Carg26807 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideexonCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.ATGGCAGAAGCACAGGGACAGAAGAGAAAAATGGCGGGTAGAAGAAGGGAGGGAGATTCGAAGAAAACAGCCCCATCTTCCCACCCATCTTCCCAGTGGCCAGCCATTAAACCCAAGCAGGATCTTCAGATCAATCGCCTCAAAGAAAATGATCTTTTCACCGTAAGAATTCAGATCATAATTGCCTTTGAACTCTCCATTTCTTAATAGGTTTTCATTTTGTTCATCTTCATTCTTCTTCAATCCCTCAATTTCTTCCTTTCTCTGTTTTTCATTCATCTTTCCCCGTTCTCGCTAGTGGATTACTTTTTACTGTCGAGATTATATCGTGAAATGGCTTCTTGACGCAACTTGCAAGATTTCTTGCCATACCCATTTCAATTTTCCATTTTCTGAATTCTATTACAGAAGCAATTACCTAAATTTGATTCTCAACAATTTTCAAATGTATCTGATAACTAGCTAATTCCATATGCTTTGCTTCAGTACTTTTTGGTGTGGGAATGAATGTAATAGTTGAATATATGCAGGTACCAAGTTTTTTCACAAGTGTTGAGTCAAAAGCATTCATCAAGACGGCAGAGTCGATGGGTTTTGTTCATCAGGGGAGCCTCGGTCCTTCTAAAGGAGAAGCTTATAGAGATAATGATCGAATCTCGGTGAATGATCCTGATTTAGCAGACACCATTTGGCGTTCGGGACTTGATAAACAATTTGCTGATATTAAAATACGGGGAAAAGTTGCTGTTGGGTTGAATCCAAATATCAGATTTTACAGGTGACTTCAGCTTTACTTTCTTATCAAGCTACTATGCTTTTAGGGGAGTGTTGGCTCATTACAAAGCATTCGATACTTATGGATGAATTGGAAACGATTAAGTGTTACATGGATACACATGCTTATTCTTCTTGCCTTCAAGTTTCAAATTATATCAATCTAAGTTGAGCTATAATGCACAGATTATACTTCGTTTTCCTACTACTTTGAATGGATCAAGCATGCTTATTAACTTTCCTATAACTATCATAGTCTGCCCTTAACAAACACCTTGGTATAACAATGGTATTTCAGATACAACGTTGGGCAGCGCTTTGGACGTCATATTGATGAAAGTGTTGATCTTGGAGAAGGCAAGCGAACGTACTATACTTTGTTAATATATTTAAGTGGAGGTTCCAAAACTAAGACAAAAAATGATACCAACAATTCCAAAGATCCTTCTTCTGAGCCTCTAGTTGGTGGGGAAACTGTTTTCTATGGTTGGAGGAATGTCGTTGTGGCTGAGGTGAATTCCCTATTTTTATTTCCAGTTTCTTTGCTCCATTTACTTGCAATGTTCCTTATTATCACTCACGAACTTGCATGAGAGTCACCTTATTCGTCTTCTTGTCTTTCCCTTTTCCTGGTATTTCAAGTTCCTTGCATTTTTGTTTTTCTTTGCTTTGGTAGGTGGCTCCTACTGAAGGGATGGCTCTTCTGCATCTTCATGGAGACAAGTGTTTGTTGCATGAAGCTCGCAATGTTACCAAGGGTGTCAAATATGTTTTCCGTTCAGACGTCATATTTTCTTGACGATAAGTTTAGGTAATTCTGTTGATTCATTGGTTGAGTTTCATGTTATTTGGCAGTATTTGTAACCTAGCCTTCTCTTTTCTTCCCTAGTTCCATTTTATTTGTCCACAATTGATATATTTCATCGACTAATACATATAATTGATGATAGGTTGTCAGTCTCGACGAAAAATAATTGAATTACCTACACATGGTTAAGATTGTGCTATTGACTTGGTTATCTACAGGCCCCATGATGTCGTGAAAACTGCCAAACAGGTCACTAAGGTATCCTCCTCATTTGATTCAATGTCTAAACACCAGATTTTATATTGTAAAAGAGCTCGTCCAAAGTTGATTTTCTTGCGTCCAGGTTGGTCCCTGGAATAGCTAAAGAATTCAGTGTATCACTACTTGAAATGGAACTGTTCATAGTCTTATAAGCTGTATTACTTGGTGGCTTGTTGAACTATATGACATTCTACTGCATATGCCACTGATATATGCTGTTTGTTATATTTACCTTCTTTCCTTTTCTGCCAAAGGAATTTTATTTTCTAAATTTGATGCTTCATCTCGTGTCATGATTGTAGTTCAAAATTTCCATCTTTTTGTGGCTTTTGAATTAGGGCATTACAAAATGGTTCATTTTTATCGTATTCAGAAACTTAGATTTATAGGACGGGTGAGTGTATTGTTTGAAAAAAACTCTTCTTGATTGAAGAGTTGTGTTCAA ATGGCAGAAGCACAGGGACAGAAGAGAAAAATGGCGGGTAGAAGAAGGGAGGGAGATTCGAAGAAAACAGCCCCATCTTCCCACCCATCTTCCCAGTGGCCAGCCATTAAACCCAAGCAGGATCTTCAGATCAATCGCCTCAAAGAAAATGATCTTTTCACCGTACCAAGTTTTTTCACAAGTGTTGAGTCAAAAGCATTCATCAAGACGGCAGAGTCGATGGGTTTTGTTCATCAGGGGAGCCTCGGTCCTTCTAAAGGAGAAGCTTATAGAGATAATGATCGAATCTCGGTGAATGATCCTGATTTAGCAGACACCATTTGGCGTTCGGGACTTGATAAACAATTTGCTGATATTAAAATACGGGGAAAAGTTGCTGTTGGGTTGAATCCAAATATCAGATTTTACAGATACAACGTTGGGCAGCGCTTTGGACGTCATATTGATGAAAGTGTTGATCTTGGAGAAGGCAAGCGAACGTACTATACTTTGTTAATATATTTAAGTGGAGGTTCCAAAACTAAGACAAAAAATGATACCAACAATTCCAAAGATCCTTCTTCTGAGCCTCTAGTTGGTGGGGAAACTGTTTTCTATGGTTGGAGGAATGTCGTTGTGGCTGAGGTGGCTCCTACTGAAGGGATGGCTCTTCTGCATCTTCATGGAGACAAGTGTTTGTTGCATGAAGCTCGCAATGTTACCAAGGGTGTCAAATATGTTTTCCGTTCAGACGTCATATTTTCTTGACGATAAGTTTAGGTTGTCAGTCTCGACGAAAAATAATTGAATTACCTACACATGGTTAAGATTGTGCTATTGACTTGGTTATCTACAGGCCCCATGATGTCGTGAAAACTGCCAAACAGGTCACTAAGGTATCCTCCTCATTTGATTCAATGTCTAAACACCAGATTTTATATTGTAAAAGAGCTCGTCCAAAGTTGATTTTCTTGCGTCCAGGTTGGTCCCTGGAATAGCTAAAGAATTCAGTGTATCACTACTTGAAATGGAACTGTTCATAGTCTTATAAGCTGTATTACTTGGTGGCTTGTTGAACTATATGACATTCTACTGCATATGCCACTGATATATGCTGTTTGTTATATTTACCTTCTTTCCTTTTCTGCCAAAGGAATTTTATTTTCTAAATTTGATGCTTCATCTCGTGTCATGATTGTAGTTCAAAATTTCCATCTTTTTGTGGCTTTTGAATTAGGGCATTACAAAATGGTTCATTTTTATCGTATTCAGAAACTTAGATTTATAGGACGGGTGAGTGTATTGTTTGAAAAAAACTCTTCTTGATTGAAGAGTTGTGTTCAA ATGGCAGAAGCACAGGGACAGAAGAGAAAAATGGCGGGTAGAAGAAGGGAGGGAGATTCGAAGAAAACAGCCCCATCTTCCCACCCATCTTCCCAGTGGCCAGCCATTAAACCCAAGCAGGATCTTCAGATCAATCGCCTCAAAGAAAATGATCTTTTCACCGTACCAAGTTTTTTCACAAGTGTTGAGTCAAAAGCATTCATCAAGACGGCAGAGTCGATGGGTTTTGTTCATCAGGGGAGCCTCGGTCCTTCTAAAGGAGAAGCTTATAGAGATAATGATCGAATCTCGGTGAATGATCCTGATTTAGCAGACACCATTTGGCGTTCGGGACTTGATAAACAATTTGCTGATATTAAAATACGGGGAAAAGTTGCTGTTGGGTTGAATCCAAATATCAGATTTTACAGATACAACGTTGGGCAGCGCTTTGGACGTCATATTGATGAAAGTGTTGATCTTGGAGAAGGCAAGCGAACGTACTATACTTTGTTAATATATTTAAGTGGAGGTTCCAAAACTAAGACAAAAAATGATACCAACAATTCCAAAGATCCTTCTTCTGAGCCTCTAGTTGGTGGGGAAACTGTTTTCTATGGTTGGAGGAATGTCGTTGTGGCTGAGGTGGCTCCTACTGAAGGGATGGCTCTTCTGCATCTTCATGGAGACAAGTGTTTGTTGCATGAAGCTCGCAATGTTACCAAGGGTGTCAAATATGTTTTCCGTTCAGACGTCATATTTTCTTGA MAEAQGQKRKMAGRRREGDSKKTAPSSHPSSQWPAIKPKQDLQINRLKENDLFTVPSFFTSVESKAFIKTAESMGFVHQGSLGPSKGEAYRDNDRISVNDPDLADTIWRSGLDKQFADIKIRGKVAVGLNPNIRFYRYNVGQRFGRHIDESVDLGEGKRTYYTLLIYLSGGSKTKTKNDTNNSKDPSSEPLVGGETVFYGWRNVVVAEVAPTEGMALLHLHGDKCLLHEARNVTKGVKYVFRSDVIFS
BLAST of Carg26807 vs. NCBI nr
Match: XP_023541473.1 (uncharacterized protein LOC111801646 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 503.8 bits (1296), Expect = 3.3e-139 Identity = 248/248 (100.00%), Postives = 248/248 (100.00%), Query Frame = 0
BLAST of Carg26807 vs. NCBI nr
Match: XP_022945055.1 (uncharacterized protein LOC111449413 [Cucurbita moschata] >XP_022945056.1 uncharacterized protein LOC111449413 [Cucurbita moschata]) HSP 1 Score: 502.3 bits (1292), Expect = 9.5e-139 Identity = 247/248 (99.60%), Postives = 247/248 (99.60%), Query Frame = 0
BLAST of Carg26807 vs. NCBI nr
Match: XP_022968459.1 (uncharacterized protein LOC111467697 [Cucurbita maxima] >XP_022968460.1 uncharacterized protein LOC111467697 [Cucurbita maxima]) HSP 1 Score: 496.1 bits (1276), Expect = 6.8e-137 Identity = 244/248 (98.39%), Postives = 244/248 (98.39%), Query Frame = 0
BLAST of Carg26807 vs. NCBI nr
Match: XP_022140818.1 (uncharacterized protein LOC111011396 [Momordica charantia]) HSP 1 Score: 436.8 bits (1122), Expect = 4.9e-119 Identity = 218/247 (88.26%), Postives = 228/247 (92.31%), Query Frame = 0
BLAST of Carg26807 vs. NCBI nr
Match: XP_004150303.1 (PREDICTED: uncharacterized protein LOC101210552 [Cucumis sativus] >KGN57327.1 hypothetical protein Csa_3G179170 [Cucumis sativus]) HSP 1 Score: 428.3 bits (1100), Expect = 1.7e-116 Identity = 214/248 (86.29%), Postives = 223/248 (89.92%), Query Frame = 0
BLAST of Carg26807 vs. TAIR10
Match: AT5G51880.1 (2-oxoglutarate (2OG) and Fe(II)-dependent oxygenase superfamily protein) HSP 1 Score: 307.0 bits (785), Expect = 1.1e-83 Identity = 151/221 (68.33%), Postives = 171/221 (77.38%), Query Frame = 0
BLAST of Carg26807 vs. TrEMBL
Match: tr|A0A0A0L9L9|A0A0A0L9L9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G179170 PE=4 SV=1) HSP 1 Score: 428.3 bits (1100), Expect = 1.2e-116 Identity = 214/248 (86.29%), Postives = 223/248 (89.92%), Query Frame = 0
BLAST of Carg26807 vs. TrEMBL
Match: tr|A0A1S3AY48|A0A1S3AY48_CUCME (uncharacterized protein LOC103484033 OS=Cucumis melo OX=3656 GN=LOC103484033 PE=4 SV=1) HSP 1 Score: 421.8 bits (1083), Expect = 1.1e-114 Identity = 211/248 (85.08%), Postives = 220/248 (88.71%), Query Frame = 0
BLAST of Carg26807 vs. TrEMBL
Match: tr|A0A2C9UI16|A0A2C9UI16_MANES (Uncharacterized protein OS=Manihot esculenta OX=3983 GN=MANES_14G030600 PE=4 SV=1) HSP 1 Score: 384.4 bits (986), Expect = 1.9e-103 Identity = 193/248 (77.82%), Postives = 215/248 (86.69%), Query Frame = 0
BLAST of Carg26807 vs. TrEMBL
Match: tr|A0A2I4FGS9|A0A2I4FGS9_9ROSI (uncharacterized protein LOC108998660 OS=Juglans regia OX=51240 GN=LOC108998660 PE=4 SV=1) HSP 1 Score: 376.3 bits (965), Expect = 5.2e-101 Identity = 189/248 (76.21%), Postives = 210/248 (84.68%), Query Frame = 0
BLAST of Carg26807 vs. TrEMBL
Match: tr|A0A061G7M6|A0A061G7M6_THECC (2-oxoglutarate and Fe(II)-dependent oxygenase superfamily protein isoform 1 OS=Theobroma cacao OX=3641 GN=TCM_015052 PE=4 SV=1) HSP 1 Score: 375.9 bits (964), Expect = 6.8e-101 Identity = 187/248 (75.40%), Postives = 213/248 (85.89%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
|