Carg04978-RA (mRNA) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04978-RA
Type	mRNA
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ELMO domain-containing protein A
Location	Cucurbita_argyrosperma_scaffold_060 : 609500 .. 615594 (+)
Sequence length	1187

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGTGCTTTTTGAAACGGCTGAAGAAGAGGAAGATAATAGAATTGGGAATCCATACACATTCTCATTACGAACAACCTCTCAACCAACTTCCATGGACTCTCAGTCTCAGATCTTGCTCCAGCCCTAGCCGCTTTCCAGGTTCCTATTCCTTTTCCTTTTTCTCTTCTTTGATTCTTCGTTTTTTGTTTTCTCTCCTTGGTATCCATCAACGCCCCATTCTCGCCGCCGTTTTTTCCTCCTTTGATTGTATCGTTTGTTGTTTCTGATTGCCGTGATTGTGCTCTATTGGTGTACTGCTTTCGGATCCTGTTTGCTTCTTTCTTTCCTTATGCATTTTGAGTCTTTTTTGCTTTATCATTGATTTCTGTGATTCTGGATTTTGTTTCTTCTAATGCTATAATTCTGATTGTGGTGGATGAATGTCCATTTCCAGAGGTTTTATTGTGTGGATAAGGTGTGGGAGCTTGCTGTGGTGCTGGTGATGGATGTGGTGGAGTGACGGACAGAGGAGGCGGGGTGAGGGAGATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGTGAATATTATCTTTAATGTCCGCTTCTCTCTCTCTCTCTCTCTCTACTGTTATTTACATTAAAATTAGAATTTTCGTCCTCGCTTTTCTTTCGCTGAAAAGTTTTCTCTCTTTTGCTCTCTCTCTTCTTCTTTTTTTTTTCTTTAATAAAAAAAAAAAAAATCTTATTCATAATTCATGTTTTACTTTTTGGTTTAGAATTTTAGATCTATGTCTTGAAGTTGAGTAATGTGCGGTAAGCTCTGCTTATACTGAGGCTCGTACTGGTTTCATGATTGCTGAGTTTCAAATCTGTATCGGTGGGTCTACTCAGTGGGATTTTTTTTCTTATAAATTTAAAAGTTTAATTTAAGTTTTTTCAACTCCCTTCCGACTCTTCCTTCATCGTATGTATTATTTGTGATCTAGTACCAGAAGTTTGTGATTTTGATATTCGTATTTTAAATATTTTTTTATTGCGTTGTACGTCGTCAACTGAAATTTGTGGAAGCTATAGATCTTTCTGGCAGAAATCATGAAGCTCATTAATTAACCACGTTTCTGTCTGATTAGATTATTATTTTCTCCGATGTACGGTTGATTGTTGGATGAACGTGATGGCAGGACTCAAGCTTGCCTTAGTTGCTTGACATAACTCAAATTCCTTTTTGTAGTTTGCGTGTTTTCTTCGTTGATGGCGTTGTCTCTACTGCATATTCTAATTATTGACTGTGCTATATAGTAAATATAAAATTTATTTTAATTTTCTTAGTGTGCCATATAGAATGTTGTTTTTTGCTTGTGGGAGAAATATTCTGCAATTACTATCGGTGTCTTTGGAATTAGTCAAGATCTCTCCCCACTTTTACTCAATACTTTCCCCTGTTTTTTAATTGACTGTTGTGTGAAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGAGTAAGGAAGAAAAAGTGTAAGGATCATCAAATCTTCTTTGTGGTACATTAGTCCTCTCAGTATGTGTTATGTGCTGTTAATTGTTTTGCAAACTTGGGGGTTTTTTTCTAGCATAAACAGGCAAATAGCTCTCTCCACCTTATCATGTGTGTTAATATGACAATATTCTCTACTTTTCTTTGTTTCCATTTTTAATTGTGCTTTGCTGCGGGAAACTATTTTCCTTATCTTTATCTAATATCTTTTCCATTTTAGGATCCTCATAGTCAGTTGTCAGAAACTTGTACTGGCTGCCCTTTCATGAATCATGACTTTTCATGGAACTTCTGAAAGACATTCTTTTACCATATATTCAAGCTCGGGTAACCATGAATTAGCTGGATAGCAAATAGCAAGGGGATTAAGTTCAATAGCATATGCTTGAACTTTTGCTTGTCTATATTTTTATGATATACTTTCAAATGGCTGTCTACAGGATTAGAGGACTTCGTAATTGATAGATTGATTGCCGATGTGCTTTTGCTTTATTTCAGCTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGTAACTTTATGCATTTGGTGATTGTTAGCTTCAATTTCCATTGAACGGGAAGAAGCCTCATTATAACTATTATTTTGATTCGAAGTGTTTGGAAGCTGAGCAATAGATGGAGCTGAGCGATAGATGGGTGACTTGACTAAAACAAGGGAAGGTGATAGTTAAAAGTAAGGTCTTGAAAGTGGAGATGAGAGGGTGATTCAGCTTAAACAAAGAAAGGTGAGCGTGACAGTGGAGAGGCAGATCTAGGATGAGGGAGGATGGGGGCGGATTGATAGTTGTAGGGAGATAATTTAGAGTGTAGAAATGTTGCTGAACTAAAAAAAAATTGATAATAGTTGAATGGTCGAGTGGTTGTATGAGTTGGAGATGAGCAATAGATGGGTGACTTGACTAAAACAAGGGAAGGTGATAGTTAAAAGTGAGGTCTTGAAAGTGGAGACGAGGTGAGTGTGTGACAGTGAGAGGCAGATCTAGGAAGTGGGAGGATGGGGGCGGATCGGATGGTTGTATGGAGATCTAGAGAATAAAAATGAAGGGGAAAACTGGGGGGGGGGACTTAGTAAGAGGGAGATATGGAGATGAGGGGTGACTTGGATAGTGAACGAGGTTTGGTTTGGTGGTGCAAGGGTGGTTTAGAGAGTGAAAAAGGAGACAAGGTCGAGGGCTTGGGTGGCTAAAAGCAAAACAAGGAAAAATAAACTGAAGAATTTTTCTTGCTAAAGAAATTATTATCTTAAATAGTAGCAATAAGTACCAGGTAAGTAGAATCTTGAGAAAATTTAAACTCCTTGCTAGAAGAGAACAAATTGTATTAAGAAGTTGTCGCATGCAGAGCTTTACTTTTGTTCTTCTTCTTAAGATCATTTTTTATTAACTGTTTTAGTTAGAATTTGTATCTCAAAATCATAGCACATGTTGGTTCTTTTACTAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGTTTGTTATCTACACAACGTTTTTTGTCCTTCTATAAGATGTAAAAAAATGTAGGGAGATTGTGTGTGTGTGTCTTGTGGAGGGAGAATTTGAGACTATTTTGTTTAGTTTTTCTCCTTTATGATGATTTGGACTCTTAATAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGTAATCAGATTTACGTCGTTGCTTCATACTTGACATGAATAGCTCTTATAATTTATTACCAACGTTATTGCTGTGTTAACTCTTATTAATTGGGTTTTATCTCTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGGTATGAAACTTTTTTTTTACCTTGCTTTAAACTTCTTTGAGCCTTGATTAGTTTCCTTTTGGGAAAAAAAAAAAAAAAGAAAAAAAAGCTTAAAAACAAGGTTATTAAATGGAAATCAAACATACTGATTTTGACAGAGGAACCCAGATTATTATTACTTCATGAGTGTATGCATGTGAATATTTTACAAAAAAGAAAAAAAAAAGATATTAATGTGGTCGGTTTATGCATAAACAACGCATTTATGCTTCTAGTTGCTGTCTTTTAACACTAAAGTTTCTGGACATCATTACAGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGGTTTGCTATCTATATTAATCAATCTATTCAACGGAAAAATAGTGTTCTTTTATTCAGAAATCTAGGGTCCTAACTTGTGGAAATGCCATGAAATGATATTTTCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGGTATGTGCAACCACCTTATTGAATGTATGAATAAATATTTTATGAAAATCATGCTTATTAAGTGAGCTATTTTCCTGCTTGTGATTTCTGCGTTACAAACATACTTTACAATTGGGTATAGGAAATCTTCTTAGATGATTTCATAATATCATGTAGAATTTTACATGTGGAACAAGCTCATCTCTCTTCTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTAATTTTTATATTTGCTAATCCAAGTTTTGCCCTTTTCCTGACAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATGTATGTAGTCTCAACTCAATTTTTTCTTGAAATTGTCAAATTTATTGACTTAACATCTAAACTGGCTATACTGTTTTATATGCACTCACTAGTCATACCGAGCTATGAAAATACATTGAATCAAGATCCTTTCGAACTTTGGGTTAAGACTCTTCGAATCAAATTAAGACCTGTCTTAATGCATTCAACTTTGCCACTCCTTCCCATATAAATGTTGGGCATTGTGATCCGTGTAAACATACTGTTAGGCCACCATTTATAGCATTTTATCAAAGGAAGGGCAAGAAAGACAATTTAGCCTCGACCAGTTAGTTACTGGTCAGTTATGTGGGAGTGAGTGTCGGGTGTGCAAGGGGATAGCTGCTGTGTAAGGGGGTTATAAAGTGCATTTTGGTTTTAGCTAGTGGCATTTAGCTTTTCATTCGATTGTTTTTCATTTTTAGTCTTTTGGTTAATTGTCTAAAAGAGGATATGGAACTTGTATTGATCTTTGATTCCCAATTGATAGTTCCCCTAACCTTACAAATTGGTATCAAAGCAACTCGCCCAAGGGAGATTTGGAAAGATGAATCAAAAGAGGATTGAAGAAAAAGGATTGGAGTAGACAAGGAAATAGTGGAATTAAAATTAGAAATCATATTCAAGGGAAGGTGATGGGGTTTCCTGCAATCGAGGAGTCTTTGACGACACTCATGGCCCCTGCGCAAGCATGACATGCACAAATCAAGAAATGGTCCAAAATTTTTAAAGAGGACAATATTGACCAGTGATGGGCTTGAGCTATTACAAATGGTATGAGAGCCAGACATCAGACAGTGTGCGAGCGAGGATGCTGGACTCCTAAGGGGGTCGGAGAGGAGAACAAAACATTGCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACACATATTAAAACCTTGAGGGGAAGTCCAGGGGAGAAAGTCCAAAGAGTACAATATCTGCGAGTGGTGGACTTAGACTAGAGTTGTGGAAAGCTTGAGGAAAGAATTTTCCAACGGCCGGATTAAGTTCAATAAGGTCGAAATGCCGGTGTTAGGAGGAAGGGTCCTTGTCCGTGGCTTGTTTGAGCAGACAGGTTGTTCATTCTAGGCTTAAGTTGTCTGAGAGGGAAGGAAAGGAACTTATATTACCTTGGGGCAAACTTATACTTCCTTACGCACAATTCAATGTTAAATTTTAAATTTAGGCCCGGCTAATGTCTAAATTTGAGCATACCTTAAATGGTCAAGACATTATATTTGTCCTAAACCTCAATATTTCAGTTTTTACTCATACCACGACTGACGTTTCATGATTTTCCTCTCTTTTGTAGACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAGTTCGTTTACCGACCAAACACCTCATTTTCTAATGGAAAATAGCTTGTGGTATCGTCTTCAATAGCTTTTAACTAGATAGAGGTTTTTTTTTTTTTTTTGTACATGATT

mRNA sequence

AAAGGTGCTTTTTGAAACGGCTGAAGAAGAGGAAGATAATAGAATTGGGAATCCATACACATTCTCATTACGAACAACCTCTCAACCAACTTCCATGGACTCTCAGTCTCAGATCTTGCTCCAGCCCTAGCCGCTTTCCAGAGGTTTTATTGTGTGGATAAGGTGTGGGAGCTTGCTGTGGTGCTGGTGATGGATGTGGTGGAGTGACGGACAGAGGAGGCGGGGTGAGGGAGATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGACTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAGTTCGTTTACCGACCAAACACCTCATTTTCTAATGGAAAATAGCTTGTGGTATCGTCTTCAATAGCTTTTAACTAGATAGAGGTTTTTTTTTTTTTTTTGTACATGATT

Coding sequence (CDS)

ATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGACTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAG

Protein sequence

MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ

Homology

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BLAST of Carg04978-RA vs. NCBI nr
Match: XP_022960492.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 530.4 bits (1365), Expect = 3.7e-147
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 267

[Close]

BLAST of Carg04978-RA vs. NCBI nr
Match: XP_023515309.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.4 bits (1365), Expect = 3.7e-147
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 4   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 63

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 64  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 123

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP
Sbjct: 124 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 183

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 184 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 243

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 244 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 270

[Close]

BLAST of Carg04978-RA vs. NCBI nr
Match: XP_023004750.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 1.8e-146
Identity = 265/281 (94.31%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 267

[Close]

BLAST of Carg04978-RA vs. NCBI nr
Match: XP_008459793.1 (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo])

HSP 1 Score: 508.4 bits (1308), Expect = 1.5e-140
Identity = 255/281 (90.75%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQ LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978-RA vs. NCBI nr
Match: XP_004140510.1 (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis sativus] >KGN46512.1 hypothetical protein Csa_6G105170 [Cucumis sativus])

HSP 1 Score: 505.8 bits (1301), Expect = 9.7e-140
Identity = 254/281 (90.39%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECL  LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978-RA vs. TAIR10
Match: AT2G44770.1 (ELMO/CED-12 family protein)

HSP 1 Score: 446.4 bits (1147), Expect = 1.3e-125
Identity = 220/281 (78.29%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR  GSFVAVRRISQGLERG+  +S+S               E V GSAAWLGRGLSC
Sbjct: 1   MDDR-EGSFVAVRRISQGLERGSVYNSSS--------------AEAVPGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRR+SDA  +FDLTPAQEECLQ+LQNRID+AYD++IP HQEALR LW ++FPEEEL 
Sbjct: 61  VCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELH 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+FARNF KSFQDLLRKQVGDRS+WEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAG+N+TFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCI FKLMD++WL+M
Sbjct: 181 FAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYM+FNTVMK+TRRQLE+EL++EDI  LE+LPSY LL+Q
Sbjct: 241 RASYMEFNTVMKSTRRQLERELMLEDIMHLEDLPSYALLNQ 266

[Close]

BLAST of Carg04978-RA vs. TAIR10
Match: AT3G60260.1 (ELMO/CED-12 family protein)

HSP 1 Score: 441.0 bits (1133), Expect = 5.3e-124
Identity = 214/281 (76.16%), Postives = 245/281 (87.19%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERG+  HS+S               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGSVYHSSS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VC Q R+ D RPSFDLTPAQEECLQ LQ+RID+AYD+SIP+HQEAL+ LW +AFPEEEL 
Sbjct: 61  VCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELH 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           G++S+QWKEMGWQGKDPSTDFRGGGFISLENLL+FAR FPKSF  LLRKQVGDRS+WEYP
Sbjct: 121 GIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAG+NITFMLIQMLDLEAVKPR++VG TFL+FL+ N+SAFDLLYCI FKLMD++WL+M
Sbjct: 181 FAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYM+FNTVMK+TRRQLE+E+++EDI+ LE+LPSY LL Q
Sbjct: 241 RASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSYSLLSQ 266

[Close]

BLAST of Carg04978-RA vs. TAIR10
Match: AT1G67400.1 (ELMO/CED-12 family protein)

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-78
Identity = 140/260 (53.85%), Postives = 188/260 (72.31%), Query Frame = 0


Query: 21  RGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAW-LGRGLSCVCAQRRESDARPSFDLTPA 80
           RG   HS     S     +        + + +W + + L+CVC  R+ +  R   +LTP 
Sbjct: 21  RGCEAHSDDVSASSAGLINADAEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPL 80

Query: 81  QEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPST 140
           QEE L+ L+ R+   YD S P+HQ+ALRALW+  +P+E+L+ LIS+QWK MGWQGKDPST
Sbjct: 81  QEERLKRLRKRMKNYYDASRPDHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPST 140

Query: 141 DFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLE 200
           DFRG GFISLENLLFFA+ F  SFQ LL KQ G R+ WEYPFAVAGVNITFM++QMLDLE
Sbjct: 141 DFRGAGFISLENLLFFAKTFSTSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLE 200

Query: 201 AVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLE 260
           A KPR+ +   FL+ L+E++ AFDLLYC+ F +MD++WL  +A+YM+FN V++ TR QLE
Sbjct: 201 ASKPRSFIRLVFLQMLSESEWAFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLE 260

Query: 261 KELLMEDISRLEELPSYDLL 280
           +EL+M+D+ R+E++PS+ LL
Sbjct: 261 RELMMDDVFRIEDMPSFSLL 280

[Close]

BLAST of Carg04978-RA vs. TAIR10
Match: AT1G03620.1 (ELMO/CED-12 family protein)

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-77
Identity = 138/242 (57.02%), Postives = 181/242 (74.79%), Query Frame = 0


Query: 41  LITTEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIP 100
           ++T   + G+ +W+G          R  D    + L+P QEE LQ LQ+R+ + +D + P
Sbjct: 27  VVTATGMVGTRSWIG---GLFTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRP 86

Query: 101 EHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFP 160
           +HQE+L+ALWNVAFP   L GL++EQWKEMGWQG +PSTDFRG GFI+LENLLF AR +P
Sbjct: 87  DHQESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYP 146

Query: 161 KSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLE-AVKPRTLVGATFLKFLAEND 220
             F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ L G  FLK L E++
Sbjct: 147 VCFRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDE 206

Query: 221 SAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLL 280
            AFD+LYCI F +MD +WLAMHASYM+FN V++ATR QLE+EL ++DI R+++LP+Y+LL
Sbjct: 207 RAFDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 265

Query: 281 DQ 282
            Q
Sbjct: 267 FQ 265

[Close]

BLAST of Carg04978-RA vs. TAIR10
Match: AT3G03610.1 (ELMO/CED-12 family protein)

HSP 1 Score: 271.6 bits (693), Expect = 5.6e-73
Identity = 137/250 (54.80%), Postives = 183/250 (73.20%), Query Frame = 0


Query: 32  YSQVIAFHVLITTEVVAGSAAWLGRGLSCVCAQRRESDAR--PSFDLTPAQEECLQTLQN 91
           +SQ+IA       ++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ 
Sbjct: 73  FSQLIAQWAQWIAKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKR 132

Query: 92  RIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISL 151
           RI+I +D S  EHQ+ALR LW +A+P+ EL  L SE WKEMGWQG DPSTDFRGGG+ISL
Sbjct: 133 RIEIPFDGSRMEHQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISL 192

Query: 152 ENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGA 211
           ENL+FFA+ +P+SFQ LL KQ G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G 
Sbjct: 193 ENLIFFAKTYPESFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGI 252

Query: 212 TFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISR 271
            FL FL E++ AFD LYCI F++MD +WLA  ASYM+FN V+K+TR QLE+EL ++D+S 
Sbjct: 253 RFLGFLEEDEMAFDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSS 312

Query: 272 LEELPSYDLL 280
           + +LP+++LL
Sbjct: 313 ITDLPAFNLL 321

[Close]

BLAST of Carg04978-RA vs. Swiss-Prot
Match: sp|Q54YW1|ELMOA_DICDI (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-26
Identity = 62/194 (31.96%), Postives = 100/194 (51.55%), Query Frame = 0


Query: 80  QEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPST 139
           Q    Q + NR ++ ++    EH   L  LW++ +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 140 DFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFML---IQML 199
           DFR  G   L+NL++FA+N+ + F+ ++  Q+ DR   EYP A AG+ +TF L   I  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 481

Query: 200 DLEAVKP---------------RTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMH 256
               + P                 +    F      +  AF+ +YC TF+++D  W  M+
Sbjct: 482 GTPNLNPYNSXXXXXXXXXXXXXXIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 541

[Close]

BLAST of Carg04978-RA vs. Swiss-Prot
Match: sp|Q54RS7|ELMOC_DICDI (ELMO domain-containing protein C OS=Dictyostelium discoideum OX=44689 GN=elmoC PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.1e-23
Identity = 62/194 (31.96%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 76  LTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGK 135
           +T  Q + ++ L  +    Y+++ P+H+E L+ LW++ +PE+E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 416

Query: 136 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQM 195
           DP+ DFRG G + L NL+   ++     Q++L +   DR   +YPFAVAG+NI+ ++ ++
Sbjct: 417 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 476

Query: 196 L-----DLEAVKPRTLVGATFLKFLA----ENDSAFDLLYCITFKLMDREWLAMHASYMD 255
                  L+     +   ++++  L      ND AF+ LY + F L+D  W+ M+A+YM 
Sbjct: 477 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 536

Query: 256 FNTVMKATRRQLEK 261
           F  V+K  + QL +
Sbjct: 537 FPLVIKKLKSQLNE 543

[Close]

BLAST of Carg04978-RA vs. Swiss-Prot
Match: sp|Q54VR8|ELMOB_DICDI (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 55/172 (31.98%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 85  QTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGG 144
           ++++ +  I YDN+  EH+ +L  LW    P+      +S++W  +G+QG DP+TDFRG 
Sbjct: 108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query: 145 GFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPR 204
           G + L+NL++F+    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP 
Sbjct: 168 GILGLDNLIYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----KPH 227

Query: 205 TLVGATFLKFLAENDSA---FDLLYCITFKLMDREWLAMH-ASYMDFNTVMK 253
                 F  +  +N S    F+ LY + F   DR + +    S M+FNT+ K
Sbjct: 228 ------FKIYFFKNGSTLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

[Close]

BLAST of Carg04978-RA vs. Swiss-Prot
Match: sp|Q8IZ81|ELMD2_HUMAN (ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.9e-18
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 95  YDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 154
           YD+   +H+E L  LWN+  P ++L   IS+QW E+G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 155 FARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVK 203
           F+ N+      +L +   +     Y +A+ G+N+T M   +L  EA+K
Sbjct: 180 FSENYTSEAHQILSR--SNHPKLGYSYAIVGINLTEMAYSLLKSEALK 225

[Close]

BLAST of Carg04978-RA vs. Swiss-Prot
Match: sp|Q54UP9|ELMOD_DICDI (Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum OX=44689 GN=elmoD PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 95  YDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 154
           Y+   P HQ  L  LW+  FP +  +    E W+ +G+Q KDPS+DFRG G   L++L++
Sbjct: 301 YNKDEPSHQRLLETLWSTLFPNQVFQ-RSHENWQIIGFQNKDPSSDFRGMGLAGLKHLIY 360

Query: 155 FARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTL------VG 214
            A+N    F + L  +  + +   YP+A +G+ +T  L+     E VKP  +      V 
Sbjct: 361 LAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKPINISANHSDVI 420

Query: 215 ATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMK 253
                 L E+++A + +YC+  ++    W   +A+YM F  V +
Sbjct: 421 GQIYPILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

[Close]

BLAST of Carg04978-RA vs. TrEMBL
Match: tr|A0A1S3CBG7|A0A1S3CBG7_CUCME (ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498817 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 9.9e-141
Identity = 255/281 (90.75%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQ LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978-RA vs. TrEMBL
Match: tr|A0A0A0KDT2|A0A0A0KDT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 6.4e-140
Identity = 254/281 (90.39%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECL  LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978-RA vs. TrEMBL
Match: tr|A0A061DUL3|A0A061DUL3_THECC (ELMO/CED-12 family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005729 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.4e-134
Identity = 243/279 (87.10%), Postives = 256/279 (91.76%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+SIPEHQ ALRALWN AFPEE+LR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSIPEHQNALRALWNAAFPEEQLR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAR+FPKSFQDLLRKQ GDRS+WEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARSFPKSFQDLLRKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLL 280
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLE+LPSY LL
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEDLPSYSLL 264

[Close]

BLAST of Carg04978-RA vs. TrEMBL
Match: tr|A0A1R3HH59|A0A1R3HH59_COCAP (Engulfment/cell motility, ELMO OS=Corchorus capsularis OX=210143 GN=CCACVL1_19375 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.4e-134
Identity = 244/281 (86.83%), Postives = 256/281 (91.10%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+S+PEHQEALRALWN AFP+EELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSLPEHQEALRALWNAAFPKEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
            LIS+QWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLL KQ GDRS+WEYP
Sbjct: 121 SLISDQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLWKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAEN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLEELPSY LL +
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEELPSYSLLSR 266

[Close]

BLAST of Carg04978-RA vs. TrEMBL
Match: tr|A0A1R3K0X9|A0A1R3K0X9_9ROSI (Engulfment/cell motility, ELMO OS=Corchorus olitorius OX=93759 GN=COLO4_12395 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.4e-134
Identity = 244/281 (86.83%), Postives = 256/281 (91.10%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+S+PEHQEALRALWN AFP+EELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSLPEHQEALRALWNAAFPKEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
            LIS+QWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLL KQ GDRS+WEYP
Sbjct: 121 SLISDQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLWKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAEN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLEELPSY LL +
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEELPSYSLLSR 266

The following BLAST results are available for this feature:

BLAST of Carg04978-RA vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960492.1	3.7e-147	94.66	ELMO domain-containing protein A-like isoform X1 [Cucurbita moschata]	[more]
XP_023515309.1	3.7e-147	94.66	ELMO domain-containing protein A-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023004750.1	1.8e-146	94.31	ELMO domain-containing protein A-like isoform X1 [Cucurbita maxima]	[more]
XP_008459793.1	1.5e-140	90.75	PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo]	[more]
XP_004140510.1	9.7e-140	90.39	PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis sativus] >K...	[more]

BLAST of Carg04978-RA vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44770.1	1.3e-125	78.29	ELMO/CED-12 family protein	[more]
AT3G60260.1	5.3e-124	76.16	ELMO/CED-12 family protein	[more]
AT1G67400.1	2.0e-78	53.85	ELMO/CED-12 family protein	[more]
AT1G03620.1	2.2e-77	57.02	ELMO/CED-12 family protein	[more]
AT3G03610.1	5.6e-73	54.80	ELMO/CED-12 family protein	[more]

BLAST of Carg04978-RA vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54YW1\|ELMOA_DICDI	4.9e-26	31.96	ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA P...	[more]
sp\|Q54RS7\|ELMOC_DICDI	5.1e-23	31.96	ELMO domain-containing protein C OS=Dictyostelium discoideum OX=44689 GN=elmoC P...	[more]
sp\|Q54VR8\|ELMOB_DICDI	3.1e-20	31.98	ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB P...	[more]
sp\|Q8IZ81\|ELMD2_HUMAN	4.9e-18	38.89	ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1	[more]
sp\|Q54UP9\|ELMOD_DICDI	3.2e-17	30.49	Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum ...	[more]

BLAST of Carg04978-RA vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBG7\|A0A1S3CBG7_CUCME	9.9e-141	90.75	ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KDT2\|A0A0A0KDT2_CUCSA	6.4e-140	90.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 SV=1	[more]
tr\|A0A061DUL3\|A0A061DUL3_THECC	1.4e-134	87.10	ELMO/CED-12 family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005729 PE...	[more]
tr\|A0A1R3HH59\|A0A1R3HH59_COCAP	2.4e-134	86.83	Engulfment/cell motility, ELMO OS=Corchorus capsularis OX=210143 GN=CCACVL1_1937...	[more]
tr\|A0A1R3K0X9\|A0A1R3K0X9_9ROSI	2.4e-134	86.83	Engulfment/cell motility, ELMO OS=Corchorus olitorius OX=93759 GN=COLO4_12395 PE...	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **INTERPRO**
Term	Definition
IPR006816	ELMO_dom

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
Carg04978	Carg04978	gene

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
Carg04978-RA	Carg04978-RA-protein	polypeptide

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04978-RA.exon.1	Carg04978-RA.exon.1	exon
Carg04978-RA.exon.2	Carg04978-RA.exon.2	exon
Carg04978-RA.exon.3	Carg04978-RA.exon.3	exon
Carg04978-RA.exon.4	Carg04978-RA.exon.4	exon
Carg04978-RA.exon.5	Carg04978-RA.exon.5	exon
Carg04978-RA.exon.6	Carg04978-RA.exon.6	exon
Carg04978-RA.exon.7	Carg04978-RA.exon.7	exon
Carg04978-RA.exon.8	Carg04978-RA.exon.8	exon
Carg04978-RA.exon.9	Carg04978-RA.exon.9	exon
Carg04978-RA.exon.10	Carg04978-RA.exon.10	exon
Carg04978-RA.exon.11	Carg04978-RA.exon.11	exon

The following five_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04978-RA.five_prime_UTR.1	Carg04978-RA.five_prime_UTR.1	five_prime_UTR
Carg04978-RA.five_prime_UTR.2	Carg04978-RA.five_prime_UTR.2	five_prime_UTR

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04978-RA.CDS.1	Carg04978-RA.CDS.1	CDS
Carg04978-RA.CDS.2	Carg04978-RA.CDS.2	CDS
Carg04978-RA.CDS.3	Carg04978-RA.CDS.3	CDS
Carg04978-RA.CDS.4	Carg04978-RA.CDS.4	CDS
Carg04978-RA.CDS.5	Carg04978-RA.CDS.5	CDS
Carg04978-RA.CDS.6	Carg04978-RA.CDS.6	CDS
Carg04978-RA.CDS.7	Carg04978-RA.CDS.7	CDS
Carg04978-RA.CDS.8	Carg04978-RA.CDS.8	CDS
Carg04978-RA.CDS.9	Carg04978-RA.CDS.9	CDS
Carg04978-RA.CDS.10	Carg04978-RA.CDS.10	CDS

The following three_prime_UTR feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
Carg04978-RA.three_prime_UTR.1	Carg04978-RA.three_prime_UTR.1	three_prime_UTR

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006816	ELMO domain	PFAM	PF04727	ELMO_CED12	coord: 86..251 e-value: 1.8E-50 score: 171.4
IPR006816	ELMO domain	PROSITE	PS51335	ELMO	coord: 101..262 score: 30.92
None	No IPR available	PANTHER	PTHR12771	ENGULFMENT AND CELL MOTILITY	coord: 1..280
None	No IPR available	PANTHER	PTHR12771:SF20	ELMO/CED-12 DOMAIN-CONTAINING PROTEIN	coord: 1..280