Carg04978 (gene) Silver-seed gourd | Cucurbit Genomics Database (CuGenDB)

Overview


Name	Carg04978
Type	gene
Organism	Cucurbita argyrosperma (Silver-seed gourd)
Description	ELMO domain-containing protein A
Location	Cucurbita_argyrosperma_scaffold_060 : 609500 .. 615594 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAGGTGCTTTTTGAAACGGCTGAAGAAGAGGAAGATAATAGAATTGGGAATCCATACACATTCTCATTACGAACAACCTCTCAACCAACTTCCATGGACTCTCAGTCTCAGATCTTGCTCCAGCCCTAGCCGCTTTCCAGGTTCCTATTCCTTTTCCTTTTTCTCTTCTTTGATTCTTCGTTTTTTGTTTTCTCTCCTTGGTATCCATCAACGCCCCATTCTCGCCGCCGTTTTTTCCTCCTTTGATTGTATCGTTTGTTGTTTCTGATTGCCGTGATTGTGCTCTATTGGTGTACTGCTTTCGGATCCTGTTTGCTTCTTTCTTTCCTTATGCATTTTGAGTCTTTTTTGCTTTATCATTGATTTCTGTGATTCTGGATTTTGTTTCTTCTAATGCTATAATTCTGATTGTGGTGGATGAATGTCCATTTCCAGAGGTTTTATTGTGTGGATAAGGTGTGGGAGCTTGCTGTGGTGCTGGTGATGGATGTGGTGGAGTGACGGACAGAGGAGGCGGGGTGAGGGAGATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGTGAATATTATCTTTAATGTCCGCTTCTCTCTCTCTCTCTCTCTCTACTGTTATTTACATTAAAATTAGAATTTTCGTCCTCGCTTTTCTTTCGCTGAAAAGTTTTCTCTCTTTTGCTCTCTCTCTTCTTCTTTTTTTTTTCTTTAATAAAAAAAAAAAAAATCTTATTCATAATTCATGTTTTACTTTTTGGTTTAGAATTTTAGATCTATGTCTTGAAGTTGAGTAATGTGCGGTAAGCTCTGCTTATACTGAGGCTCGTACTGGTTTCATGATTGCTGAGTTTCAAATCTGTATCGGTGGGTCTACTCAGTGGGATTTTTTTTCTTATAAATTTAAAAGTTTAATTTAAGTTTTTTCAACTCCCTTCCGACTCTTCCTTCATCGTATGTATTATTTGTGATCTAGTACCAGAAGTTTGTGATTTTGATATTCGTATTTTAAATATTTTTTTATTGCGTTGTACGTCGTCAACTGAAATTTGTGGAAGCTATAGATCTTTCTGGCAGAAATCATGAAGCTCATTAATTAACCACGTTTCTGTCTGATTAGATTATTATTTTCTCCGATGTACGGTTGATTGTTGGATGAACGTGATGGCAGGACTCAAGCTTGCCTTAGTTGCTTGACATAACTCAAATTCCTTTTTGTAGTTTGCGTGTTTTCTTCGTTGATGGCGTTGTCTCTACTGCATATTCTAATTATTGACTGTGCTATATAGTAAATATAAAATTTATTTTAATTTTCTTAGTGTGCCATATAGAATGTTGTTTTTTGCTTGTGGGAGAAATATTCTGCAATTACTATCGGTGTCTTTGGAATTAGTCAAGATCTCTCCCCACTTTTACTCAATACTTTCCCCTGTTTTTTAATTGACTGTTGTGTGAAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGAGTAAGGAAGAAAAAGTGTAAGGATCATCAAATCTTCTTTGTGGTACATTAGTCCTCTCAGTATGTGTTATGTGCTGTTAATTGTTTTGCAAACTTGGGGGTTTTTTTCTAGCATAAACAGGCAAATAGCTCTCTCCACCTTATCATGTGTGTTAATATGACAATATTCTCTACTTTTCTTTGTTTCCATTTTTAATTGTGCTTTGCTGCGGGAAACTATTTTCCTTATCTTTATCTAATATCTTTTCCATTTTAGGATCCTCATAGTCAGTTGTCAGAAACTTGTACTGGCTGCCCTTTCATGAATCATGACTTTTCATGGAACTTCTGAAAGACATTCTTTTACCATATATTCAAGCTCGGGTAACCATGAATTAGCTGGATAGCAAATAGCAAGGGGATTAAGTTCAATAGCATATGCTTGAACTTTTGCTTGTCTATATTTTTATGATATACTTTCAAATGGCTGTCTACAGGATTAGAGGACTTCGTAATTGATAGATTGATTGCCGATGTGCTTTTGCTTTATTTCAGCTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGTAACTTTATGCATTTGGTGATTGTTAGCTTCAATTTCCATTGAACGGGAAGAAGCCTCATTATAACTATTATTTTGATTCGAAGTGTTTGGAAGCTGAGCAATAGATGGAGCTGAGCGATAGATGGGTGACTTGACTAAAACAAGGGAAGGTGATAGTTAAAAGTAAGGTCTTGAAAGTGGAGATGAGAGGGTGATTCAGCTTAAACAAAGAAAGGTGAGCGTGACAGTGGAGAGGCAGATCTAGGATGAGGGAGGATGGGGGCGGATTGATAGTTGTAGGGAGATAATTTAGAGTGTAGAAATGTTGCTGAACTAAAAAAAAATTGATAATAGTTGAATGGTCGAGTGGTTGTATGAGTTGGAGATGAGCAATAGATGGGTGACTTGACTAAAACAAGGGAAGGTGATAGTTAAAAGTGAGGTCTTGAAAGTGGAGACGAGGTGAGTGTGTGACAGTGAGAGGCAGATCTAGGAAGTGGGAGGATGGGGGCGGATCGGATGGTTGTATGGAGATCTAGAGAATAAAAATGAAGGGGAAAACTGGGGGGGGGGACTTAGTAAGAGGGAGATATGGAGATGAGGGGTGACTTGGATAGTGAACGAGGTTTGGTTTGGTGGTGCAAGGGTGGTTTAGAGAGTGAAAAAGGAGACAAGGTCGAGGGCTTGGGTGGCTAAAAGCAAAACAAGGAAAAATAAACTGAAGAATTTTTCTTGCTAAAGAAATTATTATCTTAAATAGTAGCAATAAGTACCAGGTAAGTAGAATCTTGAGAAAATTTAAACTCCTTGCTAGAAGAGAACAAATTGTATTAAGAAGTTGTCGCATGCAGAGCTTTACTTTTGTTCTTCTTCTTAAGATCATTTTTTATTAACTGTTTTAGTTAGAATTTGTATCTCAAAATCATAGCACATGTTGGTTCTTTTACTAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGTTTGTTATCTACACAACGTTTTTTGTCCTTCTATAAGATGTAAAAAAATGTAGGGAGATTGTGTGTGTGTGTCTTGTGGAGGGAGAATTTGAGACTATTTTGTTTAGTTTTTCTCCTTTATGATGATTTGGACTCTTAATAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGTAATCAGATTTACGTCGTTGCTTCATACTTGACATGAATAGCTCTTATAATTTATTACCAACGTTATTGCTGTGTTAACTCTTATTAATTGGGTTTTATCTCTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGGTATGAAACTTTTTTTTTACCTTGCTTTAAACTTCTTTGAGCCTTGATTAGTTTCCTTTTGGGAAAAAAAAAAAAAAAGAAAAAAAAGCTTAAAAACAAGGTTATTAAATGGAAATCAAACATACTGATTTTGACAGAGGAACCCAGATTATTATTACTTCATGAGTGTATGCATGTGAATATTTTACAAAAAAGAAAAAAAAAAGATATTAATGTGGTCGGTTTATGCATAAACAACGCATTTATGCTTCTAGTTGCTGTCTTTTAACACTAAAGTTTCTGGACATCATTACAGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGGTTTGCTATCTATATTAATCAATCTATTCAACGGAAAAATAGTGTTCTTTTATTCAGAAATCTAGGGTCCTAACTTGTGGAAATGCCATGAAATGATATTTTCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGGTATGTGCAACCACCTTATTGAATGTATGAATAAATATTTTATGAAAATCATGCTTATTAAGTGAGCTATTTTCCTGCTTGTGATTTCTGCGTTACAAACATACTTTACAATTGGGTATAGGAAATCTTCTTAGATGATTTCATAATATCATGTAGAATTTTACATGTGGAACAAGCTCATCTCTCTTCTTTTCTCTTTTTTTTTTTTTTTTTTTTTTTTTTCTTTTTTTTTAATTTTTATATTTGCTAATCCAAGTTTTGCCCTTTTCCTGACAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATGTATGTAGTCTCAACTCAATTTTTTCTTGAAATTGTCAAATTTATTGACTTAACATCTAAACTGGCTATACTGTTTTATATGCACTCACTAGTCATACCGAGCTATGAAAATACATTGAATCAAGATCCTTTCGAACTTTGGGTTAAGACTCTTCGAATCAAATTAAGACCTGTCTTAATGCATTCAACTTTGCCACTCCTTCCCATATAAATGTTGGGCATTGTGATCCGTGTAAACATACTGTTAGGCCACCATTTATAGCATTTTATCAAAGGAAGGGCAAGAAAGACAATTTAGCCTCGACCAGTTAGTTACTGGTCAGTTATGTGGGAGTGAGTGTCGGGTGTGCAAGGGGATAGCTGCTGTGTAAGGGGGTTATAAAGTGCATTTTGGTTTTAGCTAGTGGCATTTAGCTTTTCATTCGATTGTTTTTCATTTTTAGTCTTTTGGTTAATTGTCTAAAAGAGGATATGGAACTTGTATTGATCTTTGATTCCCAATTGATAGTTCCCCTAACCTTACAAATTGGTATCAAAGCAACTCGCCCAAGGGAGATTTGGAAAGATGAATCAAAAGAGGATTGAAGAAAAAGGATTGGAGTAGACAAGGAAATAGTGGAATTAAAATTAGAAATCATATTCAAGGGAAGGTGATGGGGTTTCCTGCAATCGAGGAGTCTTTGACGACACTCATGGCCCCTGCGCAAGCATGACATGCACAAATCAAGAAATGGTCCAAAATTTTTAAAGAGGACAATATTGACCAGTGATGGGCTTGAGCTATTACAAATGGTATGAGAGCCAGACATCAGACAGTGTGCGAGCGAGGATGCTGGACTCCTAAGGGGGTCGGAGAGGAGAACAAAACATTGCTTATAAGGGTGTGGAAACCTCTTCCTAGTAGACACATATTAAAACCTTGAGGGGAAGTCCAGGGGAGAAAGTCCAAAGAGTACAATATCTGCGAGTGGTGGACTTAGACTAGAGTTGTGGAAAGCTTGAGGAAAGAATTTTCCAACGGCCGGATTAAGTTCAATAAGGTCGAAATGCCGGTGTTAGGAGGAAGGGTCCTTGTCCGTGGCTTGTTTGAGCAGACAGGTTGTTCATTCTAGGCTTAAGTTGTCTGAGAGGGAAGGAAAGGAACTTATATTACCTTGGGGCAAACTTATACTTCCTTACGCACAATTCAATGTTAAATTTTAAATTTAGGCCCGGCTAATGTCTAAATTTGAGCATACCTTAAATGGTCAAGACATTATATTTGTCCTAAACCTCAATATTTCAGTTTTTACTCATACCACGACTGACGTTTCATGATTTTCCTCTCTTTTGTAGACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAGTTCGTTTACCGACCAAACACCTCATTTTCTAATGGAAAATAGCTTGTGGTATCGTCTTCAATAGCTTTTAACTAGATAGAGGTTTTTTTTTTTTTTTTGTACATGATT

mRNA sequence

AAAGGTGCTTTTTGAAACGGCTGAAGAAGAGGAAGATAATAGAATTGGGAATCCATACACATTCTCATTACGAACAACCTCTCAACCAACTTCCATGGACTCTCAGTCTCAGATCTTGCTCCAGCCCTAGCCGCTTTCCAGAGGTTTTATTGTGTGGATAAGGTGTGGGAGCTTGCTGTGGTGCTGGTGATGGATGTGGTGGAGTGACGGACAGAGGAGGCGGGGTGAGGGAGATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGACTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAGTTCGTTTACCGACCAAACACCTCATTTTCTAATGGAAAATAGCTTGTGGTATCGTCTTCAATAGCTTTTAACTAGATAGAGGTTTTTTTTTTTTTTTTGTACATGATT

Coding sequence (CDS)

ATGGACGATAGAGGTGGTGGATCGTTTGTTGCTGTTAGGAGGATTTCTCAAGGTCTGGAGCGAGGAAATACTTGTCACTCGACTTCAGGGAGATATTCCCAAGTAATTGCATTCCATGTTCTAATCACGACTGAGGTTGTGGCAGGATCAGCTGCATGGCTTGGCCGGGGTCTTTCTTGCGTTTGCGCACAGAGAAGAGAAAGTGATGCACGTCCATCATTTGACTTAACTCCTGCACAGGAGGAATGCTTGCAGACGCTGCAGAACCGCATAGATATTGCCTATGATAATTCAATCCCTGAGCACCAGGAGGCTCTAAGGGCTCTATGGAATGTGGCATTCCCAGAGGAAGAACTTCGTGGTTTGATATCTGAGCAGTGGAAGGAAATGGGCTGGCAAGGAAAGGATCCATCAACAGATTTTAGGGGTGGTGGTTTTATTTCATTGGAGAACTTATTGTTCTTTGCCAGGAATTTCCCGAAGTCGTTCCAAGATCTCCTTCGAAAGCAAGTAGGAGATCGGTCTTTATGGGAATACCCATTTGCTGTAGCTGGGGTGAACATCACATTCATGCTTATTCAAATGCTTGATCTTGAAGCAGTCAAGCCACGGACACTTGTGGGAGCAACATTCTTGAAGTTTCTTGCAGAAAACGATTCGGCATTTGACCTCCTTTATTGTATCACGTTCAAACTAATGGATCGTGAATGGCTTGCCATGCATGCATCATATATGGACTTCAATACTGTAATGAAAGCGACACGACGACAATTGGAAAAAGAGCTACTAATGGAGGATATTTCAAGGCTCGAAGAACTACCTTCATACGACCTTCTCGATCAATAG

Protein sequence

MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ

Homology

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BLAST of Carg04978 vs. NCBI nr
Match: XP_022960492.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita moschata])

HSP 1 Score: 530.4 bits (1365), Expect = 3.7e-147
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 267

[Close]

BLAST of Carg04978 vs. NCBI nr
Match: XP_023515309.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 530.4 bits (1365), Expect = 3.7e-147
Identity = 266/281 (94.66%), Postives = 266/281 (94.66%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 4   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 63

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 64  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 123

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP
Sbjct: 124 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 183

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 184 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 243

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 244 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 270

[Close]

BLAST of Carg04978 vs. NCBI nr
Match: XP_023004750.1 (ELMO domain-containing protein A-like isoform X1 [Cucurbita maxima])

HSP 1 Score: 528.1 bits (1359), Expect = 1.8e-146
Identity = 265/281 (94.31%), Postives = 265/281 (94.31%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 267

[Close]

BLAST of Carg04978 vs. NCBI nr
Match: XP_008459793.1 (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo])

HSP 1 Score: 508.4 bits (1308), Expect = 1.5e-140
Identity = 255/281 (90.75%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQ LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978 vs. NCBI nr
Match: XP_004140510.1 (PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis sativus] >KGN46512.1 hypothetical protein Csa_6G105170 [Cucumis sativus])

HSP 1 Score: 505.8 bits (1301), Expect = 9.7e-140
Identity = 254/281 (90.39%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECL  LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978 vs. TAIR10
Match: AT2G44770.1 (ELMO/CED-12 family protein)

HSP 1 Score: 446.4 bits (1147), Expect = 1.3e-125
Identity = 220/281 (78.29%), Postives = 248/281 (88.26%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR  GSFVAVRRISQGLERG+  +S+S               E V GSAAWLGRGLSC
Sbjct: 1   MDDR-EGSFVAVRRISQGLERGSVYNSSS--------------AEAVPGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRR+SDA  +FDLTPAQEECLQ+LQNRID+AYD++IP HQEALR LW ++FPEEEL 
Sbjct: 61  VCAQRRDSDANSTFDLTPAQEECLQSLQNRIDVAYDSTIPLHQEALRELWKLSFPEEELH 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLL+FARNF KSFQDLLRKQVGDRS+WEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLYFARNFQKSFQDLLRKQVGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAG+N+TFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCI FKLMD++WL+M
Sbjct: 181 FAVAGINLTFMLIQMLDLEAVKPRTIVGATFLKFLSENESAFDLLYCIAFKLMDQQWLSM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYM+FNTVMK+TRRQLE+EL++EDI  LE+LPSY LL+Q
Sbjct: 241 RASYMEFNTVMKSTRRQLERELMLEDIMHLEDLPSYALLNQ 266

[Close]

BLAST of Carg04978 vs. TAIR10
Match: AT3G60260.1 (ELMO/CED-12 family protein)

HSP 1 Score: 441.0 bits (1133), Expect = 5.3e-124
Identity = 214/281 (76.16%), Postives = 245/281 (87.19%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERG+  HS+S               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGSVYHSSS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VC Q R+ D RPSFDLTPAQEECLQ LQ+RID+AYD+SIP+HQEAL+ LW +AFPEEEL 
Sbjct: 61  VCVQGRDGDPRPSFDLTPAQEECLQRLQSRIDVAYDSSIPQHQEALKDLWKLAFPEEELH 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           G++S+QWKEMGWQGKDPSTDFRGGGFISLENLL+FAR FPKSF  LLRKQVGDRS+WEYP
Sbjct: 121 GIVSDQWKEMGWQGKDPSTDFRGGGFISLENLLYFARKFPKSFHGLLRKQVGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAG+NITFMLIQMLDLEAVKPR++VG TFL+FL+ N+SAFDLLYCI FKLMD++WL+M
Sbjct: 181 FAVAGINITFMLIQMLDLEAVKPRSIVGETFLRFLSVNESAFDLLYCIAFKLMDQQWLSM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYM+FNTVMK+TRRQLE+E+++EDI+ LE+LPSY LL Q
Sbjct: 241 RASYMEFNTVMKSTRRQLEREIMIEDITSLEDLPSYSLLSQ 266

[Close]

BLAST of Carg04978 vs. TAIR10
Match: AT1G67400.1 (ELMO/CED-12 family protein)

HSP 1 Score: 289.7 bits (740), Expect = 2.0e-78
Identity = 140/260 (53.85%), Postives = 188/260 (72.31%), Query Frame = 0


Query: 21  RGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAW-LGRGLSCVCAQRRESDARPSFDLTPA 80
           RG   HS     S     +        + + +W + + L+CVC  R+ +  R   +LTP 
Sbjct: 21  RGCEAHSDDVSASSAGLINADAEDASCSSTPSWRIKKSLTCVCFNRKRAYERICSNLTPL 80

Query: 81  QEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPST 140
           QEE L+ L+ R+   YD S P+HQ+ALRALW+  +P+E+L+ LIS+QWK MGWQGKDPST
Sbjct: 81  QEERLKRLRKRMKNYYDASRPDHQDALRALWSATYPDEKLQDLISDQWKNMGWQGKDPST 140

Query: 141 DFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLE 200
           DFRG GFISLENLLFFA+ F  SFQ LL KQ G R+ WEYPFAVAGVNITFM++QMLDLE
Sbjct: 141 DFRGAGFISLENLLFFAKTFSTSFQRLLNKQGGKRAAWEYPFAVAGVNITFMIMQMLDLE 200

Query: 201 AVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLE 260
           A KPR+ +   FL+ L+E++ AFDLLYC+ F +MD++WL  +A+YM+FN V++ TR QLE
Sbjct: 201 ASKPRSFIRLVFLQMLSESEWAFDLLYCVAFVVMDKQWLDKNATYMEFNDVLRCTRGQLE 260

Query: 261 KELLMEDISRLEELPSYDLL 280
           +EL+M+D+ R+E++PS+ LL
Sbjct: 261 RELMMDDVFRIEDMPSFSLL 280

[Close]

BLAST of Carg04978 vs. TAIR10
Match: AT1G03620.1 (ELMO/CED-12 family protein)

HSP 1 Score: 286.2 bits (731), Expect = 2.2e-77
Identity = 138/242 (57.02%), Postives = 181/242 (74.79%), Query Frame = 0


Query: 41  LITTEVVAGSAAWLGRGLSCVCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIP 100
           ++T   + G+ +W+G          R  D    + L+P QEE LQ LQ+R+ + +D + P
Sbjct: 27  VVTATGMVGTRSWIG---GLFTRSNRRQDKAVDYTLSPLQEERLQRLQDRMVVPFDETRP 86

Query: 101 EHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFP 160
           +HQE+L+ALWNVAFP   L GL++EQWKEMGWQG +PSTDFRG GFI+LENLLF AR +P
Sbjct: 87  DHQESLKALWNVAFPNVHLTGLVTEQWKEMGWQGPNPSTDFRGCGFIALENLLFSARTYP 146

Query: 161 KSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLE-AVKPRTLVGATFLKFLAEND 220
             F+ LL KQ GDR+ WEYPFAVAG+NI+FMLIQMLDL+   KP+ L G  FLK L E++
Sbjct: 147 VCFRRLLLKQRGDRAKWEYPFAVAGINISFMLIQMLDLQNNPKPKCLPGMNFLKLLEEDE 206

Query: 221 SAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLL 280
            AFD+LYCI F +MD +WLAMHASYM+FN V++ATR QLE+EL ++DI R+++LP+Y+LL
Sbjct: 207 RAFDVLYCIAFAMMDAQWLAMHASYMEFNEVLQATRNQLERELSLDDIHRIQDLPAYNLL 265

Query: 281 DQ 282
            Q
Sbjct: 267 FQ 265

[Close]

BLAST of Carg04978 vs. TAIR10
Match: AT3G03610.1 (ELMO/CED-12 family protein)

HSP 1 Score: 271.6 bits (693), Expect = 5.6e-73
Identity = 137/250 (54.80%), Postives = 183/250 (73.20%), Query Frame = 0


Query: 32  YSQVIAFHVLITTEVVAGSAAWLGRGLSCVCAQRRESDAR--PSFDLTPAQEECLQTLQN 91
           +SQ+IA       ++V GS + +GR LS     +  +  R  P   L+  QEE L+ ++ 
Sbjct: 73  FSQLIAQWAQWIAKIVFGSGSLVGRFLSLPTFGQIGTGGRLLPP-PLSMLQEERLRNIKR 132

Query: 92  RIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISL 151
           RI+I +D S  EHQ+ALR LW +A+P+ EL  L SE WKEMGWQG DPSTDFRGGG+ISL
Sbjct: 133 RIEIPFDGSRMEHQDALRQLWRLAYPQRELPPLKSELWKEMGWQGTDPSTDFRGGGYISL 192

Query: 152 ENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTLVGA 211
           ENL+FFA+ +P+SFQ LL KQ G R+ WEYPFAVAG+NI+FML QMLDL++ KP T+ G 
Sbjct: 193 ENLIFFAKTYPESFQRLLHKQDGTRAEWEYPFAVAGINISFMLAQMLDLQSGKPSTIAGI 252

Query: 212 TFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMKATRRQLEKELLMEDISR 271
            FL FL E++ AFD LYCI F++MD +WLA  ASYM+FN V+K+TR QLE+EL ++D+S 
Sbjct: 253 RFLGFLEEDEMAFDNLYCIAFQMMDAQWLARRASYMEFNDVLKSTRAQLERELALDDVSS 312

Query: 272 LEELPSYDLL 280
           + +LP+++LL
Sbjct: 313 ITDLPAFNLL 321

[Close]

BLAST of Carg04978 vs. Swiss-Prot
Match: sp|Q54YW1|ELMOA_DICDI (ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA PE=1 SV=1)

HSP 1 Score: 119.8 bits (299), Expect = 4.9e-26
Identity = 62/194 (31.96%), Postives = 100/194 (51.55%), Query Frame = 0


Query: 80  QEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPST 139
           Q    Q + NR ++ ++    EH   L  LW++ +P  +L   +SEQWK+MG+QG DP T
Sbjct: 362 QRHRFQVITNRKNVTFNKESSEHDALLMKLWSLTYPGVKLESRVSEQWKQMGFQGTDPCT 421

Query: 140 DFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFML---IQML 199
           DFR  G   L+NL++FA+N+ + F+ ++  Q+ DR   EYP A AG+ +TF L   I  +
Sbjct: 422 DFRAMGIWGLDNLIYFAQNYNEKFRKIVNSQI-DRKEREYPTATAGIVLTFELYNSIFKM 481

Query: 200 DLEAVKP---------------RTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAMH 256
               + P                 +    F      +  AF+ +YC TF+++D  W  M+
Sbjct: 482 GTPNLNPYNSXXXXXXXXXXXXXXIDDLPFFPLFFSHPHAFEEVYCTTFQILDSTWDDMN 541

[Close]

BLAST of Carg04978 vs. Swiss-Prot
Match: sp|Q54RS7|ELMOC_DICDI (ELMO domain-containing protein C OS=Dictyostelium discoideum OX=44689 GN=elmoC PE=4 SV=1)

HSP 1 Score: 109.8 bits (273), Expect = 5.1e-23
Identity = 62/194 (31.96%), Postives = 110/194 (56.70%), Query Frame = 0


Query: 76  LTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGK 135
           +T  Q + ++ L  +    Y+++ P+H+E L+ LW++ +PE+E +   S  WK+ G+Q  
Sbjct: 357 VTAKQSQTIKILFQKKSTIYESTNPDHEEYLKHLWSLLYPEQEFQKK-SPLWKKFGFQSD 416

Query: 136 DPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQM 195
           DP+ DFRG G + L NL+   ++     Q++L +   DR   +YPFAVAG+NI+ ++ ++
Sbjct: 417 DPTRDFRGMGIMGLLNLIHLVQHHNDWVQEILAQ---DR---DYPFAVAGINISNLIFEV 476

Query: 196 L-----DLEAVKPRTLVGATFLKFLA----ENDSAFDLLYCITFKLMDREWLAMHASYMD 255
                  L+     +   ++++  L      ND AF+ LY + F L+D  W+ M+A+YM 
Sbjct: 477 FQISEDSLQQPWYSSFWSSSYMAMLCSMSRHNDHAFEELYFLIFNLLDHLWIQMNATYMM 536

Query: 256 FNTVMKATRRQLEK 261
           F  V+K  + QL +
Sbjct: 537 FPLVIKKLKSQLNE 543

[Close]

BLAST of Carg04978 vs. Swiss-Prot
Match: sp|Q54VR8|ELMOB_DICDI (ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB PE=4 SV=1)

HSP 1 Score: 100.5 bits (249), Expect = 3.1e-20
Identity = 55/172 (31.98%), Postives = 95/172 (55.23%), Query Frame = 0


Query: 85  QTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGG 144
           ++++ +  I YDN+  EH+ +L  LW    P+      +S++W  +G+QG DP+TDFRG 
Sbjct: 108 KSIEKKQKIPYDNNNLEHEASLERLWEALLPDVRRSARLSKEWGTLGFQGMDPATDFRGM 167

Query: 145 GFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPR 204
           G + L+NL++F+    +  +++L+      S   YPFA+ G+NIT +++ ++D    KP 
Sbjct: 168 GILGLDNLIYFSTQHSEDAREILK---NSNSKCCYPFAITGINITALVLNLID----KPH 227

Query: 205 TLVGATFLKFLAENDSA---FDLLYCITFKLMDREWLAMH-ASYMDFNTVMK 253
                 F  +  +N S    F+ LY + F   DR + +    S M+FNT+ K
Sbjct: 228 ------FKIYFFKNGSTLTQFNELYSLVFISFDRFYQSKKPKSIMEFNTIKK 266

[Close]

BLAST of Carg04978 vs. Swiss-Prot
Match: sp|Q8IZ81|ELMD2_HUMAN (ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1)

HSP 1 Score: 93.2 bits (230), Expect = 4.9e-18
Identity = 42/108 (38.89%), Postives = 65/108 (60.19%), Query Frame = 0


Query: 95  YDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 154
           YD+   +H+E L  LWN+  P ++L   IS+QW E+G+QG DP TDFRG G + L NL++
Sbjct: 120 YDSDNLQHEELLMKLWNLLMPTKKLNARISKQWAEIGFQGDDPKTDFRGMGILGLINLVY 179

Query: 155 FARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVK 203
           F+ N+      +L +   +     Y +A+ G+N+T M   +L  EA+K
Sbjct: 180 FSENYTSEAHQILSR--SNHPKLGYSYAIVGINLTEMAYSLLKSEALK 225

[Close]

BLAST of Carg04978 vs. Swiss-Prot
Match: sp|Q54UP9|ELMOD_DICDI (Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum OX=44689 GN=elmoD PE=4 SV=1)

HSP 1 Score: 90.5 bits (223), Expect = 3.2e-17
Identity = 50/164 (30.49%), Postives = 84/164 (51.22%), Query Frame = 0


Query: 95  YDNSIPEHQEALRALWNVAFPEEELRGLISEQWKEMGWQGKDPSTDFRGGGFISLENLLF 154
           Y+   P HQ  L  LW+  FP +  +    E W+ +G+Q KDPS+DFRG G   L++L++
Sbjct: 301 YNKDEPSHQRLLETLWSTLFPNQVFQ-RSHENWQIIGFQNKDPSSDFRGMGLAGLKHLIY 360

Query: 155 FARNFPKSFQDLLRKQVGDRSLWEYPFAVAGVNITFMLIQMLDLEAVKPRTL------VG 214
            A+N    F + L  +  + +   YP+A +G+ +T  L+     E VKP  +      V 
Sbjct: 361 LAQNHKDMFMNPLINRQPEANY--YPYATSGIQVTSFLV-----ECVKPINISANHSDVI 420

Query: 215 ATFLKFLAENDSAFDLLYCITFKLMDREWLAMHASYMDFNTVMK 253
                 L E+++A + +YC+  ++    W   +A+YM F  V +
Sbjct: 421 GQIYPILFESENALNEIYCVLMEIFGIVWKDWNATYMIFQKVFQ 456

[Close]

BLAST of Carg04978 vs. TrEMBL
Match: tr|A0A1S3CBG7|A0A1S3CBG7_CUCME (ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498817 PE=4 SV=1)

HSP 1 Score: 508.4 bits (1308), Expect = 9.9e-141
Identity = 255/281 (90.75%), Postives = 260/281 (92.53%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECLQ LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLQRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978 vs. TrEMBL
Match: tr|A0A0A0KDT2|A0A0A0KDT2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 SV=1)

HSP 1 Score: 505.8 bits (1301), Expect = 6.4e-140
Identity = 254/281 (90.39%), Postives = 259/281 (92.17%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDRGGGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQEECL  LQNRIDIAYD+SI EHQEALR LWNVAFPEEELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEECLLRLQNRIDIAYDSSITEHQEALRTLWNVAFPEEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFA+NFPKSFQDLLRKQ GDRSLWEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAKNFPKSFQDLLRKQEGDRSLWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMD EWLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDHEWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
           HASYMDFNTVMKATRRQLEKELL+EDISRLEELPSY LL++
Sbjct: 241 HASYMDFNTVMKATRRQLEKELLIEDISRLEELPSYGLLNR 267

[Close]

BLAST of Carg04978 vs. TrEMBL
Match: tr|A0A061DUL3|A0A061DUL3_THECC (ELMO/CED-12 family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005729 PE=4 SV=1)

HSP 1 Score: 488.0 bits (1255), Expect = 1.4e-134
Identity = 243/279 (87.10%), Postives = 256/279 (91.76%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+SIPEHQ ALRALWN AFPEE+LR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSIPEHQNALRALWNAAFPEEQLR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
           GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFAR+FPKSFQDLLRKQ GDRS+WEYP
Sbjct: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARSFPKSFQDLLRKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRT+VGATFLKFL+EN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTMVGATFLKFLSENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLL 280
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLE+LPSY LL
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEDLPSYSLL 264

[Close]

BLAST of Carg04978 vs. TrEMBL
Match: tr|A0A1R3HH59|A0A1R3HH59_COCAP (Engulfment/cell motility, ELMO OS=Corchorus capsularis OX=210143 GN=CCACVL1_19375 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.4e-134
Identity = 244/281 (86.83%), Postives = 256/281 (91.10%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+S+PEHQEALRALWN AFP+EELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSLPEHQEALRALWNAAFPKEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
            LIS+QWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLL KQ GDRS+WEYP
Sbjct: 121 SLISDQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLWKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAEN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLEELPSY LL +
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEELPSYSLLSR 266

[Close]

BLAST of Carg04978 vs. TrEMBL
Match: tr|A0A1R3K0X9|A0A1R3K0X9_9ROSI (Engulfment/cell motility, ELMO OS=Corchorus olitorius OX=93759 GN=COLO4_12395 PE=4 SV=1)

HSP 1 Score: 487.3 bits (1253), Expect = 2.4e-134
Identity = 244/281 (86.83%), Postives = 256/281 (91.10%), Query Frame = 0


Query: 1   MDDRGGGSFVAVRRISQGLERGNTCHSTSGRYSQVIAFHVLITTEVVAGSAAWLGRGLSC 60
           MDDR GGSFVAVRRISQGLERGNTCHSTS               EVVAGSAAWLGRGLSC
Sbjct: 1   MDDR-GGSFVAVRRISQGLERGNTCHSTS--------------AEVVAGSAAWLGRGLSC 60

Query: 61  VCAQRRESDARPSFDLTPAQEECLQTLQNRIDIAYDNSIPEHQEALRALWNVAFPEEELR 120
           VCAQRRESDARPSFDLTPAQE+CLQ LQNRIDIAYD+S+PEHQEALRALWN AFP+EELR
Sbjct: 61  VCAQRRESDARPSFDLTPAQEDCLQRLQNRIDIAYDSSLPEHQEALRALWNAAFPKEELR 120

Query: 121 GLISEQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLRKQVGDRSLWEYP 180
            LIS+QWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLL KQ GDRS+WEYP
Sbjct: 121 SLISDQWKEMGWQGKDPSTDFRGGGFISLENLLFFARNFPKSFQDLLWKQEGDRSVWEYP 180

Query: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENDSAFDLLYCITFKLMDREWLAM 240
           FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAEN+SAFDLLYCITFKLMD +WLAM
Sbjct: 181 FAVAGVNITFMLIQMLDLEAVKPRTLVGATFLKFLAENESAFDLLYCITFKLMDHQWLAM 240

Query: 241 HASYMDFNTVMKATRRQLEKELLMEDISRLEELPSYDLLDQ 282
            ASYMDFNTVMKATRRQLE+ELL+EDI+RLEELPSY LL +
Sbjct: 241 RASYMDFNTVMKATRRQLERELLLEDITRLEELPSYSLLSR 266

The following BLAST results are available for this feature:

BLAST of Carg04978 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_022960492.1	3.7e-147	94.66	ELMO domain-containing protein A-like isoform X1 [Cucurbita moschata]	[more]
XP_023515309.1	3.7e-147	94.66	ELMO domain-containing protein A-like isoform X1 [Cucurbita pepo subsp. pepo]	[more]
XP_023004750.1	1.8e-146	94.31	ELMO domain-containing protein A-like isoform X1 [Cucurbita maxima]	[more]
XP_008459793.1	1.5e-140	90.75	PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis melo]	[more]
XP_004140510.1	9.7e-140	90.39	PREDICTED: ELMO domain-containing protein A-like isoform X1 [Cucumis sativus] >K...	[more]

BLAST of Carg04978 vs. TAIR10


Match Name	E-value	Identity	Description
AT2G44770.1	1.3e-125	78.29	ELMO/CED-12 family protein	[more]
AT3G60260.1	5.3e-124	76.16	ELMO/CED-12 family protein	[more]
AT1G67400.1	2.0e-78	53.85	ELMO/CED-12 family protein	[more]
AT1G03620.1	2.2e-77	57.02	ELMO/CED-12 family protein	[more]
AT3G03610.1	5.6e-73	54.80	ELMO/CED-12 family protein	[more]

BLAST of Carg04978 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q54YW1\|ELMOA_DICDI	4.9e-26	31.96	ELMO domain-containing protein A OS=Dictyostelium discoideum OX=44689 GN=elmoA P...	[more]
sp\|Q54RS7\|ELMOC_DICDI	5.1e-23	31.96	ELMO domain-containing protein C OS=Dictyostelium discoideum OX=44689 GN=elmoC P...	[more]
sp\|Q54VR8\|ELMOB_DICDI	3.1e-20	31.98	ELMO domain-containing protein B OS=Dictyostelium discoideum OX=44689 GN=elmoB P...	[more]
sp\|Q8IZ81\|ELMD2_HUMAN	4.9e-18	38.89	ELMO domain-containing protein 2 OS=Homo sapiens OX=9606 GN=ELMOD2 PE=1 SV=1	[more]
sp\|Q54UP9\|ELMOD_DICDI	3.2e-17	30.49	Ankyrin repeat and ELMO domain-containing protein D OS=Dictyostelium discoideum ...	[more]

BLAST of Carg04978 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3CBG7\|A0A1S3CBG7_CUCME	9.9e-141	90.75	ELMO domain-containing protein A-like isoform X1 OS=Cucumis melo OX=3656 GN=LOC1...	[more]
tr\|A0A0A0KDT2\|A0A0A0KDT2_CUCSA	6.4e-140	90.39	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G105170 PE=4 SV=1	[more]
tr\|A0A061DUL3\|A0A061DUL3_THECC	1.4e-134	87.10	ELMO/CED-12 family protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_005729 PE...	[more]
tr\|A0A1R3HH59\|A0A1R3HH59_COCAP	2.4e-134	86.83	Engulfment/cell motility, ELMO OS=Corchorus capsularis OX=210143 GN=CCACVL1_1937...	[more]
tr\|A0A1R3K0X9\|A0A1R3K0X9_9ROSI	2.4e-134	86.83	Engulfment/cell motility, ELMO OS=Corchorus olitorius OX=93759 GN=COLO4_12395 PE...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **INTERPRO**
Term	Definition
IPR006816	ELMO_dom

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
Carg04978-RA	Carg04978-RA	mRNA

InterPro

Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006816	ELMO domain	PFAM	PF04727	ELMO_CED12	coord: 86..251 e-value: 1.8E-50 score: 171.4
IPR006816	ELMO domain	PROSITE	PS51335	ELMO	coord: 101..262 score: 30.92
None	No IPR available	PANTHER	PTHR12771	ENGULFMENT AND CELL MOTILITY	coord: 1..280
None	No IPR available	PANTHER	PTHR12771:SF20	ELMO/CED-12 DOMAIN-CONTAINING PROTEIN	coord: 1..280

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
Carg04978	Cla006721	Watermelon (97103) v1	carwmB0082
Carg04978	Csa6G105170	Cucumber (Chinese Long) v2	carcuB0089
Carg04978	MELO3C022283	Melon (DHL92) v3.5.1	carmeB0080
Carg04978	ClCG06G002460	Watermelon (Charleston Gray)	carwcgB0083
Carg04978	CSPI06G08290	Wild cucumber (PI 183967)	carcpiB0093
Carg04978	Cucsa.121050	Cucumber (Gy14) v1	carcgyB0095
Carg04978	CmaCh08G001530	Cucurbita maxima (Rimu)	carcmaB0112
Carg04978	CmaCh17G005290	Cucurbita maxima (Rimu)	carcmaB0105
Carg04978	CmoCh17G005010	Cucurbita moschata (Rifu)	carcmoB0113
Carg04978	CmoCh08G001520	Cucurbita moschata (Rifu)	carcmoB0119
Carg04978	Lsi09G016900	Bottle gourd (USVL1VR-Ls)	carlsiB070
Carg04978	Cp4.1LG17g10550	Cucurbita pepo (Zucchini)	carcpeB0125
Carg04978	CsGy6G008370	Cucumber (Gy14) v2	carcgybB0089
Carg04978	MELO3C022283.2	Melon (DHL92) v3.6.1	carmedB0081
Carg04978	CsaV3_6G008670	Cucumber (Chinese Long) v3	carcucB0096
Carg04978	Cla97C06G111820	Watermelon (97103) v2	carwmbB0078
Carg04978	Bhi12G001988	Wax gourd	carwgoB0092

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
Carg04978	Silver-seed gourd	carcarB092
Carg04978	Cucurbita moschata (Rifu)	carcmoB0117
Carg04978	Cucurbita pepo (Zucchini)	carcpeB0117
Carg04978	Wild cucumber (PI 183967)	carcpiB0097
Carg04978	Cucumber (Chinese Long) v2	carcuB0093
Carg04978	Cucumber (Chinese Long) v3	carcucB0100
Carg04978	Wax gourd	carwgoB0093