Carg26853-RA (mRNA) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexonthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGATCTCCGGTTACCTTTTCTCCTCTTCCTTTTCTTGCAGGCTGTTTCCGGCCTCCTCCTCGCCGCTGCGTCCAACGTTGCCTACCCCTCCGTCGTCGATACTGGAGTCGGTGATTGCTCAGTTTCCGACGGCGGCGATGGCAGCCTCACTCCTATCCGTCGAGAAGTTTACGATAATGGACGAATCATTGACATCAGTCATCGGTTTACTGTGGATATGCCGTCTTGGGAATCTGACGAAGGGCTTGGCCAGTTTCTGTGGCTTCCGAAGAGCATGAAGAATGGTTCGCTTGCTAATAACTCTGAAATGAAGCTTCCGGCTCACACTGGTACGCACGTCGATGCGCCTGGTCATGTTTTTGATCATTACTTTGATGCGGGATTCGATGTTGACACACTCGACTTGGGAGTCCTCAATGGTATTGATTCTCTACTAATCTTTGGTTTTCTTCGGTGTGGTTTTGTTGAACTTTTTGAATTTGTGGCTTTGATTCCATGGATCTATTTTAAACTGAAGCCTGTTATTTAAGTTCATACTCTTGGGGTTTGCTGATTGTCTCATGTGCTTGTTTCTTCAGGTCCTGGACTGTTGGTTGACGTTCCAAGGGATAAGAACATTACTGGTACGCATTGCAAGCGTTCTTCATTGCTTTTCTTGCTTGTTTTTTTGTATGTTTCTCACTAATTTAGCTTTACACGGCATCTTCAATGTTTGCAGATATGTATCTTCCCTAACTCTAACCCATCTGGTAGACCATGTGGATATATTTTGCAATTTTTTTCTAAATTACGTTCTATCTACCAAGTAATACATAATCCAAAAACAAGAAATGGATGAGTCTTGATATTTATTTTGTAAGAAACGAACAATTCTTAAATGGGCGTTTAAACAATTTTTGGTTTTTTGTTGTTGCAGCTGAAGTCATGAAGTCTTTGAACATTCCCAAAGGAGTACGCCGTGTACTCTTCAGAACATTAAATACTGACAGGTAAAAAATTTGTGAACAGAACTTTCAGTTCGTCACCTGAAAACAAAAATAATAAAAAATGGAAGCCTTAAGCTGTTGATGAATTATGATATATCTTGTTTGGTAAAGTAATTGATACTTTTATTTGAAGGTATTTGTTCTTCGAGGTTTTCATTTCATGGGCTTGTTATGTGGACGTGGTTCTTTTGTTCGTATTTCGAGCATCCAAATATGTATTTCTGAACTTCCAATGTTATTGTCTAGTTATCTAATCTTCTGCTTTGTTAGTCCTGATATTTGTTTTTATTTGTTTCATTATGAATCAATTTTGAACCCATAAAACCATGTTCATGTCATGTCTTTCTGATTTCTAATGTCTGAAAAGTATGACAGATCTATTAAGGCAACAGATTCTTAATCCTTACTTTCACGGGTTTGCCTATTTACCAGTTTTTCTCATATAGACTGTTGCAGTATCTTGTCACTACATGCAATTTCGTTTAGTTCAAACTGGAAGGGTGAGGGGAGGGGTGGGATCTACCAATATGTATCATAAACTGTACAGTCCAGATCATGTAATGAAGAAAATCTTCCATTCTTCAACAAAACAACAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAAACTTCACTTTGATCCATGCCAATGCAGAGGTCTCATGTGGAAAAAGGAGTTTGACACGAGCTATGTTGGATTTATGAAGGATGGAGCAAAATGGCTTGTAGACAACACTGATATCAAACTAGTTGGTGAGAGAACGGTTACTCCTGTTCATTTTGAAGTCAAATTCATATTTTTCTGAAAGCTCAATGATTCAACTAACGGCTCCTTCTATCATGCAGGAATTGACTACTTATCAGTTGCTGCCTTTGATGATCTTATTCCGTCTCATCTCGAATTTTTAGAAGGCAGGGTAAGGATTCTTTTGTTCTTTTTTTTTTTTTTTTTTTTTCTGTACTAGAGACTATATGTAGTTGTTCTTGTTCGGGGATCTTTCTTTTCCAAACCAATTTCAAAGAGTCTTCGATTTCTTCTTTCTGACTGCTTGATTCAGAATTGGAATGCAAATTTTTTTAGATAGTTTTTCTATGTAAAAATTGAAGTATACTTACTCTGTAATGAATGTGTACATATAAATTAATTACCTAGAGTTTTAATCAAAGTTATGCTCTAGTGATTGCTAATGACAATTGCTTTTTCATCTTATGAGTCATCTTTTATCTAATACTTGCTATAATTGTGAAATTGCATTGGTTTATGAACTAGAGATCGAAAAAAATCCTATTGTCTAGTCAACTATAGTATGTATCTCTTTCCCCTGTCTCTTTCCCTTTGAAGTTAAAGTCAAAGATAGACAAGATGAAGGGTCACTCCCACCCCGCCCCTATCACAACTCGTTTGGGAAGCTTCTATTGATGTTCTTCTGAGGCATCTTTTATAACAGCCCAAGCTTACCGCTAACAAATATTGTCCTCTTTGGGCTAGCAGATACTATTTGTAACAGTCCAAGCCCACCGCTTGTAGATATTTTCCACTTTGGGTTTTCCTTTTCGGGCTTTCCCACAAGGTTTTTAAAACGCCCCTATTGGGAACAGGTTTCTATAACCTCTACAACCGATGTGGGATCTCACAATTCACCTTCTTGGGGGCCTAGCGTCCTCGCACACTACTTGGTGCTGCTTTGCCAGGGAGAGGTTTTTACACCCTTTCCAACTAATGTGGGATCTCACAATCCACCCCCTTTGTGGCCCAGTGTCCTGAGCAGGACACTTGTTCCTCTCTCCAATCGACGTAGGATCTCACATCTTTTATTTTAGCCATCAGCATTTGCCTTTCTATATCTTTGTCATCAGGTGTACAGCATATTATTATTGACAACTGCTCATAAAGATCATGGCTTTCCTGCACCATCTATGGCTTCCTTTAGAGATACCGAGTAGTGAACAAGACAAGATTAACACAAACACTAACACCATCTTTTGCTTCAGGAAACCATTCTTGTCGAAGGCTTAAAGCTTGATGGCGTCCAGCCGGGATTATATTCGATTCATTGCTTACCTCTTAGGTTGCTCGGCGCCGAGGGGTCGCCAATCAGATGCATTCTAATCAAGTAGTAAGTGAGTTCCATTCTGTTGGAGTTCTGGTTAAGGGGGGGAGTAGGATTACAATATTGTGCTATTTGATAGGCTTTCTAAGTTGATAGATTTACATTCAAATAAAGTGGAAATATCATCATGCTCAGATAATCAAGTTAAATGCGAAGACTGTTATGTTATGTTGGTAGTTCCAGAGATGAAGATGACATTATTTCTGAACCATTGTTAAAGGTATTGATAAAATGATGCAAGCTTGTGCCATAGTTGGATATTAATAACCCTTTTACCCTAAATATTGTATAGATTTAGG ATGGATCTCCGGTTACCTTTTCTCCTCTTCCTTTTCTTGCAGGCTGTTTCCGGCCTCCTCCTCGCCGCTGCGTCCAACGTTGCCTACCCCTCCGTCGTCGATACTGGAGTCGGTGATTGCTCAGTTTCCGACGGCGGCGATGGCAGCCTCACTCCTATCCGTCGAGAAGTTTACGATAATGGACGAATCATTGACATCAGTCATCGGTTTACTGTGGATATGCCGTCTTGGGAATCTGACGAAGGGCTTGGCCAGTTTCTGTGGCTTCCGAAGAGCATGAAGAATGGTTCGCTTGCTAATAACTCTGAAATGAAGCTTCCGGCTCACACTGGTACGCACGTCGATGCGCCTGGTCATGTTTTTGATCATTACTTTGATGCGGGATTCGATGTTGACACACTCGACTTGGGAGTCCTCAATGGTCCTGGACTGTTGGTTGACGTTCCAAGGGATAAGAACATTACTGCTGAAGTCATGAAGTCTTTGAACATTCCCAAAGGAGTACGCCGTGTACTCTTCAGAACATTAAATACTGACAGAGGTCTCATGTGGAAAAAGGAGTTTGACACGAGCTATGTTGGATTTATGAAGGATGGAGCAAAATGGCTTGTAGACAACACTGATATCAAACTAGTTGGAATTGACTACTTATCAGTTGCTGCCTTTGATGATCTTATTCCGTCTCATCTCGAATTTTTAGAAGGCAGGGAAACCATTCTTGTCGAAGGCTTAAAGCTTGATGGCGTCCAGCCGGGATTATATTCGATTCATTGCTTACCTCTTAGGTTGCTCGGCGCCGAGGGGTCGCCAATCAGATGCATTCTAATCAAGTAGTAAGTGAGTTCCATTCTGTTGGAGTTCTGGTTAAGGGGGGGAGTAGGATTACAATATTGTGCTATTTGATAGGCTTTCTAAGTTGATAGATTTACATTCAAATAAAGTGGAAATATCATCATGCTCAGATAATCAAGTTAAATGCGAAGACTGTTATGTTATGTTGGTAGTTCCAGAGATGAAGATGACATTATTTCTGAACCATTGTTAAAGGTATTGATAAAATGATGCAAGCTTGTGCCATAGTTGGATATTAATAACCCTTTTACCCTAAATATTGTATAGATTTAGG ATGGATCTCCGGTTACCTTTTCTCCTCTTCCTTTTCTTGCAGGCTGTTTCCGGCCTCCTCCTCGCCGCTGCGTCCAACGTTGCCTACCCCTCCGTCGTCGATACTGGAGTCGGTGATTGCTCAGTTTCCGACGGCGGCGATGGCAGCCTCACTCCTATCCGTCGAGAAGTTTACGATAATGGACGAATCATTGACATCAGTCATCGGTTTACTGTGGATATGCCGTCTTGGGAATCTGACGAAGGGCTTGGCCAGTTTCTGTGGCTTCCGAAGAGCATGAAGAATGGTTCGCTTGCTAATAACTCTGAAATGAAGCTTCCGGCTCACACTGGTACGCACGTCGATGCGCCTGGTCATGTTTTTGATCATTACTTTGATGCGGGATTCGATGTTGACACACTCGACTTGGGAGTCCTCAATGGTCCTGGACTGTTGGTTGACGTTCCAAGGGATAAGAACATTACTGCTGAAGTCATGAAGTCTTTGAACATTCCCAAAGGAGTACGCCGTGTACTCTTCAGAACATTAAATACTGACAGAGGTCTCATGTGGAAAAAGGAGTTTGACACGAGCTATGTTGGATTTATGAAGGATGGAGCAAAATGGCTTGTAGACAACACTGATATCAAACTAGTTGGAATTGACTACTTATCAGTTGCTGCCTTTGATGATCTTATTCCGTCTCATCTCGAATTTTTAGAAGGCAGGGAAACCATTCTTGTCGAAGGCTTAAAGCTTGATGGCGTCCAGCCGGGATTATATTCGATTCATTGCTTACCTCTTAGGTTGCTCGGCGCCGAGGGGTCGCCAATCAGATGCATTCTAATCAAGTAG MDLRLPFLLFLFLQAVSGLLLAAASNVAYPSVVDTGVGDCSVSDGGDGSLTPIRREVYDNGRIIDISHRFTVDMPSWESDEGLGQFLWLPKSMKNGSLANNSEMKLPAHTGTHVDAPGHVFDHYFDAGFDVDTLDLGVLNGPGLLVDVPRDKNITAEVMKSLNIPKGVRRVLFRTLNTDRGLMWKKEFDTSYVGFMKDGAKWLVDNTDIKLVGIDYLSVAAFDDLIPSHLEFLEGRETILVEGLKLDGVQPGLYSIHCLPLRLLGAEGSPIRCILIK
BLAST of Carg26853-RA vs. NCBI nr
Match: XP_022927895.1 (uncharacterized protein LOC111434658 [Cucurbita moschata]) HSP 1 Score: 563.1 bits (1450), Expect = 5.1e-157 Identity = 277/277 (100.00%), Postives = 277/277 (100.00%), Query Frame = 0
BLAST of Carg26853-RA vs. NCBI nr
Match: XP_022988883.1 (uncharacterized protein LOC111486103 [Cucurbita maxima]) HSP 1 Score: 557.0 bits (1434), Expect = 3.6e-155 Identity = 274/277 (98.92%), Postives = 274/277 (98.92%), Query Frame = 0
BLAST of Carg26853-RA vs. NCBI nr
Match: XP_011658891.1 (PREDICTED: uncharacterized protein LOC101221830 [Cucumis sativus] >KGN43899.1 hypothetical protein Csa_7G072860 [Cucumis sativus]) HSP 1 Score: 501.9 bits (1291), Expect = 1.4e-138 Identity = 252/277 (90.97%), Postives = 257/277 (92.78%), Query Frame = 0
BLAST of Carg26853-RA vs. NCBI nr
Match: XP_022148849.1 (uncharacterized protein LOC111017408 [Momordica charantia]) HSP 1 Score: 498.4 bits (1282), Expect = 1.5e-137 Identity = 248/279 (88.89%), Postives = 258/279 (92.47%), Query Frame = 0
BLAST of Carg26853-RA vs. NCBI nr
Match: XP_008454981.1 (PREDICTED: kynurenine formamidase [Cucumis melo]) HSP 1 Score: 495.4 bits (1274), Expect = 1.3e-136 Identity = 249/277 (89.89%), Postives = 256/277 (92.42%), Query Frame = 0
BLAST of Carg26853-RA vs. TAIR10
Match: AT4G35220.1 (Cyclase family protein) HSP 1 Score: 411.4 bits (1056), Expect = 4.5e-115 Identity = 202/271 (74.54%), Postives = 230/271 (84.87%), Query Frame = 0
BLAST of Carg26853-RA vs. TAIR10
Match: AT4G34180.1 (Cyclase family protein) HSP 1 Score: 339.0 bits (868), Expect = 2.8e-93 Identity = 162/227 (71.37%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of Carg26853-RA vs. TAIR10
Match: AT1G44542.1 (Cyclase family protein) HSP 1 Score: 329.3 bits (843), Expect = 2.2e-90 Identity = 166/271 (61.25%), Postives = 208/271 (76.75%), Query Frame = 0
BLAST of Carg26853-RA vs. Swiss-Prot
Match: sp|Q94JT5|CYL2_ARATH (Cyclase-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=CYCLASE2 PE=2 SV=1) HSP 1 Score: 411.4 bits (1056), Expect = 8.1e-114 Identity = 202/271 (74.54%), Postives = 230/271 (84.87%), Query Frame = 0
BLAST of Carg26853-RA vs. Swiss-Prot
Match: sp|Q0J6H8|CYL3_ORYSJ (Cyclase-like protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=CYL3 PE=2 SV=1) HSP 1 Score: 385.2 bits (988), Expect = 6.2e-106 Identity = 180/226 (79.65%), Postives = 202/226 (89.38%), Query Frame = 0
BLAST of Carg26853-RA vs. Swiss-Prot
Match: sp|Q6YX89|CYL4_ORYSJ (Cyclase-like protein 4 OS=Oryza sativa subsp. japonica OX=39947 GN=CYL4 PE=2 SV=1) HSP 1 Score: 351.7 bits (901), Expect = 7.6e-96 Identity = 179/274 (65.33%), Postives = 209/274 (76.28%), Query Frame = 0
BLAST of Carg26853-RA vs. Swiss-Prot
Match: sp|Q93V74|CYL1_ARATH (Cyclase-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=CYCLASE1 PE=1 SV=1) HSP 1 Score: 339.0 bits (868), Expect = 5.1e-92 Identity = 162/227 (71.37%), Postives = 193/227 (85.02%), Query Frame = 0
BLAST of Carg26853-RA vs. Swiss-Prot
Match: sp|Q94LA9|CYL3_ARATH (Cyclase-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=CYCLASE3 PE=2 SV=1) HSP 1 Score: 329.3 bits (843), Expect = 4.0e-89 Identity = 166/271 (61.25%), Postives = 208/271 (76.75%), Query Frame = 0
BLAST of Carg26853-RA vs. TrEMBL
Match: tr|A0A0A0K4M7|A0A0A0K4M7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G072860 PE=4 SV=1) HSP 1 Score: 501.9 bits (1291), Expect = 9.2e-139 Identity = 252/277 (90.97%), Postives = 257/277 (92.78%), Query Frame = 0
BLAST of Carg26853-RA vs. TrEMBL
Match: tr|A0A1S3BZX4|A0A1S3BZX4_CUCME (kynurenine formamidase OS=Cucumis melo OX=3656 GN=LOC103495264 PE=4 SV=1) HSP 1 Score: 495.4 bits (1274), Expect = 8.6e-137 Identity = 249/277 (89.89%), Postives = 256/277 (92.42%), Query Frame = 0
BLAST of Carg26853-RA vs. TrEMBL
Match: tr|A0A2P5AW66|A0A2P5AW66_PARAD (Kynurenine formamidase OS=Parasponia andersonii OX=3476 GN=PanWU01x14_294130 PE=4 SV=1) HSP 1 Score: 438.3 bits (1126), Expect = 1.2e-119 Identity = 214/273 (78.39%), Postives = 238/273 (87.18%), Query Frame = 0
BLAST of Carg26853-RA vs. TrEMBL
Match: tr|A0A2I4F756|A0A2I4F756_9ROSI (uncharacterized protein LOC108996170 isoform X2 OS=Juglans regia OX=51240 GN=LOC108996170 PE=4 SV=1) HSP 1 Score: 438.0 bits (1125), Expect = 1.6e-119 Identity = 216/270 (80.00%), Postives = 233/270 (86.30%), Query Frame = 0
BLAST of Carg26853-RA vs. TrEMBL
Match: tr|A0A1U8B569|A0A1U8B569_NELNU (uncharacterized protein LOC104607111 isoform X1 OS=Nelumbo nucifera OX=4432 GN=LOC104607111 PE=4 SV=1) HSP 1 Score: 437.2 bits (1123), Expect = 2.8e-119 Identity = 212/272 (77.94%), Postives = 229/272 (84.19%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following three_prime_UTR feature(s) are a part of this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
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