CsaV3_UNG066540 (gene) Cucumber (Chinese Long) v3

Overview
NameCsaV3_UNG066540
Typegene
OrganismCucumis sativus (Cucumber (Chinese Long) v3)
DescriptionAcyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase
Locationscaffold72 : 176309 .. 176575 (+)
Genome Viewer
Sequences
The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS
Hold the cursor over a type above to highlight its positions in the sequence below.
ATCATTGGCTTGAGATCTGCATACAGGAAGATATTCATGTCTACTGATGCAAATTCTGAAGGGTTGGAAGAACGTCTCAACGAAGTGGTATTGCATATCAAATTCGACCCCTCAGTCTCATACAGACATACAACCTAAAGTTCGTTTCATTTTTGCAGGAACAGCATGAAAAATTGGCTCACATATCTTCAGTTCGTTCCATGATTCAGTCAATTCGTGCATCATTTGAACAAAATCGTCGGGGCATATGCAAATTCAGACTATGGA

mRNA sequence

ATCATTGGCTTGAGATCTGCATACAGGAAGATATTCATGTCTACTGATGCAAATTCTGAAGGGTTGGAAGAACGTCTCAACGAAGTGGAACAGCATGAAAAATTGGCTCACATATCTTCAGTTCGTTCCATGATTCAGTCAATTCGTGCATCATTTGAACAAAATCGTCGGGGCATATGCAAATTCAGACTATGGA

Coding sequence (CDS)

ATCATTGGCTTGAGATCTGCATACAGGAAGATATTCATGTCTACTGATGCAAATTCTGAAGGGTTGGAAGAACGTCTCAACGAAGTGGAACAGCATGAAAAATTGGCTCACATATCTTCAGTTCGTTCCATGATTCAGTCAATTCGTGCATCATTTGAACAAAATCGTCGGGGCATATGCAAATTCAGACTATGGA

Protein sequence

IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGICKFRLWX
Homology
[Close]
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match: KGN66222.1 (hypothetical protein Csa_1G586840 [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 3.4e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC
Sbjct: 322 IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 381

Query: 61  KFRLW 66
           KFRLW
Sbjct: 382 KFRLW 386

[Close]
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match: XP_011659972.1 (PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial [Cucumis sativus] >XP_004135815.2 PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial [Cucumis sativus] >XP_011659973.1 PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial [Cucumis sativus] >XP_011659975.1 PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial [Cucumis sativus])

HSP 1 Score: 129.8 bits (325), Expect = 3.4e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC
Sbjct: 267 IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 326

Query: 61  KFRLW 66
           KFRLW
Sbjct: 327 KFRLW 331

[Close]
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match: XP_008450839.1 (PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 [Cucumis melo] >XP_008450840.1 PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 [Cucumis melo] >XP_016900933.1 PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMS DANSEGLEERLNEVEQHEKLA ISSVRSMIQSIRASFEQNRRGIC
Sbjct: 267 IIGLRSAYRKIFMSADANSEGLEERLNEVEQHEKLARISSVRSMIQSIRASFEQNRRGIC 326

Query: 61  KFRLW 66
           KFRLW
Sbjct: 327 KFRLW 331

[Close]
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match: XP_016900934.1 (PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X2 [Cucumis melo])

HSP 1 Score: 124.8 bits (312), Expect = 1.1e-25
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMS DANSEGLEERLNEVEQHEKLA ISSVRSMIQSIRASFEQNRRGIC
Sbjct: 238 IIGLRSAYRKIFMSADANSEGLEERLNEVEQHEKLARISSVRSMIQSIRASFEQNRRGIC 297

Query: 61  KFRLW 66
           KFRLW
Sbjct: 298 KFRLW 302

[Close]
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match: XP_022147531.1 (probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X2 [Momordica charantia])

HSP 1 Score: 111.3 bits (277), Expect = 1.3e-21
Identity = 56/65 (86.15%), Postives = 58/65 (89.23%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           I GLRSAYRK+FM TDANS+GLEERL EVEQHEKLAHI  V SMIQSIRASFEQNRRGIC
Sbjct: 263 INGLRSAYRKVFMPTDANSKGLEERLEEVEQHEKLAHIPPVCSMIQSIRASFEQNRRGIC 322

Query: 61  KFRLW 66
           KFR W
Sbjct: 323 KFRPW 327

[Close]
BLAST of CsaV3_UNG066540 vs. TAIR10
Match: AT4G29540.2 (bacterial transferase hexapeptide repeat-containing protein)

HSP 1 Score: 76.6 bits (187), Expect = 6.2e-15
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 0 

Query: 4   LRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGICKFR 63
           LR+AYRKIFMST+  S   EERL E+EQ ++L  + +V +M+QSIR SF ++RRGICKFR
Sbjct: 270 LRAAYRKIFMSTETVSLSFEERLTELEQDQELYSVPAVSAMLQSIRDSFTESRRGICKFR 329

Query: 64  LW 66
            W
Sbjct: 330 QW 331

[Close]
BLAST of CsaV3_UNG066540 vs. Swiss-Prot
Match: sp|Q9SU91|LPXA_ARATH (Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial OS=Arabidopsis thaliana OX=3702 GN=LPXA PE=1 SV=1)

HSP 1 Score: 76.6 bits (187), Expect = 1.1e-13
Identity = 37/62 (59.68%), Postives = 48/62 (77.42%), Query Frame = 0 

Query: 4   LRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGICKFR 63
           LR+AYRKIFMST+  S   EERL E+EQ ++L  + +V +M+QSIR SF ++RRGICKFR
Sbjct: 270 LRAAYRKIFMSTETVSLSFEERLTELEQDQELYSVPAVSAMLQSIRDSFTESRRGICKFR 329

Query: 64  LW 66
            W
Sbjct: 330 QW 331

[Close]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match: tr|A0A0A0LZD2|A0A0A0LZD2_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586840 PE=4 SV=1)

HSP 1 Score: 129.8 bits (325), Expect = 2.3e-27
Identity = 65/65 (100.00%), Postives = 65/65 (100.00%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC
Sbjct: 322 IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 381

Query: 61  KFRLW 66
           KFRLW
Sbjct: 382 KFRLW 386

[Close]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match: tr|A0A1S4DY83|A0A1S4DY83_CUCME (probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X1 OS=Cucumis melo OX=3656 GN=LOC103492309 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-26
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMS DANSEGLEERLNEVEQHEKLA ISSVRSMIQSIRASFEQNRRGIC
Sbjct: 267 IIGLRSAYRKIFMSADANSEGLEERLNEVEQHEKLARISSVRSMIQSIRASFEQNRRGIC 326

Query: 61  KFRLW 66
           KFRLW
Sbjct: 327 KFRLW 331

[Close]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match: tr|A0A1S4DY72|A0A1S4DY72_CUCME (probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase, mitochondrial isoform X2 OS=Cucumis melo OX=3656 GN=LOC103492309 PE=4 SV=1)

HSP 1 Score: 124.8 bits (312), Expect = 7.3e-26
Identity = 63/65 (96.92%), Postives = 63/65 (96.92%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           IIGLRSAYRKIFMS DANSEGLEERLNEVEQHEKLA ISSVRSMIQSIRASFEQNRRGIC
Sbjct: 238 IIGLRSAYRKIFMSADANSEGLEERLNEVEQHEKLARISSVRSMIQSIRASFEQNRRGIC 297

Query: 61  KFRLW 66
           KFRLW
Sbjct: 298 KFRLW 302

[Close]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match: tr|K7L1E6|K7L1E6_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_07G128800 PE=4 SV=1)

HSP 1 Score: 92.0 bits (227), Expect = 5.2e-16
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           I  +R+AYRKIFM  DAN+  LEERL EVEQHE+L H+ +VR+M+QSIR SF +NRRGIC
Sbjct: 273 IKSMRTAYRKIFMCVDANAGSLEERLAEVEQHEELVHVPAVRAMLQSIRNSFAENRRGIC 332

Query: 61  KFRLW 66
           +FR W
Sbjct: 333 RFRQW 337

[Close]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match: tr|A0A0R0LE95|A0A0R0LE95_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100788388 PE=4 SV=1)

HSP 1 Score: 91.7 bits (226), Expect = 6.8e-16
Identity = 43/65 (66.15%), Postives = 53/65 (81.54%), Query Frame = 0 

Query: 1   IIGLRSAYRKIFMSTDANSEGLEERLNEVEQHEKLAHISSVRSMIQSIRASFEQNRRGIC 60
           I  +R+AYRKIFM  DAN+  LEERL EVEQHE+L H+ ++R+M+QSIR SF +NRRGIC
Sbjct: 107 IRSMRAAYRKIFMCVDANAVSLEERLAEVEQHEELVHVPAMRAMLQSIRNSFAENRRGIC 166

Query: 61  KFRLW 66
           KFR W
Sbjct: 167 KFRHW 171

The following BLAST results are available for this feature:
BLAST of CsaV3_UNG066540 vs. NCBI nr
Match NameE-valueIdentityDescription
KGN66222.13.4e-27100.00hypothetical protein Csa_1G586840 [Cucumis sativus][more]
XP_011659972.13.4e-27100.00PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acylt... [more]
XP_008450839.11.1e-2596.92PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acylt... [more]
XP_016900934.11.1e-2596.92PREDICTED: probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acylt... [more]
XP_022147531.11.3e-2186.15probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase,... [more]
BLAST of CsaV3_UNG066540 vs. TAIR10
Match NameE-valueIdentityDescription
AT4G29540.26.2e-1559.68bacterial transferase hexapeptide repeat-containing protein[more]
BLAST of CsaV3_UNG066540 vs. Swiss-Prot
Match NameE-valueIdentityDescription
sp|Q9SU91|LPXA_ARATH1.1e-1359.68Probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase,... [more]
BLAST of CsaV3_UNG066540 vs. TrEMBL
Match NameE-valueIdentityDescription
tr|A0A0A0LZD2|A0A0A0LZD2_CUCSA2.3e-27100.00Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G586840 PE=4 SV=1[more]
tr|A0A1S4DY83|A0A1S4DY83_CUCME7.3e-2696.92probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase,... [more]
tr|A0A1S4DY72|A0A1S4DY72_CUCME7.3e-2696.92probable acyl-[acyl-carrier-protein]--UDP-N-acetylglucosamine O-acyltransferase,... [more]
tr|K7L1E6|K7L1E6_SOYBN5.2e-1666.15Uncharacterized protein OS=Glycine max OX=3847 GN=GLYMA_07G128800 PE=4 SV=1[more]
tr|A0A0R0LE95|A0A0R0LE95_SOYBN6.8e-1666.15Uncharacterized protein OS=Glycine max OX=3847 GN=100788388 PE=4 SV=1[more]
Annotated Terms
The following terms have been associated with this gene:
Vocabulary: INTERPRO
TermDefinition
IPR037157Acetyltransf_C_sf
GO Annotation
GO Assignments
This gene is annotated with the following GO terms.
Category Term Accession Term Name
biological_process GO:0008150 biological_process
cellular_component GO:0005575 cellular_component
molecular_function GO:0003674 molecular_function
Relationships

The following mRNA feature(s) are a part of this gene:

Feature NameUnique NameType
CsaV3_UNG066540.1CsaV3_UNG066540.1mRNA


InterPro
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
IPR TermIPR DescriptionSourceSource TermSource DescriptionAlignment
IPR037157UDP-N-acetylglucosamine O-acyltransferase, C-terminal domain superfamilyGENE3DG3DSA:1.20.1180.10coord: 1..66
e-value: 1.2E-28
score: 101.0

Synteny
The following gene(s) are orthologous to this gene:

None

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:
GeneOrganismBlock
CsaV3_UNG066540Cucumber (Gy14) v2cgybcucB036
CsaV3_UNG066540Cucumber (Gy14) v1cgycucB602
CsaV3_UNG066540Cucurbita pepo (Zucchini)cpecucB0462
CsaV3_UNG066540Wild cucumber (PI 183967)cpicucB041
CsaV3_UNG066540Melon (DHL92) v3.5.1cucmeB349
CsaV3_UNG066540Melon (DHL92) v3.6.1cucmedB341
CsaV3_UNG066540Watermelon (Charleston Gray)cucwcgB359
CsaV3_UNG066540Watermelon (97103) v2cucwmbB350
CsaV3_UNG066540Wax gourdcucwgoB441
CsaV3_UNG066540Cucumber (Chinese Long) v3cuccucB033
CsaV3_UNG066540Silver-seed gourdcarcucB0112