Carg24204 (gene) Silver-seed gourd
The following sequences are available for this feature:
Legend: polypeptideCDSexon Hold the cursor over a type above to highlight its positions in the sequence below.ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGGTGAGCCCCATGTTCTTGACCAAAGGCAAGATTCAAGAACATGATGCATATTGTTTGACCACTCATTGGAATTCTTTTGTCGCCAAAAATTGCTTGAAAATTGGCCATCTTATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGAAAACGAAATATTCACCTCTGATCTTTACTTCGCATTGAATACCATGGATGGTCGATGTTTTCTTTAGATGCGTTCTTGAGTAAATAATGGATAGGATAGGCAGCTTTCTTTAGAAGTTTTTCCATTCGTATATGTTTTCTTTTGATGCGATGCGTTCTTGCGTAGACTCCGCAGATTATTTTTAGAGTTTTTTTTTTTTTCCTATGTTCCAGTTCAAGAAATTATCCATTCTTAAATAAATGTCAGGATTAGTAGTTTAATAATTTTTACGTCTTGGATCTTGTTTATTGATTATATGTTTTCGATATTTTTAAGGGGCCTCGAGTAAACTTTTGATTACTCTGTCTCAATTATTTATATTTGTAGCGATTTAAGTCCAAGATCTAAGATCTGATGATCCTGACACTCCCTTATATCCCGTTCTAAGAGTGACGACTAGCAATGATGCTGATTATCTTGGGTAGCCCATTCTTAAAAATGGCTAGAACATTAATGGATGTCCACAGGATAATGATAATATTTAGAATGGTGTTCAACAAATAAAATTCAATATCAATGGCTATTTGAAATATTTAGTAATCTCTCGATTGATTTGAAACCAAGTAGAACAGAAGACGAGCAATGGCCCATGATGCAAACTTAACCAACTACTGAGCCTGCAATTTCATCCGAGCATATCTATCATATGAACCATAAAAGTTTATTCGTGATGCAAAAAGATATTTAGGGGATGAAACGATACAAATGAAAATTAAAAGGAATGAGTCGGGTATCATATTTTCGAGAAAAAGGAATGCTTCATCTTCCACTCTATATCACTTTTTTCTTTAAAACAATATATCAACATACTATGCTATCATAAGATACTTAACCTTTAAATAATATATTAACATCGGACCATTGAAGACAATGCCAACTTTAAGGTCACCATAAATGGGACAATAGACTTGACTCCACACCTCAAAACAATGTTAGACAAGTCTTTATATAAACATAGTAATACTAATTCTCGTACATGAATCAAATAAACGAGAACACTAATCAAAATGGCCTTTATACACACATAAAATTACTAATTCTCATACTTTAATCAAATAAACTAAAATACTAATCAAAATGGTTACAAACTGAAGGGAGGTTAAGAATGAATATTAATCAAAATAGTTATGTTGAGGCCATTGGGTGCTGAATCTAGATTTCAAATATGGGCATAAAATGTTACAAATAGTATCAAAGCGAAAACTCTTTCAAAAGGATGCAGTTCAAAGATGAACCAAGGTAAAAGTCAATAGTCATGTGATGCTCGTGCACAAGAAGAGTATATGTATAAACTGAGGCTATATCAAAATGATAGTGAAGTTAAGAAGGGAAAAAAAATTGATATGTATTGCCCATGCAAATAAGTTGCACATTAGTCCTATTCAGAAAGGGTAAAAAAATTTGATATGTATTGCCCATGCAAATAAGTTGCACATTCTTCCTAAAAATAATATCATGTTAAAGAGGATGCATTAGAGAGAGAAACATTAGGCAAGAGAAAAAGTTTGAGAAAGAGAGGAAATATAACTAACTCATGCCACTGTTAATAGGTATTGTCTTTTTTGGGCTTTTCTTTTCGGGATTTCCCTCAAAGCTTGCCCACCGCTAGCAGATATTGTCCTCTTCGGGTTTTCCCCTTCGGGATTTCCCTCAAGGCTTGCCCACCCCTAGTAGATATTGTCCTCTTTGGGTTTCCCTTTCGGGATTCCCCTCAAGACTTGCCCATCGCTAACAGATATTGTTCTCTTTGGGCTTTCCCCTTCGGGATTCCCCTCAAGACTTTAAAAGTCGTCTACTACTAGGGGAAGGTTTCCACACCTTATAAATGGTGTTTTGTTCTTCTCCCCAGCCAATGTGAAACATCACAATCCACCCTCCTTCGGGGTAAATGGTGTTTTGTTCTCCTCTCCAACCAATGTGAAACATCAGAATCCACCCTCCTTCGGGGCCAGCATCCTCACTGACACTTATTCCTTTCTCCAATCGAGGTGGGACCGCCACCAACACAATCCACCCTCCTTCGGGGTAAATGGTGTTTTGTTCTCCTCTCCAACCAATGTGAAACATCACAATCCACCCTCCTTCGGGGCCAGCATCCTCGCTGACGCTTATTCCTTTCTCCAATCGAGGTGGGACCGCCACCAAATCTACCCCCTTTGGGGCCCAACGTTCTTACATCACAATCCGCCTCGTGTCTACCCCCCTTCGGGGAACAACGAAAAGGCTGACACTTCGTCCAGTGTCTAACTCTGATACCATTTGTAACAACCTAGGCCCACTGCTAGCCGATGTCGTCCTCTTTGGGCTTCCCCTCAAGGCTTTAAAACGTGTCTACTAGTGGAAGGTTTCCACACCCTTGTAAAGGGTGTTTTGTTCTCCTTCCCCAACCAATGTGGGACATCACAGAAAATAAAATTTTAGGGAGAAAAAAATCATTTGTAGCAAACCGAGTTATTCCACTCTTATTAATTAGGGTCGTGATTTAAAACCAATAGTATCAGTTCTGGAATGGAAATTATAAACAAATCACTTACATGCCACTGCACTCCTCTATCAGGGTTAGATATACACACGATTTCATACTTCCTAATGGATCACCCTAGGGCACATGAATTCTCTTTGTAAAGAAGAAAAAAGATGGATCGTTGCACCTATGTATTGACTTTCAAGAATTGGACAAGATATCAATAAAAAATGAGGACTACTTTTACATATATTGACTTATTCGACCTGTTTCAAGGAGCGTCAATATTTCCAATACTGAATTTAGGAATGGTCCCACAACCGTTGAGAACAAGAGACAATGATACAAACATGAGTTTAGGCGGTGTCACATGAGTTGACAACTTATAATCTACGTACATGCTTGAGACTTCAACACTTACCTTATTACAAGCTCGAAGGCAATGACGTGTGGCAATGGTCTAGAGAGAAGGCCACGATGAGGGGACAAGAGTGTTGTGCAGCGATGGCAAGAGGTGAGAGTAGAGTGTTATGTGGCAACGACTAGAGGGCGAGAGTACTACACTAGAATAGGGGCGATAAAGGGCAAGACTCGAGACGAGAGTACTACGGGTTGCGGCTGCACTTTAGGGTTAGATTTCTAAATTTATTTTGAATATATATTACAAAAACAACAGGTTTGGGTCGGGTCAACTCGAAAACTTTTCCCCTCAACCCCCAACCCAAAACAAATAAAATCAGATAAAGAAACACCCAACCCAACTCTTATAATTCAGGTTAGCGATGCTAGATTTTCGAGTTAGATGTACAACCCTATTGAGAATGTGCCTATAGTTTTCATGGATTTGATGAACAAAGTGTTTAAGGGACATGTGGGCTAGTTAGAAAGGGATATATTGTGTCCTAAGCATCATTGATTATGATTCTCGCTATTTGAAAGTATAGCAGTCCAAGTCCACCACGAGTAGATATTGTTTTTTTTTTTTTTTTGAGGTTTCCCTTTTAATTTTTTCCTTCAAGGTTTTAAAACGTTGTCTATAGGGAGAGATTTCCACACCCTTTTAAAGAATGCTTCGTTTTCCTCTTCAACCGATGTGGGATTTCACAATCCACCCCCCTTCGGAGCCCAACGTCGTCACCGACACTCATTCCCTTCTCCAATCAATATTAGATCCCCCAATCCACCCCCTTTGAGTTCCAGTGTCCTTACTAGTACACCGCCTAGTGTCTGACTCTAATACCATTTGTAACAACCGAAGCCGATTGCTAACAGATAGCAGTGGGCTTAGGCTGTTACAAAAAGATCATGAGTAGAACTACTCAATTCATAATTTGTAGTTAGAAGTTGCGGTCCTTACTTTAAAAATTTGAAGACATTATTCGTAGGGTGAGAAGATTCCAATCATCATAGACCATAAGAGATTAAAGCACTTTTAAAGTCGAAAGTTCTAAACACGGGACAACAATAAGTGCCCGAAGCTAGTTACATATTATAAAGTTGAGATATTATATAATAGTAAGTTAAACGGTTGAATTTTAGTAATATCTCCTCAAGCGAAAATTTGAAAGTATTACCATAGAAATTGAGGGAATCGAAGTAAATAATTCTTAAAATGTATATATATTAGATGGTTTTTTCCTTTCTCTTCTCATAATCTTAACTTATGTCAGTTTCTCCAAATCGATCGATGTCAAATAAGCGTACTAAGTTTTTTATATACTCAACGCCCGACATACCAACTCGAATGCGAAAGAAGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGTATTCTTTAGAAGTGTTCTTGCATAAATAGTGGATAGGATCAGTAGTTTTCTGTAGATATTTTACAATTCAGGTAGATATTTTACAATTTGTAGATGTTTTCTTTAGATTGTTCATGTGTAGGTAGTTTTCTTTAGATATTTTACAATTGGTAGATGTTTTCTTTAGATTGTTCATGTGTAGGTAGTTTTCTTTAGATATTTTACAATTCGTAGATGTTTTCTTTAGATGTGTTCTTGTGTAGGCTTCGTCGATTTTTTGTAGAGTTTTTTCGTATGTCCCAGTTCAAGAAATTATCCATTCTTAAATAAATGTCAATATCAGTAGTTTAATAGTTTTCACGTTTTGGATCTTGTTTATTGATTATATGTTTTCAATATTTTTAGGGGGCATCGAGTAA ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGGGGCATCGAGTAA ATGTCAGTTTCTCCATATCCATCGATGTCAAAGTGGCGCAATGCATTCTTTCTAATCACAACGCCGGACATGCCAACTCGGATGCGCAAGCAGATCGAGGAGATGCAAGGATACAATCTCCAATTGGTGATTCATAAGAAATTAATAGAAACTGATATGAACGAGAAAGATGGCCGTTTGTTTCTTATAATCAAGAAAATCTTATTCCATTTCATCACCCCAGACGAGGAGAAGCTCTTGAATGATGCAAACGGATTCATGGAAGTCAAGATTCTTGATGAGGGTCAAAGGATCGAGGACATGCATGGATACAATCTCCAGATGGTGATTTATAAGAAATTGATAGATATTGATATGAACAAGAAAGATGGCCGTATGTTTTTTCAAATCAAGAATATATTTTTCGATTTCCTCACCCCAAAGGAGAAGGAGATCTTGAATGATGCAAACGGAGTCATCGAAGTCAAGATTGTCGATGAGGCTCAAAGGGTGAGTCCCATGCTCTTGACCAAAGGCAAGATTAAAGAACATGATGTTTATCTTTTTACCACTCATTGGAATTCTTTTGTCGACAAAAATTGCTTGAAATTTGGCAACCTCATCCAACTTTGGAGTTTCAGAAGAGTTCGACTCGTAGACATCGATAATGAAATATTCACCTCTGATCTTTATTTTGCGTTGAATACCATGGATGGCCGATGGGGCATCGAGTAA MSVSPYPSMSKWRNAFFLITTPDMPTRMRKQIEEMQGYNLQLVIHKKLIETDMNEKDGRLFLIIKKILFHFITPDEEKLLNDANGFMEVKILDEGQRIEDMHGYNLQMVIYKKLIDIDMNKKDGRMFFQIKNIFFDFLTPKEKEILNDANGVIEVKIVDEAQRVSPMLLTKGKIKEHDVYLFTTHWNSFVDKNCLKFGNLIQLWSFRRVRLVDIDNEIFTSDLYFALNTMDGRWGIE
BLAST of Carg24204 vs. NCBI nr
Match: XP_022938320.1 (B3 domain-containing protein At1g05930-like [Cucurbita moschata]) HSP 1 Score: 291.6 bits (745), Expect = 2.4e-75 Identity = 156/233 (66.95%), Postives = 159/233 (68.24%), Query Frame = 0
BLAST of Carg24204 vs. NCBI nr
Match: XP_022938318.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata]) HSP 1 Score: 278.9 bits (712), Expect = 1.6e-71 Identity = 133/138 (96.38%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of Carg24204 vs. NCBI nr
Match: XP_022969589.1 (B3 domain-containing protein At2g31420-like [Cucurbita maxima]) HSP 1 Score: 278.1 bits (710), Expect = 2.8e-71 Identity = 132/138 (95.65%), Postives = 137/138 (99.28%), Query Frame = 0
BLAST of Carg24204 vs. NCBI nr
Match: XP_022938317.1 (B3 domain-containing protein At2g31420-like [Cucurbita moschata]) HSP 1 Score: 242.7 bits (618), Expect = 1.3e-60 Identity = 115/138 (83.33%), Postives = 130/138 (94.20%), Query Frame = 0
BLAST of Carg24204 vs. NCBI nr
Match: XP_022144152.1 (B3 domain-containing protein At2g31420-like [Momordica charantia]) HSP 1 Score: 95.5 bits (236), Expect = 2.6e-16 Identity = 57/147 (38.78%), Postives = 83/147 (56.46%), Query Frame = 0
BLAST of Carg24204 vs. TAIR10
Match: AT2G27410.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 50.1 bits (118), Expect = 2.2e-06 Identity = 35/115 (30.43%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of Carg24204 vs. TAIR10
Match: AT5G24050.1 (Domain of unknown function (DUF313) ) HSP 1 Score: 43.1 bits (100), Expect = 2.7e-04 Identity = 38/132 (28.79%), Postives = 60/132 (45.45%), Query Frame = 0
BLAST of Carg24204 vs. Swiss-Prot
Match: sp|Q9XIP5|Y2741_ARATH (Putative B3 domain-containing protein At2g27410 OS=Arabidopsis thaliana OX=3702 GN=At2g27410 PE=3 SV=2) HSP 1 Score: 50.1 bits (118), Expect = 4.0e-05 Identity = 35/115 (30.43%), Postives = 57/115 (49.57%), Query Frame = 0
BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S3BCJ5|A0A1S3BCJ5_CUCME (B3 domain-containing protein At3g25182-like OS=Cucumis melo OX=3656 GN=LOC103488545 PE=4 SV=1) HSP 1 Score: 89.7 bits (221), Expect = 9.3e-15 Identity = 55/151 (36.42%), Postives = 85/151 (56.29%), Query Frame = 0
BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A0A0KSY8|A0A0A0KSY8_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G570420 PE=4 SV=1) HSP 1 Score: 87.0 bits (214), Expect = 6.0e-14 Identity = 52/135 (38.52%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S4E600|A0A1S4E600_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504562 PE=4 SV=1) HSP 1 Score: 84.3 bits (207), Expect = 3.9e-13 Identity = 49/135 (36.30%), Postives = 72/135 (53.33%), Query Frame = 0
BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A0A0KP87|A0A0A0KP87_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_5G544060 PE=4 SV=1) HSP 1 Score: 82.8 bits (203), Expect = 1.1e-12 Identity = 45/116 (38.79%), Postives = 64/116 (55.17%), Query Frame = 0
BLAST of Carg24204 vs. TrEMBL
Match: tr|A0A1S3CSS4|A0A1S3CSS4_CUCME (putative B3 domain-containing protein At3g24850 OS=Cucumis melo OX=3656 GN=LOC103504467 PE=4 SV=1) HSP 1 Score: 82.4 bits (202), Expect = 1.5e-12 Identity = 45/119 (37.82%), Postives = 69/119 (57.98%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |