Carg27696 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.CAAAATGGATCCTCCTTCTTCAAAACAAACGGGATTTCGCGGTTGAGCCGTTAGATGTGATAGCGTAGCCAGTAGTAGCCGGAGGAGAGCTTTGGATCGGAATCAATGGAGTTCCTTCCGATTTCACTTGATGCTTACAGATTAGGGTTCATCGGAGCTGGAAAAATGGCGGAGAGTCTAGCAAGGGGAATCGTCCAATCTGGTCTCTTACCTCCTTCTCGAATCTCCACGGCTCTCTACCCCACTCCTGGCCCCCCCATTGATTTCGAATCTTTCGGTGTTCGAGTCCTCCCCAAGAACGAAAATGTATGGTTATGCTTCATCTTCATCTTTCTACTGCATCGCCATAATCGCGCTTTACGTTTTCTTTTTTCATCGATTATGTCCAGGTGGTTGAAGAAAGTGATGTGGTCATCTTCTCTGTAAAGCCTCAAATCGGTACGGCGCTTGTTCATCTCATCTACTCTTGTCCTGTTTTTCCCATTTGTTTATTCATTCATTTTTCTCCTTGGTATTCTCGTTGTCCTCTTGAAAAATATTTAAAAAAATTAGTTGAGGAATGTCTCTGGTGATTTATATCTCGAAATGCTAAGTTTTCTTGTGTGATTTATTGGTATATAATGATTTGTCTTTTGATGAACTTTATGTTAAATCGTTCTGTGATGGGAAATACTGGTTGCAGTTAAGAATGTGGTGTTGAAGCTGAGGCCTCTACTGGGGAAGAAGCTTTTGGTTTCGATTGCTGCTGGGATAAAATTGAAGGATCTGCAGGTTCTTCACTTTACTAACTTGTTTTTTTGGATTTTCTGGTGGATGAGATTTTCTTGAGTTGAGTGTTCTGTGGTAAAACAGCAGCCTCAGGGATTCTGATGCATATAGCTTTGATTATCATATCAATTTTGGGGTTTCTCTTTGAATAATTTTGCCTGAATTTTTTTTATGGAAGGAATTTTTTACTGATTTCTTTTGCTGTGAGGGGTAAGTTTGACGTGATTTAGATCCCACCTTGGTTGGAGAAGAAATGAAGCATTCCTTATAAGGATGTAGAAAGCTCTCCTTAGTGAACGCGTTTTAAAACCTTGAGGGGAAGCCTGGAAGGGAAAGCCCAAAGAGGATCATATCTTCTACCGGTGGGCTTGGGCTACTACAAATGGTATCAGAACTAGACACAGAGCGGTGTGCCAGCGTCCTGTCCCAAGGGGGTGGATTGTAAGATTCCACATTGGTTGGAGAGGGGAACAAAACATTCCTTATAAGGATGGGGAAACCTTTTCCTAGTGGACGCGTTTTAAAACCTTGAAGGGAAGCACGGAAGGGAAAGCCCAAAGAGGATAATATCTACTCACATTTCAGCCGTTAAAACCTTTTGTAGTGTTTGGTTGAATGGTTAAAAGTAAGTTTTTTAATTCTCAAATCATTCTGAAGCATTTCAAAGTACTTGGTTAGATAATTAAGTGTTTGATTACAAGTTCTTGAAGTGATTTGATGAGAAGCACTTAATTAGTGTTTCTTTCAAGAGTCTTTATAGAAGAAGTGTTATGATTTAAAAGCACTATTTTCCTACAAAAGCTTGAATTAAGCCACATACTTGTTCCATTTATTCTTCCTTTTTTCTTTAGAATATACCTTTTGTTCTTTCTTTTCTACGTACAAATTGCAGTTGGAGTAATGCTTTATACATTCAGGATTGGGCAGGTCATAACCGATTCATTAGAGTTATGCCAAATACTCCCGCAGCTGTTGGAGAGGCTGCATCAGGTATTATCTTTTCCTCTTTGCCTTAAATTTAATGTCATTTCTCTCTCTCATATATGTTTCTATAATGCTGAAATAAGTATTACTTCTTAGAGATAATAAAATTGATTTGGCTGGTATTTAATTAGAGGCTAAATTAATAAAAATACCTCGAAACTCTGTATTATTTTGTAAAAAAAAGACTGTAACTTTCAAAAATTTTAATAGTACCCTTAAACTTTTAAAAAAGTTTCAAAAATATTTTAGTGTTTTCTTTCAAAAATACCCTTGAATTTCAAAAGTGTTTCGTAAATGCTATGAAAGCTTATTAAGTTTCATTAATACCTTTCAACGTTTTTAAAACGTTAAAAACTATTATTCCCGTTAGTACCATATTTAAAAAATACTTGTGAACTTTTAAAAGTAGCATTGACATCTTTAATCTTTGTAAGAAAAAAGTTTTAAAAAGTTCTTACTATCCATGTGTGGATTGAAACCATCTATTTACACTTTGTAATCATAATAATTTAAATTTTTAAAATCATTTCTATAAATTTAAAGACATTAATGTTACTTTTGAAAGTTCATGAATATTTTTGAAGTAGGGTGATAACGGTTTTGTCCACGTGCTAACACTCAGAGCATTTTTTAATTTTTTAGAAAAGTTTAAGAGTATTAATAAAACTTTTGAATTTTTAAGAGAATTTTTAAACTACTCTTAAAAATTCAATGGTGTTTTTGAAATACTCACGAAAGTTCATGAGTATTTTTGAAATTTTTTTTATAGGTCACGGGTATTTTATCCAAAACTAACCACACTAACATAAGAGGATTTTTGAACATTTTTTTTAAAAGTTTAAGTATGTTTCTAACTTTCTTGTGAAAGTTTAAAGATATTGTGAAACTGAGAATATTTTGAAATATAGATGAATATTTTATTGATTAGCCTTAATTATATTATAATGTATGTTTTAGCAGTCACAACTGCTAATGGAACTAGGGATCCAATTAATTGGCCAATCAGGGTGCAGGTTTTGAATTACATTTGCTGAATCTTTTTTGAAATCCTACACTTAATGAATCGTTCCATTACAAATCATATAAGAAAAAAGATTTAGGCATCTTGGAACTTTAAATAAATAAAAAAACAAAAAGAAAATAATTTGAGGATGAAGGTTTCTTCATATGCTAGCCTCAATCTAGACAATGCAGCTTCTTTCTGTTTAAATACTTTCATGTTCTGCAAAATTTTGTTCAACTTTCTAATTGATAGTCTGAATTACTTGGAAGCGACCCAAACTCGCAAAATATACTCACTAACTTCAGTACTACTTTCATTACATGATGTGGATGACAGATATCAAGATTTTCAATTCGTCTTGCTCCGTGCGTAGCATGGAGAAGAACAAAAAATACATTAATGTTTTATGGTACTGACCAATGAAAAGTTCTGCTTTTTTGTTTTGACCAGTTATGAGCTTGGGAGAAGGTGCGATAAAGGAGGATGGGCAACTAATAGCTAAATTATTTGGATCTGTGGGTAAGATATGGGAAGCTGAAGAGAAGTTGTTTGATGCAATCACTGGTTTGAGGTATGTTACATGTGTGCAAGAGTTGAGTCCCACAGTTTTACAAGACTCAAAAATTTCTTCTTTCTATTGCCACTTCCTAATTATGTAGAGCCTGCTTCTGTTGAGGATACAAGATAAAATGATAGGATATTATCAGAATATGTATTTTGTTAGGATATTAGAATACTACTGGAGTATTTATGACCGTTCATAAATAAAGTGTGAGATCTCACATTGATCGTTCTAAATGGGAATGGAGTGTGAGATTCCACACCGATTAGAGAGAGGAATGAGTGTCAGCGAAGATGCTGGGGCCTGAAGAGGGTAGATTGTGAGATCCCACCTCGGTTAGAGAGGGAAACGAAACATTCTTTATAAGGATGTGGAAACCTCTCCCAAGCATACGCGACTTAAAAGTCTTGAGAGGAACCCCGAAAGGAAAAGCCCAAAGAGGACAATATCTACTAGCGGTGGCTTGGGCTATTACATAAAGGGTTTAGAGACGAGCATATTTTTTATATAGCCTCGGTAGAGAACTAAGCCTCTCAGACGGTGGGTAACCCCTTGTAATTTTCTTTCTAACGCATCCTTCCAGTTTTAGGGCCCTGGCATTCTTCAACTAATAGATACCATTATCTGTAAATGGAAATGTGCAGCGGTAGTGGGCCAGCGTACATATTCTTAGCAATAGAAGCTTTGGCTGACGGAGGAGTTGCTGCAGGTCTACCACGAGAACTTGCACTGGGTCTAGCTTCTCAAACTGTGAGTCAAATTCATCTGATATACCTGTCTAAAATAATTCATGCTGTGGGTCATATTGACATAACTCATCTGTAATTAATGTATTGCTTCTTTATCTTGGCATTTTATTTTACAATAAGAGAAAAGATCGAACTTGGCTTTTGATTTGAAGGACAAAAAGCTCAAAAGTAAACGGTCTTAGAAGAAAATTAAATTTTCAAACGAGGATGTTCTACCATACGTATAATTAAATAACTGAAGAAGCAGACGCTTCTATGATATATAATGCTTGCATATTCCAACCTTATTATCTGATAGTAGTCATACAGAACATGAGGATGATAAAAGTTATCACGAGATCCCATCCGTTGGAGAAGGGAACAAAACATTCTTTTATAAGGGTGTGGAAAACTCTCATTGACGCGTTTTAAAGTCGTGAGACTGACAGCGATACATAAGGGTCTAAAGCGGACAATATCTGCTTGCAGTAGACTTGGGCTGTTACAAATGGTATCAGAGGCAAACACTGGACGATATGCCAGCGAGGACGTTGGCCTCCCAAGGTGGATGGATTGTGAAATCCAATTTCCATTGGAGAGGGAAACGAAACATTCCTTATAAGGGTGTGGAAACCTCTCCCTAGTCGTGAGGCTGACGGAGATACGTAACAGGCTAAAGTGGACAATATCTGCTAGCAATGGACTTGAGTTGTTACAAATGGTATTAGAGCCAAACACCAGATGGTATGCCAGCGAGGACGTTGGGCTCCCAAGGGGATGGATTGTGAGATCCCATATCGATTGGAGAGAGGAATGAAGCATTCTTTATAAGAGTGTGGAAACCTCTTCCTAGCCGTGAGGCTGATGACTACATAACAGGCTAAAGCAGACAATATCTGCTAGCAGTGAACTTCGGTTGTTACAAATGGTATGAGAGCCAGACACCAAATGGTGTGCTTGCGAGGATGTTGGGCCCCTAAGGGGGTGGATTTTGAGATCCCAAATTGGTTGGAGAATGGAACAAAATATTCCTTACAAGGATGTGGAAACCTCTCCCTAGTCGTGAGACTGACAATGATACGTAACGGGCTAAAACGGACAATATCTACTAGCAGTGGCTTCAGCTGTTACATTATTGTTAAAATATTTCTTAAACTAAACAGCCATGAACTCATGATCTTCCACTATGTAGGCAGGTCATCCATCTTAGCTCCTAACTGCACTAGTTCCATATGACTTCCCATCAAGTGAAACATGTTAAGCGTAGTTATTTGGTTGTGAACCAATTGAAATGAACTGATCCAGAATTTGTTTACAGGTGCTAGGTGCAGCCACCATGATCACCAAAACTGGGAAGCATCCAGGACAGCTGAAGGATGATGTAACATCACCTGGAGGGACAACAATTGCAGGGATTCATGAACTAGAGAAGGGAAGACTCCGTGGCATATTCATGAACGCTGTGGTCGCTGCTGCGAAGCGTAGCCAAGAGCTTTCCGAAAAGTAGTTGCCAATATCGAACTTGCTAGTAAGGTTAGAGTTGATTTTATTTTGTTTCTAAGTCTTGAAGAGGTGATGAAAT CAAAATGGATCCTCCTTCTTCAAAACAAACGGGATTTCGCGGTTGAGCCGTTAGATGTGATAGCGTAGCCAGTAGTAGCCGGAGGAGAGCTTTGGATCGGAATCAATGGAGTTCCTTCCGATTTCACTTGATGCTTACAGATTAGGGTTCATCGGAGCTGGAAAAATGGCGGAGAGTCTAGCAAGGGGAATCGTCCAATCTGGTCTCTTACCTCCTTCTCGAATCTCCACGGCTCTCTACCCCACTCCTGGCCCCCCCATTGATTTCGAATCTTTCGGTGTTCGAGTCCTCCCCAAGAACGAAAATGTGGTTGAAGAAAGTGATGTGGTCATCTTCTCTGTAAAGCCTCAAATCGTTAAGAATGTGGTGTTGAAGCTGAGGCCTCTACTGGGGAAGAAGCTTTTGGTTTCGATTGCTGCTGGGATAAAATTGAAGGATCTGCAGGATTGGGCAGGTCATAACCGATTCATTAGAGTTATGCCAAATACTCCCGCAGCTGTTGGAGAGGCTGCATCAGTTATGAGCTTGGGAGAAGGTGCGATAAAGGAGGATGGGCAACTAATAGCTAAATTATTTGGATCTGTGGGTAAGATATGGGAAGCTGAAGAGAAGTTGTTTGATGCAATCACTGGTTTGAGCGGTAGTGGGCCAGCGTACATATTCTTAGCAATAGAAGCTTTGGCTGACGGAGGAGTTGCTGCAGGTCTACCACGAGAACTTGCACTGGGTCTAGCTTCTCAAACTGTGCTAGGTGCAGCCACCATGATCACCAAAACTGGGAAGCATCCAGGACAGCTGAAGGATGATGTAACATCACCTGGAGGGACAACAATTGCAGGGATTCATGAACTAGAGAAGGGAAGACTCCGTGGCATATTCATGAACGCTGTGGTCGCTGCTGCGAAGCGTAGCCAAGAGCTTTCCGAAAAGTAGTTGCCAATATCGAACTTGCTAGTAAGGTTAGAGTTGATTTTATTTTGTTTCTAAGTCTTGAAGAGGTGATGAAAT ATGGAGTTCCTTCCGATTTCACTTGATGCTTACAGATTAGGGTTCATCGGAGCTGGAAAAATGGCGGAGAGTCTAGCAAGGGGAATCGTCCAATCTGGTCTCTTACCTCCTTCTCGAATCTCCACGGCTCTCTACCCCACTCCTGGCCCCCCCATTGATTTCGAATCTTTCGGTGTTCGAGTCCTCCCCAAGAACGAAAATGTGGTTGAAGAAAGTGATGTGGTCATCTTCTCTGTAAAGCCTCAAATCGTTAAGAATGTGGTGTTGAAGCTGAGGCCTCTACTGGGGAAGAAGCTTTTGGTTTCGATTGCTGCTGGGATAAAATTGAAGGATCTGCAGGATTGGGCAGGTCATAACCGATTCATTAGAGTTATGCCAAATACTCCCGCAGCTGTTGGAGAGGCTGCATCAGTTATGAGCTTGGGAGAAGGTGCGATAAAGGAGGATGGGCAACTAATAGCTAAATTATTTGGATCTGTGGGTAAGATATGGGAAGCTGAAGAGAAGTTGTTTGATGCAATCACTGGTTTGAGCGGTAGTGGGCCAGCGTACATATTCTTAGCAATAGAAGCTTTGGCTGACGGAGGAGTTGCTGCAGGTCTACCACGAGAACTTGCACTGGGTCTAGCTTCTCAAACTGTGCTAGGTGCAGCCACCATGATCACCAAAACTGGGAAGCATCCAGGACAGCTGAAGGATGATGTAACATCACCTGGAGGGACAACAATTGCAGGGATTCATGAACTAGAGAAGGGAAGACTCCGTGGCATATTCATGAACGCTGTGGTCGCTGCTGCGAAGCGTAGCCAAGAGCTTTCCGAAAAGTAG MEFLPISLDAYRLGFIGAGKMAESLARGIVQSGLLPPSRISTALYPTPGPPIDFESFGVRVLPKNENVVEESDVVIFSVKPQIVKNVVLKLRPLLGKKLLVSIAAGIKLKDLQDWAGHNRFIRVMPNTPAAVGEAASVMSLGEGAIKEDGQLIAKLFGSVGKIWEAEEKLFDAITGLSGSGPAYIFLAIEALADGGVAAGLPRELALGLASQTVLGAATMITKTGKHPGQLKDDVTSPGGTTIAGIHELEKGRLRGIFMNAVVAAAKRSQELSEK
BLAST of Carg27696 vs. NCBI nr
Match: XP_022932845.1 (pyrroline-5-carboxylate reductase-like [Cucurbita moschata] >XP_023543593.1 pyrroline-5-carboxylate reductase-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 527.3 bits (1357), Expect = 3.1e-146 Identity = 275/275 (100.00%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Carg27696 vs. NCBI nr
Match: XP_022967877.1 (pyrroline-5-carboxylate reductase-like [Cucurbita maxima]) HSP 1 Score: 525.4 bits (1352), Expect = 1.2e-145 Identity = 274/275 (99.64%), Postives = 275/275 (100.00%), Query Frame = 0
BLAST of Carg27696 vs. NCBI nr
Match: XP_004142647.1 (PREDICTED: pyrroline-5-carboxylate reductase [Cucumis sativus] >KGN54523.1 hypothetical protein Csa_4G354630 [Cucumis sativus]) HSP 1 Score: 479.2 bits (1232), Expect = 9.6e-132 Identity = 248/276 (89.86%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Carg27696 vs. NCBI nr
Match: XP_008455688.1 (PREDICTED: pyrroline-5-carboxylate reductase [Cucumis melo]) HSP 1 Score: 479.2 bits (1232), Expect = 9.6e-132 Identity = 248/276 (89.86%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Carg27696 vs. NCBI nr
Match: XP_022153943.1 (pyrroline-5-carboxylate reductase [Momordica charantia]) HSP 1 Score: 474.9 bits (1221), Expect = 1.8e-130 Identity = 246/276 (89.13%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Carg27696 vs. TAIR10
Match: AT5G14800.1 (pyrroline-5- carboxylate (P5C) reductase) HSP 1 Score: 389.0 bits (998), Expect = 2.4e-108 Identity = 202/275 (73.45%), Postives = 236/275 (85.82%), Query Frame = 0
BLAST of Carg27696 vs. Swiss-Prot
Match: sp|P17817|P5CR_SOYBN (Pyrroline-5-carboxylate reductase OS=Glycine max OX=3847 PE=2 SV=1) HSP 1 Score: 397.1 bits (1019), Expect = 1.6e-109 Identity = 207/274 (75.55%), Postives = 238/274 (86.86%), Query Frame = 0
BLAST of Carg27696 vs. Swiss-Prot
Match: sp|P54904|P5CR1_ARATH (Pyrroline-5-carboxylate reductase OS=Arabidopsis thaliana OX=3702 GN=PROC1 PE=2 SV=1) HSP 1 Score: 389.0 bits (998), Expect = 4.3e-107 Identity = 202/275 (73.45%), Postives = 236/275 (85.82%), Query Frame = 0
BLAST of Carg27696 vs. Swiss-Prot
Match: sp|Q04708|P5CR_PEA (Pyrroline-5-carboxylate reductase OS=Pisum sativum OX=3888 GN=PROC PE=2 SV=1) HSP 1 Score: 376.7 bits (966), Expect = 2.2e-103 Identity = 200/274 (72.99%), Postives = 229/274 (83.58%), Query Frame = 0
BLAST of Carg27696 vs. Swiss-Prot
Match: sp|O04016|P5CR_ACTCH (Pyrroline-5-carboxylate reductase OS=Actinidia chinensis OX=3625 PE=2 SV=1) HSP 1 Score: 373.6 bits (958), Expect = 1.9e-102 Identity = 197/274 (71.90%), Postives = 227/274 (82.85%), Query Frame = 0
BLAST of Carg27696 vs. Swiss-Prot
Match: sp|Q9HH99|P5CR_METAC (Pyrroline-5-carboxylate reductase OS=Methanosarcina acetivorans (strain ATCC 35395 / DSM 2834 / JCM 12185 / C2A) OX=188937 GN=proC PE=3 SV=1) HSP 1 Score: 225.3 bits (573), Expect = 8.1e-58 Identity = 126/270 (46.67%), Postives = 177/270 (65.56%), Query Frame = 0
BLAST of Carg27696 vs. TrEMBL
Match: tr|A0A1S3C257|A0A1S3C257_CUCME (Pyrroline-5-carboxylate reductase OS=Cucumis melo OX=3656 GN=LOC103495803 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 6.3e-132 Identity = 248/276 (89.86%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Carg27696 vs. TrEMBL
Match: tr|A0A0A0KYH5|A0A0A0KYH5_CUCSA (Pyrroline-5-carboxylate reductase OS=Cucumis sativus OX=3659 GN=Csa_4G354630 PE=3 SV=1) HSP 1 Score: 479.2 bits (1232), Expect = 6.3e-132 Identity = 248/276 (89.86%), Postives = 263/276 (95.29%), Query Frame = 0
BLAST of Carg27696 vs. TrEMBL
Match: tr|A0A2P5BU71|A0A2P5BU71_PARAD (Pyrroline-5-carboxylate reductase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_210250 PE=3 SV=1) HSP 1 Score: 419.1 bits (1076), Expect = 7.8e-114 Identity = 220/274 (80.29%), Postives = 244/274 (89.05%), Query Frame = 0
BLAST of Carg27696 vs. TrEMBL
Match: tr|A0A2P5CJL0|A0A2P5CJL0_9ROSA (Pyrroline-5-carboxylate reductase OS=Trema orientalis OX=63057 GN=TorRG33x02_282540 PE=3 SV=1) HSP 1 Score: 418.3 bits (1074), Expect = 1.3e-113 Identity = 219/274 (79.93%), Postives = 244/274 (89.05%), Query Frame = 0
BLAST of Carg27696 vs. TrEMBL
Match: tr|A0A061EVD2|A0A061EVD2_THECC (Pyrroline-5-carboxylate reductase OS=Theobroma cacao OX=3641 GN=TCM_024404 PE=3 SV=1) HSP 1 Score: 417.5 bits (1072), Expect = 2.3e-113 Identity = 215/275 (78.18%), Postives = 244/275 (88.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |