTATACCCCGCATGTATATTCATTTTTTAAATTCATAGCGGGAGTTTGTAGCTGTAAATCTTTTCCAATTTTAATCTATTTTATCATTTGAAAATTTTGTTCAAGCTTACATAATTCTTCCATTGCAAGAGCTCTCTGGCTTATTCTTTCAGCCTGCAACTTTATTTCTGCTTACCAATTACCATACAAAAGCAAACTAATGGAGATGGCAGAGAAGTTGAAGGGTCATCGTGCATGGTAGAGAGCCGATGTCAGGAATACAAATGGAAGAAAGAGAAGTTGTGCATATTTCAGTTCAGGT

mRNA sequence

ATGCAGATGAGCTACCTCAATGAATGGGCTGTGCTTGAAAGAAGCCACAATCGATCCTTATCAGGAATCATAGAGGATTTGGAGTCGAGAACTCTTCGTGTTCCAGTAACTGGAGGAGCAAGAGCAGATGCTTGCTCTTTAAATGGTGCAATTTGTTCAGCCGTTGGGGTGATGCAGGCAATGGGATCCTCCATTTGCTCCTTACTCCCAAGGGTGGAGGTAATGCAGACGTTGGTTTTTGAACTTACTATTGTCGCATCCCAAGAAAAAGCTATGCTTGATGAATGTGTAGCATTGTTGGCTTCAACAGCGGCTTTTCAGGTCCAGGAACAGAGTTTGTGGACGCATCTCATACAAATGAAACAAGGACTGGACAAGTGCTGCGAGTTTTAGGCGGTTAAAGGCAAGCTTCCTAACCTGACTGGCCCAGCTAGGCTAAGCAAGCTAACAACAAAACCCATATATTTCTATTTGTTATCTATCTCACTGAAAATGAGTTATACCCCGCATGTATATTCATTTTTTAAATTCATAGCGGGAGTTTGTAGCTGTAAATCTTTTCCAATTTTAATCTATTTTATCATTTGAAAATTTTGTTCAAGCTTACATAATTCTTCCATTGCAAGAGCTCTCTGGCTTATTCTTTCAGCCTGCAACTTTATTTCTGCTTACCAATTACCATACAAAAGCAAACTAATGGAGATGGCAGAGAAGTTGAAGGGTCATCGTGCATGGTAGAGAGCCGATGTCAGGAATACAAATGGAAGAAAGAGAAGTTGTGCATATTTCAGTTCAGGT

Coding sequence (CDS)

ATGCAGATGAGCTACCTCAATGAATGGGCTGTGCTTGAAAGAAGCCACAATCGATCCTTATCAGGAATCATAGAGGATTTGGAGTCGAGAACTCTTCGTGTTCCAGTAACTGGAGGAGCAAGAGCAGATGCTTGCTCTTTAAATGGTGCAATTTGTTCAGCCGTTGGGGTGATGCAGGCAATGGGATCCTCCATTTGCTCCTTACTCCCAAGGGTGGAGGTAATGCAGACGTTGGTTTTTGAACTTACTATTGTCGCATCCCAAGAAAAAGCTATGCTTGATGAATGTGTAGCATTGTTGGCTTCAACAGCGGCTTTTCAGGTCCAGGAACAGAGTTTGTGGACGCATCTCATACAAATGAAACAAGGACTGGACAAGTGCTGCGAGTTTTAG

Protein sequence

MQMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAMGSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMKQGLDKCCEF

Homology

[Close]

BLAST of Carg10009 vs. NCBI nr
Match: XP_022988560.1 (AUGMIN subunit 8-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 249.2 bits (635), Expect = 7.6e-63
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QMSYLNEWAVLERSHNRSLSG+IEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM
Sbjct: 468 QMSYLNEWAVLERSHNRSLSGVIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 527

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK
Sbjct: 528 GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 587

Query: 122 QGLDKCCEF 131
           QGLDKCCEF
Sbjct: 588 QGLDKCCEF 596

[Close]

BLAST of Carg10009 vs. NCBI nr
Match: XP_022988557.1 (AUGMIN subunit 8-like isoform X1 [Cucurbita maxima] >XP_022988558.1 AUGMIN subunit 8-like isoform X1 [Cucurbita maxima] >XP_022988559.1 AUGMIN subunit 8-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 249.2 bits (635), Expect = 7.6e-63
Identity = 128/129 (99.22%), Postives = 129/129 (100.00%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QMSYLNEWAVLERSHNRSLSG+IEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM
Sbjct: 472 QMSYLNEWAVLERSHNRSLSGVIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 531

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK
Sbjct: 532 GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 591

Query: 122 QGLDKCCEF 131
           QGLDKCCEF
Sbjct: 592 QGLDKCCEF 600

[Close]

BLAST of Carg10009 vs. NCBI nr
Match: XP_023515712.1 (AUGMIN subunit 8-like [Cucurbita pepo subsp. pepo] >XP_023515713.1 AUGMIN subunit 8-like [Cucurbita pepo subsp. pepo] >XP_023515714.1 AUGMIN subunit 8-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 247.7 bits (631), Expect = 2.2e-62
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QMSYLNEWAV ERSHNRSLSG+IEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM
Sbjct: 474 QMSYLNEWAVFERSHNRSLSGVIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 533

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK
Sbjct: 534 GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 593

Query: 122 QGLDKCCEF 131
           QGLDKCCEF
Sbjct: 594 QGLDKCCEF 602

[Close]

BLAST of Carg10009 vs. NCBI nr
Match: XP_022921738.1 (AUGMIN subunit 8-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 4.9e-62
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QMSYLNEWAVLERSHNRSLSG+ EDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM
Sbjct: 470 QMSYLNEWAVLERSHNRSLSGVKEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 529

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK
Sbjct: 530 GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 589

Query: 122 QGLDKCCEF 131
           QGLDKCCEF
Sbjct: 590 QGLDKCCEF 598

[Close]

BLAST of Carg10009 vs. NCBI nr
Match: XP_022921735.1 (AUGMIN subunit 8-like isoform X1 [Cucurbita moschata] >XP_022921736.1 AUGMIN subunit 8-like isoform X1 [Cucurbita moschata] >XP_022921737.1 AUGMIN subunit 8-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 246.5 bits (628), Expect = 4.9e-62
Identity = 127/129 (98.45%), Postives = 128/129 (99.22%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QMSYLNEWAVLERSHNRSLSG+ EDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM
Sbjct: 474 QMSYLNEWAVLERSHNRSLSGVKEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 533

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK
Sbjct: 534 GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 593

Query: 122 QGLDKCCEF 131
           QGLDKCCEF
Sbjct: 594 QGLDKCCEF 602

[Close]

BLAST of Carg10009 vs. TAIR10
Match: AT4G30710.1 (Family of unknown function (DUF566) )

HSP 1 Score: 117.9 bits (294), Expect = 4.8e-27
Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  L +WA LER H  SL G I DLE+ TLR+P TGG +AD  SL  A+ SA+ VMQAM
Sbjct: 503 QMVSLEDWATLERDHVSSLVGAISDLEANTLRLPATGGTKADTESLKAAMSSALDVMQAM 562

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSI SLL +VE M  +V EL +V ++E +M  +C  LLASTA  Q++E SL THLIQ +
Sbjct: 563 GSSIWSLLSKVEEMNIMVTELAVVVTKESSMQGKCEDLLASTAIMQIEECSLRTHLIQTR 622

Query: 122 Q 123
           +
Sbjct: 623 R 623

[Close]

BLAST of Carg10009 vs. TAIR10
Match: AT2G24070.1 (Family of unknown function (DUF566) )

HSP 1 Score: 114.8 bits (286), Expect = 4.1e-26
Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  L +WA++ER H  SL+G I DLE+ TLR+P+ GG +AD  SL  A+ SA+ VMQ+M
Sbjct: 467 QMVCLEDWAMVEREHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSM 526

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSI SL  ++E M  LV +L ++A  E  +LD+C  LLASTA  +++E+SL THLIQ K
Sbjct: 527 GSSIWSLHSQMEEMNKLVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTHLIQKK 586

Query: 122 Q 123
           Q
Sbjct: 587 Q 587

[Close]

BLAST of Carg10009 vs. TAIR10
Match: AT1G49890.1 (Family of unknown function (DUF566) )

HSP 1 Score: 97.8 bits (242), Expect = 5.1e-21
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM +L EW++L+R H+ SLSG  E L++ TLR+P+ G    D   L  A+ SAV VMQAM
Sbjct: 528 QMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVGKTVVDIQDLKHAVSSAVDVMQAM 587

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
            SSI SL  +V+ M +++ E   V ++EK +L+ C   L+  AA QV + S+ TH+IQ+ 
Sbjct: 588 SSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQGCLSRVAAMQVTDCSMKTHIIQLS 647

Query: 122 Q 123
           +
Sbjct: 648 R 648

[Close]

BLAST of Carg10009 vs. TAIR10
Match: AT5G43160.1 (Family of unknown function (DUF566) )

HSP 1 Score: 93.6 bits (231), Expect = 9.7e-20
Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 1   MQMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQA 60
           MQM +L EW V++R++  SL G  E L+  TL +PV  GA  +  S+  AICSAV VMQA
Sbjct: 141 MQMGHLEEWLVIDRNYMGSLVGAAEALKGSTLCLPVDCGAMVNVQSVKDAICSAVDVMQA 200

Query: 61  MGSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQM 120
           M SSIC LLP+V  + +L  EL  V ++++ MLD C  LL + +A QV E SL T + Q+
Sbjct: 201 MASSICLLLPKVGKISSLAAELGRVNAKDEGMLDVCRDLLNTISALQVTECSLRTQVTQL 260

Query: 121 K 122
           +
Sbjct: 261 Q 261

[Close]

BLAST of Carg10009 vs. TAIR10
Match: AT3G19570.2 (Family of unknown function (DUF566) )

HSP 1 Score: 87.0 bits (214), Expect = 9.1e-18
Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM YL EW++L+R+H+ SLSG  E L++ TLR+PV+G A  D   L  A+ SAV VM AM
Sbjct: 523 QMCYLEEWSLLDRNHSNSLSGATEALKASTLRLPVSGKAVVDIQDLKHAVSSAVDVMHAM 582

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
            SSI S             E+  +  +E+ +L++C   L   AA QV + S+ TH+IQ+ 
Sbjct: 583 VSSIFSXXXXXXXXXXXXXEMVNITGKEEVLLEQCQGFLTRVAAMQVTDCSMKTHIIQLS 642

Query: 122 Q 123
           +
Sbjct: 643 R 643

[Close]

BLAST of Carg10009 vs. Swiss-Prot
Match: sp|Q9SUH5|AUG8_ARATH (AUGMIN subunit 8 OS=Arabidopsis thaliana OX=3702 GN=AUG8 PE=1 SV=1)

HSP 1 Score: 117.9 bits (294), Expect = 8.7e-26
Identity = 67/121 (55.37%), Postives = 84/121 (69.42%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  L +WA LER H  SL G I DLE+ TLR+P TGG +AD  SL  A+ SA+ VMQAM
Sbjct: 503 QMVSLEDWATLERDHVSSLVGAISDLEANTLRLPATGGTKADTESLKAAMSSALDVMQAM 562

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSI SLL +VE M  +V EL +V ++E +M  +C  LLASTA  Q++E SL THLIQ +
Sbjct: 563 GSSIWSLLSKVEEMNIMVTELAVVVTKESSMQGKCEDLLASTAIMQIEECSLRTHLIQTR 622

Query: 122 Q 123
           +
Sbjct: 623 R 623

[Close]

BLAST of Carg10009 vs. Swiss-Prot
Match: sp|F4INP9|QWRF4_ARATH (QWRF motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=QWRF4 PE=3 SV=1)

HSP 1 Score: 114.8 bits (286), Expect = 7.3e-25
Identity = 64/121 (52.89%), Postives = 86/121 (71.07%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  L +WA++ER H  SL+G I DLE+ TLR+P+ GG +AD  SL  A+ SA+ VMQ+M
Sbjct: 467 QMVCLEDWAMVEREHISSLAGAIGDLEANTLRLPLAGGTKADLGSLKLAMSSALDVMQSM 526

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSI SL  ++E M  LV +L ++A  E  +LD+C  LLASTA  +++E+SL THLIQ K
Sbjct: 527 GSSIWSLHSQMEEMNKLVSDLAVIAKTENFLLDKCENLLASTAVMEIEERSLKTHLIQKK 586

Query: 122 Q 123
           Q
Sbjct: 587 Q 587

[Close]

BLAST of Carg10009 vs. Swiss-Prot
Match: sp|Q94AI1|QWRF2_ARATH (QWRF motif-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=QWRF2 PE=2 SV=1)

HSP 1 Score: 97.8 bits (242), Expect = 9.3e-20
Identity = 53/121 (43.80%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM +L EW++L+R H+ SLSG  E L++ TLR+P+ G    D   L  A+ SAV VMQAM
Sbjct: 528 QMGFLEEWSLLDRDHSSSLSGATESLKASTLRLPIVGKTVVDIQDLKHAVSSAVDVMQAM 587

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
            SSI SL  +V+ M +++ E   V ++EK +L+ C   L+  AA QV + S+ TH+IQ+ 
Sbjct: 588 SSSIFSLTSKVDEMNSVMVETVNVTAKEKVLLERCQGCLSRVAAMQVTDCSMKTHIIQLS 647

Query: 122 Q 123
           +
Sbjct: 648 R 648

[Close]

BLAST of Carg10009 vs. Swiss-Prot
Match: sp|F4K4M0|QWRF9_ARATH (QWRF motif-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=QWRF9 PE=3 SV=2)

HSP 1 Score: 93.6 bits (231), Expect = 1.7e-18
Identity = 57/121 (47.11%), Postives = 78/121 (64.46%), Query Frame = 0


Query: 1   MQMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQA 60
           MQM +L EW V++R++  SL G  E L+  TL +PV  GA  +  S+  AICSAV VMQA
Sbjct: 393 MQMGHLEEWLVIDRNYMGSLVGAAEALKGSTLCLPVDCGAMVNVQSVKDAICSAVDVMQA 452

Query: 61  MGSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQM 120
           M SSIC LLP+V  + +L  EL  V ++++ MLD C  LL + +A QV E SL T + Q+
Sbjct: 453 MASSICLLLPKVGKISSLAAELGRVNAKDEGMLDVCRDLLNTISALQVTECSLRTQVTQL 512

Query: 121 K 122
           +
Sbjct: 513 Q 513

[Close]

BLAST of Carg10009 vs. Swiss-Prot
Match: sp|Q8GXD9|SCO3_ARATH (Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=SCO3 PE=1 SV=1)

HSP 1 Score: 87.0 bits (214), Expect = 1.6e-16
Identity = 50/121 (41.32%), Postives = 72/121 (59.50%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM YL EW++L+R+H+ SLSG  E L++ TLR+PV+G A  D   L  A+ SAV VM AM
Sbjct: 523 QMCYLEEWSLLDRNHSNSLSGATEALKASTLRLPVSGKAVVDIQDLKHAVSSAVDVMHAM 582

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
            SSI S             E+  +  +E+ +L++C   L   AA QV + S+ TH+IQ+ 
Sbjct: 583 VSSIFSXXXXXXXXXXXXXEMVNITGKEEVLLEQCQGFLTRVAAMQVTDCSMKTHIIQLS 642

Query: 122 Q 123
           +
Sbjct: 643 R 643

[Close]

BLAST of Carg10009 vs. TrEMBL
Match: tr|A0A0A0LTR5|A0A0A0LTR5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257350 PE=4 SV=1)

HSP 1 Score: 206.5 bits (524), Expect = 3.7e-50
Identity = 108/129 (83.72%), Postives = 118/129 (91.47%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  LNEWAVLER HN+SLSG+I+DLES TLRVPVTGGA+ADA SLNGAICSAV VMQAM
Sbjct: 475 QMRCLNEWAVLERIHNQSLSGVIDDLESSTLRVPVTGGAKADAGSLNGAICSAVEVMQAM 534

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRV+VMQTLVFELTIVA+QEKAMLDEC+ALLAS AA QV+EQSLWTHLIQMK
Sbjct: 535 GSSICSLLPRVKVMQTLVFELTIVAAQEKAMLDECIALLASRAALQVEEQSLWTHLIQMK 594

Query: 122 QGLDKCCEF 131
           QGL+   +F
Sbjct: 595 QGLENVSQF 603

[Close]

BLAST of Carg10009 vs. TrEMBL
Match: tr|A0A1S3B9S2|A0A1S3B9S2_CUCME (AUGMIN subunit 8-like OS=Cucumis melo OX=3656 GN=LOC103487338 PE=4 SV=1)

HSP 1 Score: 203.0 bits (515), Expect = 4.1e-49
Identity = 106/129 (82.17%), Postives = 117/129 (90.70%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM  LNEWA+LERSHN+SLSG+I+DLES TLRVPVTGGA+ADA SL GAICSAV VMQAM
Sbjct: 475 QMRCLNEWALLERSHNQSLSGVIDDLESSTLRVPVTGGAKADAGSLKGAICSAVEVMQAM 534

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSIC LLPRV+VMQTLVFELTIVA+QEKAMLDEC+ALLAS AA QV+EQSLWTHLIQMK
Sbjct: 535 GSSICFLLPRVKVMQTLVFELTIVAAQEKAMLDECIALLASRAALQVEEQSLWTHLIQMK 594

Query: 122 QGLDKCCEF 131
           QGL+   +F
Sbjct: 595 QGLENVSQF 603

[Close]

BLAST of Carg10009 vs. TrEMBL
Match: tr|A0A2P5FNI7|A0A2P5FNI7_9ROSA (QWRF family OS=Trema orientalis OX=63057 GN=TorRG33x02_048920 PE=4 SV=1)

HSP 1 Score: 161.4 bits (407), Expect = 1.4e-36
Identity = 87/125 (69.60%), Postives = 103/125 (82.40%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM+YL++WA+LER H  SLSG +EDLE+ TLR+PVTG ARAD  SL  AICSAV VMQAM
Sbjct: 482 QMAYLDDWALLERDHMTSLSGAVEDLEASTLRLPVTGVARADIDSLKVAICSAVDVMQAM 541

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVE + +LV EL +VA++EKAMLDEC ALLAST A QV+E SL THLIQ+K
Sbjct: 542 GSSICSLLPRVESINSLVSELAVVAAREKAMLDECEALLASTTAMQVEEYSLRTHLIQLK 601

Query: 122 QGLDK 127
           + L +
Sbjct: 602 EDLGR 606

[Close]

BLAST of Carg10009 vs. TrEMBL
Match: tr|A0A2P5DAY5|A0A2P5DAY5_PARAD (QWRF family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081110 PE=4 SV=1)

HSP 1 Score: 158.7 bits (400), Expect = 8.9e-36
Identity = 85/125 (68.00%), Postives = 102/125 (81.60%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           QM+YL++WA+LER H  SLSG +EDLE+ TLR+PVTG ARAD  SL  AICSAV VMQAM
Sbjct: 482 QMAYLDDWALLERDHMTSLSGAVEDLEASTLRLPVTGVARADIDSLKVAICSAVDVMQAM 541

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVE +  LV EL ++A++E+AMLDEC ALLAST A QV+E SL THLIQ+K
Sbjct: 542 GSSICSLLPRVESINGLVSELAVIAARERAMLDECEALLASTTAMQVEEYSLRTHLIQLK 601

Query: 122 QGLDK 127
           + L +
Sbjct: 602 EDLGR 606

[Close]

BLAST of Carg10009 vs. TrEMBL
Match: tr|A0A2K2A457|A0A2K2A457_POPTR (Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G181700v3 PE=4 SV=1)

HSP 1 Score: 157.9 bits (398), Expect = 1.5e-35
Identity = 85/125 (68.00%), Postives = 101/125 (80.80%), Query Frame = 0


Query: 2   QMSYLNEWAVLERSHNRSLSGIIEDLESRTLRVPVTGGARADACSLNGAICSAVGVMQAM 61
           Q++YL++WA+LE+ H  SLSG +EDLE+ TLR+PVTGGA+AD  SL  AICSAV VMQAM
Sbjct: 475 QIAYLDDWALLEKDHIDSLSGAVEDLEASTLRLPVTGGAKADIESLKVAICSAVDVMQAM 534

Query: 62  GSSICSLLPRVEVMQTLVFELTIVASQEKAMLDECVALLASTAAFQVQEQSLWTHLIQMK 121
           GSSICSLLPRVE M  LV EL IVA+QEKA LD+C ALLAST A QV+E S+ TH IQ K
Sbjct: 535 GSSICSLLPRVEGMNALVHELAIVAAQEKAKLDQCEALLASTTAMQVEEYSIRTHRIQTK 594

Query: 122 QGLDK 127
           + L+K
Sbjct: 595 EALEK 599

The following BLAST results are available for this feature:

BLAST of Carg10009 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022988560.1	7.6e-63	99.22	AUGMIN subunit 8-like isoform X2 [Cucurbita maxima]	[more]
XP_022988557.1	7.6e-63	99.22	AUGMIN subunit 8-like isoform X1 [Cucurbita maxima] >XP_022988558.1 AUGMIN subun...	[more]
XP_023515712.1	2.2e-62	98.45	AUGMIN subunit 8-like [Cucurbita pepo subsp. pepo] >XP_023515713.1 AUGMIN subuni...	[more]
XP_022921738.1	4.9e-62	98.45	AUGMIN subunit 8-like isoform X2 [Cucurbita moschata]	[more]
XP_022921735.1	4.9e-62	98.45	AUGMIN subunit 8-like isoform X1 [Cucurbita moschata] >XP_022921736.1 AUGMIN sub...	[more]

BLAST of Carg10009 vs. TAIR10


Match Name	E-value	Identity	Description
AT4G30710.1	4.8e-27	55.37	Family of unknown function (DUF566)	[more]
AT2G24070.1	4.1e-26	52.89	Family of unknown function (DUF566)	[more]
AT1G49890.1	5.1e-21	43.80	Family of unknown function (DUF566)	[more]
AT5G43160.1	9.7e-20	47.11	Family of unknown function (DUF566)	[more]
AT3G19570.2	9.1e-18	41.32	Family of unknown function (DUF566)	[more]

BLAST of Carg10009 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUH5\|AUG8_ARATH	8.7e-26	55.37	AUGMIN subunit 8 OS=Arabidopsis thaliana OX=3702 GN=AUG8 PE=1 SV=1	[more]
sp\|F4INP9\|QWRF4_ARATH	7.3e-25	52.89	QWRF motif-containing protein 4 OS=Arabidopsis thaliana OX=3702 GN=QWRF4 PE=3 SV...	[more]
sp\|Q94AI1\|QWRF2_ARATH	9.3e-20	43.80	QWRF motif-containing protein 2 OS=Arabidopsis thaliana OX=3702 GN=QWRF2 PE=2 SV...	[more]
sp\|F4K4M0\|QWRF9_ARATH	1.7e-18	47.11	QWRF motif-containing protein 9 OS=Arabidopsis thaliana OX=3702 GN=QWRF9 PE=3 SV...	[more]
sp\|Q8GXD9\|SCO3_ARATH	1.6e-16	41.32	Protein SNOWY COTYLEDON 3 OS=Arabidopsis thaliana OX=3702 GN=SCO3 PE=1 SV=1	[more]

BLAST of Carg10009 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LTR5\|A0A0A0LTR5_CUCSA	3.7e-50	83.72	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G257350 PE=4 SV=1	[more]
tr\|A0A1S3B9S2\|A0A1S3B9S2_CUCME	4.1e-49	82.17	AUGMIN subunit 8-like OS=Cucumis melo OX=3656 GN=LOC103487338 PE=4 SV=1	[more]
tr\|A0A2P5FNI7\|A0A2P5FNI7_9ROSA	1.4e-36	69.60	QWRF family OS=Trema orientalis OX=63057 GN=TorRG33x02_048920 PE=4 SV=1	[more]
tr\|A0A2P5DAY5\|A0A2P5DAY5_PARAD	8.9e-36	68.00	QWRF family OS=Parasponia andersonii OX=3476 GN=PanWU01x14_081110 PE=4 SV=1	[more]
tr\|A0A2K2A457\|A0A2K2A457_POPTR	1.5e-35	68.00	Uncharacterized protein OS=Populus trichocarpa OX=3694 GN=POPTR_006G181700v3 PE=...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR007573	QWRF

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg10009-RA	Carg10009-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR007573	QWRF family	PFAM	PF04484	QWRF	coord: 2..94 e-value: 3.9E-36 score: 125.2
None	No IPR available	PANTHER	PTHR31807	FAMILY NOT NAMED	coord: 1..122

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg10009	Cla018748	Watermelon (97103) v1	carwmB0126
Carg10009	Csa1G257350	Cucumber (Chinese Long) v2	carcuB0136
Carg10009	MELO3C010206	Melon (DHL92) v3.5.1	carmeB0131
Carg10009	ClCG06G012570	Watermelon (Charleston Gray)	carwcgB0125
Carg10009	CSPI01G17870	Wild cucumber (PI 183967)	carcpiB0138
Carg10009	Cucsa.170680	Cucumber (Gy14) v1	carcgyB0156
Carg10009	CmaCh10G004550	Cucurbita maxima (Rimu)	carcmaB0166
Carg10009	CmaCh11G004470	Cucurbita maxima (Rimu)	carcmaB0169
Carg10009	CmoCh10G004890	Cucurbita moschata (Rifu)	carcmoB0172
Carg10009	Lsi06G011380	Bottle gourd (USVL1VR-Ls)	carlsiB117
Carg10009	Cp4.1LG18g05860	Cucurbita pepo (Zucchini)	carcpeB0185
Carg10009	CsGy1G017990	Cucumber (Gy14) v2	carcgybB0132
Carg10009	MELO3C010206.2	Melon (DHL92) v3.6.1	carmedB0135
Carg10009	CsaV3_1G029130	Cucumber (Chinese Long) v3	carcucB0142
Carg10009	Cla97C06G121780	Watermelon (97103) v2	carwmbB0133
Carg10009	Bhi06G001219	Wax gourd	carwgoB0156
Carg10009	Bhi02G000666	Wax gourd	carwgoB0165

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg10009	Silver-seed gourd	carcarB151
Carg10009	Cucumber (Gy14) v2	carcgybB0138
Carg10009	Cucumber (Gy14) v1	carcgyB0151
Carg10009	Cucurbita moschata (Rifu)	carcmoB0175
Carg10009	Cucurbita pepo (Zucchini)	carcpeB0186
Carg10009	Wild cucumber (PI 183967)	carcpiB0144
Carg10009	Cucumber (Chinese Long) v2	carcuB0133
Carg10009	Cucumber (Chinese Long) v2	carcuB0140
Carg10009	Cucumber (Chinese Long) v3	carcucB0148
Carg10009	Bottle gourd (USVL1VR-Ls)	carlsiB112