Carg26850-RA (mRNA) Silver-seed gourd

NameCarg26850-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionElicitor-responsive protein 3
LocationCucurbita_argyrosperma_scaffold_344 : 114386 .. 117037 (+)
Sequence length972
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTGTTCATTGTTTCGTAGGTTTCAAGAATCTTGTGAATATTCTATTCTGTTCTGTGAATTTGATTCGTTTTTTTTGGTTTTGTTTCGTGGGTCGAAGAAACAGAACAATTTAGGGCGAAGTCGACTTTAGAAAACCCCGCTCCATTATCTTTTGTTGATTCTTCTATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGGTATGTCTGTTTAGTTCTGTTTTTGAAAATTGTGTATGATTATTGATCAATCTTTCCCTCCAAAATGAAATATGAAATTGATTTCGTTTGTTTATGTTATTTTGGGTCAGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGGTTATGTTTTGGATTTTCCTTGTTGGTTGTGTTTAATTTGGTTAGATCTAATGAGATGAACATGAACTGAATGTGAATTTGATTGGCATTGTATGTATAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAGTAAGATTTATGTTCTTTCTTCCTTTTTGTTTGAACTTGTGTTCATGTTTTTCATTTGGGTATTGAGTTTTGAATGTTCTGTTTTGTAGAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGGTATGATATGGCTTTGAATTTGTTTGATATAATTTTGCCTGAAGCTTTTACTTGCTAGCGAATTACTTTTCTTTCAGGGATTTTCCATGTTTTCAAGGTTAGGATGTTAAAATAGCTATTGAGTTTGGTTTAGCCATCACCCCTTCTTGTGACCTGCCTTCCTATCTTACAGAGAAATTTCTCCGATATTAGCTGACTCAATAAATGTGAGATCCCACGTTAGTTAGAGAGGGAAACGAGTTCCAGCGAGGACGCTGGGCCTTGAAGGGGGTGGGTTGGGAGATCCCACTTTGGTTGGAGAGGGGAACGAAACATTCTTTATAAGGGTGTGGAAACCTCTCCCTAGCAGATGCGTTTTAAAAACTTTGAGAGGAAGGTCGAAAGGGAAAGTTTAGAGAGGACAATATCTGCTAGTGGTGAGCTTGGATTGTTACAAATGATATCAGAGCCAGACATTGGGCGATGTGCTAGCGAGGAGGTTGTGCCCCGAAGGGGGGTGGACACAAGGAGGTGTGCCAACAAGGATGTTGGGCCCCAAAGGGGGTGGATTGAGGGGTCCTATATCGATTGGAGAAGGGAATGAGTACTAGCGAGAACGCTGACCTTGAAAGAGGTGGATTGTGAGATCCCACATCGGTTGGAGAGGGGAACCAAGGGTTTTTTATAAGGGTGTGGAGACCTCTCCCTAATAGACACGTTTTAAAAACCTTGAGGGGAAGTTCGAAAGAAAAAGCCCAAAGAGGACAATATCGGGGTTGTGTGCTGTTACAAATGGTATCAGAGCTAGACACCGGGTGATGTGTCAGTGAGGAGGCTGAGCCTTGAAGGGGGTGGACACGAGGCAGTGTGCCAATAGGACATTGGGCCCCAAAGGGGAGTGGATTGGGAATCCCCAACGGTTTTGATTTCTTTTCATTTTTGTTTGTTTTGAATGAAAATTGACTTTCTTTATCAACTTGAAGAGTTGGCCTACACAGCACAGTGCTGACTTCTTTTCGAGATTCACATTGCATTTCTTCTATGTGCTTTTCGAACGCAATTTGAACTAAAAGCGTTCGTCGTTATTTACGATTTGTCTGGATCATTTGTTCGTTTTCGTTATTATTCTTTTGATATCTCACCGAGCAGAACGAAAAACGTCATTTCCCATGAGTCCATAATAAAAAGCTTTAACATTCACTTTTACCTTATTGTAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATGTAAGTGATATTTGTATTATGCCTTTAGTTACTGGTAAAAAACAATCCATTCCTGATAGTATAAGATTCCGACCTATCTGTTTTGGTTGTAGAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGTACGTTTACGTTTTAAATGCTCTGTTAAATGGAATCATAATGCAACTAAAACTTGCTTCTGTGTGCGTGTGTGTGCGTCGTTGTCGTCTCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCTCAAGGTTGGGTCTCAATGATCTCTCCATAAGTTGTATAGAAACTTCTGCTAATATATTTATATATATTTG

mRNA sequence

TTGTTCATTGTTTCGTAGGTTTCAAGAATCTTGTGAATATTCTATTCTGTTCTGTGAATTTGATTCGTTTTTTTTGGTTTTGTTTCGTGGGTCGAAGAAACAGAACAATTTAGGGCGAAGTCGACTTTAGAAAACCCCGCTCCATTATCTTTTGTTGATTCTTCTATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGAAATCTCAAGGTTGGGTCTCAATGATCTCTCCATAAGTTGTATAGAAACTTCTGCTAATATATTTATATATATTTG

Coding sequence (CDS)

ATGTCGATATATTCTATTCAGGGTCAACCTCTGGAAGTCATCGTTATTGGATGCACAAAGTTGAAAGATACGGAATGGATTTCAAGGCAGGATCCATATGTGTGCCTTGAATATGGTAGCACCAATTTCCGCACGACCACTTGTAGAGATGGTGGCAGAAATCCTATATTCCAAGAGAAATTTGTGTTCTCTCTAATTGAAGGGATTAGAGAGATTAATGTTACTGTTTGGAATAGCAATACAGTTACTTATGATGACTTCATTGGCAATGGAAAAATTCAATTGGCTAAGGTTCTAGCAGAAGGTTATGATGATAGCACATGGTCACTTCAAACAAAAACTGGCAGACATGCTGGGGAAGTACGATTGATTCTTCATTTTGCAACAGCCGATAGACTACCAGCAAATTTTGCACCGTCGGCACCGCCCTTTCACGCGCCTCCGCCATCCCAACTTGCCATGTACGCCACGATGCCATCGGCACACCCTACAGCCTACCCTCATCCTCATACACCCTATGCATTTTCATCTCCCTTTCCTTCTTACCCACCCAACAATGGAGCGTATCAAACATCCATGTATGCCTCCCCGTTTCTATCGGGGTATCCTCCATCGTCATACCCGCCGCCTTCCTCGGCTTATCCTCACGCTCCATACCCACCACATCCACAAGCCTCACCATTCTATCCTCCAGGCCCTTATCCTGGAGTTTATCCCCCACCACAGTATTGA

Protein sequence

MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPPPSSAYPHAPYPPHPQASPFYPPGPYPGVYPPPQY
BLAST of Carg26850-RA vs. NCBI nr
Match: XP_022927815.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita moschata])

HSP 1 Score: 426.0 bits (1094), Expect = 8.5e-116
Identity = 236/243 (97.12%), Postives = 236/243 (97.12%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXPP 240
           SYPPNNGAYQTSMYASPFLSGYPPSSY XXXXXXXXXXXXXXXXXXXXXXXXXX    PP
Sbjct: 181 SYPPNNGAYQTSMYASPFLSGYPPSSYXXXXXXXXXXXXXXXXXXXXXXXXXXXPGVYPP 240

Query: 241 PQY 244
           PQY
Sbjct: 241 PQY 243

BLAST of Carg26850-RA vs. NCBI nr
Match: XP_023531347.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 417.9 bits (1073), Expect = 2.3e-113
Identity = 201/205 (98.05%), Postives = 201/205 (98.05%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINV VWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVAVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSMYASPFLSGYPPS 206
           SYPPNNGAYQTSMYASPF SGYPPS
Sbjct: 181 SYPPNNGAYQTSMYASPFPSGYPPS 205

BLAST of Carg26850-RA vs. NCBI nr
Match: XP_022988903.1 (elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988905.1 elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima])

HSP 1 Score: 391.3 bits (1004), Expect = 2.3e-105
Identity = 189/193 (97.93%), Postives = 189/193 (97.93%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSIYSIQGQ LEVIVIGCTKLKDTEWISRQD YVCLEYGSTNFRTTTC DGGRNPIFQEK
Sbjct: 1   MSIYSIQGQALEVIVIGCTKLKDTEWISRQDSYVCLEYGSTNFRTTTCTDGGRNPIFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHP TPYAFSSPFP
Sbjct: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPPTPYAFSSPFP 180

Query: 181 SYPPNNGAYQTSM 194
           SYPPNNGAYQTSM
Sbjct: 181 SYPPNNGAYQTSM 193

BLAST of Carg26850-RA vs. NCBI nr
Match: XP_011658892.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN43902.1 hypothetical protein Csa_7G073380 [Cucumis sativus])

HSP 1 Score: 294.7 bits (753), Expect = 3.0e-76
Identity = 185/248 (74.60%), Postives = 199/248 (80.24%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS ++IQGQPLEV VIGCTKLKDTEWISRQDPYV LEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAP-----PFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAF 180
           VRLILHFA A+R  ++FAPSAP                                    +F
Sbjct: 121 VRLILHFANANRPTSSFAPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSF 180

Query: 181 SSPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            SP+PSYPP++G YQTSMY+SP+ SGYPP+SY XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 QSPYPSYPPSSGTYQTSMYSSPYPSGYPPTSYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXPPPQY 244
           XXXPPPQY
Sbjct: 241 XXXPPPQY 248

BLAST of Carg26850-RA vs. NCBI nr
Match: XP_008454977.1 (PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454978.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_016901753.1 PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo])

HSP 1 Score: 282.3 bits (721), Expect = 1.5e-72
Identity = 145/211 (68.72%), Postives = 157/211 (74.41%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS YSIQGQPLEV VIGCTKLKDTEWISRQDPYVCLEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPAN----FAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFS 180
           VRLILHFA A+R  ++                                         +F 
Sbjct: 121 VRLILHFANANRPTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQ 180

Query: 181 SPFPSYPPNNGAYQTSMYASPFLSGYPPSSY 208
           SP+PSYPP++G YQTSMY+SP+  GYPP+SY
Sbjct: 181 SPYPSYPPSSGTYQTSMYSSPYPPGYPPTSY 211

BLAST of Carg26850-RA vs. TAIR10
Match: AT4G34150.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 199.9 bits (507), Expect = 1.8e-51
Identity = 91/137 (66.42%), Postives = 110/137 (80.29%), Query Frame = 0

Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           IQGQ LEV V+GC KLKDTEW SRQDPYV LEYG  + RT TC DGG+N +FQEKF+F+L
Sbjct: 7   IQGQILEVTVVGCQKLKDTEWFSRQDPYVVLEYGGRSHRTRTCTDGGKNAVFQEKFIFTL 66

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
           IEG+R++ V VWNSNT++ DDFIGN  IQL KVL++ YDD TW+LQ+KTGR AGEV+L+L
Sbjct: 67  IEGLRDLKVAVWNSNTLSTDDFIGNATIQLQKVLSQEYDDCTWTLQSKTGRFAGEVQLLL 126

Query: 126 HFATADRLPANFAPSAP 143
           H+A A +     APSAP
Sbjct: 127 HYAGAKKHNYGSAPSAP 143

BLAST of Carg26850-RA vs. TAIR10
Match: AT1G63220.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 68.2 bits (165), Expect = 8.1e-12
Identity = 33/121 (27.27%), Postives = 60/121 (49.59%), Query Frame = 0

Query: 11  LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIR 70
           LEV+++    L+D ++++  DPYV L   + + ++      G  P + E F+F++ EG  
Sbjct: 6   LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTT 65

Query: 71  EINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATA 130
           E+   +++ +  T DD +G   I L  V  EG    T     K   + GE+ + L F  +
Sbjct: 66  ELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 125

Query: 131 D 132
           +
Sbjct: 126 E 126

BLAST of Carg26850-RA vs. TAIR10
Match: AT3G55470.1 (Calcium-dependent lipid-binding (CaLB domain) family protein)

HSP 1 Score: 55.5 bits (132), Expect = 5.5e-08
Identity = 33/106 (31.13%), Postives = 55/106 (51.89%), Query Frame = 0

Query: 11  LEVIVIGCTKLKDTEWISRQDPYVCLEY-GSTNFRTTTCRDGGRNPIFQEKF----VFSL 70
           LEV +I    LK ++++ + DPYV ++Y G T   +    DGGRNP + +K      F  
Sbjct: 6   LEVSLISGKGLKRSDFLGKIDPYVEIQYKGQTRKSSVAKEDGGRNPTWNDKLKWRAEFPG 65

Query: 71  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQ 112
                ++ V V + +T + DDFIG   + + ++L  G +  T  L+
Sbjct: 66  SGADYKLIVKVMDHDTFSSDDFIGEATVHVKELLEMGVEKGTAELR 111

BLAST of Carg26850-RA vs. TAIR10
Match: AT3G07940.1 (Calcium-dependent ARF-type GTPase activating protein family)

HSP 1 Score: 48.5 bits (114), Expect = 6.7e-06
Identity = 23/83 (27.71%), Postives = 46/83 (55.42%), Query Frame = 0

Query: 27  ISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIREINVTVWNSNTVTYDD 86
           +   DPYV L  G  + +T   ++   NP++ E  + S+ E +  + V V++ +T + DD
Sbjct: 246 VMTSDPYVILALGQQSVKTRVIKN-NLNPVWNETLMLSIPEPMPPLKVLVYDKDTFSTDD 305

Query: 87  FIGNGKIQLAKVL--AEGYDDST 108
           F+G  +I +  ++  A+ Y+ S+
Sbjct: 306 FMGEAEIDIQPLVSAAKAYETSS 327

BLAST of Carg26850-RA vs. Swiss-Prot
Match: sp|Q25AG5|ERG3_ORYSI (Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=2 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.0e-12
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0

Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           +QG  LEV+++G   L++T+++   DPY  L+  S   +++     G +P + E F+FS+
Sbjct: 2   VQG-TLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 61

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
                E+ + + +S++ T DDF+G   I L  +  EG    T     K   + GE+++ L
Sbjct: 62  THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGL 121

Query: 126 HFATAD 132
            F   D
Sbjct: 122 TFTPED 126

BLAST of Carg26850-RA vs. Swiss-Prot
Match: sp|Q0JBH9|ERG3_ORYSJ (Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 PE=1 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 6.0e-12
Identity = 37/126 (29.37%), Postives = 66/126 (52.38%), Query Frame = 0

Query: 6   IQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL 65
           +QG  LEV+++G   L++T+++   DPY  L+  S   +++     G +P + E F+FS+
Sbjct: 2   VQG-TLEVLLVGAKGLENTDYLCNMDPYAVLKCRSQEQKSSVASGKGSDPEWNETFMFSV 61

Query: 66  IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLIL 125
                E+ + + +S++ T DDF+G   I L  +  EG    T     K   + GE+++ L
Sbjct: 62  THNATELIIKLMDSDSGTDDDFVGEATISLEAIYTEGSIPPTVYNVVKEEEYRGEIKVGL 121

Query: 126 HFATAD 132
            F   D
Sbjct: 122 TFTPED 126

BLAST of Carg26850-RA vs. Swiss-Prot
Match: sp|Q9C8S6|Y1322_ARATH (C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana OX=3702 GN=At1g63220 PE=1 SV=1)

HSP 1 Score: 68.2 bits (165), Expect = 1.5e-10
Identity = 33/121 (27.27%), Postives = 60/121 (49.59%), Query Frame = 0

Query: 11  LEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSLIEGIR 70
           LEV+++    L+D ++++  DPYV L   + + ++      G  P + E F+F++ EG  
Sbjct: 6   LEVVLVSAKGLEDADFLNNMDPYVQLTCRTQDQKSNVAEGMGTTPEWNETFIFTVSEGTT 65

Query: 71  EINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVRLILHFATA 130
           E+   +++ +  T DD +G   I L  V  EG    T     K   + GE+ + L F  +
Sbjct: 66  ELKAKIFDKDVGTEDDAVGEATIPLEPVFVEGSIPPTAYNVVKDEEYKGEIWVALSFKPS 125

Query: 131 D 132
           +
Sbjct: 126 E 126

BLAST of Carg26850-RA vs. Swiss-Prot
Match: sp|A2WWV5|ERG1_ORYSI (Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=2 SV=2)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-09
Identity = 35/134 (26.12%), Postives = 66/134 (49.25%), Query Frame = 0

Query: 11  LEVIVIGCTKLKDTEW---ISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL-- 70
           LEV ++    L   ++   I + DPYV ++Y S   +++  RD G+NP + E F F +  
Sbjct: 7   LEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINS 66

Query: 71  --IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGR------- 130
               G  ++ + + + +T + DDF+G   I +  +++ G +  TW +     R       
Sbjct: 67  TAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKT 126

BLAST of Carg26850-RA vs. Swiss-Prot
Match: sp|Q0JHU5|ERG1_ORYSJ (Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 PE=1 SV=1)

HSP 1 Score: 62.8 bits (151), Expect = 6.2e-09
Identity = 35/134 (26.12%), Postives = 66/134 (49.25%), Query Frame = 0

Query: 11  LEVIVIGCTKLKDTEW---ISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFVFSL-- 70
           LEV ++    L   ++   I + DPYV ++Y S   +++  RD G+NP + E F F +  
Sbjct: 7   LEVHLVDAKGLTGNDFLGEIGKIDPYVVVQYRSQERKSSVARDQGKNPSWNEVFKFQINS 66

Query: 71  --IEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGR------- 130
               G  ++ + + + +T + DDF+G   I +  +++ G +  TW +     R       
Sbjct: 67  TAATGQHKLFLRLMDHDTFSRDDFLGEATINVTDLISLGMEHGTWEMSESKHRVVLADKT 126

BLAST of Carg26850-RA vs. TrEMBL
Match: tr|A0A0A0K6H5|A0A0A0K6H5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=1)

HSP 1 Score: 294.7 bits (753), Expect = 2.0e-76
Identity = 185/248 (74.60%), Postives = 199/248 (80.24%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS ++IQGQPLEV VIGCTKLKDTEWISRQDPYV LEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTFAIQGQPLEVTVIGCTKLKDTEWISRQDPYVFLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAP-----PFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAF 180
           VRLILHFA A+R  ++FAPSAP                                    +F
Sbjct: 121 VRLILHFANANRPTSSFAPSAPXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSF 180

Query: 181 SSPFPSYPPNNGAYQTSMYASPFLSGYPPSSYPXXXXXXXXXXXXXXXXXXXXXXXXXXX 240
            SP+PSYPP++G YQTSMY+SP+ SGYPP+SY XXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 181 QSPYPSYPPSSGTYQTSMYSSPYPSGYPPTSYXXXXXXXXXXXXXXXXXXXXXXXXXXXX 240

Query: 241 XXXPPPQY 244
           XXXPPPQY
Sbjct: 241 XXXPPPQY 248

BLAST of Carg26850-RA vs. TrEMBL
Match: tr|A0A1S4E0J9|A0A1S4E0J9_CUCME (leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495260 PE=4 SV=1)

HSP 1 Score: 282.3 bits (721), Expect = 1.0e-72
Identity = 145/211 (68.72%), Postives = 157/211 (74.41%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MS YSIQGQPLEV VIGCTKLKDTEWISRQDPYVCLEYGST FRTTTC DGGRNP FQEK
Sbjct: 1   MSTYSIQGQPLEVTVIGCTKLKDTEWISRQDPYVCLEYGSTKFRTTTCTDGGRNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REI VTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDS+WSLQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREIIVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSSWSLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPAN----FAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFS 180
           VRLILHFA A+R  ++                                         +F 
Sbjct: 121 VRLILHFANANRPTSSXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXSFQ 180

Query: 181 SPFPSYPPNNGAYQTSMYASPFLSGYPPSSY 208
           SP+PSYPP++G YQTSMY+SP+  GYPP+SY
Sbjct: 181 SPYPSYPPSSGTYQTSMYSSPYPPGYPPTSY 211

BLAST of Carg26850-RA vs. TrEMBL
Match: tr|A0A200PV28|A0A200PV28_9MAGN (C2 calcium-dependent membrane targeting OS=Macleaya cordata OX=56857 GN=BVC80_8963g41 PE=4 SV=1)

HSP 1 Score: 255.0 bits (650), Expect = 1.7e-64
Identity = 120/183 (65.57%), Postives = 145/183 (79.23%), Query Frame = 0

Query: 3   IYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEKFV 62
           +  IQG  LEV V+GC +LKDTEWISRQDPYVCLEYG   FRT TC DGG+NP FQEKF+
Sbjct: 4   VTGIQGHLLEVTVVGCNRLKDTEWISRQDPYVCLEYGGNKFRTRTCTDGGKNPTFQEKFI 63

Query: 63  FSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGEVR 122
           F+LIEG+RE++V+VWNSNT+TYDDFIG+GK+QL KVL++G+DD+ W LQTKTGRHAGEVR
Sbjct: 64  FTLIEGLRELSVSVWNSNTLTYDDFIGSGKVQLHKVLSQGFDDTAWPLQTKTGRHAGEVR 123

Query: 123 LILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFPSY 182
           LILHF  A+R    FAPSAPP+ AP   Q A+Y  +P  H   YP P  PY+ +SP+ +Y
Sbjct: 124 LILHFPNANRPGTTFAPSAPPYMAPAAPQGAVYGAVP--HAATYP-PTMPYSTASPYSTY 183

Query: 183 PPN 186
           PPN
Sbjct: 184 PPN 183

BLAST of Carg26850-RA vs. TrEMBL
Match: tr|D7UC14|D7UC14_VITVI (Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0180g00030 PE=4 SV=1)

HSP 1 Score: 254.6 bits (649), Expect = 2.2e-64
Identity = 123/186 (66.13%), Postives = 140/186 (75.27%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSI  IQGQ LEV V+GC KLKDTEWISRQDPYVCLEYGST FRT TC DGG+NP FQEK
Sbjct: 1   MSISGIQGQLLEVTVVGCNKLKDTEWISRQDPYVCLEYGSTKFRTRTCTDGGKNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVF+LIEG+RE+N  VWNSNT+TYDDFIG+GKIQL KVL++GYDD+ W LQTKTGRHAGE
Sbjct: 61  FVFTLIEGLREVNAVVWNSNTLTYDDFIGSGKIQLQKVLSQGYDDTAWPLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAPPPSQLAMYATMPSAHPTAYPHPHTPYAFSSPFP 180
           VRLILH+A A +   +FAPSAPP+ APP                      T Y  + P+P
Sbjct: 121 VRLILHYANARKPETSFAPSAPPYVAPPAXXXXXXXXXXXXXXXXXXXXATAYPATFPYP 180

Query: 181 SYPPNN 187
           SYPPN+
Sbjct: 181 SYPPNS 186

BLAST of Carg26850-RA vs. TrEMBL
Match: tr|A0A068TPE6|A0A068TPE6_COFCA (Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014476001 PE=4 SV=1)

HSP 1 Score: 246.5 bits (628), Expect = 6.1e-62
Identity = 111/147 (75.51%), Postives = 129/147 (87.76%), Query Frame = 0

Query: 1   MSIYSIQGQPLEVIVIGCTKLKDTEWISRQDPYVCLEYGSTNFRTTTCRDGGRNPIFQEK 60
           MSI  IQGQPLE+ V+GC+KLKDTEWISRQDPYVCLEY ST FRT T  DGG+NP FQEK
Sbjct: 1   MSISGIQGQPLEITVVGCSKLKDTEWISRQDPYVCLEYASTKFRTRTHTDGGKNPTFQEK 60

Query: 61  FVFSLIEGIREINVTVWNSNTVTYDDFIGNGKIQLAKVLAEGYDDSTWSLQTKTGRHAGE 120
           FVFSLIEG+REI V VWNSNT+TYDDFIGNGK+QL KVL++G+DDS+W LQTKTGRHAGE
Sbjct: 61  FVFSLIEGLREITVAVWNSNTITYDDFIGNGKVQLQKVLSQGFDDSSWPLQTKTGRHAGE 120

Query: 121 VRLILHFATADRLPANFAPSAPPFHAP 148
           VRLI+H+A A++   ++APSAPP+ AP
Sbjct: 121 VRLIMHYANANKPATSYAPSAPPYVAP 147

The following BLAST results are available for this feature:
Match NameE-valueIdentityDescription
XP_022927815.18.5e-11697.12elicitor-responsive protein 3-like isoform X2 [Cucurbita moschata][more]
XP_023531347.12.3e-11398.05elicitor-responsive protein 3-like isoform X2 [Cucurbita pepo subsp. pepo][more]
XP_022988903.12.3e-10597.93elicitor-responsive protein 3-like isoform X2 [Cucurbita maxima] >XP_022988904.1... [more]
XP_011658892.13.0e-7674.60PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis sativus] >KGN439... [more]
XP_008454977.11.5e-7268.72PREDICTED: leucine-rich repeat extensin-like protein 3 [Cucumis melo] >XP_008454... [more]
Match NameE-valueIdentityDescription
AT4G34150.11.8e-5166.42Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT1G63220.18.1e-1227.27Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT3G55470.15.5e-0831.13Calcium-dependent lipid-binding (CaLB domain) family protein[more]
AT3G07940.16.7e-0627.71Calcium-dependent ARF-type GTPase activating protein family[more]
Match NameE-valueIdentityDescription
sp|Q25AG5|ERG3_ORYSI6.0e-1229.37Elicitor-responsive protein 3 OS=Oryza sativa subsp. indica OX=39946 GN=ERG3 PE=... [more]
sp|Q0JBH9|ERG3_ORYSJ6.0e-1229.37Elicitor-responsive protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG3 P... [more]
sp|Q9C8S6|Y1322_ARATH1.5e-1027.27C2 domain-containing protein At1g63220 OS=Arabidopsis thaliana OX=3702 GN=At1g63... [more]
sp|A2WWV5|ERG1_ORYSI6.2e-0926.12Elicitor-responsive protein 1 OS=Oryza sativa subsp. indica OX=39946 GN=ERG1 PE=... [more]
sp|Q0JHU5|ERG1_ORYSJ6.2e-0926.12Elicitor-responsive protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=ERG1 P... [more]
Match NameE-valueIdentityDescription
tr|A0A0A0K6H5|A0A0A0K6H5_CUCSA2.0e-7674.60Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G073380 PE=4 SV=1[more]
tr|A0A1S4E0J9|A0A1S4E0J9_CUCME1.0e-7268.72leucine-rich repeat extensin-like protein 3 OS=Cucumis melo OX=3656 GN=LOC103495... [more]
tr|A0A200PV28|A0A200PV28_9MAGN1.7e-6465.57C2 calcium-dependent membrane targeting OS=Macleaya cordata OX=56857 GN=BVC80_89... [more]
tr|D7UC14|D7UC14_VITVI2.2e-6466.13Uncharacterized protein OS=Vitis vinifera OX=29760 GN=VIT_03s0180g00030 PE=4 SV=... [more]
tr|A0A068TPE6|A0A068TPE6_COFCA6.1e-6275.51Uncharacterized protein OS=Coffea canephora OX=49390 GN=GSCOC_T00014476001 PE=4 ... [more]
The following terms have been associated with this mRNA:
Vocabulary: INTERPRO
TermDefinition
IPR035892C2_domain_sf
IPR000008C2_dom
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg26850Carg26850gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg26850-RACarg26850-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg26850-RA.exon.1Carg26850-RA.exon.1exon
Carg26850-RA.exon.2Carg26850-RA.exon.2exon
Carg26850-RA.exon.3Carg26850-RA.exon.3exon
Carg26850-RA.exon.4Carg26850-RA.exon.4exon
Carg26850-RA.exon.5Carg26850-RA.exon.5exon
Carg26850-RA.exon.6Carg26850-RA.exon.6exon
Carg26850-RA.exon.7Carg26850-RA.exon.7exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg26850-RA.five_prime_UTR.1Carg26850-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg26850-RA.CDS.1Carg26850-RA.CDS.1CDS
Carg26850-RA.CDS.2Carg26850-RA.CDS.2CDS
Carg26850-RA.CDS.3Carg26850-RA.CDS.3CDS
Carg26850-RA.CDS.4Carg26850-RA.CDS.4CDS
Carg26850-RA.CDS.5Carg26850-RA.CDS.5CDS
Carg26850-RA.CDS.6Carg26850-RA.CDS.6CDS
Carg26850-RA.CDS.7Carg26850-RA.CDS.7CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg26850-RA.three_prime_UTR.1Carg26850-RA.three_prime_UTR.1three_prime_UTR


Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR000008C2 domainSMARTSM00239C2_3ccoord: 10..107
e-value: 1.4E-12
score: 57.8
IPR000008C2 domainPFAMPF00168C2coord: 11..108
e-value: 3.0E-14
score: 53.1
IPR000008C2 domainPROSITEPS50004C2coord: 1..92
score: 12.75
IPR035892C2 domain superfamilyGENE3DG3DSA:2.60.40.150coord: 10..129
e-value: 7.3E-23
score: 83.2
NoneNo IPR availablePANTHERPTHR10024SYNAPTOTAGMINcoord: 1..232
NoneNo IPR availablePANTHERPTHR10024:SF345SUBFAMILY NOT NAMEDcoord: 1..232
NoneNo IPR availableCDDcd00030C2coord: 11..108
e-value: 1.08873E-19
score: 80.1887
NoneNo IPR availableSUPERFAMILYSSF49562C2 domain (Calcium/lipid-binding domain, CaLB)coord: 8..128