Carg25818 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR Hold the cursor over a type above to highlight its positions in the sequence below.TCAACCTCTGAATACATTTCTCAAAAACCTGATTCCCTCATTCTTCTTCGTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGGTACGTTGGAGCTATTGTTTTTGCTGGTTCATCATCTATTTTACTTGTACCGAATTGATATATATGGTGCGATAGTAATTATGATGATGTTGATATCTTTGGTTAGATTTTTGCGTTGTTTTGGGAAATATTGTTGTTCATTGTGGATCAGGAAGCATTGGTATTATACTTCACAAAGGGCAGGCATGTTGTGCTAGTTATCATTACGATAAAATCCATGTTCTGATTTGCTTTGCTATATTGTAGAACTGGGATATTTGTTGATTCCTGTTCTTCAAAATTTTATAGAAAGATATGGTCAGGGAATATTACTCCTCTTTAGTTCATTGTTTTCCTACCTGCCAGTCAAAAATTAGTATTAGATTAATGTTTTGTGGTGGAAACATGCAGTTTTTGCTGATTTAGAAGAAATCATTGGAGAGGAATGTAAAATTTGCGATAGAATTTGGAGTTGTAGAGACGTGGTAATGGAGTGAATATTCTGGACATTGAACTAATGCTATCCCTGTTTTTCTTTTAAGAATAACGTGTTCATTGTGGCTGTATTGTTGGTCGAGCCATATCTTATTGCATTCTTGTGTTTGTGCTCTCCGAGTGAGTGATGTGTGCGGATAGCATTCTGAAAGTTGAATAGATTGTCATGTCTATTATTGTTAGTTGCAAAGATTTGGCACTGATTAAGGGAATTATTGAAGGAGACTGCCTTAATGTAGTTGTCTACATGTTAACTAATACCTAATACCATTATAACAGCCCAAGTCCACCGCTAGCAAATATTGTCCTCTTTGGGCTTCCCCTCAAGGTTTTTAAAACGCGTCTGCTAGGAAGAGGTTTTCACACCCTAATAAATAATACTTCATTCTCCCCAACCGATGTGGGATCTCACAATCCAGCGTCCTCGCTGGCACTCGTTCCCTTCTCCAATCGATGTGGGACCCCCCAATCTACCCTCCTTCAGAACCTAGTGTCCTTGCTGGCACACCGCCTCGTATCCACCTCTTTCAAGGCTTAGCCTTCTCGTTGGCACATCGCCCAATGTCTAGTTCTGATTTCATTTGTAATATGGTAATTTCTCCTTCCCACCCCAAATGGTGCAAAATTACTAGTCACCTTGGGGTAACCTCCTTGAATAATTAAGATCTTATGCATTCTCACATCTTTGGAATCAACTTATATCAATAAGATGAGTATTCATGTTTAAACTCTAACCTTCATGATTTTTATTCAAATTACAATGCATTTTTCTTTGATATTTCACCAGGCTGCTTTGCATTCGTCAGAATTTTATATTATTATATGGAAGTTCTTCATAATCTAGCCATAGTTACAAGTCATATGTTTTTAATAAGAGGTTGCATCTTTGGATTGTCAATAATTTCAGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGCCTGGTAAATTTTCTCTACTACTTGTGGATTGCTTTTATTTTGTATAGTCTTTGTTTCCTGATAGTCCTGTCTGATGGGGAAAGGAGGCTAAAATAGCTCACAGAAGTATTTAGCCTCCAATCCTTCCAAGTAGAATTCTGAATTTGAGGGAGGGAGATTGTTGTAGAAATATTTAGCCTCCAATCCTTCAAATCTATACTATTATCTGAGTTTAAGTGAGGGAGATTGTTGCAAGTTTCTTTTTAATCTCTATATGAAGTATATTACTGGTTCTGGCTGTGGTTGGTTTTGGCTACTCACATAAAGAAGTGTTGTTTTTGTTGTCTTGTCCTTATAGCCATAAAATTTTTGCTTGTAAATGTACATTGCAAAAGTGATCTTTTAGTAGTTAAAGAGGTTTCACATGTATCTTATATAGCTGACATTTTCATTCATTTGATGTTTATATATAGATTCATATTATTCTTCAATTACCATTCACATGTAAATTGTATTATGAAGTTTAAAGACACATAATTTTGTAGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATTAAGAAAAAGGCTATTCAATTGGCATGAATTTAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTATTATAGTTATTTCAAATGTCTTGTGGTTCTTTTCTCGTCTTCAAAACTCTTTTACTTTTCCATTCCAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGATCCCAAGTCCCAAATCCTACGTCCGTTGAGAACATTTCGATTTTGACTTGGACAAAATTGCAAGTACGAGAACAAGTATGATATATATATATATAAAAAAAGAAAAAACATGAAAGGCAATTATCAAAGGTTTGCTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAAAAATTACAGGATCGATGATCTCAATGAGTCCAGTCTCCATTTTGTGACTGATTATTATCAACAGTTAGAATTAAAGTTTGACTGACTAAATCCA TCAACCTCTGAATACATTTCTCAAAAACCTGATTCCCTCATTCTTCTTCGTCAATTTCCACCATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGAATGAAGCACAGAATCTTCAGCTTGAAGACGGGGAACTAAGGGCAACATCATAGATTTAGCAATAAAGAAATATCGTGGCAAGAGTCTGGCTTTGCTGGCCTGGAAAAAAGGAAAAGGAATCGTATTCAGGTGCAAGAACCAATCGATGAAGATTAAGAAAAAGGCTATTCAATTGGCATGAATTTAGGTATAGGATGATGGGTACAATAATTTACTTGTTGACCAATTTTATTATAGTTATTTCAAATGTCTTGTGGTTCTTTTCTCGTCTTCAAAACTCTTTTACTTTTCCATTCCAGCCACGCTCGGTTGATTGACGCTCTTCTAGGCTTATCTTGCATATAAATTCTCGGATCCCAAGTCCCAAATCCTACGTCCGTTGAGAACATTTCGATTTTGACTTGGACAAAATTGCAAGTACGAGAACAAGTATGATATATATATATATAAAAAAAGAAAAAACATGAAAGGCAATTATCAAAGGTTTGCTTACAGTGTAGAACACAATTTTGAGGCATTCAATCAAAAATTACAGGATCGATGATCTCAATGAGTCCAGTCTCCATTTTGTGACTGATTATTATCAACAGTTAGAATTAAAGTTTGACTGACTAAATCCA ATGATCCTCTCTATCTCTTCCCCTTTCTCACTCCTCTCTTTCATCCTATTCTTCGCCACTCCTCTCATCGCCGCTCCTGAGCCATCCACCATCTACGATCATCTGCATCGTCATGGCCTCCCCATTGGCCTCCTCCCCAAGAACATTACCAGATTCTCAATCGACTCTTCCACCGGCCGTTTTCAGGTCTTCCTCGACCAGCCCTGCAATGCCAAGTTCGAGAATGAGGTTCACTATGATTTCAACGTCTCCGGCAGGCTCGCCTACGGCCAGATCGCTGAATTGGCTGGAATTTCTTCGCAGGAGCTCTTTCTTTGGTTTCCTGTTAAGGGAATTCGTGTCGATTTGCACACCTCTGGTGTAATACATTTCGACGTCGGCGTTGTTGACAAACAGTTCTCTCTTTCTCTGTTTGAATCCCCGCCTGATTGCACTGCGGCTGATCCGGTTGATCGATCCGTCGCGTTGGATGGAGTTTCTCTCGGTTTGGATGGGGCGTTTTCATGA MILSISSPFSLLSFILFFATPLIAAPEPSTIYDHLHRHGLPIGLLPKNITRFSIDSSTGRFQVFLDQPCNAKFENEVHYDFNVSGRLAYGQIAELAGISSQELFLWFPVKGIRVDLHTSGVIHFDVGVVDKQFSLSLFESPPDCTAADPVDRSVALDGVSLGLDGAFS
BLAST of Carg25818 vs. NCBI nr
Match: XP_022946011.1 (uncharacterized protein LOC111450229 [Cucurbita moschata]) HSP 1 Score: 335.5 bits (859), Expect = 1.0e-88 Identity = 165/168 (98.21%), Postives = 168/168 (100.00%), Query Frame = 0
BLAST of Carg25818 vs. NCBI nr
Match: XP_022949506.1 (uncharacterized protein LOC111452833 [Cucurbita moschata] >XP_023524763.1 uncharacterized protein LOC111788601 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 282.7 bits (722), Expect = 8.0e-73 Identity = 136/158 (86.08%), Postives = 147/158 (93.04%), Query Frame = 0
BLAST of Carg25818 vs. NCBI nr
Match: XP_022998326.1 (uncharacterized protein LOC111492997 [Cucurbita maxima]) HSP 1 Score: 280.8 bits (717), Expect = 3.0e-72 Identity = 135/158 (85.44%), Postives = 147/158 (93.04%), Query Frame = 0
BLAST of Carg25818 vs. NCBI nr
Match: XP_004138912.1 (PREDICTED: uncharacterized protein LOC101222871 [Cucumis sativus] >KGN61366.1 hypothetical protein Csa_2G99990 [Cucumis sativus]) HSP 1 Score: 275.8 bits (704), Expect = 9.8e-71 Identity = 136/168 (80.95%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of Carg25818 vs. NCBI nr
Match: XP_008441719.1 (PREDICTED: uncharacterized protein LOC103485796 [Cucumis melo]) HSP 1 Score: 270.8 bits (691), Expect = 3.2e-69 Identity = 136/168 (80.95%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of Carg25818 vs. TAIR10
Match: AT5G16380.1 (Protein of unknown function, DUF538) HSP 1 Score: 171.0 bits (432), Expect = 6.2e-43 Identity = 85/146 (58.22%), Postives = 106/146 (72.60%), Query Frame = 0
BLAST of Carg25818 vs. TAIR10
Match: AT3G07470.1 (Protein of unknown function, DUF538) HSP 1 Score: 162.2 bits (409), Expect = 2.9e-40 Identity = 72/121 (59.50%), Postives = 94/121 (77.69%), Query Frame = 0
BLAST of Carg25818 vs. TAIR10
Match: AT3G07460.2 (Protein of unknown function, DUF538) HSP 1 Score: 150.6 bits (379), Expect = 8.6e-37 Identity = 74/138 (53.62%), Postives = 99/138 (71.74%), Query Frame = 0
BLAST of Carg25818 vs. TAIR10
Match: AT1G61667.1 (Protein of unknown function, DUF538) HSP 1 Score: 127.1 bits (318), Expect = 1.0e-29 Identity = 59/130 (45.38%), Postives = 80/130 (61.54%), Query Frame = 0
BLAST of Carg25818 vs. TAIR10
Match: AT5G54530.1 (Protein of unknown function, DUF538) HSP 1 Score: 122.1 bits (305), Expect = 3.3e-28 Identity = 63/139 (45.32%), Postives = 86/139 (61.87%), Query Frame = 0
BLAST of Carg25818 vs. Swiss-Prot
Match: sp|Q9M015|Y5161_ARATH (Uncharacterized protein At5g01610 OS=Arabidopsis thaliana OX=3702 GN=At5g01610 PE=1 SV=1) HSP 1 Score: 46.6 bits (109), Expect = 3.2e-04 Identity = 23/96 (23.96%), Postives = 47/96 (48.96%), Query Frame = 0
BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A0A0LN19|A0A0A0LN19_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_2G99990 PE=4 SV=1) HSP 1 Score: 275.8 bits (704), Expect = 6.5e-71 Identity = 136/168 (80.95%), Postives = 148/168 (88.10%), Query Frame = 0
BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A1S3B435|A0A1S3B435_CUCME (uncharacterized protein LOC103485796 OS=Cucumis melo OX=3656 GN=LOC103485796 PE=4 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 2.1e-69 Identity = 136/168 (80.95%), Postives = 143/168 (85.12%), Query Frame = 0
BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A2P5EUA5|A0A2P5EUA5_9ROSA (Uncharacterized protein OS=Trema orientalis OX=63057 GN=TorRG33x02_149700 PE=4 SV=1) HSP 1 Score: 211.1 bits (536), Expect = 2.0e-51 Identity = 100/137 (72.99%), Postives = 114/137 (83.21%), Query Frame = 0
BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A067K3P8|A0A067K3P8_JATCU (Uncharacterized protein OS=Jatropha curcas OX=180498 GN=JCGZ_18043 PE=4 SV=1) HSP 1 Score: 208.4 bits (529), Expect = 1.3e-50 Identity = 99/156 (63.46%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of Carg25818 vs. TrEMBL
Match: tr|A0A2P5CDH9|A0A2P5CDH9_PARAD (Uncharacterized protein OS=Parasponia andersonii OX=3476 GN=PanWU01x14_162380 PE=4 SV=1) HSP 1 Score: 208.0 bits (528), Expect = 1.7e-50 Identity = 98/137 (71.53%), Postives = 114/137 (83.21%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |