BLAST of Carg23566-RA vs. NCBI nr
Match:
XP_022923334.1 (replication protein A 70 kDa DNA-binding subunit A-like [Cucurbita moschata])
HSP 1 Score: 1681.8 bits (4354), Expect = 0.0e+00
Identity = 832/833 (99.88%), Postives = 832/833 (99.88%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH
Sbjct: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
Query: 121 PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW 180
PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW
Sbjct: 121 PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW 180
Query: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK 240
TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK
Sbjct: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK 240
Query: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT 300
NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT
Sbjct: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT 300
Query: 301 CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI 360
CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI
Sbjct: 301 CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI 360
Query: 361 PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV
Sbjct: 361 PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
Query: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA 480
ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA
Sbjct: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA 480
Query: 481 RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF 540
RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF
Sbjct: 481 RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF 540
Query: 541 VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL
Sbjct: 541 VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
Query: 601 TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE
Sbjct: 601 TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
Query: 661 QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS 720
QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS
Sbjct: 661 QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS 720
Query: 721 TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP 780
TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP
Sbjct: 721 TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP 780
Query: 781 SVGGGMYLNRVSGSSGHDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR 834
SVGGGMYLNRVSGSSG DSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR
Sbjct: 781 SVGGGMYLNRVSGSSGRDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR 833
BLAST of Carg23566-RA vs. NCBI nr
Match:
XP_023553094.1 (replication protein A 70 kDa DNA-binding subunit A-like [Cucurbita pepo subsp. pepo])
HSP 1 Score: 1632.5 bits (4226), Expect = 0.0e+00
Identity = 812/833 (97.48%), Postives = 820/833 (98.44%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH
Sbjct: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
Query: 121 PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW 180
PATRSVSAAFSGNPQSSMGASSG+GI+GNVNVS ASFEQPKVNQSQVPHVGSHFNTPNS
Sbjct: 121 PATRSVSAAFSGNPQSSMGASSGNGIVGNVNVSAASFEQPKVNQSQVPHVGSHFNTPNSG 180
Query: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK 240
TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNA ++APPQPIHQQPPSMYSNRGGPVAK
Sbjct: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNA-SHAPPQPIHQQPPSMYSNRGGPVAK 240
Query: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT 300
NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDA GGEIRAT
Sbjct: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDAYGGEIRAT 300
Query: 301 CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI 360
CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQ CFEDDQSI
Sbjct: 301 CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQPCFEDDQSI 360
Query: 361 PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
PHQQFHFHHISEIEGM SNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV
Sbjct: 361 PHQQFHFHHISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
Query: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA 480
ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA
Sbjct: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA 480
Query: 481 RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF 540
RTLRGWFEKEGRSTPSVSISREVAT+GRTD RKTISQIKDERLGTSEKPDWITVSATVSF
Sbjct: 481 RTLRGWFEKEGRSTPSVSISREVATVGRTDARKTISQIKDERLGTSEKPDWITVSATVSF 540
Query: 541 VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
+KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL
Sbjct: 541 IKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
Query: 601 TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
TWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE
Sbjct: 601 TWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
Query: 661 QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS 720
QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPG ENIGGGQFVSPIRNS
Sbjct: 661 QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGSENIGGGQFVSPIRNS 720
Query: 721 TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP 780
TNNVGREYGT NRGVQYGDHHNSS P PSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP
Sbjct: 721 TNNVGREYGTSNRGVQYGDHHNSSRPIPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP 780
Query: 781 SVGGGMYLNRVSGSSGHDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR 834
SVGGG+YLNRVSGSSG DSGECFKCHQTGHW RDCPGLATFPPAYGNSGFTAR
Sbjct: 781 SVGGGIYLNRVSGSSGRDSGECFKCHQTGHWGRDCPGLATFPPAYGNSGFTAR 832
BLAST of Carg23566-RA vs. NCBI nr
Match:
XP_022965290.1 (LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like [Cucurbita maxima])
HSP 1 Score: 1605.5 bits (4156), Expect = 0.0e+00
Identity = 800/833 (96.04%), Postives = 809/833 (97.12%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
M ASMAPFKLTEGAVMVICKRESS ETFQPVVQVIDLK VNTTQQSGSERYRLLLSDGTH
Sbjct: 1 MAASMAPFKLTEGAVMVICKRESSEETFQPVVQVIDLKFVNTTQQSGSERYRLLLSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV
Sbjct: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
Query: 121 PATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSW 180
PATRSVSAAFSGNPQSS+GASSGSGI+GNVNVSGASFEQPKVNQSQVPHVG HFNTPNS
Sbjct: 121 PATRSVSAAFSGNPQSSVGASSGSGIVGNVNVSGASFEQPKVNQSQVPHVGFHFNTPNSG 180
Query: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK 240
TRFNGSSPVTGSYGDQKMAYHNNGSDIPR PLNAYAYAPPQPIHQQPPSMYSNRGGPVAK
Sbjct: 181 TRFNGSSPVTGSYGDQKMAYHNNGSDIPRSPLNAYAYAPPQPIHQQPPSMYSNRGGPVAK 240
Query: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRAT 300
NEAPPRIMPITALNPYQGRWTIKARVTSKGELR YNNPRGDGKVFSFDLLDA GGEIRAT
Sbjct: 241 NEAPPRIMPITALNPYQGRWTIKARVTSKGELRDYNNPRGDGKVFSFDLLDAYGGEIRAT 300
Query: 301 CFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSI 360
CF+ VADQFYNQIESG VYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQ CFEDDQSI
Sbjct: 301 CFDMVADQFYNQIESGNVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQPCFEDDQSI 360
Query: 361 PHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
PHQQFHFHHISEIEGM SNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV
Sbjct: 361 PHQQFHFHHISEIEGMDSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSV 420
Query: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEA 480
ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVS+FNGKAVGTISTSQLFVEPDFPEA
Sbjct: 421 ELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSNFNGKAVGTISTSQLFVEPDFPEA 480
Query: 481 RTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSF 540
RTLRGWFEKEGRSTPSVSISREVAT+GRTD R+TISQIKDERLGTSEKPDWITVSATVSF
Sbjct: 481 RTLRGWFEKEGRSTPSVSISREVATVGRTDARQTISQIKDERLGTSEKPDWITVSATVSF 540
Query: 541 VKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
+KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL
Sbjct: 541 IKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGL 600
Query: 601 TWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
TWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE
Sbjct: 601 TWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDE 660
Query: 661 QRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPIRNS 720
RVKSTVMKAESINF TESRFLLDLMEK RAGNTIQNPGVFRP ENIGGGQFVSPIRNS
Sbjct: 661 XRVKSTVMKAESINFLTESRFLLDLMEKFRAGNTIQNPGVFRPRSENIGGGQFVSPIRNS 720
Query: 721 TNNVGREYGTPNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAP 780
T +V REYGTPNRGVQYGDHHNS PTPSTLHNSRTYCNSCGG GHSSMNCPSIISSPAP
Sbjct: 721 T-DVSREYGTPNRGVQYGDHHNSCRPTPSTLHNSRTYCNSCGGLGHSSMNCPSIISSPAP 780
Query: 781 SVGGGMYLNRVSGSSGHDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR 834
SVGGGMYLNRVSGSSG DSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR
Sbjct: 781 SVGGGMYLNRVSGSSGRDSGECFKCHQTGHWARDCPGLATFPPAYGNSGFTAR 832
BLAST of Carg23566-RA vs. NCBI nr
Match:
XP_008448593.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo])
HSP 1 Score: 1413.7 bits (3658), Expect = 0.0e+00
Identity = 720/863 (83.43%), Postives = 769/863 (89.11%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
M ASMA KLTEGAVMVICKRESSAETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
+QQGMLGTQLN LVKSGKLQKGSIV+LRQYVCNPVQERLIIIVIELDVI+E+CD IGEPV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 PATRSVSAAFSGNPQSS---MGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTP 180
ATRS ++AFSGNP SS +GAS GSG++G NVSGASFEQPK NQS VPH+GS+ N P
Sbjct: 121 SATRSSASAFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNPP 180
Query: 181 NS-----------------WTRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPP 240
+ +RFNGSSP+TGSYGDQKMAYHN+GSD+PRPPLN+ AYA P
Sbjct: 181 ETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYARP 240
Query: 241 QPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
QP++QQPPSMYSNR GP+AKNEA PRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 QPMYQQPPSMYSNR-GPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDF 360
DGKVFSFDLLDA GEIR TCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHL ND+
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQ CFEDDQSIP QQFHFH I EIEGM SNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQ+LQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKD 540
KAVGTISTSQLF+EPDFPEA +LR WFE+EGRST SVSISREVA +GRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSF+KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEKL----------R 720
VLFTKFIMKLK+KEETFSDEQRV+STV+KAESI+FS+ESRFLL+LMEKL +
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNVGREYGTPNRGVQYGDHHNSSWPTPST 780
A +TI N G ENIGGGQFVSPIRNST N REYGTPN+GVQYG+ ++SS P+PST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNST-NFSREYGTPNQGVQYGNQYSSSRPSPST 780
Query: 781 LHNSRTYCNSCGGSGHSSMNCPSIISSPAPSVGGGMYLNRVSGSSGHDSGECFKCHQTGH 834
NS TYCNSCGGSGHSSMNCPSI+S PA SVGGGMY N+ SG S SGECFKCHQTGH
Sbjct: 781 PLNSNTYCNSCGGSGHSSMNCPSIMSGPALSVGGGMYSNQASGPSAGTSGECFKCHQTGH 840
BLAST of Carg23566-RA vs. NCBI nr
Match:
XP_004146122.1 (PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus] >KGN55692.1 hypothetical protein Csa_3G005560 [Cucumis sativus])
HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 721/863 (83.55%), Postives = 768/863 (88.99%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
M ASMA KLTEGAVMVICKRESSAETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
+QQGMLGTQLN LVKSGKLQKGSIV+LRQYVCNPVQERLIIIVIELDVI+EMCD IGEPV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
Query: 121 PATRSVSAAFSGNPQSS---MGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTP 180
ATRS + A SGNP S +GAS GSG++G NVS ASFEQPKVNQS VPH+GS+ N P
Sbjct: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180
Query: 181 -----------------NSWTRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPP 240
+S +RFNG SP+TGSYGDQKMAYHN+GSDIPRPPLN+ AYA P
Sbjct: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240
Query: 241 QPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
QPI+QQPPSMYSNR GP+AKNEA PRIMPI+ALNPYQGRWTIKARVTSKGELRHYNNPRG
Sbjct: 241 QPIYQQPPSMYSNR-GPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDF 360
DGKVFSFDLLDA GEIR TCFNTVADQFYNQIESGKVYFISKGSLKPAQKN+NHL ND+
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDY 360
Query: 361 EIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQ CFEDDQSIP QQFHFH I EIEGM SNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQ+LQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKD 540
KAVGTISTSQLF+EPDFPEA +LR WFE+EGRST SVSISREVA++GRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSF+KVD+FCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEKL----------R 720
VLFTKFIMKLK+KEETFSDEQRV+STV+KAESINFS+ESRFLL+LMEKL +
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPK 720
Query: 721 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNVGREYGTPNRGVQYGDHHNSSWPTPST 780
A +TI N G ENIGGGQFVSPIRNST N REYGTPN+GVQYG+ ++SS P+PST
Sbjct: 721 AESTIHNFGFRDTASENIGGGQFVSPIRNST-NFSREYGTPNQGVQYGNQYSSSRPSPST 780
Query: 781 LHNSRTYCNSCGGSGHSSMNCPSIISSPAPSVGGGMYLNRVSGSSGHDSGECFKCHQTGH 834
NS TYCNSCGGSGHSS NCPSI+S PA SVGGGMY N+ SG SG SGECFKCHQTGH
Sbjct: 781 PLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGH 840
BLAST of Carg23566-RA vs. TAIR10
Match:
AT4G19130.1 (Replication factor-A protein 1-related)
HSP 1 Score: 798.9 bits (2062), Expect = 3.0e-231
Identity = 423/769 (55.01%), Postives = 543/769 (70.61%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTHYQQGMLGT 69
LT GA+ I E + E PV+QV DLK + Q ER+R++LSDGT+ QGMLGT
Sbjct: 5 LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64
Query: 70 QLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPATR-SVS 129
LN LVK G LQ GSIV+L ++V + ++ R I+IV +L+V+K++ D IG PVP + +
Sbjct: 65 DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGKHNDQ 124
Query: 130 AAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSWTRFNGSS 189
+ + GSGI N+ E + N + P VG ++ + T +
Sbjct: 125 RGADSGIKFNTTEQQGSGIRQVNNI-----EPGRSNAAISPQVGGTGSSVPAST-----T 184
Query: 190 PVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAKNEAPPRI 249
P T +Y + D R P +Y + P Q PP MY+NR GPVA+NEAPP+I
Sbjct: 185 PSTRAYSNPSSGNGVTRQDYARDPPTSYPHQP-----QPPPPMYANR-GPVARNEAPPKI 244
Query: 250 MPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVAD 309
+P+ AL+PY GRWTIKARVT+K L+ Y+NPRG+GKVF+FDLLDA GGEIR TCFN VAD
Sbjct: 245 IPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVAD 304
Query: 310 QFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFHF 369
QFY+QI G +Y IS+GSL+PAQKN+NHL ND+EI L+N STI+ C+E+D +IP QFHF
Sbjct: 305 QFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHF 364
Query: 370 HHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGN 429
I +IE M +N +VDVIG+VSSI+P ++ RKNGT T KRSLQLKDMSGRSVE+T+WG+
Sbjct: 365 RTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGD 424
Query: 430 FCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGWF 489
FC AEGQ+LQ++CDSG+FPVLAVK+GR+S+FNGK V TI +SQLF++PDF EA L+ WF
Sbjct: 425 FCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWF 484
Query: 490 EKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVDNFC 549
E+EG+S P +S+SRE + G+ DVRKTISQIKDE+LGTSEKPDWITVSAT+ ++K DNFC
Sbjct: 485 EREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFC 544
Query: 550 YTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQ 609
YTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRYILQLQIQDHT LT VTAFQ
Sbjct: 545 YTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQ 604
Query: 610 EGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVKSTV 669
E GEEIMG+ AK LYY+K E +D+EKF +IIRKV FTK+ KLKVKEETFSDEQRVK+TV
Sbjct: 605 EAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATV 664
Query: 670 MKAESINFSTESRFLLDLMEKLR---AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNV 729
+K + +N+S ++R +L M+KLR A + NP + + G S R+ ++
Sbjct: 665 VKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYNADVVNTGIGSSGTRDPSSVQ 724
Query: 730 GREYGT-PNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCP 773
R++G ++ Q G+H++ T T CN CG SGH S CP
Sbjct: 725 RRDFGLHAHQSGQSGNHYSGGGAT--------TSCNVCGNSGHVSAKCP 749
BLAST of Carg23566-RA vs. TAIR10
Match:
AT5G45400.1 (Replication factor-A protein 1-related)
HSP 1 Score: 774.2 bits (1998), Expect = 7.9e-224
Identity = 432/849 (50.88%), Postives = 541/849 (63.72%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPVVQVIDLKLVNT---TQQSGSERYRLLLSDGTHYQQGM 69
LTEG VM + E ++ET PV+QV +LKL+ + Q S RY+ LLSDGT GM
Sbjct: 5 LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64
Query: 70 LGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEP-VPATR 129
L T LN LV G +Q GS+++L Y+CN +Q R I+++++L+VI E C+ IG P P
Sbjct: 65 LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124
Query: 130 SVSAAFSG-NPQSSMGASSGSGILGNVNVS--GASFEQPKVNQSQVPHVGSHFNTPNSWT 189
S++ G N QS+ G+ +VN G S
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSXXXXXXXXXXXXXXXXXXXXXXXXX 184
Query: 190 RFNGSSPVTGSYGDQKMAYHNNG------------------------------------- 249
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 250 -----------SDIPRPPLNAYAYAPPQPIHQQP--PSMYSNRGGPVAKNEAPPRIMPIT 309
D PR P AY+ P QP P MY NR GPVA+NEAPPRI PI
Sbjct: 245 XXXXXXXXXXRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNR-GPVARNEAPPRINPIA 304
Query: 310 ALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVADQFYN 369
ALNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA GGEIR TCFN DQF++
Sbjct: 305 ALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFD 364
Query: 370 QIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFHFHHIS 429
+I G VY IS+G+LKPAQKN+NHL ND+EI L++ STIQ C EDD +IP FHF +I
Sbjct: 365 KIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRYHFHFRNIG 424
Query: 430 EIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQA 489
+IE M +NS DVIG+VSSI+P ++MRKN TE QKRSLQLKDMSGRSVE+T+WGNFC A
Sbjct: 425 DIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNFCNA 484
Query: 490 EGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGWFEKEG 549
EGQKLQN+CDSG+FPVLA+K+GR+ +FNGK V TI SQ F+EPDFPEAR LR W+E+EG
Sbjct: 485 EGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREG 544
Query: 550 RSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVDNFCYTAC 609
R+ SISRE + +GR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV+NFCYTAC
Sbjct: 545 RNAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFCYTAC 604
Query: 610 PIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGE 669
PIM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW TAFQE GE
Sbjct: 605 PIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGE 664
Query: 670 EIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVKSTVMKAE 729
EIMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLK+KEET+SDEQRVK+TV+KAE
Sbjct: 665 EIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAE 724
Query: 730 SINFSTESRFLLDLMEKLRAGNTIQNP-----GVFRPGLENIGGGQFVSPIRNSTN-NVG 787
+N+S+ +RF+L+ ++KL+ G+ P +R N G G S R++ + +
Sbjct: 725 KLNYSSNTRFMLEAIDKLKIGDANSLPIKAESSNYRSDAFNSGVG--TSGTRDTASVDAR 784
BLAST of Carg23566-RA vs. TAIR10
Match:
AT2G06510.1 (replication protein A 1A)
HSP 1 Score: 688.3 bits (1775), Expect = 5.7e-198
Identity = 347/682 (50.88%), Postives = 468/682 (68.62%), Query Frame = 0
Query: 7 PFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTHYQQGML 66
P LT A+ I +P++QV+++K++ +Q+ ERYR L+SDG Q M+
Sbjct: 2 PVSLTPNAITAI---HDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMV 61
Query: 67 GTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPATRSV 126
QLN VKSG+ +KGSIVQL Y+C+ V+ R +I+V+ ++ I + + IG P
Sbjct: 62 AVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNP------- 121
Query: 127 SAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSWTRFNGS 186
F + SG+G + N F +P V S N +
Sbjct: 122 -TIFGETDTEAQKTFSGTGNIPPPN--RVVFNEPMVQHS-----------------VNRA 181
Query: 187 SPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAKNEAPPR 246
P G +I N ++ P+ Y N GP+ KNEAP R
Sbjct: 182 PP--------------RGVNIQNQANNTPSFXXXXXXXXXXPASYRNH-GPIMKNEAPAR 241
Query: 247 IMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVA 306
++PI ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFDLLD GGEIR TCFN +
Sbjct: 242 VIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALV 301
Query: 307 DQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFH 366
D+FY+ E GKVY ISKGSLKPAQKN+NHL N++EIFLE+TST++ C ++D SIP QQF
Sbjct: 302 DRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFS 361
Query: 367 FHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWG 426
F IS+IE +N+++DVIGVV+S+NP+ ++RKNG ET +R L LKD SG++VE+TLWG
Sbjct: 362 FRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWG 421
Query: 427 NFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGW 486
FC +G++L+ M DS PVLA+K+G+VSDF+GK+VGTIS++QLF+ PDFPEA LR W
Sbjct: 422 EFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTW 481
Query: 487 FEKEGRSTPSVSISREVATMG--RTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVD 546
F+ G+ T S SISR+ G R ++RK +SQIK+E LG S+KPDWITV AT+SF+K D
Sbjct: 482 FDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTD 541
Query: 547 NFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVT 606
+FCYTACP+MIGD+QC+KKVT +G +W CDRC+Q DECDYRY+LQ+QIQDHTGLTW+T
Sbjct: 542 SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWIT 601
Query: 607 AFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVK 666
AFQE GEEIMG PAK+LY +KYE + +E+FAEI+R LF ++++KLK+KEE++ DEQRVK
Sbjct: 602 AFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVK 638
Query: 667 STVMKAESINFSTESRFLLDLM 687
TV+K + +N+++ES+++LDL+
Sbjct: 662 MTVVKVDKVNYTSESKYMLDLL 638
BLAST of Carg23566-RA vs. TAIR10
Match:
AT5G08020.1 (RPA70-kDa subunit B)
HSP 1 Score: 299.3 bits (765), Expect = 7.5e-81
Identity = 164/461 (35.57%), Postives = 262/461 (56.83%), Query Frame = 0
Query: 237 PVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGE 296
P A+ R+ P+ +LNPYQG WTIK RVT+KG +R Y N RG+G VF+ +L D G +
Sbjct: 147 PAARMAMTRRVHPLVSLNPYQGSWTIKVRVTNKGVMRTYKNARGEGCVFNVELTDEEGTQ 206
Query: 297 IRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFED 356
I+AT FN A +FY++ E GKVY+IS+GSLK A K + + ND+E+ L S ++ +
Sbjct: 207 IQATMFNAAARKFYDRFEMGKVYYISRGSLKLANKQFKTVQNDYEMTLNENSEVEEASNE 266
Query: 357 DQSIPHQQFHFHHISEI-EGMGSNSVVDVIGVVSSINPATSLMRKNGTE-TQKRSLQLKD 416
+ P +F+F I E+ + ++DVIGVV S++P S+ RKN E KR + L D
Sbjct: 267 EMFTPETKFNFVPIDELGTYVNQKDLIDVIGVVQSVSPTMSIRRKNDNEMIPKRDITLAD 326
Query: 417 MSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVE 476
+ ++V ++LW + GQ+L +M D+ PV+A+KS +V F G ++ TIS S + +
Sbjct: 327 ETKKTVVVSLWNDLATGIGQELLDMADN--HPVIAIKSLKVGAFQGVSLSTISRSNVVIN 386
Query: 477 PDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKT------ISQIKDERLGTSEK 536
P+ PEA L+ W++ EG+ T +I +++ R +S I EK
Sbjct: 387 PNSPEATKLKSWYDAEGKETSMSAIGSGMSSSANNGSRSMYSDRVFLSHITSNPSLGEEK 446
Query: 537 PDWITVSATVSFVKVD-NFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYR 596
P + + A +SF+K D Y AC + C+KKVT D + C+ C + EC R
Sbjct: 447 PVFFSTRAYISFIKPDQTMWYRAC------KTCNKKVTEAMDSGYWCESCQKKDQECSLR 506
Query: 597 YILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFI 656
YI+ +++ D TG TW++AF + E+I+G A L LK EE + +F +++ ++ +
Sbjct: 507 YIMAVKVSDSTGETWLSAFNDEAEKIIGCTADDLNDLKSEEGEVNEFQTKLKEATWSSHL 566
Query: 657 MKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEK 689
++ V ++ ++ E+R + TV I+F+ E+R LL + K
Sbjct: 567 FRISVSQQEYNSEKRQRITVRGVSPIDFAAETRLLLQDISK 599
BLAST of Carg23566-RA vs. TAIR10
Match:
AT5G61000.1 (Replication factor-A protein 1-related)
HSP 1 Score: 296.6 bits (758), Expect = 4.8e-80
Identity = 161/465 (34.62%), Postives = 264/465 (56.77%), Query Frame = 0
Query: 230 MYSNRG--GPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSF 289
M RG P A+ R+ P+ +LNPYQG WTIK RVT+KG +R+Y N RG+G VF+
Sbjct: 162 MSEQRGNAAPAARMAMTRRVHPLVSLNPYQGNWTIKVRVTNKGVMRNYKNARGEGCVFNV 221
Query: 290 DLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENT 349
+L D G +I+AT FN A +F+++ + GKVY+IS+GSLK A K + + ND+E+ L
Sbjct: 222 ELTDEEGTQIQATMFNDAARKFFDRFQLGKVYYISRGSLKLANKQFKTVQNDYEMTLNEN 281
Query: 350 STIQACFEDDQSIPHQQFHFHHISEIE-GMGSNSVVDVIGVVSSINPATSLMRKNGTE-T 409
S ++ ++ IP +F+F I E+ + ++D+IGVV S++P S+ R+ E
Sbjct: 282 SEVEEASSEEMFIPETKFNFVPIEELGLYVNQKELIDLIGVVQSVSPTMSIRRRTDNEMI 341
Query: 410 QKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGT 469
KR + L D S ++V ++LW + GQ+L +M D PV+A+KS +V DF G ++ T
Sbjct: 342 PKRDITLADESRKTVVVSLWNDLATGIGQELLDMADQS--PVIAIKSLKVGDFQGVSLST 401
Query: 470 ISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRK------TISQIK 529
IS S + + P+ PEA+ L+ WF+ EG+ SI ++ + R +S I
Sbjct: 402 ISRSNVVINPESPEAKKLKSWFDSEGKEISMSSIGSGMSPSAKNGSRSLYTDRVLLSHIT 461
Query: 530 DERLGTSEKPDWITVSATVSFVKVD-NFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCD 589
EKP + + A +SF+K D Y AC + C+KKVT D + C+ C
Sbjct: 462 SNPSLFEEKPVFFSTRAYISFIKPDQTMWYQAC------KTCNKKVTEALDSGYWCEGCQ 521
Query: 590 QSVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEII 649
+ +EC RYI+ +++ D +G TW+++F + E+I+G A L LK EE + ++ +
Sbjct: 522 RKYEECSLRYIMAVKVTDSSGETWISSFNDEAEKILGCSADELNKLKSEEGEVNEYQTKL 581
Query: 650 RKVLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLL 684
++ ++ + ++ V + ++ E+R + TV ++F+ E+R LL
Sbjct: 582 KEATWSSHVFRVSVTQNEYNGEKRQRVTVKGVAPLDFAAETRLLL 618
BLAST of Carg23566-RA vs. Swiss-Prot
Match:
sp|F4JSG3|RFA1E_ARATH (Replication protein A 70 kDa DNA-binding subunit E OS=Arabidopsis thaliana OX=3702 GN=RPA1E PE=2 SV=1)
HSP 1 Score: 798.9 bits (2062), Expect = 5.4e-230
Identity = 423/769 (55.01%), Postives = 543/769 (70.61%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTHYQQGMLGT 69
LT GA+ I E + E PV+QV DLK + Q ER+R++LSDGT+ QGMLGT
Sbjct: 5 LTAGAIGKIMNGEVTTEADMIPVLQVTDLKQIMAQQDPTRERFRMVLSDGTYLHQGMLGT 64
Query: 70 QLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPATR-SVS 129
LN LVK G LQ GSIV+L ++V + ++ R I+IV +L+V+K++ D IG PVP + +
Sbjct: 65 DLNNLVKEGTLQPGSIVRLTRFVGDVIKGRRIVIVPQLEVLKQISDIIGHPVPGGKHNDQ 124
Query: 130 AAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSWTRFNGSS 189
+ + GSGI N+ E + N + P VG ++ + T +
Sbjct: 125 RGADSGIKFNTTEQQGSGIRQVNNI-----EPGRSNAAISPQVGGTGSSVPAST-----T 184
Query: 190 PVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAKNEAPPRI 249
P T +Y + D R P +Y + P Q PP MY+NR GPVA+NEAPP+I
Sbjct: 185 PSTRAYSNPSSGNGVTRQDYARDPPTSYPHQP-----QPPPPMYANR-GPVARNEAPPKI 244
Query: 250 MPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVAD 309
+P+ AL+PY GRWTIKARVT+K L+ Y+NPRG+GKVF+FDLLDA GGEIR TCFN VAD
Sbjct: 245 IPVNALSPYSGRWTIKARVTNKAALKQYSNPRGEGKVFNFDLLDADGGEIRVTCFNAVAD 304
Query: 310 QFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFHF 369
QFY+QI G +Y IS+GSL+PAQKN+NHL ND+EI L+N STI+ C+E+D +IP QFHF
Sbjct: 305 QFYDQIVVGNLYLISRGSLRPAQKNFNHLRNDYEIMLDNASTIKQCYEEDAAIPRHQFHF 364
Query: 370 HHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGN 429
I +IE M +N +VDVIG+VSSI+P ++ RKNGT T KRSLQLKDMSGRSVE+T+WG+
Sbjct: 365 RTIGDIESMENNCIVDVIGIVSSISPTVTITRKNGTATPKRSLQLKDMSGRSVEVTMWGD 424
Query: 430 FCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGWF 489
FC AEGQ+LQ++CDSG+FPVLAVK+GR+S+FNGK V TI +SQLF++PDF EA L+ WF
Sbjct: 425 FCNAEGQRLQSLCDSGVFPVLAVKAGRISEFNGKTVSTIGSSQLFIDPDFVEAEKLKNWF 484
Query: 490 EKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVDNFC 549
E+EG+S P +S+SRE + G+ DVRKTISQIKDE+LGTSEKPDWITVSAT+ ++K DNFC
Sbjct: 485 EREGKSVPCISLSREFSGSGKVDVRKTISQIKDEKLGTSEKPDWITVSATILYLKFDNFC 544
Query: 550 YTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQ 609
YTACPIM GDR CSKKVT+NGDG WRC++CD+SVDECDYRYILQLQIQDHT LT VTAFQ
Sbjct: 545 YTACPIMNGDRPCSKKVTDNGDGTWRCEKCDKSVDECDYRYILQLQIQDHTDLTCVTAFQ 604
Query: 610 EGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVKSTV 669
E GEEIMG+ AK LYY+K E +D+EKF +IIRKV FTK+ KLKVKEETFSDEQRVK+TV
Sbjct: 605 EAGEEIMGISAKDLYYVKNEHKDEEKFEDIIRKVAFTKYNFKLKVKEETFSDEQRVKATV 664
Query: 670 MKAESINFSTESRFLLDLMEKLR---AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNV 729
+K + +N+S ++R +L M+KLR A + NP + + G S R+ ++
Sbjct: 665 VKVDKLNYSADTRTMLGAMDKLRTRDANSLPINPEGSDYNADVVNTGIGSSGTRDPSSVQ 724
Query: 730 GREYGT-PNRGVQYGDHHNSSWPTPSTLHNSRTYCNSCGGSGHSSMNCP 773
R++G ++ Q G+H++ T T CN CG SGH S CP
Sbjct: 725 RRDFGLHAHQSGQSGNHYSGGGAT--------TSCNVCGNSGHVSAKCP 749
BLAST of Carg23566-RA vs. Swiss-Prot
Match:
sp|Q9FHJ6|RFA1C_ARATH (Replication protein A 70 kDa DNA-binding subunit C OS=Arabidopsis thaliana OX=3702 GN=RPA1C PE=3 SV=1)
HSP 1 Score: 774.2 bits (1998), Expect = 1.4e-222
Identity = 432/849 (50.88%), Postives = 541/849 (63.72%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAET-FQPVVQVIDLKLVNT---TQQSGSERYRLLLSDGTHYQQGM 69
LTEG VM + E ++ET PV+QV +LKL+ + Q S RY+ LLSDGT GM
Sbjct: 5 LTEGVVMKMLNGEVTSETDMMPVLQVTELKLIQSKLHQNQESSNRYKFLLSDGTDLAAGM 64
Query: 70 LGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEP-VPATR 129
L T LN LV G +Q GS+++L Y+CN +Q R I+++++L+VI E C+ IG P P
Sbjct: 65 LNTSLNSLVNQGTIQLGSVIRLTHYICNLIQTRRIVVIMQLEVIVEKCNIIGNPKEPGHS 124
Query: 130 SVSAAFSG-NPQSSMGASSGSGILGNVNVS--GASFEQPKVNQSQVPHVGSHFNTPNSWT 189
S++ G N QS+ G+ +VN G S
Sbjct: 125 SINPQRGGVNTQSNGGSEQQQARRSDVNGGRYGVSXXXXXXXXXXXXXXXXXXXXXXXXX 184
Query: 190 RFNGSSPVTGSYGDQKMAYHNNG------------------------------------- 249
Sbjct: 185 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 250 -----------SDIPRPPLNAYAYAPPQPIHQQP--PSMYSNRGGPVAKNEAPPRIMPIT 309
D PR P AY+ P QP P MY NR GPVA+NEAPPRI PI
Sbjct: 245 XXXXXXXXXXRQDQPRAPTATTAYSRPVQSAYQPQQPPMYVNR-GPVARNEAPPRINPIA 304
Query: 310 ALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVADQFYN 369
ALNPYQGRWTIK RVTSK +LR +NNPRG+GK+FSFDLLDA GGEIR TCFN DQF++
Sbjct: 305 ALNPYQGRWTIKVRVTSKADLRRFNNPRGEGKLFSFDLLDADGGEIRVTCFNDAVDQFFD 364
Query: 370 QIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFHFHHIS 429
+I G VY IS+G+LKPAQKN+NHL ND+EI L++ STIQ C EDD +IP FHF +I
Sbjct: 365 KIVVGNVYLISRGNLKPAQKNFNHLPNDYEIHLDSASTIQPC-EDDGTIPRYHFHFRNIG 424
Query: 430 EIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWGNFCQA 489
+IE M +NS DVIG+VSSI+P ++MRKN TE QKRSLQLKDMSGRSVE+T+WGNFC A
Sbjct: 425 DIENMENNSTTDVIGIVSSISPTVAIMRKNLTEVQKRSLQLKDMSGRSVEVTMWGNFCNA 484
Query: 490 EGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGWFEKEG 549
EGQKLQN+CDSG+FPVLA+K+GR+ +FNGK V TI SQ F+EPDFPEAR LR W+E+EG
Sbjct: 485 EGQKLQNLCDSGVFPVLALKAGRIGEFNGKQVSTIGASQFFIEPDFPEARELRQWYEREG 544
Query: 550 RSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVDNFCYTAC 609
R+ SISRE + +GR +VRK I+QIKDE+LGTSEKPDWITV AT+SF+KV+NFCYTAC
Sbjct: 545 RNAHFTSISREFSGVGRQEVRKVIAQIKDEKLGTSEKPDWITVCATISFMKVENFCYTAC 604
Query: 610 PIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVTAFQEGGE 669
PIM GDR CSKKVTNNGDG WRC++CD+ VDECDYRYILQ+Q+QDHT LTW TAFQE GE
Sbjct: 605 PIMNGDRPCSKKVTNNGDGTWRCEKCDKCVDECDYRYILQIQLQDHTDLTWATAFQEAGE 664
Query: 670 EIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVKSTVMKAE 729
EIMG+ AK LYY+KYE QD+EKF +IIR V FTK+I KLK+KEET+SDEQRVK+TV+KAE
Sbjct: 665 EIMGMSAKDLYYVKYENQDEEKFEDIIRSVAFTKYIFKLKIKEETYSDEQRVKATVVKAE 724
Query: 730 SINFSTESRFLLDLMEKLRAGNTIQNP-----GVFRPGLENIGGGQFVSPIRNSTN-NVG 787
+N+S+ +RF+L+ ++KL+ G+ P +R N G G S R++ + +
Sbjct: 725 KLNYSSNTRFMLEAIDKLKIGDANSLPIKAESSNYRSDAFNSGVG--TSGTRDTASVDAR 784
BLAST of Carg23566-RA vs. Swiss-Prot
Match:
sp|Q9SKI4|RFA1A_ARATH (Replication protein A 70 kDa DNA-binding subunit A OS=Arabidopsis thaliana OX=3702 GN=RPA1A PE=1 SV=1)
HSP 1 Score: 688.3 bits (1775), Expect = 1.0e-196
Identity = 347/682 (50.88%), Postives = 468/682 (68.62%), Query Frame = 0
Query: 7 PFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTHYQQGML 66
P LT A+ I +P++QV+++K++ +Q+ ERYR L+SDG Q M+
Sbjct: 2 PVSLTPNAITAI---HDGDVNLKPLLQVLEIKMIGRSQERSQERYRFLISDGVSAQHAMV 61
Query: 67 GTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPATRSV 126
QLN VKSG+ +KGSIVQL Y+C+ V+ R +I+V+ ++ I + + IG P
Sbjct: 62 AVQLNDRVKSGQFEKGSIVQLIDYICSDVKGRKLIVVLNMETIVQQSETIGNP------- 121
Query: 127 SAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSWTRFNGS 186
F + SG+G + N F +P V S N +
Sbjct: 122 -TIFGETDTEAQKTFSGTGNIPPPN--RVVFNEPMVQHS-----------------VNRA 181
Query: 187 SPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAKNEAPPR 246
P G +I N ++ P+ Y N GP+ KNEAP R
Sbjct: 182 PP--------------RGVNIQNQANNTPSFXXXXXXXXXXPASYRNH-GPIMKNEAPAR 241
Query: 247 IMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCFNTVA 306
++PI ALNPYQGRW IKARVT+KG++R YNN +GDGKVFSFDLLD GGEIR TCFN +
Sbjct: 242 VIPIAALNPYQGRWAIKARVTAKGDIRRYNNAKGDGKVFSFDLLDYDGGEIRVTCFNALV 301
Query: 307 DQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPHQQFH 366
D+FY+ E GKVY ISKGSLKPAQKN+NHL N++EIFLE+TST++ C ++D SIP QQF
Sbjct: 302 DRFYDVTEVGKVYLISKGSLKPAQKNFNHLKNEWEIFLESTSTVELCPDEDGSIPKQQFS 361
Query: 367 FHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVELTLWG 426
F IS+IE +N+++DVIGVV+S+NP+ ++RKNG ET +R L LKD SG++VE+TLWG
Sbjct: 362 FRPISDIENAENNTILDVIGVVTSVNPSVPILRKNGMETHRRILNLKDESGKAVEVTLWG 421
Query: 427 NFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEARTLRGW 486
FC +G++L+ M DS PVLA+K+G+VSDF+GK+VGTIS++QLF+ PDFPEA LR W
Sbjct: 422 EFCNRDGRQLEEMVDSAFHPVLAIKAGKVSDFSGKSVGTISSTQLFINPDFPEAHKLRTW 481
Query: 487 FEKEGRSTPSVSISREVATMG--RTDVRKTISQIKDERLGTSEKPDWITVSATVSFVKVD 546
F+ G+ T S SISR+ G R ++RK +SQIK+E LG S+KPDWITV AT+SF+K D
Sbjct: 482 FDYGGKDTASFSISRDTMPGGVSRNEIRKNVSQIKEEGLGRSDKPDWITVKATISFIKTD 541
Query: 547 NFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLTWVT 606
+FCYTACP+MIGD+QC+KKVT +G +W CDRC+Q DECDYRY+LQ+QIQDHTGLTW+T
Sbjct: 542 SFCYTACPLMIGDKQCNKKVTRSGTNRWLCDRCNQESDECDYRYLLQVQIQDHTGLTWIT 601
Query: 607 AFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQRVK 666
AFQE GEEIMG PAK+LY +KYE + +E+FAEI+R LF ++++KLK+KEE++ DEQRVK
Sbjct: 602 AFQETGEEIMGCPAKKLYAMKYELEKEEEFAEIVRDRLFHQYMLKLKIKEESYGDEQRVK 638
Query: 667 STVMKAESINFSTESRFLLDLM 687
TV+K + +N+++ES+++LDL+
Sbjct: 662 MTVVKVDKVNYTSESKYMLDLL 638
BLAST of Carg23566-RA vs. Swiss-Prot
Match:
sp|Q65XV7|RFA1C_ORYSJ (Replication protein A 70 kDa DNA-binding subunit C OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1C PE=1 SV=1)
HSP 1 Score: 655.2 bits (1689), Expect = 9.6e-187
Identity = 376/884 (42.53%), Postives = 517/884 (58.48%), Query Frame = 0
Query: 9 KLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQ----QSGSERYRLLLSDGTHYQQG 68
+LT GAV I + T QPV+QV+D++ V T +ER+R++LSDG + QQ
Sbjct: 4 QLTPGAVQAIAEHPDGTGTIQPVLQVVDVRPVTTKNAPPTPKPAERFRMMLSDGVNTQQS 63
Query: 69 MLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVP-AT 128
ML T LN LVK L+ G++VQL ++CN +Q + IIIV++LDV++ C IG P
Sbjct: 64 MLATALNPLVKDATLRPGTVVQLTDFMCNTIQGKRIIIVVKLDVLQNDCIVIGNPKHYEP 123
Query: 129 RSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFN-------- 188
+S++ N Q+S+ ++ G ++ G S P+ Q+
Sbjct: 124 KSLTKEQDPNLQASVAQTNNGTYSGGASMLGPSV-APRAEQAXXXXXXXXXXXXXXXXXX 183
Query: 189 -----------------------TPNSWTRFNGSSPV----------------------- 248
+ + T N P
Sbjct: 184 XXXXXXXXXXXXXXXXXXXXXXISAQNTTNANMMQPTXXXXXXXXXXXXXXXXXXXXXXX 243
Query: 249 ----------TGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVA 308
+ A +G + PP NAY P +P +QQPP +Y NR GP +
Sbjct: 244 XXXXXXXXXXXXXXXXXRFAAPASGG-VFGPPGNAYG-QPSRPSYQQPPPVYMNR-GPAS 303
Query: 309 KNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRA 368
+N++ RI+PITALNPYQ +WTIKARVT+K ++RH++N R G VFSFDLLDA GGEIRA
Sbjct: 304 RNDSATRIIPITALNPYQPKWTIKARVTAKSDIRHWSNARSSGTVFSFDLLDAQGGEIRA 363
Query: 369 TCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLE-NTSTIQACFEDDQ 428
C+ AD+F+ QIE G+VY IS+GSLKPAQK YN LN+D+EI L+ ST++ C +DD
Sbjct: 364 QCWKESADKFFGQIEVGRVYLISRGSLKPAQKKYNTLNHDYEITLDIGLSTVEVCSDDDN 423
Query: 429 SIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGR 488
SIP Q++F ISE+E M + ++VD++GVV+S++P+ ++MRK GTET+KRS+QLKD+SGR
Sbjct: 424 SIPRLQYNFRQISELENMANETIVDLLGVVTSVSPSATIMRKIGTETRKRSIQLKDLSGR 483
Query: 489 SVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFP 548
S+E+TLWGNFC AEGQ+LQ CDSG P++A K RV DFNGK+V TI ++QL + PDFP
Sbjct: 484 SIEVTLWGNFCDAEGQQLQLQCDSGSNPIIAFKGARVGDFNGKSVSTIGSTQLIINPDFP 543
Query: 549 EARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATV 608
E LR W+ EG++ P +S+SRE+ MGRTD RKTI+QIKDE LG EKPDWITV A +
Sbjct: 544 EVERLRQWYMTEGKTAPCISLSREMLNMGRTDARKTIAQIKDENLGRLEKPDWITVKAAI 603
Query: 609 SFVKVDNFCYTACPIMIG-DRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDH 668
S V ++FCY ACP ++ RQC+KK NNGDG W CDRCD+S +YRY+L+ QIQDH
Sbjct: 604 SHVTTESFCYPACPKLLPVGRQCNKKAINNGDGMWHCDRCDESFQNPEYRYMLRFQIQDH 663
Query: 669 TGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETF 728
TG T+ +AF E GE+I G A L+ ++ +QDD +FAEII V + ++ KLKVKEET+
Sbjct: 664 TGSTYASAFDEAGEQIFGRKAGELFSIRNVDQDDAQFAEIIEGVRWHLYLFKLKVKEETY 723
Query: 729 SDEQRVKSTVMKAESINFSTESRFLLDLMEKLRAGNTIQNPGVFRPGLENIGGGQFVSPI 788
+DEQ +K T +K E ++ S ES LL ++ L Q+ G + GG
Sbjct: 724 NDEQSLKCTAVKVEKLDPSKESNVLLGAIDNLLLDPKGQSDLAPNAGFTDPVGGHGAPTS 783
Query: 789 RNSTNNVGREYGTPNRGV-QYGDHHNSS--WPTPSTLHNSRTYCNSCGGSGHSSMNC-PS 818
N+ Y GV Q+G + S TP + C+ CG +GHS+ C
Sbjct: 784 SNA-------YAMNTGGVNQFGQQASISAGMSTPLAATRNLQTCSICGANGHSAQICHVG 843
BLAST of Carg23566-RA vs. Swiss-Prot
Match:
sp|Q6YZ49|RFA1A_ORYSJ (Replication protein A 70 kDa DNA-binding subunit A OS=Oryza sativa subsp. japonica OX=39947 GN=RPA1A PE=1 SV=1)
HSP 1 Score: 620.2 bits (1598), Expect = 3.4e-176
Identity = 323/690 (46.81%), Postives = 455/690 (65.94%), Query Frame = 0
Query: 5 MAPFKLTEGAVMVICKRESSAETFQPVVQVIDLK--LVNTTQQSGSERYRLLLSDGTHYQ 64
MA +LT V +++ +PV+Q+++L+ VN + ER+R ++SDGT
Sbjct: 1 MAMARLTPNGVAAALAGDTN---LKPVLQIVELRGVQVNGAGVTRGERFRAVVSDGTAAS 60
Query: 65 QGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPA 124
+ QL+ +SG L++GSIVQL +YV N V R II+++ L+V+ C+ IG P
Sbjct: 61 SALFAAQLSDHARSGALRRGSIVQLSEYVINEVGPRRIIVILNLEVLVSECEIIGNPTAL 120
Query: 125 TRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNSWTR 184
+ + S + + G++ N+ N+ T+
Sbjct: 121 SETGSPIPNPTRVEQFNGAPQYGLMAG-------------------------NSSNTTTK 180
Query: 185 FNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPPQPIHQQPPSMYSNRGGPVAKNE 244
+ + P+ QP ++ P+ Y N G + KNE
Sbjct: 181 PSDNVPLF----QXXXXXXXXXXXXXXXXXXXXXXXXXQPSYRPAPN-YKNHGA-IMKNE 240
Query: 245 APPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATCF 304
AP RI+PI+ALNPYQGRW IKARVT+KG++R Y+N +GDGKVFSFDLLD+ GGEIR TCF
Sbjct: 241 APARIIPISALNPYQGRWAIKARVTAKGDIRRYHNAKGDGKVFSFDLLDSDGGEIRVTCF 300
Query: 305 NTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIPH 364
N + D+FY +E GKVY +S+G+L+PAQKNYNHLNN++EI LEN ST+ C +++ SIP
Sbjct: 301 NALLDRFYEVVEVGKVYVVSRGNLRPAQKNYNHLNNEWEILLENGSTVDLCPDENSSIPT 360
Query: 365 QQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVEL 424
Q+F F I+EIE +N+++D+IGVV+S+NP T++ RKNG ETQKR++ LKDMSGRSVE+
Sbjct: 361 QRFDFRPINEIEDAQNNAILDIIGVVTSVNPCTTIQRKNGMETQKRTMNLKDMSGRSVEV 420
Query: 425 TLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEART 484
T+WG+FC EG +LQ M + G+FPVLAVK+G+VSDF+GK+VGTIS++QLF+ PD EA +
Sbjct: 421 TMWGDFCNREGSQLQGMVERGIFPVLAVKAGKVSDFSGKSVGTISSTQLFINPDSAEAHS 480
Query: 485 LRGWFEKEGRSTPSVSISREVAT-MGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFV 544
LR WF+ GR + SISR++ R ++RKT++QIKDE LG +KPDWITV ATV F
Sbjct: 481 LRQWFDSGGRDASTQSISRDITPGASRNEIRKTVAQIKDEGLGMGDKPDWITVKATVIFF 540
Query: 545 KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLT 604
K ++F YTACP MIGDRQC+KKVT + +G W CD+CD+ +ECDYRY+LQ QIQDH+G
Sbjct: 541 KNESFFYTACPNMIGDRQCNKKVTKSTNGNWTCDKCDREFEECDYRYLLQFQIQDHSGTA 600
Query: 605 WVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQ 664
WVTAFQE G+E++G A L LK E++D +FA+ + LF +++++LKVKEE++ DE+
Sbjct: 601 WVTAFQEAGQELLGCSATELNALK--EREDPRFADTMLNCLFQEYLLRLKVKEESYGDER 654
Query: 665 RVKSTVMKAESINFSTESRFLLDLMEKLRA 692
+VK+T +K E ++ S ES+FLLDL+ K A
Sbjct: 661 KVKNTAVKVEKVDPSGESKFLLDLISKSSA 654
BLAST of Carg23566-RA vs. TrEMBL
Match:
tr|A0A1S3BKX8|A0A1S3BKX8_CUCME (Replication protein A subunit OS=Cucumis melo OX=3656 GN=LOC103490723 PE=3 SV=1)
HSP 1 Score: 1413.7 bits (3658), Expect = 0.0e+00
Identity = 720/863 (83.43%), Postives = 769/863 (89.11%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
M ASMA KLTEGAVMVICKRESSAETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
+QQGMLGTQLN LVKSGKLQKGSIV+LRQYVCNPVQERLIIIVIELDVI+E+CD IGEPV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEVCDIIGEPV 120
Query: 121 PATRSVSAAFSGNPQSS---MGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTP 180
ATRS ++AFSGNP SS +GAS GSG++G NVSGASFEQPK NQS VPH+GS+ N P
Sbjct: 121 SATRSSASAFSGNPLSSVGGLGASPGSGMIGKGNVSGASFEQPKGNQSHVPHMGSYSNPP 180
Query: 181 NS-----------------WTRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPP 240
+ +RFNGSSP+TGSYGDQKMAYHN+GSD+PRPPLN+ AYA P
Sbjct: 181 ETGRFSASIAPPPYSKTEPGSRFNGSSPLTGSYGDQKMAYHNSGSDMPRPPLNSNAYARP 240
Query: 241 QPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
QP++QQPPSMYSNR GP+AKNEA PRIMPI+ALNPYQGRWTIKARVT KGELRHYNNPRG
Sbjct: 241 QPMYQQPPSMYSNR-GPIAKNEAAPRIMPISALNPYQGRWTIKARVTLKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDF 360
DGKVFSFDLLDA GEIR TCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHL ND+
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLKNDY 360
Query: 361 EIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQ CFEDDQSIP QQFHFH I EIEGM SNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQ+LQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKD 540
KAVGTISTSQLF+EPDFPEA +LR WFE+EGRST SVSISREVA +GRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVANVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSF+KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEKL----------R 720
VLFTKFIMKLK+KEETFSDEQRV+STV+KAESI+FS+ESRFLL+LMEKL +
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESIDFSSESRFLLNLMEKLKPENSSSTTPK 720
Query: 721 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNVGREYGTPNRGVQYGDHHNSSWPTPST 780
A +TI N G ENIGGGQFVSPIRNST N REYGTPN+GVQYG+ ++SS P+PST
Sbjct: 721 AESTIHNLGFRDTASENIGGGQFVSPIRNST-NFSREYGTPNQGVQYGNQYSSSRPSPST 780
Query: 781 LHNSRTYCNSCGGSGHSSMNCPSIISSPAPSVGGGMYLNRVSGSSGHDSGECFKCHQTGH 834
NS TYCNSCGGSGHSSMNCPSI+S PA SVGGGMY N+ SG S SGECFKCHQTGH
Sbjct: 781 PLNSNTYCNSCGGSGHSSMNCPSIMSGPALSVGGGMYSNQASGPSAGTSGECFKCHQTGH 840
BLAST of Carg23566-RA vs. TrEMBL
Match:
tr|A0A0A0L503|A0A0A0L503_CUCSA (Replication protein A subunit OS=Cucumis sativus OX=3659 GN=Csa_3G005560 PE=3 SV=1)
HSP 1 Score: 1412.9 bits (3656), Expect = 0.0e+00
Identity = 721/863 (83.55%), Postives = 768/863 (88.99%), Query Frame = 0
Query: 1 MVASMAPFKLTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGSERYRLLLSDGTH 60
M ASMA KLTEGAVMVICKRESSAETFQP++QVIDLKLVNT+QQSGSER+RLL+SDGTH
Sbjct: 1 MAASMASSKLTEGAVMVICKRESSAETFQPILQVIDLKLVNTSQQSGSERFRLLVSDGTH 60
Query: 61 YQQGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPV 120
+QQGMLGTQLN LVKSGKLQKGSIV+LRQYVCNPVQERLIIIVIELDVI+EMCD IGEPV
Sbjct: 61 FQQGMLGTQLNELVKSGKLQKGSIVRLRQYVCNPVQERLIIIVIELDVIEEMCDIIGEPV 120
Query: 121 PATRSVSAAFSGNPQSS---MGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTP 180
ATRS + A SGNP S +GAS GSG++G NVS ASFEQPKVNQS VPH+GS+ N P
Sbjct: 121 SATRSSANALSGNPLPSVGGLGASPGSGMIGKGNVSSASFEQPKVNQSHVPHMGSYSNPP 180
Query: 181 -----------------NSWTRFNGSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAPP 240
+S +RFNG SP+TGSYGDQKMAYHN+GSDIPRPPLN+ AYA P
Sbjct: 181 ETGRFSASIAPPSYSKTDSGSRFNGPSPLTGSYGDQKMAYHNSGSDIPRPPLNSNAYARP 240
Query: 241 QPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRG 300
QPI+QQPPSMYSNR GP+AKNEA PRIMPI+ALNPYQGRWTIKARVTSKGELRHYNNPRG
Sbjct: 241 QPIYQQPPSMYSNR-GPIAKNEAAPRIMPISALNPYQGRWTIKARVTSKGELRHYNNPRG 300
Query: 301 DGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDF 360
DGKVFSFDLLDA GEIR TCFNTVADQFYNQIESGKVYFISKGSLKPAQKN+NHL ND+
Sbjct: 301 DGKVFSFDLLDAYRGEIRVTCFNTVADQFYNQIESGKVYFISKGSLKPAQKNFNHLKNDY 360
Query: 361 EIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRK 420
EIFLENTSTIQ CFEDDQSIP QQFHFH I EIEGM SNSVVDVIGVVSSINPATSLMRK
Sbjct: 361 EIFLENTSTIQPCFEDDQSIPQQQFHFHQIGEIEGMDSNSVVDVIGVVSSINPATSLMRK 420
Query: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNG 480
NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQ+LQNMCDSGLFPVLAVKS RVSDFNG
Sbjct: 421 NGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQRLQNMCDSGLFPVLAVKSSRVSDFNG 480
Query: 481 KAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKD 540
KAVGTISTSQLF+EPDFPEA +LR WFE+EGRST SVSISREVA++GRTDVRKTISQIKD
Sbjct: 481 KAVGTISTSQLFIEPDFPEAHSLREWFEREGRSTLSVSISREVASVGRTDVRKTISQIKD 540
Query: 541 ERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
ERLGTSEKPDWITVSATVSF+KVD+FCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS
Sbjct: 541 ERLGTSEKPDWITVSATVSFIKVDSFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQS 600
Query: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRK 660
VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMG+PAKRLYYLKYEEQDDEKFAEIIRK
Sbjct: 601 VDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGIPAKRLYYLKYEEQDDEKFAEIIRK 660
Query: 661 VLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEKL----------R 720
VLFTKFIMKLK+KEETFSDEQRV+STV+KAESINFS+ESRFLL+LMEKL +
Sbjct: 661 VLFTKFIMKLKIKEETFSDEQRVRSTVVKAESINFSSESRFLLNLMEKLKPENSSSATPK 720
Query: 721 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTNNVGREYGTPNRGVQYGDHHNSSWPTPST 780
A +TI N G ENIGGGQFVSPIRNST N REYGTPN+GVQYG+ ++SS P+PST
Sbjct: 721 AESTIHNFGFRDTASENIGGGQFVSPIRNST-NFSREYGTPNQGVQYGNQYSSSRPSPST 780
Query: 781 LHNSRTYCNSCGGSGHSSMNCPSIISSPAPSVGGGMYLNRVSGSSGHDSGECFKCHQTGH 834
NS TYCNSCGGSGHSS NCPSI+S PA SVGGGMY N+ SG SG SGECFKCHQTGH
Sbjct: 781 PLNSNTYCNSCGGSGHSSTNCPSIMSGPALSVGGGMYSNQASGPSGGTSGECFKCHQTGH 840
BLAST of Carg23566-RA vs. TrEMBL
Match:
tr|F6I092|F6I092_VITVI (Replication protein A subunit OS=Vitis vinifera OX=29760 GN=VIT_02s0033g01170 PE=3 SV=1)
HSP 1 Score: 1025.0 bits (2649), Expect = 9.4e-296
Identity = 539/825 (65.33%), Postives = 630/825 (76.36%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGS-ERYRLLLSDGTHYQQGMLGT 69
LTEGA+ ++C ++ +PV+QV D++LVNT QQS S ER+R+LLSDG H QQGML T
Sbjct: 5 LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64
Query: 70 QLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGE---------- 129
Q N LVKSG+LQKGS+VQL Q+VCN +++R+III+I+LDVI E CD IGE
Sbjct: 65 QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124
Query: 130 -----------PVPATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQV 189
P+P++ GNPQS +S G N++G + + S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANSFSSN 184
Query: 190 PHVG--SHFNTPNSWTRFN------GSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAP 249
P G + N P +++ S+ TGSYGDQ + NN ++ R P NA A
Sbjct: 185 PDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA-RQ 244
Query: 250 PQPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPR 309
PQ +QQPP MY+NR GPVA+NEA RI+PI ALNPYQGRWTIKARVT+KGELRHYNNPR
Sbjct: 245 PQSAYQQPPPMYTNR-GPVARNEAAARIIPIAALNPYQGRWTIKARVTAKGELRHYNNPR 304
Query: 310 GDGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNND 369
GDGKVFSFDLLD+ GGEIR TCFN VADQFYNQIE+GKVY ISKGSLKPAQK +NHL ND
Sbjct: 305 GDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRND 364
Query: 370 FEIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMR 429
EIFLE+TSTIQ CF+DD SIP QQFHF IS++E M +NSVVDVIGVVS I+P+ S+MR
Sbjct: 365 HEIFLESTSTIQPCFDDDNSIPRQQFHFRSISDVESMENNSVVDVIGVVSFISPSASIMR 424
Query: 430 KNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFN 489
KNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQ+LQNMCDSG+FPVLAVKS RV+DFN
Sbjct: 425 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDFN 484
Query: 490 GKAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIK 549
GKAVGTISTSQLF+EPDFPEAR L+ WF+KEGR+TPSVSISREV +MGRTDVRKTISQIK
Sbjct: 485 GKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTSMGRTDVRKTISQIK 544
Query: 550 DERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQ 609
DERLGTSEKPDWITV ATVSF+KVDNFCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCDQ
Sbjct: 545 DERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCDQ 604
Query: 610 SVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIR 669
SVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMG+ AK LYYLKYEEQDDEKF EI+R
Sbjct: 605 SVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEILR 664
Query: 670 KVLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEK---------LR 729
VLFTK+ KLKVKEE FSDEQRVKSTV+KAE +NFS+ESRFLLD++EK L+
Sbjct: 665 GVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLK 724
Query: 730 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTN--NVGREYGTP-NRGVQYGDHHNSSWPT 789
+ N I N G+ PGL N+G Q + S N N GR++G P N+GVQ+G+ + SS +
Sbjct: 725 SENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSGLS 784
Query: 790 PSTLHNSRTYCNSCGGSGHSSMNCPSIISSPAPSVGGGMYLNRVS 793
+ CNSCGG+GHSS NCPS++ SP S GGG Y++R S
Sbjct: 785 ATGSTGMYQSCNSCGGTGHSSSNCPSVMHSPRQSSGGG-YVSRAS 826
BLAST of Carg23566-RA vs. TrEMBL
Match:
tr|A0A2P5FA65|A0A2P5FA65_9ROSA (Replication protein A subunit OS=Trema orientalis OX=63057 GN=TorRG33x02_094630 PE=3 SV=1)
HSP 1 Score: 1003.8 bits (2594), Expect = 2.2e-289
Identity = 536/900 (59.56%), Postives = 646/900 (71.78%), Query Frame = 0
Query: 10 LTEGAVMVICKRE-SSAETFQPVVQVIDLKLVNTTQQSG------SERYRLLLSDGTHYQ 69
LTEGA+ IC E E ++PVVQ++DL++VN TQ G ER+R+ +SDG H+Q
Sbjct: 5 LTEGAIARICTEEFRKEEGWKPVVQILDLRMVN-TQAGGQPIPPDKERFRVRISDGLHFQ 64
Query: 70 QGMLGTQLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGEPVPA 129
QGMLGTQ+N LV+ G+LQKGS+++L ++VC PVQ RLIII+++L+++ E CD IG+P PA
Sbjct: 65 QGMLGTQVNDLVRQGRLQKGSVIRLNEFVCTPVQGRLIIIIVDLELLLETCDPIGDPTPA 124
Query: 130 TRSVSAAFS---GNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQVPHVGSHFNTPNS 189
+S +A+ GN Q G+ +G + N + S E P++N+S GS +++ +
Sbjct: 125 IKSANASSGSVIGNTQGVGGSKFSAGAV-NETAAVMSAEHPRMNRS----FGSPYSSNSE 184
Query: 190 WTRFNG----SSPVTGSYGDQKMAYHNNG------------------------------- 249
R+ S V G + +Y N+G
Sbjct: 185 SGRYMATDLPSMNVKPEPGGRSYSYQNSGIGXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 244
Query: 250 --------SDIPRPPLNAYAYAPPQPIHQQPPSMYSNRG---------------GPVAKN 309
+ + PLN+Y GPVAKN
Sbjct: 245 XXXXXXXXXXVSQAPLNSYXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRGPVAKN 304
Query: 310 EAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPRGDGKVFSFDLLDACGGEIRATC 369
EAP RI+PI ALNPYQGRWTIKARVT+KGELRHYNNPRGDGKVFSFDLLD+ GGEIRATC
Sbjct: 305 EAPARIIPIAALNPYQGRWTIKARVTAKGELRHYNNPRGDGKVFSFDLLDSEGGEIRATC 364
Query: 370 FNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNNDFEIFLENTSTIQACFEDDQSIP 429
FN VADQFYNQIE G++Y ISKGSLKPAQK +NHL ND EIFLE+TS IQ CFEDD SIP
Sbjct: 365 FNAVADQFYNQIEVGRIYMISKGSLKPAQKTFNHLRNDQEIFLESTSIIQPCFEDDNSIP 424
Query: 430 HQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMRKNGTETQKRSLQLKDMSGRSVE 489
HQQFHF IS++E M +N+VVD+IGVVSSI+PA S+MRKNGTETQKR+LQLKD S R VE
Sbjct: 425 HQQFHFCLISDVESMENNNVVDLIGVVSSISPAASIMRKNGTETQKRTLQLKDTSSRIVE 484
Query: 490 LTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFNGKAVGTISTSQLFVEPDFPEAR 549
LTLWG+FC AEGQ+LQ MCDSG+FPVLAVKSGR++DFNGKAVGTIS+SQLF++PDFPEA
Sbjct: 485 LTLWGSFCNAEGQRLQTMCDSGVFPVLAVKSGRINDFNGKAVGTISSSQLFIDPDFPEAH 544
Query: 550 TLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIKDERLGTSEKPDWITVSATVSFV 609
L+ WF+KEG+S PSVSISRE +GR D+RKTISQIKDE+LGTSEKPDWITVSATVSF+
Sbjct: 545 RLKEWFDKEGKSAPSVSISRETVGVGRADIRKTISQIKDEKLGTSEKPDWITVSATVSFI 604
Query: 610 KVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQSVDECDYRYILQLQIQDHTGLT 669
KVD+FCYTACP+MIGDRQC+KKVTNNGDGKWRCDRCDQ V+ECDYRYILQLQIQDHTGLT
Sbjct: 605 KVDSFCYTACPVMIGDRQCNKKVTNNGDGKWRCDRCDQCVEECDYRYILQLQIQDHTGLT 664
Query: 670 WVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIRKVLFTKFIMKLKVKEETFSDEQ 729
WVTAFQEGGEEIMG+PAK LYY KYEEQ++EKFAEIIRKVLFTKF+ KLKVKEET+SDEQ
Sbjct: 665 WVTAFQEGGEEIMGIPAKDLYYTKYEEQNEEKFAEIIRKVLFTKFMFKLKVKEETYSDEQ 724
Query: 730 RVKSTVMKAESINFSTESRFLLDLMEKL---------RAGNTIQNPGVFRPGLENIGGGQ 789
RVKSTV+KAE +NFS+ESRFLLDL++KL + N G+ PG+ N Q
Sbjct: 725 RVKSTVVKAEKVNFSSESRFLLDLLDKLKREDFGSAHKVETITSNHGITGPGVMNSANRQ 784
Query: 790 FVSPIRNSTNNVGREYGTP-NRGVQYGDHHNSSWPTPSTLHN-SRTYCNSCGGSGHSSMN 830
++ + GRE+GTP N+ QYG+ + +T + S CNSCG +GHSSMN
Sbjct: 785 STPVDFGNSASAGREFGTPANQVGQYGNQYTGGSRLSATASSGSYMSCNSCGATGHSSMN 844
BLAST of Carg23566-RA vs. TrEMBL
Match:
tr|A5AQN6|A5AQN6_VITVI (Replication protein A subunit OS=Vitis vinifera OX=29760 GN=VITISV_038295 PE=3 SV=1)
HSP 1 Score: 1000.7 bits (2586), Expect = 1.9e-288
Identity = 529/818 (64.67%), Postives = 616/818 (75.31%), Query Frame = 0
Query: 10 LTEGAVMVICKRESSAETFQPVVQVIDLKLVNTTQQSGS-ERYRLLLSDGTHYQQGMLGT 69
LTEGA+ ++C ++ +PV+QV D++LVNT QQS S ER+R+LLSDG H QQGML T
Sbjct: 5 LTEGAISMLCSGDAQGSDVKPVLQVADIRLVNTQQQSNSNERFRILLSDGCHLQQGMLAT 64
Query: 70 QLNGLVKSGKLQKGSIVQLRQYVCNPVQERLIIIVIELDVIKEMCDFIGE---------- 129
Q N LVKSG+LQKGS+VQL Q+VCN +++R+III+I+LDVI E CD IGE
Sbjct: 65 QRNELVKSGRLQKGSVVQLTQFVCNVIKDRMIIIIIDLDVILEKCDPIGEPKQYVQGGTA 124
Query: 130 -----------PVPATRSVSAAFSGNPQSSMGASSGSGILGNVNVSGASFEQPKVNQSQV 189
P+P++ GNPQS +S G N++G + + S
Sbjct: 125 GGVAPIARTSAPMPSSVDHPGTVLGNPQSFGNSSLTGGSAAKPNMAGVASPYHANSFSSN 184
Query: 190 PHVG--SHFNTPNSWTRFN------GSSPVTGSYGDQKMAYHNNGSDIPRPPLNAYAYAP 249
P G + N P +++ S+ TGSYGDQ + NN ++ R P NA A
Sbjct: 185 PDSGRFAGTNAPPMYSKMQPDAGIPASAASTGSYGDQSTGFRNNKVEVSRAPYNAPA-RQ 244
Query: 250 PQPIHQQPPSMYSNRGGPVAKNEAPPRIMPITALNPYQGRWTIKARVTSKGELRHYNNPR 309
PQ +QQPP MY+NR GPVA+NEA RI+PI ALNPYQGRWTIKARVT+KGELRHYNNPR
Sbjct: 245 PQSAYQQPPPMYTNR-GPVARNEAXARIIPIAALNPYQGRWTIKARVTAKGELRHYNNPR 304
Query: 310 GDGKVFSFDLLDACGGEIRATCFNTVADQFYNQIESGKVYFISKGSLKPAQKNYNHLNND 369
GDGKVFSFDLLD+ GGEIR TCFN VADQFYNQIE+GKVY ISKGSLKPAQK +NHL ND
Sbjct: 305 GDGKVFSFDLLDSDGGEIRVTCFNAVADQFYNQIETGKVYLISKGSLKPAQKTFNHLRND 364
Query: 370 FEIFLENTSTIQACFEDDQSIPHQQFHFHHISEIEGMGSNSVVDVIGVVSSINPATSLMR 429
EIFLE+TSTIQ CF+DD SIP QQFHF IS++E M +NSVVDVIGVVS I+P+ S+MR
Sbjct: 365 HEIFLESTSTIQPCFDDDNSIPRQQFHFRXISDVESMENNSVVDVIGVVSFISPSASIMR 424
Query: 430 KNGTETQKRSLQLKDMSGRSVELTLWGNFCQAEGQKLQNMCDSGLFPVLAVKSGRVSDFN 489
KNGTETQKR+L LKDMSGRSVELTLWGNFC AEGQ+LQNMCDSG+FPVLAVKS RV+DFN
Sbjct: 425 KNGTETQKRALHLKDMSGRSVELTLWGNFCNAEGQRLQNMCDSGVFPVLAVKSARVNDFN 484
Query: 490 GKAVGTISTSQLFVEPDFPEARTLRGWFEKEGRSTPSVSISREVATMGRTDVRKTISQIK 549
GKAVGTISTSQLF+EPDFPEAR L+ WF+KEGR+TPSVSISREV MGRTDVRKTISQIK
Sbjct: 485 GKAVGTISTSQLFIEPDFPEARKLKEWFDKEGRNTPSVSISREVTXMGRTDVRKTISQIK 544
Query: 550 DERLGTSEKPDWITVSATVSFVKVDNFCYTACPIMIGDRQCSKKVTNNGDGKWRCDRCDQ 609
DERLGTSEKPDWITV ATVSF+KVDNFCYTACPIMIGDRQC+KKVTNNGDGKWRC+RCDQ
Sbjct: 545 DERLGTSEKPDWITVCATVSFIKVDNFCYTACPIMIGDRQCNKKVTNNGDGKWRCERCDQ 604
Query: 610 SVDECDYRYILQLQIQDHTGLTWVTAFQEGGEEIMGLPAKRLYYLKYEEQDDEKFAEIIR 669
SVD+CDYRYILQ QIQDHTGLTWVTAFQE GEEIMG+ AK LYYLKYEEQDDEKF EI+R
Sbjct: 605 SVDDCDYRYILQFQIQDHTGLTWVTAFQECGEEIMGISAKNLYYLKYEEQDDEKFGEILR 664
Query: 670 KVLFTKFIMKLKVKEETFSDEQRVKSTVMKAESINFSTESRFLLDLMEK---------LR 729
VLFTK+ KLKVKEE FSDEQRVKSTV+KAE +NFS+ESRFLLD++EK L+
Sbjct: 665 GVLFTKYSFKLKVKEEIFSDEQRVKSTVVKAEKVNFSSESRFLLDMVEKHKVEDSTFPLK 724
Query: 730 AGNTIQNPGVFRPGLENIGGGQFVSPIRNSTN--NVGREYGTP-NRGVQYGDHHNSSWPT 786
+ N I N G+ PGL N+G Q + S N N GR++G P N+GVQ+G+ + SS +
Sbjct: 725 SENVISNGGMTNPGLGNVGIRQSTPSVNYSGNASNAGRDFGFPANQGVQHGNQYGSSGLS 784
The following BLAST results are available for this feature:
Match Name | E-value | Identity | Description | |
XP_022923334.1 | 0.0e+00 | 99.88 | replication protein A 70 kDa DNA-binding subunit A-like [Cucurbita moschata] | [more] |
XP_023553094.1 | 0.0e+00 | 97.48 | replication protein A 70 kDa DNA-binding subunit A-like [Cucurbita pepo subsp. p... | [more] |
XP_022965290.1 | 0.0e+00 | 96.04 | LOW QUALITY PROTEIN: replication protein A 70 kDa DNA-binding subunit A-like [Cu... | [more] |
XP_008448593.1 | 0.0e+00 | 83.43 | PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis melo] | [more] |
XP_004146122.1 | 0.0e+00 | 83.55 | PREDICTED: replication protein A 70 kDa DNA-binding subunit A [Cucumis sativus] ... | [more] |