Carg20941-RA (mRNA) Silver-seed gourd

Overview
NameCarg20941-RA
TypemRNA
OrganismCucurbita argyrosperma (Silver-seed gourd)
DescriptionPatatin
LocationCucurbita_argyrosperma_scaffold_141 : 689848 .. 693186 (+)
Sequence length1172
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonfive_prime_UTRpolypeptideCDSthree_prime_UTR
Hold the cursor over a type above to highlight its positions in the sequence below.
TTAGGAATTGGATGGCCCAGACGCGAGAATTGCAGATTACTTCGACGTAATTGCAGGTACGAGCACCGGTGGCTTGGTTACCTCGATGCTTACGGCTCCCGACAAGAACAATCGCCCATTGTATGCAGCCAAGGATCTTACCAGCTTCTACACAGAACATGCACCAAAAATCTTCCCACAGAGAAAGTTAGCTTCATTTCTCTTGTAATTTTGTCAATTTCAAAGCTTTTTCTTCACTAAATTCAGTGGTCTTGTTAATGAACGCAGCCATTTCTTGAGCTCAGTGGTGAATTTGTTTGGGAAAGTGATGGGCCCAAAGTACGACGGCAAGTACTTGAGACGATTGATAAAGGATTTGCTTGGAGATATAAGGCTTAAGCAAACATTGACACAAATCATTATTCCTGCTTTCGATATCAAGCTTCTTCAGCCTGTGATTTTCACTACCATTGATGTATGAAACTTTATTTGATATGATGAAATTTGTTCATGTTTTTTAAGATGAAGTGATGAAATTGGGATTTTCAGGCTAAATGGGATGAGCTGAAGAACCCCAAACTGGCAGATGTTTGTATCAGTACCTCTGCAGCTCCTACTTTCCTACCAGGGCATGCATTTGAAACTATGGATTCCAACGGAAATGTTCGTAAATTTGATATGGTTGACGGGGGCGTCGCAGCCAATAATCCAGTAAGTTTTTTGTTCGGATTGAATTGGATTAGACATTTTTTATACCGAACGAGATTGTTCGATTCTAAATTTTTCTAAACTCAAACACTAACTCGATCATAAATTTTTTGAACTAGTTAGAGTAGTCATTTATTTGAGTTGAGTTGGGTTGATCGAGTTTTTCAAATCAACTGATTTTTTTTTAAGTAAATTTAGAAAAACCTATAAATCAACAAAATTTGTTAAAGTTTTCACTTATTTGAGTTGACTATAAATCAATTCAAATTCTAATATTTGAGTTAGGTTTGTGAGTTTTTTTCAAGTCAATAAATTTTTTAAAATTAGCAAATAAATCTGAACCAACCAAATTCATAAACTTTTTAATTTATTTGAATTTAGTCAACTCAAATAAGTTCATAAACCATCTAAAATCATTGTTTTTTGAGTTGGATTGCTCGAATTTTTCAAGTCAACGGATTTTTTTTTAATTAACAATAAATTTGAGTTGGTTCAGTTTAACTCAATTTAGTCTTAAGGAAACCTATGAACCAACCAAATTCATAAAATTTTTCATTTATTTGAACATAGTCAGCTCAAATAAGTTTATAAACCAACCCAAATGGTACTATTTTGAGATGGGTTGATCAAATTTTTTAAAATTAACAATAAATTTGAGTTGGTTCAGTTCCATCCAATTTAATGTTAGAAAAATCTATGAACCAATCAAATTCATTTATTTGAACCTAGTCAACTCAAATAAGTTCATAACTTAATCCAAATTATGTTATTTGAGTTGAGTTGATTGAGTTGTTCAGACGTTAGTTGATCTGATCGAGTGATTTGAATTGACGTTCAGACGTTAGCAGCAATTACTCATGTGACAAAAGAGATGAGCATATTGAGACAAAGAAGTGAACTAATGAAGATAAAGCCCATGGAAGCAAAAAGGATGCTGATTCTTTCATTGGGTACAGGCGCTCCTAAAAACGATGAGAAGTACAGCGCCGCCGTATCTTCCAAATGGGGTATGCTTGGCTGGATCTACAACGGCGGATCAACTCCCATTATCGACATCTTCAGTGATGCAAGCTGTGATATGGTCGACTATCATATTTCCAGCATCTTTCAGTGCGAGCAACATCACACGAATTACCTCCGTATTCAGGTAGACCAAATTAGATAGCTATTATGAGTTAAAAATCATGAAACTCGCAATAGTATGTATTCTTTACTTATATACTCATGATGAACCCCTTGATTAGTCAACGTAGGACTTTCTCCCGACAATTTTCAACAATTCTACTCTCGAACAAAGTACACTATAGAGCCACCTCTAAGGCCTATGTAGCCCTCGAACAGTCTCCCCTTAGTCGAGGCTCGACTCCTTTCTCTAAAACCCTCGAACAAAGTACACTCTTTGTTCGACACTTGAGTCACTTTTGTTTCTACTGACATGGTTAAGTTAAGGGCACAAATCTGATACCATGTTAGGAACCACGACTCTCCACATGGTATGTATTCTTTATTTATAAACCCATGATCAATCCCTTTGTTAGCCAATATGAGACTTTCTCCCAACAATTTTTAACAATCCTCCACCCGTAAGTACACCATAGAGCCTCTCCTGAGACTTATGTAACCCTTGAATAGCCTACCCCTCAATTGAGGCTCGACTTCTTTCTCTGGAGCCGTCGAACAAAGTACACCATTTATTTGACACTTGAGTCACTTTTGTTCAACGTTGAGGTTTGTATTGACATGGCTAAGTCAAGGGCAAGAATCTGATATCATGTTAGGAACCATAACTCTCCACATGGTATGGTTTATGATCAATCTCTTAATTAGACAATGTGAGATTCTCTCCCAACAATCCTTAACAATCCTCCACTTATAAGTACACCATAGAGCCTCCCTTGAGACTTATGTAGCCCTTGAACAGTCTACCTCTTAATCGAGGCTTGACTCCTTTCTTTGGAGCTCTCGAACAAAGTACACTATTTGTTCAACACTTGAGTCACTTTTGGCTCACCTTCGAGATTCACAACTTTTTTGTTCGACATTTGAGGTTTTTACTGACATGGCTAAGTTAAGAGTATGACTTTGATACCATGTTCGGAACCACGACTCTTCACAATAATATGATATTATCCAGGTAAAGCTCTCGTGGTTTACTTTTGATTTTTCCCAAAGGCCTCGTTCTAATAGAGGTGTATTCTTTACTTATAAACTCATAATCATTCTCTTAATTAGTTAACGTGGGACTCCCTCCCAACCATTCTCAAGATTTAAGCTTAGCTTTAACGTTTATAACGCCTCTAAAAATGAATTAAAACCGTGAACAGGACGACACGCTGACCAGCGATGTATCGTCGGTGGATATTGCAACCAGAGAGAATTTACTGAAGCTGGTTGAGGTGGGAGAGAGGTTGCTGAAGAAGCCATTGTCGAGGGTAAATTTGGAATCTGGAAAGTTTGAGCCTCTTGATGGGGAAGGTACCAATGAAGAAGCTCTCGCTGAATTTGCTAAGATGCTGTCGGAAGAGAGAAAATTACGATTGAGCCCTTGAGTTCCTAGATTCTTCTTGTTCTTCATCATTCCATGTTTTATTACAATAAATTTGGGTATCCAAGGTTATCCAATTATCTCTCGTTTGTAATATTATTAAAATG

mRNA sequence

TTAGGAATTGGATGGCCCAGACGCGAGAATTGCAGATTACTTCGACGTAATTGCAGGTACGAGCACCGGTGGCTTGGTTACCTCGATGCTTACGGCTCCCGACAAGAACAATCGCCCATTGTATGCAGCCAAGGATCTTACCAGCTTCTACACAGAACATGCACCAAAAATCTTCCCACAGAGAAACCATTTCTTGAGCTCAGTGGTGAATTTGTTTGGGAAAGTGATGGGCCCAAAGTACGACGGCAAGTACTTGAGACGATTGATAAAGGATTTGCTTGGAGATATAAGGCTTAAGCAAACATTGACACAAATCATTATTCCTGCTTTCGATATCAAGCTTCTTCAGCCTGTGATTTTCACTACCATTGATGCTAAATGGGATGAGCTGAAGAACCCCAAACTGGCAGATGTTTGTATCAGTACCTCTGCAGCTCCTACTTTCCTACCAGGGCATGCATTTGAAACTATGGATTCCAACGGAAATGTTCGTAAATTTGATATGGTTGACGGGGGCGTCGCAGCCAATAATCCAACGTTAGCAGCAATTACTCATGTGACAAAAGAGATGAGCATATTGAGACAAAGAAGTGAACTAATGAAGATAAAGCCCATGGAAGCAAAAAGGATGCTGATTCTTTCATTGGGTACAGGCGCTCCTAAAAACGATGAGAAGTACAGCGCCGCCGTATCTTCCAAATGGGGTATGCTTGGCTGGATCTACAACGGCGGATCAACTCCCATTATCGACATCTTCAGTGATGCAAGCTGTGATATGGTCGACTATCATATTTCCAGCATCTTTCAGTGCGAGCAACATCACACGAATTACCTCCGTATTCAGGACGACACGCTGACCAGCGATGTATCGTCGGTGGATATTGCAACCAGAGAGAATTTACTGAAGCTGGTTGAGGTGGGAGAGAGGTTGCTGAAGAAGCCATTGTCGAGGGTAAATTTGGAATCTGGAAAGTTTGAGCCTCTTGATGGGGAAGGTACCAATGAAGAAGCTCTCGCTGAATTTGCTAAGATGCTGTCGGAAGAGAGAAAATTACGATTGAGCCCTTGAGTTCCTAGATTCTTCTTGTTCTTCATCATTCCATGTTTTATTACAATAAATTTGGGTATCCAAGGTTATCCAATTATCTCTCGTTTGTAATATTATTAAAATG

Coding sequence (CDS)

ATGCTTACGGCTCCCGACAAGAACAATCGCCCATTGTATGCAGCCAAGGATCTTACCAGCTTCTACACAGAACATGCACCAAAAATCTTCCCACAGAGAAACCATTTCTTGAGCTCAGTGGTGAATTTGTTTGGGAAAGTGATGGGCCCAAAGTACGACGGCAAGTACTTGAGACGATTGATAAAGGATTTGCTTGGAGATATAAGGCTTAAGCAAACATTGACACAAATCATTATTCCTGCTTTCGATATCAAGCTTCTTCAGCCTGTGATTTTCACTACCATTGATGCTAAATGGGATGAGCTGAAGAACCCCAAACTGGCAGATGTTTGTATCAGTACCTCTGCAGCTCCTACTTTCCTACCAGGGCATGCATTTGAAACTATGGATTCCAACGGAAATGTTCGTAAATTTGATATGGTTGACGGGGGCGTCGCAGCCAATAATCCAACGTTAGCAGCAATTACTCATGTGACAAAAGAGATGAGCATATTGAGACAAAGAAGTGAACTAATGAAGATAAAGCCCATGGAAGCAAAAAGGATGCTGATTCTTTCATTGGGTACAGGCGCTCCTAAAAACGATGAGAAGTACAGCGCCGCCGTATCTTCCAAATGGGGTATGCTTGGCTGGATCTACAACGGCGGATCAACTCCCATTATCGACATCTTCAGTGATGCAAGCTGTGATATGGTCGACTATCATATTTCCAGCATCTTTCAGTGCGAGCAACATCACACGAATTACCTCCGTATTCAGGACGACACGCTGACCAGCGATGTATCGTCGGTGGATATTGCAACCAGAGAGAATTTACTGAAGCTGGTTGAGGTGGGAGAGAGGTTGCTGAAGAAGCCATTGTCGAGGGTAAATTTGGAATCTGGAAAGTTTGAGCCTCTTGATGGGGAAGGTACCAATGAAGAAGCTCTCGCTGAATTTGCTAAGATGCTGTCGGAAGAGAGAAAATTACGATTGAGCCCTTGA

Protein sequence

MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRLIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTFLPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAKRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIFQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPLDGEGTNEEALAEFAKMLSEERKLRLSP
Homology
[Close]
BLAST of Carg20941-RA vs. NCBI nr
Match: XP_022928076.1 (patatin-like protein 2 isoform X1 [Cucurbita moschata])

HSP 1 Score: 649.8 bits (1675), Expect = 4.9e-183
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL
Sbjct: 66  MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 125

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF
Sbjct: 126 IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 185

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK
Sbjct: 186 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 245

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF
Sbjct: 246 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 305

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL
Sbjct: 306 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 365

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNEEALAEFAKMLSEERKLRLSP
Sbjct: 366 DGEGTNEEALAEFAKMLSEERKLRLSP 392

[Close]
BLAST of Carg20941-RA vs. NCBI nr
Match: XP_022928077.1 (patatin-like protein 3 isoform X2 [Cucurbita moschata])

HSP 1 Score: 649.8 bits (1675), Expect = 4.9e-183
Identity = 327/327 (100.00%), Postives = 327/327 (100.00%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL
Sbjct: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF
Sbjct: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK
Sbjct: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF
Sbjct: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL
Sbjct: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNEEALAEFAKMLSEERKLRLSP
Sbjct: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 327

[Close]
BLAST of Carg20941-RA vs. NCBI nr
Match: XP_023513150.1 (patatin-like protein 3 [Cucurbita pepo subsp. pepo])

HSP 1 Score: 644.0 bits (1660), Expect = 2.7e-181
Identity = 323/327 (98.78%), Postives = 324/327 (99.08%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSS VNLFGKVMGPKYDGKYLRRL
Sbjct: 66  MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSAVNLFGKVMGPKYDGKYLRRL 125

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF
Sbjct: 126 IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 185

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK
Sbjct: 186 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 245

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTG PKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF
Sbjct: 246 RMLILSLGTGVPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 305

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           QCEQHH NYLRIQDDTLTSDVSSVDIATRENLLKL+EVGERLLKKPLSRVNLESGKFEPL
Sbjct: 306 QCEQHHRNYLRIQDDTLTSDVSSVDIATRENLLKLIEVGERLLKKPLSRVNLESGKFEPL 365

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNEEALAEFAKMLSEERKLRLSP
Sbjct: 366 DGEGTNEEALAEFAKMLSEERKLRLSP 392

[Close]
BLAST of Carg20941-RA vs. NCBI nr
Match: XP_008457873.1 (PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo])

HSP 1 Score: 562.4 bits (1448), Expect = 1.0e-156
Identity = 277/327 (84.71%), Postives = 302/327 (92.35%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP++NNRPLYAAKDLT FY EH PKIFPQRNHFLSS+VN+FGKVMGPKYDGKYLR L
Sbjct: 66  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSMVNMFGKVMGPKYDGKYLRSL 125

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I  LLGDI LKQTLT++IIPAFDIKLLQPVIF+T+DAKWD LKNPKLADVCISTSAAPTF
Sbjct: 126 INRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCISTSAAPTF 185

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGH F+T DS GN R FDMVDGGVAANNPTLAA+THVTKEMSILR RSEL+KIKPMEAK
Sbjct: 186 LPGHEFQTKDSKGNTRNFDMVDGGVAANNPTLAALTHVTKEMSILRNRSELLKIKPMEAK 245

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTG  KNDEKYSAA++SKWGMLGWIY+ G+TPI+DIFSDAS DMVDYHISSIF
Sbjct: 246 RMLILSLGTGVAKNDEKYSAAIASKWGMLGWIYHRGATPIVDIFSDASADMVDYHISSIF 305

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           Q E +  NYLRIQDDTL+ DVSSVDIAT++NLLKL+EVGE LLKKPLSRVNLESG FEPL
Sbjct: 306 QSEHNQKNYLRIQDDTLSGDVSSVDIATQQNLLKLIEVGENLLKKPLSRVNLESGNFEPL 365

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNE+ALA+FA+MLS+ERKLRLSP
Sbjct: 366 DGEGTNEKALADFAQMLSDERKLRLSP 392

[Close]
BLAST of Carg20941-RA vs. NCBI nr
Match: XP_011649366.1 (PREDICTED: patatin-like protein 2 [Cucumis sativus])

HSP 1 Score: 561.2 bits (1445), Expect = 2.3e-156
Identity = 279/327 (85.32%), Postives = 303/327 (92.66%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP++NNRPLYAAKDLT FY EH PKIFPQRN+FLSSVVN+FGKVMGPKYDGKYLR L
Sbjct: 69  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNYFLSSVVNMFGKVMGPKYDGKYLRSL 128

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I  LLGDI LK+TLTQ+IIPAFDIKLLQPVIF+T+DAKWD LKNPKLADVCISTSAAPTF
Sbjct: 129 INRLLGDITLKETLTQVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCISTSAAPTF 188

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGH F+T DS GN R FDMVDGGVAANNPTLAA+THVTKEMSILR+RSEL+KIKPMEAK
Sbjct: 189 LPGHEFQTKDSKGNTRNFDMVDGGVAANNPTLAALTHVTKEMSILRKRSELLKIKPMEAK 248

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTG  KNDEKYSAA+SSKWGMLGWIY+ G+TPI+DIFSDAS DMVDYHISSIF
Sbjct: 249 RMLILSLGTGVAKNDEKYSAAMSSKWGMLGWIYHRGATPIVDIFSDASADMVDYHISSIF 308

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           Q E +  NYLRIQDDTL+ DVSSVDIAT++NLLKL+EVGE LLKKPLSRVNLESGKFE L
Sbjct: 309 QSEHNDRNYLRIQDDTLSGDVSSVDIATQQNLLKLIEVGESLLKKPLSRVNLESGKFEAL 368

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNE+ALAEFA+MLS+ERKLRLSP
Sbjct: 369 DGEGTNEKALAEFAQMLSDERKLRLSP 395

[Close]
BLAST of Carg20941-RA vs. TAIR10
Match: AT4G37050.1 (PATATIN-like protein 4)

HSP 1 Score: 338.2 bits (866), Expect = 5.7e-93
Identity = 174/334 (52.10%), Postives = 235/334 (70.36%), Query Frame = 0 

Query: 1   MLTAPDK-------NNRPLYAAKDLTSFYTEHAPKIFPQ-RNHFLSSVVNLFGKVMGPKY 60
           MLTA D+       +NRPL+ AK++  FY +H+PKIFPQ R  F      +   V GPK+
Sbjct: 90  MLTAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVGGPKF 149

Query: 61  DGKYLRRLIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCI 120
           +GKYL  L++  LGD +L Q+LT ++IP FDIK LQPVIF++  A  ++  N KL+D+CI
Sbjct: 150 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICI 209

Query: 121 STSAAPTFLPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELM 180
           STSAAPTF P H F   DS G   +F+++DGG+AANNPTL AI  VTK+  I+++   + 
Sbjct: 210 STSAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQ--IIKKNPVMG 269

Query: 181 KIKPMEAKRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMV 240
            I P++  R L++S+GTG+ +N EKY+A ++SKWG++ W++  GSTPI+D +S+A  DMV
Sbjct: 270 DISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMV 329

Query: 241 DYHISSIFQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNL 300
           DY  S +FQ  +   NYLRI DD+L  D+ SVDI+T +N+  LVEVGE LLKK +SRVNL
Sbjct: 330 DYQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNL 389

Query: 301 ESGKFEPLDGEGTNEEALAEFAKMLSEERKLRLS 327
           ESG ++P+    TNEEAL  FAK+LSEERKLR S
Sbjct: 390 ESGHYQPISENVTNEEALKRFAKVLSEERKLRES 421

[Close]
BLAST of Carg20941-RA vs. TAIR10
Match: AT2G26560.1 (phospholipase A 2A)

HSP 1 Score: 328.6 bits (841), Expect = 4.5e-90
Identity = 172/324 (53.09%), Postives = 225/324 (69.44%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP+K  RPL+AA ++  FY E  PKIFPQ +   S+   L   + GPKYDGKYL +L
Sbjct: 74  MLTAPNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQL 133

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I   LGD +L QTLT ++IP FDIK LQP IF++ + K   LK+  LAD+ ISTSAAPT+
Sbjct: 134 IHAKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTY 193

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LP H F+  D NGN ++++++DGGVAANNP L AI  VT E+S     S+   I+P +  
Sbjct: 194 LPAHFFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEIS--GGSSDFFPIRPNDYG 253

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           R L+LSLGTG  K +EK++A   + WG+L W+ +  STPIID FS AS DMVD+H+S++F
Sbjct: 254 RFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVF 313

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           +      NY+RIQDDTLT D +SVDIAT ENL  L + G+ LLKKP++RVNL+SG  E  
Sbjct: 314 RALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA 373

Query: 301 DGEGTNEEALAEFAKMLSEERKLR 325
             E TNE AL + A +LS+E+K+R
Sbjct: 374 -YETTNEHALIKLAGILSKEKKIR 394

[Close]
BLAST of Carg20941-RA vs. TAIR10
Match: AT4G37070.2 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 327.4 bits (838), Expect = 1.0e-89
Identity = 161/324 (49.69%), Postives = 225/324 (69.44%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLT PD+  RP +AAKD+  FY EH PKIFPQ    L+ +  L   + GPKY GKYLR L
Sbjct: 74  MLTVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNL 133

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           +  LLG+ RL QTLT I+IP FDIK LQP IF++     D   + K++D+CI TSAAPTF
Sbjct: 134 LSKLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTF 193

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
            P H F   DS GN  +F++VDG V ANNPTL A+T V+K+  I++   ++ K+KP+   
Sbjct: 194 FPPHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQ--IVKNNPDMGKLKPLGFD 253

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           R L++S+GTG+ K +EKYSA  ++KWG++ W+Y+ GSTPI+DI  ++S DM+ YH S +F
Sbjct: 254 RFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVF 313

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           +  Q    YLRI DDTL  DVS++D+AT+ NL  L ++GE++L   + ++N+++G +EP+
Sbjct: 314 KALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPV 373

Query: 301 DGEGTNEEALAEFAKMLSEERKLR 325
               TN+E L  +AK+LS+ERKLR
Sbjct: 374 AENITNDEQLKRYAKILSDERKLR 395

[Close]
BLAST of Carg20941-RA vs. TAIR10
Match: AT4G37060.2 (PATATIN-like protein 5)

HSP 1 Score: 315.5 bits (807), Expect = 3.9e-86
Identity = 153/324 (47.22%), Postives = 221/324 (68.21%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPD+N RP +AAK++  FY EH PKIFPQ    L+ +  L   + GPKY G YLR  
Sbjct: 95  MLTAPDENGRPRFAAKEIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGNYLRTT 154

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           +  LLG+ +L+QTLT ++IP FDIK LQP IF++  A  D   + K++D+CI TSAAPT+
Sbjct: 155 LGKLLGETKLRQTLTNVVIPTFDIKTLQPTIFSSYQALTDPSLDVKVSDICIGTSAAPTY 214

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
            P + F   DS G  R F++VDGGV ANNPTL A+T VTK+  I+    ++  + P+   
Sbjct: 215 FPPYYFSNEDSQGKTRHFNLVDGGVTANNPTLVAMTAVTKQ--IVNNNPDMGTLNPLGYD 274

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           + L++S+GTG+ K +E+YSA  ++KWG++ W+Y  G+TPI+DI  ++S D+V YH S +F
Sbjct: 275 QFLVISIGTGSAKKEERYSAKKAAKWGIISWLYEDGTTPILDITFESSRDIVHYHSSVVF 334

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           +  Q    YLRI DDTL  D S++D++T+ NL  L+++GE++L   + ++N+++G +EP 
Sbjct: 335 KALQSEDKYLRIDDDTLEGDASTLDLSTKSNLENLIKLGEKMLTNRVMQMNIDTGTYEPA 394

Query: 301 DGEGTNEEALAEFAKMLSEERKLR 325
                N+E L  FAK+LSEERKLR
Sbjct: 395 AENINNDEQLKRFAKILSEERKLR 416

[Close]
BLAST of Carg20941-RA vs. TAIR10
Match: AT5G43590.1 (Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein)

HSP 1 Score: 261.5 bits (667), Expect = 6.8e-70
Identity = 140/326 (42.94%), Postives = 207/326 (63.50%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP+ + RPLYAAKD+  FY E +PKIF     +  S +     +  PKY+G+YL   
Sbjct: 70  MLTAPNDSGRPLYAAKDIVPFYLEESPKIFYGSKWWDPSAL---WALFRPKYNGEYLHTR 129

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           + ++LG+ +L QTLT ++IP FDIK LQP IF++  A  D   N KL+D+CI TSAAP +
Sbjct: 130 LGEILGETKLDQTLTNVVIPTFDIKKLQPTIFSSYHASVDPSLNAKLSDICIGTSAAPFY 189

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LP + F     N  +R F+++DGGV AN+PTL  +T ++++  I  +  ++   KP+E +
Sbjct: 190 LPPYKF---PENDKMRTFNLIDGGVTANDPTLVGMTAMSRKSII--KHPDMDGFKPLEYE 249

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYN--GGSTPIIDIFSDASCDMVDYHISS 240
           + +++S+GTG+ K +E YSA  ++KWG   W YN    +TPI+DI  ++S DMV YH S 
Sbjct: 250 KYIVISIGTGSAKREEYYSAVEAAKWGFENWAYNWKHKTTPILDIIFESSRDMVQYHTSV 309

Query: 241 IFQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFE 300
           +FQ  +   NYLRI  DTL  D   +D +   NL  L  +GE+LL   + R+NL++  +E
Sbjct: 310 LFQALESEDNYLRIDADTLKKDEVFMDDSETLNLENLKNIGEKLLDTNVMRMNLDTYTYE 369

Query: 301 PLDGEGTNEEALAEFAKMLSEERKLR 325
           P+     N++ L  FAK+LS+E+KLR
Sbjct: 370 PIPKTVNNDQELKRFAKILSDEKKLR 387

[Close]
BLAST of Carg20941-RA vs. Swiss-Prot
Match: sp|O23181|PLP3_ARATH (Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2)

HSP 1 Score: 338.2 bits (866), Expect = 1.0e-91
Identity = 174/334 (52.10%), Postives = 235/334 (70.36%), Query Frame = 0 

Query: 1   MLTAPDK-------NNRPLYAAKDLTSFYTEHAPKIFPQ-RNHFLSSVVNLFGKVMGPKY 60
           MLTA D+       +NRPL+ AK++  FY +H+PKIFPQ R  F      +   V GPK+
Sbjct: 90  MLTAQDQSGGHSRNSNRPLFEAKEIVPFYLKHSPKIFPQPRGIFCGWGETIVRLVGGPKF 149

Query: 61  DGKYLRRLIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCI 120
           +GKYL  L++  LGD +L Q+LT ++IP FDIK LQPVIF++  A  ++  N KL+D+CI
Sbjct: 150 NGKYLHDLVEGFLGDTKLTQSLTNVVIPCFDIKKLQPVIFSSYQAVNNQAMNAKLSDICI 209

Query: 121 STSAAPTFLPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELM 180
           STSAAPTF P H F   DS G   +F+++DGG+AANNPTL AI  VTK+  I+++   + 
Sbjct: 210 STSAAPTFFPAHRFTNEDSEGIKHEFNLIDGGIAANNPTLCAIAEVTKQ--IIKKNPVMG 269

Query: 181 KIKPMEAKRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMV 240
            I P++  R L++S+GTG+ +N EKY+A ++SKWG++ W++  GSTPI+D +S+A  DMV
Sbjct: 270 DISPLDFTRFLVISIGTGSIRNQEKYNAKMASKWGLMCWVFESGSTPILDCYSEAIHDMV 329

Query: 241 DYHISSIFQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNL 300
           DY  S +FQ  +   NYLRI DD+L  D+ SVDI+T +N+  LVEVGE LLKK +SRVNL
Sbjct: 330 DYQSSVVFQALRSEKNYLRIDDDSLKGDLGSVDISTEKNMEGLVEVGEALLKKRVSRVNL 389

Query: 301 ESGKFEPLDGEGTNEEALAEFAKMLSEERKLRLS 327
           ESG ++P+    TNEEAL  FAK+LSEERKLR S
Sbjct: 390 ESGHYQPISENVTNEEALKRFAKVLSEERKLRES 421

[Close]
BLAST of Carg20941-RA vs. Swiss-Prot
Match: sp|A2YW91|PLP2_ORYSI (Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.3e-90
Identity = 164/325 (50.46%), Postives = 225/325 (69.23%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP++NNRPL+AA +L  FY EH+P IFPQ+N  LS +      V GPKYDGKYL  L
Sbjct: 76  MLTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSL 135

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           +++ LGD RL + LT ++IP FDI  LQP IF+  + K+  LKN  L+D+ ISTSAAPTF
Sbjct: 136 LREKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTF 195

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSIL-RQRSELMKIKPMEA 180
            P H FET D NG  R+F++VDGGVAANNPTL A++ V+K + +  ++  +   +KP E 
Sbjct: 196 FPAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEY 255

Query: 181 KRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSI 240
            + +++S+G G+  +D+KY A  ++KWG+  W+  G S PIID+F+ AS DMVD H+  +
Sbjct: 256 GKFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVL 315

Query: 241 FQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEP 300
           F   Q   NYLRIQ D LT    S+D  ++EN+  LV++GE LL K +SRV+LE+G +  
Sbjct: 316 FSALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVD 375

Query: 301 LDGEGTNEEALAEFAKMLSEERKLR 325
           + GEGTN + LA+FAK LS+ER+ R
Sbjct: 376 VAGEGTNRDQLAKFAKQLSDERRRR 399

[Close]
BLAST of Carg20941-RA vs. Swiss-Prot
Match: sp|Q6ZJD3|PLP2_ORYSJ (Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=1)

HSP 1 Score: 332.8 bits (852), Expect = 4.3e-90
Identity = 164/325 (50.46%), Postives = 225/325 (69.23%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP++NNRPL+AA +L  FY EH+P IFPQ+N  LS +      V GPKYDGKYL  L
Sbjct: 76  MLTAPNENNRPLFAADELAKFYIEHSPSIFPQKNWVLSKIAGTLRMVSGPKYDGKYLHSL 135

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           +++ LGD RL + LT ++IP FDI  LQP IF+  + K+  LKN  L+D+ ISTSAAPTF
Sbjct: 136 LREKLGDTRLDKALTNVVIPTFDIANLQPTIFSKFELKYKPLKNALLSDISISTSAAPTF 195

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSIL-RQRSELMKIKPMEA 180
            P H FET D NG  R+F++VDGGVAANNPTL A++ V+K + +  ++  +   +KP E 
Sbjct: 196 FPAHYFETKDDNGQTREFNLVDGGVAANNPTLCAMSQVSKYIILEDKEDCDFFPVKPTEY 255

Query: 181 KRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSI 240
            + +++S+G G+  +D+KY A  ++KWG+  W+  G S PIID+F+ AS DMVD H+  +
Sbjct: 256 GKFMVISIGCGS-NHDQKYKAKDAAKWGIFNWLIKGSSAPIIDMFTSASADMVDIHLGVL 315

Query: 241 FQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEP 300
           F   Q   NYLRIQ D LT    S+D  ++EN+  LV++GE LL K +SRV+LE+G +  
Sbjct: 316 FSALQCEKNYLRIQYDQLTGSAGSIDDCSKENMDNLVKIGEMLLDKNVSRVDLETGHYVD 375

Query: 301 LDGEGTNEEALAEFAKMLSEERKLR 325
           + GEGTN + LA+FAK LS+ER+ R
Sbjct: 376 VAGEGTNRDQLAKFAKQLSDERRRR 399

[Close]
BLAST of Carg20941-RA vs. Swiss-Prot
Match: sp|O48723|PLP2_ARATH (Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1)

HSP 1 Score: 328.6 bits (841), Expect = 8.1e-89
Identity = 172/324 (53.09%), Postives = 225/324 (69.44%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP+K  RPL+AA ++  FY E  PKIFPQ +   S+   L   + GPKYDGKYL +L
Sbjct: 74  MLTAPNKEGRPLFAASEIKDFYLEQCPKIFPQDHFPFSAAKKLVKSLTGPKYDGKYLHQL 133

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I   LGD +L QTLT ++IP FDIK LQP IF++ + K   LK+  LAD+ ISTSAAPT+
Sbjct: 134 IHAKLGDTKLSQTLTNVVIPTFDIKHLQPTIFSSYEVKNHPLKDATLADIAISTSAAPTY 193

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LP H F+  D NGN ++++++DGGVAANNP L AI  VT E+S     S+   I+P +  
Sbjct: 194 LPAHFFKVEDLNGNAKEYNLIDGGVAANNPALLAIGEVTNEIS--GGSSDFFPIRPNDYG 253

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           R L+LSLGTG  K +EK++A   + WG+L W+ +  STPIID FS AS DMVD+H+S++F
Sbjct: 254 RFLVLSLGTGNHKAEEKFNAKEVAGWGLLNWLTHDNSTPIIDAFSQASSDMVDFHLSAVF 313

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           +      NY+RIQDDTLT D +SVDIAT ENL  L + G+ LLKKP++RVNL+SG  E  
Sbjct: 314 RALHSEANYIRIQDDTLTGDAASVDIATVENLDILAKTGDELLKKPVARVNLDSGCNENA 373

Query: 301 DGEGTNEEALAEFAKMLSEERKLR 325
             E TNE AL + A +LS+E+K+R
Sbjct: 374 -YETTNEHALIKLAGILSKEKKIR 394

[Close]
BLAST of Carg20941-RA vs. Swiss-Prot
Match: sp|O23179|PLP1_ARATH (Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2)

HSP 1 Score: 327.4 bits (838), Expect = 1.8e-88
Identity = 161/324 (49.69%), Postives = 225/324 (69.44%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLT PD+  RP +AAKD+  FY EH PKIFPQ    L+ +  L   + GPKY GKYLR L
Sbjct: 74  MLTVPDETGRPHFAAKDIVPFYLEHCPKIFPQPTGVLALLPKLPKLLSGPKYSGKYLRNL 133

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           +  LLG+ RL QTLT I+IP FDIK LQP IF++     D   + K++D+CI TSAAPTF
Sbjct: 134 LSKLLGETRLHQTLTNIVIPTFDIKKLQPTIFSSYQLLVDPSLDVKVSDICIGTSAAPTF 193

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
            P H F   DS GN  +F++VDG V ANNPTL A+T V+K+  I++   ++ K+KP+   
Sbjct: 194 FPPHYFSNEDSQGNKTEFNLVDGAVTANNPTLVAMTAVSKQ--IVKNNPDMGKLKPLGFD 253

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           R L++S+GTG+ K +EKYSA  ++KWG++ W+Y+ GSTPI+DI  ++S DM+ YH S +F
Sbjct: 254 RFLVISIGTGSTKREEKYSAKKAAKWGIISWLYDDGSTPILDITMESSRDMIHYHSSVVF 313

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           +  Q    YLRI DDTL  DVS++D+AT+ NL  L ++GE++L   + ++N+++G +EP+
Sbjct: 314 KALQSEDKYLRIDDDTLEGDVSTMDLATKSNLENLQKIGEKMLTNRVMQMNIDTGVYEPV 373

Query: 301 DGEGTNEEALAEFAKMLSEERKLR 325
               TN+E L  +AK+LS+ERKLR
Sbjct: 374 AENITNDEQLKRYAKILSDERKLR 395

[Close]
BLAST of Carg20941-RA vs. TrEMBL
Match: tr|A0A1S3C761|A0A1S3C761_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1)

HSP 1 Score: 562.4 bits (1448), Expect = 6.8e-157
Identity = 277/327 (84.71%), Postives = 302/327 (92.35%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAP++NNRPLYAAKDLT FY EH PKIFPQRNHFLSS+VN+FGKVMGPKYDGKYLR L
Sbjct: 66  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNHFLSSMVNMFGKVMGPKYDGKYLRSL 125

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I  LLGDI LKQTLT++IIPAFDIKLLQPVIF+T+DAKWD LKNPKLADVCISTSAAPTF
Sbjct: 126 INRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCISTSAAPTF 185

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPGH F+T DS GN R FDMVDGGVAANNPTLAA+THVTKEMSILR RSEL+KIKPMEAK
Sbjct: 186 LPGHEFQTKDSKGNTRNFDMVDGGVAANNPTLAALTHVTKEMSILRNRSELLKIKPMEAK 245

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RMLILSLGTG  KNDEKYSAA++SKWGMLGWIY+ G+TPI+DIFSDAS DMVDYHISSIF
Sbjct: 246 RMLILSLGTGVAKNDEKYSAAIASKWGMLGWIYHRGATPIVDIFSDASADMVDYHISSIF 305

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           Q E +  NYLRIQDDTL+ DVSSVDIAT++NLLKL+EVGE LLKKPLSRVNLESG FEPL
Sbjct: 306 QSEHNQKNYLRIQDDTLSGDVSSVDIATQQNLLKLIEVGENLLKKPLSRVNLESGNFEPL 365

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           DGEGTNE+ALA+FA+MLS+ERKLRLSP
Sbjct: 366 DGEGTNEKALADFAQMLSDERKLRLSP 392

[Close]
BLAST of Carg20941-RA vs. TrEMBL
Match: tr|A0A1S4E1P9|A0A1S4E1P9_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1)

HSP 1 Score: 557.8 bits (1436), Expect = 1.7e-155
Identity = 277/328 (84.45%), Postives = 302/328 (92.07%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRN-HFLSSVVNLFGKVMGPKYDGKYLRR 60
           MLTAP++NNRPLYAAKDLT FY EH PKIFPQRN HFLSS+VN+FGKVMGPKYDGKYLR 
Sbjct: 66  MLTAPNENNRPLYAAKDLTRFYIEHGPKIFPQRNSHFLSSMVNMFGKVMGPKYDGKYLRS 125

Query: 61  LIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPT 120
           LI  LLGDI LKQTLT++IIPAFDIKLLQPVIF+T+DAKWD LKNPKLADVCISTSAAPT
Sbjct: 126 LINRLLGDITLKQTLTEVIIPAFDIKLLQPVIFSTLDAKWDALKNPKLADVCISTSAAPT 185

Query: 121 FLPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEA 180
           FLPGH F+T DS GN R FDMVDGGVAANNPTLAA+THVTKEMSILR RSEL+KIKPMEA
Sbjct: 186 FLPGHEFQTKDSKGNTRNFDMVDGGVAANNPTLAALTHVTKEMSILRNRSELLKIKPMEA 245

Query: 181 KRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSI 240
           KRMLILSLGTG  KNDEKYSAA++SKWGMLGWIY+ G+TPI+DIFSDAS DMVDYHISSI
Sbjct: 246 KRMLILSLGTGVAKNDEKYSAAIASKWGMLGWIYHRGATPIVDIFSDASADMVDYHISSI 305

Query: 241 FQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEP 300
           FQ E +  NYLRIQDDTL+ DVSSVDIAT++NLLKL+EVGE LLKKPLSRVNLESG FEP
Sbjct: 306 FQSEHNQKNYLRIQDDTLSGDVSSVDIATQQNLLKLIEVGENLLKKPLSRVNLESGNFEP 365

Query: 301 LDGEGTNEEALAEFAKMLSEERKLRLSP 328
           LDGEGTNE+ALA+FA+MLS+ERKLRLSP
Sbjct: 366 LDGEGTNEKALADFAQMLSDERKLRLSP 393

[Close]
BLAST of Carg20941-RA vs. TrEMBL
Match: tr|A0A1S3C6I1|A0A1S3C6I1_CUCME (Patatin OS=Cucumis melo OX=3656 GN=LOC103497452 PE=3 SV=1)

HSP 1 Score: 544.7 bits (1402), Expect = 1.5e-151
Identity = 275/327 (84.10%), Postives = 293/327 (89.60%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPDKNNRPLYAAKDLT FY EHAPKIFPQRNHFLSSV+N  GKVMGP+YDGKYLR L
Sbjct: 67  MLTAPDKNNRPLYAAKDLTRFYVEHAPKIFPQRNHFLSSVMNSLGKVMGPRYDGKYLRTL 126

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           I +LLGDI LK+TLTQ+IIPAFDIK LQPVIFTT+DAK DELKNPKLADVCISTSAAPT 
Sbjct: 127 INNLLGDITLKETLTQVIIPAFDIKRLQPVIFTTVDAKLDELKNPKLADVCISTSAAPTI 186

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPME-A 180
           LP H FE  DS GN R+FDMVDG VAANNPTLAA+THV KEMSI +++SELM IKPME A
Sbjct: 187 LPSHEFEIKDSKGNKRRFDMVDGAVAANNPTLAAMTHVRKEMSIWKEKSELMPIKPMETA 246

Query: 181 KRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSI 240
           KRMLILSLGTGAPKN+EKYSAAVSSKWGMLGWIY+ GSTPIIDIF+DAS DMVDYHI+S+
Sbjct: 247 KRMLILSLGTGAPKNEEKYSAAVSSKWGMLGWIYHSGSTPIIDIFTDASADMVDYHIASV 306

Query: 241 FQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEP 300
           FQ E H  NYLRIQDDTLT DVSSVD+AT ENLLKL+EVGE LLKK LSRVNLESGKFEP
Sbjct: 307 FQSEHHQKNYLRIQDDTLTGDVSSVDVATEENLLKLIEVGENLLKKQLSRVNLESGKFEP 366

Query: 301 LDGEGTNEEALAEFAKMLSEERKLRLS 327
           LDG GTNEEAL EFA MLSEERKLRLS
Sbjct: 367 LDGHGTNEEALIEFAAMLSEERKLRLS 393

[Close]
BLAST of Carg20941-RA vs. TrEMBL
Match: tr|O23784|O23784_CUCSA (Patatin (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1)

HSP 1 Score: 538.1 bits (1385), Expect = 1.4e-149
Identity = 266/327 (81.35%), Postives = 293/327 (89.60%), Query Frame = 0 

Query: 1   MLTAPDKNNRPLYAAKDLTSFYTEHAPKIFPQRNHFLSSVVNLFGKVMGPKYDGKYLRRL 60
           MLTAPDKNNRPLY+A DL  FY EHAPKIFPQRN+FL S+VN FGKVMGPKY+G YLR L
Sbjct: 79  MLTAPDKNNRPLYSASDLALFYIEHAPKIFPQRNYFLCSLVNFFGKVMGPKYNGLYLRSL 138

Query: 61  IKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFTTIDAKWDELKNPKLADVCISTSAAPTF 120
           IK LLGDI LKQTL+Q++IPAFDIKLLQPVIFTTI+AK  ELKNPKLADVCISTSAAPTF
Sbjct: 139 IKGLLGDITLKQTLSQVVIPAFDIKLLQPVIFTTIEAKCSELKNPKLADVCISTSAAPTF 198

Query: 121 LPGHAFETMDSNGNVRKFDMVDGGVAANNPTLAAITHVTKEMSILRQRSELMKIKPMEAK 180
           LPG+ F+T DS GN+R ++MVDGGVAANNPTLAA+THVTKEMSILR RSEL+KIKPME +
Sbjct: 199 LPGYEFQTKDSKGNIRNYEMVDGGVAANNPTLAAMTHVTKEMSILRHRSELLKIKPMETE 258

Query: 181 RMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIYNGGSTPIIDIFSDASCDMVDYHISSIF 240
           RML+LSLGTG PKNDEKYSAA +SKWGML W+Y+GG TPI+DIFSDAS DMVDYHISSIF
Sbjct: 259 RMLVLSLGTGTPKNDEKYSAAKASKWGMLDWVYHGGGTPIVDIFSDASADMVDYHISSIF 318

Query: 241 QCEQHHTNYLRIQDDTLTSDVSSVDIATRENLLKLVEVGERLLKKPLSRVNLESGKFEPL 300
           Q +  H NYLRIQDDTL+ +VSSVDIAT ENLL L+ VGE LLKKPLSRVNLESGKFEPL
Sbjct: 319 QSDHCHKNYLRIQDDTLSGEVSSVDIATEENLLNLIYVGENLLKKPLSRVNLESGKFEPL 378

Query: 301 DGEGTNEEALAEFAKMLSEERKLRLSP 328
           D +GTNE+ALAEFAKMLS ERKLRLSP
Sbjct: 379 DAKGTNEQALAEFAKMLSNERKLRLSP 405

[Close]
BLAST of Carg20941-RA vs. TrEMBL
Match: tr|A0A0A0LM20|A0A0A0LM20_CUCSA (Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G294910 PE=3 SV=1)

HSP 1 Score: 476.9 bits (1226), Expect = 3.7e-131
Identity = 237/294 (80.61%), Postives = 264/294 (89.80%), Query Frame = 0 

Query: 34  NHFLSSVVNLFGKVMGPKYDGKYLRRLIKDLLGDIRLKQTLTQIIIPAFDIKLLQPVIFT 93
           ++FL S+VN FGKVMGPKY+G YLR LIK LLGDI LKQTL+Q++IPAFDIKLLQPVIFT
Sbjct: 8   SYFLCSLVNFFGKVMGPKYNGLYLRSLIKGLLGDITLKQTLSQVVIPAFDIKLLQPVIFT 67

Query: 94  TIDAKWDELKNPKLADVCISTSAAPTFLPGHAFETMDSNGNVRKFDMVDGGVAANNPTLA 153
           TI+AK  ELKNPKLADVCISTSAAPTFLPG+ F+T DS GN+R ++MVDGGVAANNPTLA
Sbjct: 68  TIEAKCSELKNPKLADVCISTSAAPTFLPGYEFQTKDSKGNIRNYEMVDGGVAANNPTLA 127

Query: 154 AITHVTKEMSILRQRSELMKIKPMEAKRMLILSLGTGAPKNDEKYSAAVSSKWGMLGWIY 213
           A+THVTKEMSILR RSEL+KIKPME +RML+LSLGTG PKNDEKYSAA +SKWGML W+Y
Sbjct: 128 AMTHVTKEMSILRHRSELLKIKPMETERMLVLSLGTGTPKNDEKYSAAKASKWGMLDWVY 187

Query: 214 NGGSTPIIDIFSDASCDMVDYHISSIFQCEQHHTNYLRIQDDTLTSDVSSVDIATRENLL 273
           +GG TPI+DIFSDAS DMVDYHISSIFQ +  H NYLRIQDDTL+ +VSSVDIAT ENLL
Sbjct: 188 HGGGTPIVDIFSDASADMVDYHISSIFQSDHCHKNYLRIQDDTLSGEVSSVDIATEENLL 247

Query: 274 KLVEVGERLLKKPLSRVNLESGKFEPLDGEGTNEEALAEFAKMLSEERKLRLSP 328
            L+ VGE LLKKPLSRVNLESGKFEPLD +GTNE+ALAEFAKMLS ERKLRLSP
Sbjct: 248 NLIYVGENLLKKPLSRVNLESGKFEPLDAKGTNEQALAEFAKMLSNERKLRLSP 301

The following BLAST results are available for this feature:
BLAST of Carg20941-RA vs. NCBI nr
Match NameE-valueIdentityDescription
XP_022928076.14.9e-183100.00patatin-like protein 2 isoform X1 [Cucurbita moschata][more]
XP_022928077.14.9e-183100.00patatin-like protein 3 isoform X2 [Cucurbita moschata][more]
XP_023513150.12.7e-18198.78patatin-like protein 3 [Cucurbita pepo subsp. pepo][more]
XP_008457873.11.0e-15684.71PREDICTED: patatin-like protein 2 isoform X2 [Cucumis melo][more]
XP_011649366.12.3e-15685.32PREDICTED: patatin-like protein 2 [Cucumis sativus][more]
BLAST of Carg20941-RA vs. TAIR10
Match NameE-valueIdentityDescription
AT4G37050.15.7e-9352.10PATATIN-like protein 4[more]
AT2G26560.14.5e-9053.09phospholipase A 2A[more]
AT4G37070.21.0e-8949.69Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein[more]
AT4G37060.23.9e-8647.22PATATIN-like protein 5[more]
AT5G43590.16.8e-7042.94Acyl transferase/acyl hydrolase/lysophospholipase superfamily protein[more]
BLAST of Carg20941-RA vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|O23181|PLP3_ARATH1.0e-9152.10Patatin-like protein 3 OS=Arabidopsis thaliana OX=3702 GN=PLP3 PE=2 SV=2[more]
sp|A2YW91|PLP2_ORYSI4.3e-9050.46Patatin-like protein 2 OS=Oryza sativa subsp. indica OX=39946 GN=PLP2 PE=3 SV=1[more]
sp|Q6ZJD3|PLP2_ORYSJ4.3e-9050.46Patatin-like protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=PLP2 PE=3 SV=... [more]
sp|O48723|PLP2_ARATH8.1e-8953.09Patatin-like protein 2 OS=Arabidopsis thaliana OX=3702 GN=PLP2 PE=1 SV=1[more]
sp|O23179|PLP1_ARATH1.8e-8849.69Patatin-like protein 1 OS=Arabidopsis thaliana OX=3702 GN=PLP1 PE=1 SV=2[more]
BLAST of Carg20941-RA vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A1S3C761|A0A1S3C761_CUCME6.8e-15784.71Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1[more]
tr|A0A1S4E1P9|A0A1S4E1P9_CUCME1.7e-15584.45Patatin OS=Cucumis melo OX=3656 GN=LOC103497453 PE=3 SV=1[more]
tr|A0A1S3C6I1|A0A1S3C6I1_CUCME1.5e-15184.10Patatin OS=Cucumis melo OX=3656 GN=LOC103497452 PE=3 SV=1[more]
tr|O23784|O23784_CUCSA1.4e-14981.35Patatin (Fragment) OS=Cucumis sativus OX=3659 PE=2 SV=1[more]
tr|A0A0A0LM20|A0A0A0LM20_CUCSA3.7e-13180.61Patatin OS=Cucumis sativus OX=3659 GN=Csa_2G294910 PE=3 SV=1[more]
Annotated Terms
The following terms have been associated with this mRNA:
Vocabulary: Biological Process
TermDefinition
GO:0008152metabolic process
GO:0006629lipid metabolic process
Vocabulary: INTERPRO
TermDefinition
IPR016035Acyl_Trfase/lysoPLipase
IPR002641PNPLA_dom
GO Annotation
GO Assignments
This mRNA is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0006629 lipid metabolic process
biological_process GO:0008152 metabolic process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

This mRNA is a part of the following gene feature(s):

Feature NameUnique NameType
Carg20941Carg20941gene


The following polypeptide feature(s) derives from this mRNA:

Feature NameUnique NameType
Carg20941-RACarg20941-RA-proteinpolypeptide


The following exon feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg20941-RA.exon.1Carg20941-RA.exon.1exon
Carg20941-RA.exon.2Carg20941-RA.exon.2exon
Carg20941-RA.exon.3Carg20941-RA.exon.3exon
Carg20941-RA.exon.4Carg20941-RA.exon.4exon
Carg20941-RA.exon.5Carg20941-RA.exon.5exon


The following five_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg20941-RA.five_prime_UTR.1Carg20941-RA.five_prime_UTR.1five_prime_UTR


The following CDS feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg20941-RA.CDS.1Carg20941-RA.CDS.1CDS
Carg20941-RA.CDS.2Carg20941-RA.CDS.2CDS
Carg20941-RA.CDS.3Carg20941-RA.CDS.3CDS
Carg20941-RA.CDS.4Carg20941-RA.CDS.4CDS
Carg20941-RA.CDS.5Carg20941-RA.CDS.5CDS


The following three_prime_UTR feature(s) are a part of this mRNA:

Feature NameUnique NameType
Carg20941-RA.three_prime_UTR.1Carg20941-RA.three_prime_UTR.1three_prime_UTR


InterPro
Analysis Name: InterPro Annotations of silver-seed gourd
Date Performed: 2019-03-07
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR002641Patatin-like phospholipase domainPFAMPF01734Patatincoord: 50..155
e-value: 1.2E-7
score: 32.0
IPR002641Patatin-like phospholipase domainPROSITEPS51635PNPLAcoord: 1..155
score: 21.071
NoneNo IPR availableGENE3DG3DSA:3.40.1090.10coord: 1..327
e-value: 1.7E-108
score: 365.0
NoneNo IPR availablePANTHERPTHR32176:SF6PATATIN-LIKE PROTEIN 1-RELATEDcoord: 1..324
NoneNo IPR availablePANTHERPTHR32176FAMILY NOT NAMEDcoord: 1..324
IPR016035Acyl transferase/acyl hydrolase/lysophospholipaseSUPERFAMILYSSF52151FabD/lysophospholipase-likecoord: 1..293