Carg23363 (gene) Silver-seed gourd

Overview
NameCarg23363
Typegene
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionKH domain-containing protein
LocationCucurbita_argyrosperma_scaffold_165 : 181705 .. 188827 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
GTAACTACTAACTTTTTAACAAATGCGCTGACTGGTACATCTTGTTCTTGAAAATTGACATTTTTGGAGCAGAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAATATTCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAATGGATGGCCATCACGGTTTCAATCAGAAGTACGGATACTAACCATTAACATAACCTTACTGCCCATCTAATTTACTGTACATAAGAAGCATTGCTGACACAAACTTCTACATTTTTTTGCTAACTCATGGAATTTACTAATTGCACTTGGGGATAGCTTCTCTAATTAAAAAAATGAGACTTCGCTTTATTTTTCACTGATGCATTTTTTTCCCAGTCTTCTAGTTTTTTCAGCTTCTCTAATGTTTCTAACAAATTGGTTCTCCACCTTCAGCCATCTTGATAAATGGATTACAACGCCGATCAAATTCTGAGGAGCTTACTTACTTTTCTAATTTGTCTTTATGTATGTGACAAGTTCTATGTGTGAATAATTGATCTTACTTTTCTAATTTGACTTAAATGTTTTGTTTTTTAGTGCCAAGGGTTTAATATTCTAATATAGAGTGCTGACTCGTTAGTTAACTTTTGTTTATCCCTTGTCTATCTTGGTGAAGGGACTTTTCAAGAAACTTTACCTGTTTGCACACTTGGAATTTTGAAATACATAAATTAGTGGCCCCAAGAGTAATTTATGTCAGTATTAGCGCATTCATATGGTTGTCCAAGAGTAATTTATGCCTGTATTACTTTTCTAATTTGACTTAAATATTTTGTTTTTTAGTTACAAGGGTCTAATATTCTAATATAGAGTGCTGACTCGTTAGTTAACTTTTGTTTATCTCTTGTCTATCTTGGTGAAGGGACTTTTCAAGAAACTTTACCTCTTTGCACACATGGAATTTTGAAATACATAAATAAGTGGCCCCAAGAGTAATTTATGTCAGATTTAGCGCATTCATATGGTTGTCCAAGAGTGTGTCTTCATTAAGTGAAAAAAAAAAAAAAAAAAGTAGAGGAAAAGAAAAGAAAAGAAATATGCTACTTCAAGATCCACGACAACATTTGAATGGTTCTGGGATTCCTAGTATTCCCTTAAGCAACCTAAACATTATCATACTTTCTATGCATGATTATAATGTTCTCTCTCAAGGTATGCAGTGTTTTCAGTACTCTGCAGTTTCTCCCTGGATTGTTGTACTAGAATCTATGACTTTGATATATATTGTTTCTGAAAATATCCCATGTTCTTTACACCAAAGTTATGTTGGCTGTTAAACATATCTTGTGTAGGATGATTGCCTTCATGTTAATTTTCTGGTATGAACTCTATATGATGTTGTGTATGTAGATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATGTATGAATTAGCATTGTGTTTTGTGCCCTGTCTTTTTGTATGTTTCTTGATGAAATCTAATTGAACCTTTTTTTTTTTTTTTTGGATAGTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGTAATTTACTATAAATTTTCATTTTCATGTTATGTTTTTTGTCATGTTTTGGTTGTTAATCTATTCTATTATGCAGGGAAAAATTAGAAATTCTATGTCTAAAGTTTTAAGATGGTCACACTTTAGTCTTCGAACTTTTAATCGGATCAATTACACCCTCATTAAGAATGGTTGCAATGTCACTTTTCCATTTAAATAAATCAAATAACTTTTTTCACTATTTCTTTTAAGATTATTATTTTTACGGTGAAAATGTGTAGAAATCAGGCAAAGATGGAGAGAATTGTTGCAACCTAACTCCTATCTTTAAGTTTGGTAACCTTTCCATGAATTCTTTTTTAATAAACACGAAATGGAGGAAGGGAGAGATAGATACTCCACCCGTTTCTCCCCAGTTCTGTCTCTTGTATAACTTCTTCCCCCTATTTTTTATTTTCCCTGTCAATTCTCTTTGCCTCTCATGCCCCTATTCTCCCTTTTTTTTAACTTTATCTTCTTATTTATAAGACCCCCCATTTACCTCTCCTATTTCTTTAAACTTGTTGTATTTATTTGTTTTTGATAAATCACAAGAGACAGTTTAATATTTAATAGAACTATTTGTTAATGAAATGACAATCTTTTTCATTTTTACTTCATTAAATCTCAATTTCAATTAATTCTTTCAAATTAATTTGGACATTTTTTGTATTTGAGTTGTAGCAAATCTTATTTTATTATTTTCATTCTTGTCTCAAACCAATGATTTAAAGTTCTATGTCATACCTGCCTCTAGTATTGAGGAATAGAAACCTCATTTGACTTGTTCTTTGTACGTGACAAAGAACTTCATGATGAAATTTTGTTTTCATGATGTGGAAATTGAGTAGCTTAGATCATAATGGTTTATATATATATTTATATATAATTTTTATGTTTTCTTTAGGATGAGAGCATATTGAACTACTATGGGTTGGCCTAGTTTCACTAAGGGTCGTGTAAATAATAAAGGGCTTAGAGGAAATGAGTTCAAGTCATAGTAGCCACCCTCCTACGATTTAATATTCTATGACCTTGGTAACCAAATGTAGTAGGTTTAGTCGATTGTTTTGTGAGAAGGGTTAAGGTGTGTGAAAGCGAGCCTGAACACTCACAATTTTTTTTAAAAAAATAATTAGATTATATTGATTGAAAGAATAGAATGTGAATATGGATAAGTTTTAAGAGATATTTTTGGTTGAAATGGAGAAATGAGTGAATATGGACAAGTCTTAAGAGAACAATGGAAGCATTTGATTTCACTAGGGTTATCAATTTTTTGTTTACTATTATTATTACTACATTGAATAAGACCTGACAATACAAAAGTGGCGAACAAAAAAGAGCCCGACAATGAATCATTAAATTTACACAAGACTAAATCTCTTCCCAAGACTTCTCCACATGATTTGATTTTAGAAATCAATTTGCAGAAAGATCGATGTAGTAAATTATGTTGGTTATATCATGGACAAGTAACATTCACTGAAGGTGTTTTTTCATAAGAAGAAAATTTCACTATCATATGAAGTTTACCAAAGAAGGGTCAAGGATACCTATTGCACTGATGTTTAGTGTAAGAACCGTTTCAACATGATTAACAGGAAGTACAAGAATGAGAAGGCCAGGGTTCAGGTTCCCATGGGGGGTTTTTCTTGTCTTGGTCGTCTTGATGAATTGACTGAACCTTCTGTGTCCATGAAGAAACCCTCCTCTCCTCCCAGGGCTCTTCCTTTGCTTTTTTTGGAAGATACCTCCCCCTGGGGCTGTCATTGCGATGTCTAAAAAAAACTTGTGGTGGCAATGGACAAGGTTATTTTTGGAGGGATTACTTGGATATGGCAGCTAGAGCTGCAACAATAGCGCTGATGGAGGAAGATGAAGAGGAGACAGTGAGCAAAAAAAGACGTTAGGGGAAGGGATGGGTAGGTTGACAAGAGCAATTAAAAGGTTTTGGGAGGTGTATGAAAGAGTGGAGGTCGAGAAGATGCGGCAAATGGTGGAATTGGAGAAGCAAAGAATGCAATTTTCCAAGGAATTGGAGGTGCAATATATGCACACTTTTATGAGGACTCAGGTTCAGCTTAAGAGGATTCGGCGTGGAAAGAAGTTAACTCCCAATGATATCTAGTGGCAGTCGTGTGAAGGGAATAACAGGAATTTACATAAGAAGGGAGAGATTCCAATCCAAAGAGAGTTACAATAAACATCTCCAATTAGACAATAATGTAAAAAAGCTATAAGAATTGAAAGGTGTATGCATGATAAAGCTAGGAAGGTAATATATTAAAAAAAAAAAAAAACTATCAACAGATCTTTCCTTGTCATTGAAAATTCTCAAAAAAACTACATCTGTAGGACTTCTTTTCTCTGTTGTGGAAGGATGACCTGACAAAGTTCGACAAAGAATACTTTCGGGATCCTTTGGAAGGACCGTCAACCAATTGGAAACAAGAGTCTCTGCTTCCAAAATCTGCAGCAAAGAAACAAGAGAAGGTTATGTGTTCTTGGGATCCAGCTTCCTTTCCTTATAGCAAAAGGAACAGCAATGTGGAGACAAAAAATGCATTGAGTCATTTCGCATTGCAATTAATCAAAAAGTGTCGATAGCCTTGTGACTTAATCAAAGGTTTTCTTTTCTACCTGGGAAGTGGGTGACAAAAATGATATGGTATAAGATCGTGAGGGAAAAAGCTATATACATTTAAAACTTCAGAGAAGAAAGATGGTATAGACCAGGGAAAAGAATGCAAAGGCCAAAGTGGTTAGTCTTGCCTCAATTGTAAAATTTTAACAACCTAGAAAAACAGGATGAGAACAATACATAAAGCATTAGGTTCCAAAGGGAATTGTTGAAGCCATTTTGTCAACAAGGCTGTATACTTGTTTTATATAGAAATCAAGCTTTCATCGAGAAAAATGAAAAAATACAAAGGACTTCCAATAAAGCAGTCGAAGGAAAGGAGCCCAACTGAAAAAGGGGCTCTAATCTAACAAAATGAGACTTAAAGGATGATCACAAAATTCTTATGCACCCATGCTCGACGAAAAACATGAAACCTCACAAGAGACAAAACTTCCTCCCACAATCTTTCAAATTCCCCTATTCTTCCCTTCAAGCTATAGGCCCCAAAGAATAGCATAAACACCTGCAATTCACAACAAAATATCCTTTCTCATGAAAGGAGGAGTGAAGAGCAACTCCTCAACCATAGAAAAACGTCTGGACTGAACCCAAAATACACCACACGTTTGGGAAAAGAATAATGGAAGACCAACTAGGCAAATTGGAAACTCCCAATAATGTGATCAATATCCTATACCCAACCCACCTAATTCAATCAGTTTTGAGATGCCTCCCACTAATCATATGAATAACCCTCCCTCATTCACACCCTCCCCTTCTATCGAAATTCCCCCATGATCTTCTCCAACCTATTATTGAAAGTGGAATGAATCTTAAAAAGAGAGCAAAACAGAAGTATTTTGAACTCTCACTCAATATAGACTCGATAGAAATTTCCTTCTAGGTCATGGATGAATGCCCTTTTTTTAAGAGATTTTGTTAACCCTTTCTACAATTTAGTTTCATGAAGACGAACAATTGGTGTTATGACTAAGGACTAAAGTAGTGGGAAGACCCTACTTGTCCATCTGGCCAACTAGGACTTGATGGTGGCTGTTTATTATTTCATTTTCTAGTAATTTAAAACCCATTACCGTTGAATTTTTTTTTTAAATCTTTTGGAAAGAAATAGAGATGGAGGCTTCCATCAAAGTTCAATTACTCTTCGCTTCAAAACTTGGGAATTCGGGAATTTGGTAAGCTTAGAAGAAAAGAAGTATGACTTGGTTGCTGTATCATGTAGTGTGTTTGAGAATTTCCCTTGGAACAAAATGGGAAATTCAATCTAGTACCTGTTGCTTGATCCCCTAGTCACTTATTGTCATGTGTAGGAACTCAACTGCTGCTTGAGATATTTTTCATTTTGCTCATACCCGCATTATGTTGGAACAATTGACCGAAGTCACCATGTAATCTTGTGACCTTTCCCAAATGTTATATTCAGGTTATTTAGAGAGGAAAGATGGGGCACATATTCTTTTAACTTCCCTTCCTCAAGTTATTTTGCTCCGTTTGTTCTAGATCAGTGTGCCTCTTATTGAACCCATTTGTTCTAAAATCAATTTTTTTCTTGTATTAAATTGGGCGGACGGTCTAATGTCGCTTGGGTCAATGCTATCAAAATTTTGTTTAAGAATTTGGTTTGAAAGGAATTTTAAAGAGAAGTGAGAGACGAAGGTTCTAGATCTTGCTTATTCATTCTTAGCATCTACTAGGAGCTTATTGTTTTTTAATTCTTTCAAAATGTTATTCTAAAGCCATATACTTTTTTGTATTATTCACGTTTTTATGACTATTGGGAGCTTTGTGATTGGTGTGGGTATGGGTGGTTTCCATATTTAACCTCCCATTCTGTGAGTTATCTTTATGAATTGATGCTAATTGTTATGAATCAACCACAAAATAGTTTAAATTTTGATTGAGTGGGGAAAACATTGTCTCTTTGCTTCACTCTCTCGCTCTCTATTCTTGCATGCTGACTTGGAGAACTTCAGAAGGATTCTTATATGTAGCACAGTCACGTCAGTTCTTGTCTTCAAGGGATATGAAATATCTTTGTTTAATCTTCTTCAGGCATAAATTGTATATATATAGTATGTATTGATGCTTTTTTTTTTTTCTTTCTAAAATTTTTAAGCAGCTTATACGATTCTTTTTCACCCTTATGCCTGGGAGTCTACATTTATTCTGTAATGTTAAAATATCAGAATCAAAATTCAGTATCTGATGAAGGTACCAAGTTTATTCCATTGTTTATGTCCTGTAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGTGAGTATCTTATGAGATCTTGTACATCTCGTTTTTGAGTATGGTGTCTCATTTCTTCTTACCGATATCATTTCCTTTTTTTTTTTATTCTCTTCCTATTAAAATTATTTATCTAGGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTAAATGGAAATGCTTTTGGAAATCGTTTTCTAGTGTTGCCTGGGGAGTAATCAGCAGTCC

mRNA sequence

GTAACTACTAACTTTTTAACAAATGCGCTGACTGGTACATCTTGTTCTTGAAAATTGACATTTTTGGAGCAGAAATATTGCGTGTAACCACACTATTGGGGAAGGCATCAGTTTTAGGTCAAAGTGGGCTTGAATATTCCAGCCCCCTGGCTTCTGGAGGAATATTTTCAAATGGAGGTGCTGACATGAATGGATGGCCATCACGGTTTCAATCAGAAGTACGGATACTAACCATTAACATAACCTTACTGCCCATCTAATTTACTGTACATAAGAAGCATTGCTGACACAAACTTCTACATTTTTTTGCTAACTCATGGAATTTACTAATTGCACTTGGGGATAGCTTCTCTAATTAAAAAAATGAGACTTCGCTTTATTTTTCACTGATGCATTTTTTTCCCAGTCTTCTAGTTTTTTCAGCTTCTCTAATGTTTCTAACAAATTGGTTCTCCACCTTCAGCCATCTTGATAAATGGATTACAACGCCGATCAAATTCTGAGGAGCTTACTTACTTTTCTAATTTGTCTTTATGTATGTGACAAGTTCTATGTGTGAATAATTGATCTTACTTTTCTAATTTGACTTAAATGTTTTGTTTTTTAGTGCCAAGGGTTTAATATTCTAATATAGAGTGCTGACTCGTTAGTTAACTTTTGTTTATCCCTTGTCTATCTTGGTGAAGGGACTTTTCAAGAAACTTTACCTGTTTGCACACTTGGAATTTTGAAATACATAAATTAGTGGCCCCAAGAGTAATTTATGTCAGATTTAGCGCATTCATATGGTTGTCCAAGAGTGTGTCTTCATTAAGTGAAAAAAAAAAAAAAAAAAGTAGAGGAAAAGAAAAGAAAAGAAATATGCTACTTCAAGATCCACGACAACATTTGAATGGTTCTGGGATTCCTAGTATTCCCTTAAGCAACCTAAACATTATCATACTTTCTATGCATGATTATAATGTTCTCTCTCAAGGTATGCAGTGTTTTCAGTACTCTGCAGTTTCTCCCTGGATTGTTGTACTAGAATCTATGACTTTGATATATATTGTTTCTGAAAATATCCCATGTTCTTTACACCAAAGTTATGTTGGCTGTTAAACATATCTTGTGTAGGATGATTGCCTTCATGTTAATTTTCTGGTATGAACTCTATATGATGTTGTGTATGTAGATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTAAATGGAAATGCTTTTGGAAATCGTTTTCTAGTGTTGCCTGGGGAGTAATCAGCAGTCC

Coding sequence (CDS)

ATGTCAGGTTTATTGCAACCCTCATCAGCACAAAATTGGCTAAGTTCCCAAGGTAGTTCGTCAAGTCTTATTGTGAAGAGAACCATCAGAGTAGACGTTCCTGTTGACAACTACCCTAATTATAACTTTGTCGGCCGCCTCCTTGGACCTAGGGGAAACTCTCTCAAGCGAGTGGAGGCAAGTACCGATTGTCGAGTTTTGATTAGAGGACGAGGTAGCATTAAGGATCCAGTTAAGGAAGAAATGCTGAGAGGAAAACCAGGTTACGAGCATTTGAATGAGCCTCTCCACATTCTAGTTGAGGCAGAATTGCCAGTTGAAATTATTGATGCTCGCCTTATGCAGGCCCACGAGATTCTCGAGGACTTGCTCAAACCAATAGATGAATCTCACGACTTCTACAAGAAGCAACAGCTACGAGAGCTAGCTTTGCTCAATGGCACACTTCGTGAGGAGGGTTCACCTATGTCTAGTTCTGTGTCTCCCTTCCACAATAGCCTCGGAATGAAGAGAGCGAAAACTAGGGGGTAA

Protein sequence

MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Homology
[Close]
BLAST of Carg23363 vs. NCBI nr
Match: XP_022940633.1 (KH domain-containing protein At5g56140-like isoform X1 [Cucurbita moschata] >XP_023524463.1 KH domain-containing protein At5g56140-like isoform X1 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 348.6 bits (893), Expect = 1.2e-92
Identity = 176/176 (100.00%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 180

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL
Sbjct: 181 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 240

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]
BLAST of Carg23363 vs. NCBI nr
Match: XP_022981699.1 (KH domain-containing protein At4g26480-like [Cucurbita maxima])

HSP 1 Score: 346.7 bits (888), Expect = 4.7e-92
Identity = 175/176 (99.43%), Postives = 176/176 (100.00%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVD+YPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 170 MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDSYPNYNFVGRLLGPRGNSLKRVEA 229

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL
Sbjct: 230 STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 289

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 290 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 345

[Close]
BLAST of Carg23363 vs. NCBI nr
Match: XP_022940634.1 (KH domain-containing protein At4g26480-like isoform X2 [Cucurbita moschata] >XP_023524464.1 KH domain-containing protein At4g26480-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 345.5 bits (885), Expect = 1.1e-91
Identity = 174/174 (100.00%), Postives = 174/174 (100.00%), Query Frame = 0 

Query: 3   GLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEAST 62
           GLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEAST
Sbjct: 72  GLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEAST 131

Query: 63  DCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILED 122
           DCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILED
Sbjct: 132 DCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILED 191

Query: 123 LLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           LLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 192 LLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 245

[Close]
BLAST of Carg23363 vs. NCBI nr
Match: XP_022139476.1 (KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia])

HSP 1 Score: 337.0 bits (863), Expect = 3.8e-89
Identity = 168/176 (95.45%), Postives = 173/176 (98.30%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQPSSAQNWLSSQGSSS LIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA
Sbjct: 129 MSGLLQPSSAQNWLSSQGSSSGLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 188

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARL+QA EIL
Sbjct: 189 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLLQAKEIL 248

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           +DLLKPIDESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 249 QDLLKPIDESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 304

[Close]
BLAST of Carg23363 vs. NCBI nr
Match: XP_008447797.1 (PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo])

HSP 1 Score: 332.4 bits (851), Expect = 9.3e-88
Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQ SSAQNWLSSQGSSS LIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]
BLAST of Carg23363 vs. TAIR10
Match: AT4G26480.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 298.5 bits (763), Expect = 2.7e-81
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 8   SSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 67
           S A NWL+S GSSS LIVKRTIRVD+PVD YPNYNFVGRLLGPRGNSLKRVEASTDCRVL
Sbjct: 141 SPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 200

Query: 68  IRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPI 127
           IRGRGSIKDP+KE+M+RGKPGYEHLNEPLHILVEAELP+EI+DARLMQA EIL+DLL P+
Sbjct: 201 IRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPV 260

Query: 128 DESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           +E+HDFYKKQQLRELALLNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Sbjct: 261 EETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308

[Close]
BLAST of Carg23363 vs. TAIR10
Match: AT5G56140.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 294.3 bits (752), Expect = 5.1e-80
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 8   SSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 67
           S   NWL+S GSSS LI KRTIRVD+PVDNYPN+NFVGRLLGPRGNSLKRVEASTDCRVL
Sbjct: 147 SPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 206

Query: 68  IRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPI 127
           IRGRGSIKDP+KEEM+RGKPGYEHLNEPLHILVEAELP+EI+DARLMQA EIL+DLL P+
Sbjct: 207 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 266

Query: 128 DESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR 176
           +E+HD YKKQQLRELALLNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Sbjct: 267 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313

[Close]
BLAST of Carg23363 vs. TAIR10
Match: AT3G08620.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 226.9 bits (577), Expect = 9.9e-60
Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0 

Query: 10  AQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIR 69
           A  W  +  S SS  VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IR
Sbjct: 118 AMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 177

Query: 70  GRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPIDE 129
           G+GSIKDP KEE L+GKPGYEHLNE LHIL+EA+LP++I+D +L QA EI+E+L+KP+DE
Sbjct: 178 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 237

Query: 130 SHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 175
           S D+ K+QQLRELALLN  LRE     S SVSPF NS  MKR KT
Sbjct: 238 SQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]
BLAST of Carg23363 vs. TAIR10
Match: AT2G38610.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 220.3 bits (560), Expect = 9.3e-58
Identity = 113/171 (66.08%), Postives = 134/171 (78.36%), Query Frame = 0 

Query: 7   PSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRV 66
           P    +W  + GS SS  VKR +R+++PVDNYPN+NFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 116 PGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRV 175

Query: 67  LIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKP 126
            IRG+GSIKDP KE+ LRG+PGYEHLNE LHIL+EA+LP  I++ RL QA EI+E+LLKP
Sbjct: 176 FIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP 235

Query: 127 IDESHDFYKKQQLRELALLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 175
           +DES DF K+QQLRELALLN   LREE  G     SVSPF++S   KR KT
Sbjct: 236 VDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

[Close]
BLAST of Carg23363 vs. TAIR10
Match: AT1G09660.1 (RNA-binding KH domain-containing protein)

HSP 1 Score: 202.2 bits (513), Expect = 2.6e-52
Identity = 98/144 (68.06%), Postives = 116/144 (80.56%), Query Frame = 0 

Query: 9   SAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLI 68
           S   W+   G  +  IVK+ IR+DVPVD YP+YNFVGR+LGPRGNSLKRVE +T CRV I
Sbjct: 129 SPVGWIGMPGLPNPPIVKKVIRLDVPVDKYPSYNFVGRILGPRGNSLKRVELATHCRVFI 188

Query: 69  RGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPID 128
           RGRGS+KD VKEE L+GKPGYEHL EPLH+L+EAELP +II++RL  A   LE LLKP+D
Sbjct: 189 RGRGSVKDTVKEEKLKGKPGYEHLCEPLHVLIEAELPEDIINSRLEHAVHFLESLLKPMD 248

Query: 129 ESHDFYKKQQLRELALLNGTLREE 153
           ES D YK++QL+ELA LNGTLREE
Sbjct: 249 ESMDHYKREQLKELAALNGTLREE 272

[Close]
BLAST of Carg23363 vs. Swiss-Prot
Match: sp|Q0WLR1|QKIL1_ARATH (KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26480 PE=2 SV=1)

HSP 1 Score: 298.5 bits (763), Expect = 4.8e-80
Identity = 146/169 (86.39%), Postives = 160/169 (94.67%), Query Frame = 0 

Query: 8   SSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 67
           S A NWL+S GSSS LIVKRTIRVD+PVD YPNYNFVGRLLGPRGNSLKRVEASTDCRVL
Sbjct: 141 SPAPNWLNSPGSSSGLIVKRTIRVDIPVDKYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 200

Query: 68  IRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPI 127
           IRGRGSIKDP+KE+M+RGKPGYEHLNEPLHILVEAELP+EI+DARLMQA EIL+DLL P+
Sbjct: 201 IRGRGSIKDPIKEDMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPV 260

Query: 128 DESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           +E+HDFYKKQQLRELALLNG+LREEGSPMS S+SP+ NSLGMKRAKTRG
Sbjct: 261 EETHDFYKKQQLRELALLNGSLREEGSPMSGSISPY-NSLGMKRAKTRG 308

[Close]
BLAST of Carg23363 vs. Swiss-Prot
Match: sp|Q9FKT4|QKIL2_ARATH (KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56140 PE=2 SV=1)

HSP 1 Score: 294.3 bits (752), Expect = 9.1e-79
Identity = 145/168 (86.31%), Postives = 157/168 (93.45%), Query Frame = 0 

Query: 8   SSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVL 67
           S   NWL+S GSSS LI KRTIRVD+PVDNYPN+NFVGRLLGPRGNSLKRVEASTDCRVL
Sbjct: 147 SPGPNWLNSPGSSSGLIAKRTIRVDIPVDNYPNFNFVGRLLGPRGNSLKRVEASTDCRVL 206

Query: 68  IRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPI 127
           IRGRGSIKDP+KEEM+RGKPGYEHLNEPLHILVEAELP+EI+DARLMQA EIL+DLL P+
Sbjct: 207 IRGRGSIKDPIKEEMMRGKPGYEHLNEPLHILVEAELPIEIVDARLMQAREILDDLLTPM 266

Query: 128 DESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTR 176
           +E+HD YKKQQLRELALLNGTLREEGSPMS SVSP+ NSLGMKRAKTR
Sbjct: 267 EETHDMYKKQQLRELALLNGTLREEGSPMSGSVSPY-NSLGMKRAKTR 313

[Close]
BLAST of Carg23363 vs. Swiss-Prot
Match: sp|Q75GR5|SPIN1_ORYSJ (KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=SPIN1 PE=1 SV=1)

HSP 1 Score: 235.7 bits (600), Expect = 3.9e-61
Identity = 116/166 (69.88%), Postives = 139/166 (83.73%), Query Frame = 0 

Query: 9   SAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLI 68
           ++ +W  +  S SS +VK+ +R+DVPVD+YPN+NFVGR+LGPRGNSLKRVEAST CRV I
Sbjct: 116 TSMDWQGAPPSPSSHVVKKILRLDVPVDSYPNFNFVGRILGPRGNSLKRVEASTGCRVFI 175

Query: 69  RGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPID 128
           RG+GSIKDP KE+ LRGKPGYEHL++PLHIL+EAE P  IIDARL  A E++E+LLKP+D
Sbjct: 176 RGKGSIKDPGKEDKLRGKPGYEHLSDPLHILIEAEFPASIIDARLRHAQEVIEELLKPVD 235

Query: 129 ESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 175
           ES DFYK+QQLRELA+LN TLRE+ SP   SVSPF N  GMKRAKT
Sbjct: 236 ESQDFYKRQQLRELAMLNSTLRED-SPHPGSVSPFSNG-GMKRAKT 279

[Close]
BLAST of Carg23363 vs. Swiss-Prot
Match: sp|Q8GYR4|QKIL4_ARATH (KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08620 PE=2 SV=1)

HSP 1 Score: 226.9 bits (577), Expect = 1.8e-58
Identity = 112/165 (67.88%), Postives = 132/165 (80.00%), Query Frame = 0 

Query: 10  AQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRVLIR 69
           A  W  +  S SS  VKR +R+D+PVD YPN+NFVGRLLGPRGNSLKRVEA+T CRV IR
Sbjct: 118 AMEWQGAPASPSSYPVKRILRLDLPVDTYPNFNFVGRLLGPRGNSLKRVEATTGCRVYIR 177

Query: 70  GRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKPIDE 129
           G+GSIKDP KEE L+GKPGYEHLNE LHIL+EA+LP++I+D +L QA EI+E+L+KP+DE
Sbjct: 178 GKGSIKDPEKEEKLKGKPGYEHLNEQLHILIEADLPIDIVDIKLRQAQEIIEELVKPVDE 237

Query: 130 SHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKT 175
           S D+ K+QQLRELALLN  LRE     S SVSPF NS  MKR KT
Sbjct: 238 SQDYIKRQQLRELALLNSNLRENSPGPSGSVSPF-NSNAMKRPKT 281

[Close]
BLAST of Carg23363 vs. Swiss-Prot
Match: sp|Q9ZVI3|QKIL3_ARATH (KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38610 PE=1 SV=1)

HSP 1 Score: 220.3 bits (560), Expect = 1.7e-56
Identity = 113/171 (66.08%), Postives = 134/171 (78.36%), Query Frame = 0 

Query: 7   PSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEASTDCRV 66
           P    +W  + GS SS  VKR +R+++PVDNYPN+NFVGRLLGPRGNSLKRVEA+T CRV
Sbjct: 116 PGMTMDWQGAPGSPSSYTVKRILRLEIPVDNYPNFNFVGRLLGPRGNSLKRVEATTGCRV 175

Query: 67  LIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEILEDLLKP 126
            IRG+GSIKDP KE+ LRG+PGYEHLNE LHIL+EA+LP  I++ RL QA EI+E+LLKP
Sbjct: 176 FIRGKGSIKDPEKEDKLRGRPGYEHLNEQLHILIEADLPASIVEIRLRQAQEIIEELLKP 235

Query: 127 IDESHDFYKKQQLRELALLN-GTLREE--GSPMSSSVSPFHNSLGMKRAKT 175
           +DES DF K+QQLRELALLN   LREE  G     SVSPF++S   KR KT
Sbjct: 236 VDESQDFIKRQQLRELALLNSNNLREESPGPSGGGSVSPFNSS--GKRPKT 284

[Close]
BLAST of Carg23363 vs. TrEMBL
Match: tr|A0A1S4DWW8|A0A1S4DWW8_CUCME (KH domain-containing protein At5g56140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC103490185 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.1e-88
Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQ SSAQNWLSSQGSSS LIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 115 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 174

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 175 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 234

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 235 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 290

[Close]
BLAST of Carg23363 vs. TrEMBL
Match: tr|A0A1S3BI94|A0A1S3BI94_CUCME (KH domain-containing protein At5g56140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC103490185 PE=4 SV=1)

HSP 1 Score: 332.4 bits (851), Expect = 6.1e-88
Identity = 166/176 (94.32%), Postives = 172/176 (97.73%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQ SSAQNWLSSQGSSS LIVKRTIRVDVPVDN+PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLSSQGSSSGLIVKRTIRVDVPVDNFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]
BLAST of Carg23363 vs. TrEMBL
Match: tr|A0A067KJN6|A0A067KJN6_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09537 PE=4 SV=1)

HSP 1 Score: 328.9 bits (842), Expect = 6.8e-87
Identity = 162/176 (92.05%), Postives = 170/176 (96.59%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MS LLQPSSAQNWLSSQGSSS LIVKRTIRVD+PVD YP+YNFVGRLLGPRGNSLKRVEA
Sbjct: 120 MSSLLQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDTYPSYNFVGRLLGPRGNSLKRVEA 179

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           ST+CRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEI+DARLMQA EIL
Sbjct: 180 STECRVLIRGRGSIKDPTREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREIL 239

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP+DESHDFYKKQQLRELA+LNGTLREEGSPMS SVSPFHNSLGMKRAKTRG
Sbjct: 240 EDLLKPVDESHDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 295

[Close]
BLAST of Carg23363 vs. TrEMBL
Match: tr|A0A0A0K3M6|A0A0A0K3M6_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=1)

HSP 1 Score: 327.4 bits (838), Expect = 2.0e-86
Identity = 163/176 (92.61%), Postives = 171/176 (97.16%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           MSGLLQ SSAQNWL+SQGSSS LIVKRTIRVDVPV+ +PNYNFVGRLLGPRGNSLKRVEA
Sbjct: 121 MSGLLQASSAQNWLTSQGSSSGLIVKRTIRVDVPVETFPNYNFVGRLLGPRGNSLKRVEA 180

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           STDCRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEIIDARLMQA EIL
Sbjct: 181 STDCRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAREIL 240

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP++ESHDFYKKQQLRELA+LNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG
Sbjct: 241 EDLLKPMEESHDFYKKQQLRELAMLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 296

[Close]
BLAST of Carg23363 vs. TrEMBL
Match: tr|A0A1R3KIU7|A0A1R3KIU7_9ROSI (Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_07780 PE=4 SV=1)

HSP 1 Score: 326.6 bits (836), Expect = 3.4e-86
Identity = 160/176 (90.91%), Postives = 171/176 (97.16%), Query Frame = 0 

Query: 1   MSGLLQPSSAQNWLSSQGSSSSLIVKRTIRVDVPVDNYPNYNFVGRLLGPRGNSLKRVEA 60
           +SGL+QPSSAQNWLSSQGSSS LIVKRTIRVD+PVDNYP+YNFVGRLLGPRGNSLKRVEA
Sbjct: 177 ISGLVQPSSAQNWLSSQGSSSGLIVKRTIRVDIPVDNYPSYNFVGRLLGPRGNSLKRVEA 236

Query: 61  STDCRVLIRGRGSIKDPVKEEMLRGKPGYEHLNEPLHILVEAELPVEIIDARLMQAHEIL 120
           +T+CRVLIRGRGSIKDP +EEM+RGKPGYEHLNEPLHILVEAELPVEI+DARLMQA EIL
Sbjct: 237 NTECRVLIRGRGSIKDPAREEMMRGKPGYEHLNEPLHILVEAELPVEIVDARLMQAREIL 296

Query: 121 EDLLKPIDESHDFYKKQQLRELALLNGTLREEGSPMSSSVSPFHNSLGMKRAKTRG 177
           EDLLKP+DES DFYKKQQLRELA+LNGTLREEGSPMS SVSPFHNSLGMKRAKTRG
Sbjct: 297 EDLLKPVDESQDFYKKQQLRELAMLNGTLREEGSPMSGSVSPFHNSLGMKRAKTRG 352

The following BLAST results are available for this feature:
BLAST of Carg23363 vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022940633.11.2e-92100.00KH domain-containing protein At5g56140-like isoform X1 [Cucurbita moschata] >XP_... [more]
XP_022981699.14.7e-9299.43KH domain-containing protein At4g26480-like [Cucurbita maxima][more]
XP_022940634.11.1e-91100.00KH domain-containing protein At4g26480-like isoform X2 [Cucurbita moschata] >XP_... [more]
XP_022139476.13.8e-8995.45KH domain-containing protein At5g56140-like isoform X1 [Momordica charantia][more]
XP_008447797.19.3e-8894.32PREDICTED: KH domain-containing protein At5g56140 isoform X2 [Cucumis melo][more]
BLAST of Carg23363 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G26480.12.7e-8186.39RNA-binding KH domain-containing protein[more]
AT5G56140.15.1e-8086.31RNA-binding KH domain-containing protein[more]
AT3G08620.19.9e-6067.88RNA-binding KH domain-containing protein[more]
AT2G38610.19.3e-5866.08RNA-binding KH domain-containing protein[more]
AT1G09660.12.6e-5268.06RNA-binding KH domain-containing protein[more]
BLAST of Carg23363 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q0WLR1|QKIL1_ARATH4.8e-8086.39KH domain-containing protein At4g26480 OS=Arabidopsis thaliana OX=3702 GN=At4g26... [more]
sp|Q9FKT4|QKIL2_ARATH9.1e-7986.31KH domain-containing protein At5g56140 OS=Arabidopsis thaliana OX=3702 GN=At5g56... [more]
sp|Q75GR5|SPIN1_ORYSJ3.9e-6169.88KH domain-containing protein SPIN1 OS=Oryza sativa subsp. japonica OX=39947 GN=S... [more]
sp|Q8GYR4|QKIL4_ARATH1.8e-5867.88KH domain-containing protein At3g08620 OS=Arabidopsis thaliana OX=3702 GN=At3g08... [more]
sp|Q9ZVI3|QKIL3_ARATH1.7e-5666.08KH domain-containing protein At2g38610 OS=Arabidopsis thaliana OX=3702 GN=At2g38... [more]
BLAST of Carg23363 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S4DWW8|A0A1S4DWW8_CUCME6.1e-8894.32KH domain-containing protein At5g56140 isoform X1 OS=Cucumis melo OX=3656 GN=LOC... [more]
tr|A0A1S3BI94|A0A1S3BI94_CUCME6.1e-8894.32KH domain-containing protein At5g56140 isoform X2 OS=Cucumis melo OX=3656 GN=LOC... [more]
tr|A0A067KJN6|A0A067KJN6_JATCU6.8e-8792.05Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_09537 PE=4 SV=1[more]
tr|A0A0A0K3M6|A0A0A0K3M6_CUCSA2.0e-8692.61Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G188690 PE=4 SV=1[more]
tr|A0A1R3KIU7|A0A1R3KIU7_9ROSI3.4e-8690.91Uncharacterized protein OS=Corchorus olitorius OX=93759 GN=COLO4_07780 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: Molecular Function
TermDefinition
GO:0003723RNA binding
GO:0003676nucleic acid binding
Vocabulary: INTERPRO
TermDefinition
IPR036612KH_dom_type_1_sf
IPR004087KH_dom
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003723 RNA binding
molecular_function GO:0003676 nucleic acid binding
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
Carg23363-RACarg23363-RAmRNA


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR004087K Homology domainSMARTSM00322kh_6coord: 25..118
e-value: 1.2E-5
score: 34.8
IPR036612K Homology domain, type 1 superfamilyGENE3DG3DSA:3.30.1370.10coord: 5..156
e-value: 1.9E-58
score: 199.9
IPR036612K Homology domain, type 1 superfamilySUPERFAMILYSSF54791Eukaryotic type KH-domain (KH-domain type I)coord: 30..150
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..165
NoneNo IPR availableMOBIDB_LITEmobidb-litedisorder_predictioncoord: 151..176
NoneNo IPR availablePANTHERPTHR11208RNA-BINDING PROTEIN RELATEDcoord: 12..174
NoneNo IPR availablePANTHERPTHR11208:SF48SUBFAMILY NOT NAMEDcoord: 12..174
NoneNo IPR availableCDDcd02395SF1_like-KHcoord: 28..150
e-value: 1.52611E-55
score: 172.814