CsaV3_UNG208550 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: polypeptideexonCDS Hold the cursor over a type above to highlight its positions in the sequence below.ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGGTTTTTCCGTACCAGCTTCTTCTACCTATACCGCAGTGGAAGCACCTAAAGGTGAATTTGGTGTCTTTCTGGTCAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGTAGATAGATAGGACTACTAGTTGCTCGATCAGGGCCAACGCTTTATTGCGAGCCAAAAACCTCAGCGGATCCTATAAAGAGAAAGCAGCCTAGTGGAAGAGGTTAATATTGAAAAAGAAAGAATCTCATCTTGACTCAATGAATTCAGCCTAGATCAGTTCGCAATATTCTTTGCGCCTTATAATTGTTCTTTGCGCCTAGCCTTCGGACCTGTCTTATGGGGCCTTCGTAGCTTAATAATGGGGATCTGGACGTAGTATGAATCTCGCAAGTCAAATTCTCTAATGGATAGGCCTCACGCAAACCGTAATATTCTGCCCCGTCCTCAGTCGCAGGTTAATATGGATAGTCCTTCGGACCTGTGACGCCTTCGGACTGGAGCTTTATTTTTCATTAAGAAAAAGGACCAGTCCTCCGGACGGGAAGATCAATGAACGAGTCAATGAACAAAGAACAAAGAATTTGAGAGAAAGTGAAAGATTGAACCTTTACCCTCGCGGGTACATAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGGTATGACGGGGTCTAAGCTAAGCCGGGAACATCACTCGCCCAGAGGTTTAGGCTCAAAGAATTATCGATAGGCTTTATGGAACCGCAAAATTAACTGGGAGTCTTCCCTCAAATCCTTTGAGCCTTGTTTTGTCTTCTTTCTCTTTCTTCAGTCCTTCTCTCGCAATATTCTTTGCGCCTTGCTTTCCTTGATAGCTGCTAGCCTAAAAGGTAATGAAGTTGGAAGGAACTCGACGGAGTTGACGAAGTTGAGATCAGAAGCTCGCCAGCCCTGAATTCTCATTAATAGAAGGGATTCACTGGATGAAAGTGTGACGAGAGTCAGACGTGAAGAACTGCTCTGTCTAAGTTAGCGCGTAGTGGGGATTTCTCAGTCCGTTCGGAAGCTACTGTAGGAGTTCCAGAGATTGACCGATACTGGGAAGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACGTACGGATTGAATTGAACTCGACTCTCAGATAGAGGCGTCTTGCCCAAATTCCCCATGAAATGAGAGAGAACTTCTCCTTCCCCATAAAGGGAAAATGTCCTGATTTTAGGCTTTTCTTCTATTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAGTAATGATATTTGTCGAAGATTCCTTTCTCAAATTCTTTCTCATATTTCTAAATATTAGTGGAAGGCAATCGCATCGCAAATTCTTTGCGCCTCCAATTCCCCGTCACCTGTCCATCAAAGAAAGGTCCAGGTGATTTATCCGTAGTCCGGAGGACTTTCCGTAATTAACCGAACTTTGCGCCTAGCCTTCGGACCTGTCTTATGGCACCGCTACGTGGGGTCTGAAACTGCTTTATAAAGGATCATGACTCTTTGAATTTCATGGATAAACAAGTCCGGAGGACGGGGTCCAGATGCGCGAAGCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCGTGGGGGAGTCAGAAACCGCATCTTTGCAAATATGAAGGCGCGAAGCGAAGCGCATGAATTAAAGAGAGAAAGATAGGCTGAATTCATTGAGTGAAACCTATTCAAACCGTCGTCAGGACCCTTATTTCCATTATTTTGATATCTCCGAAAGTCAGGCAATATCCATATTCAGTGGAATTCAATATTCTTTCAGTTCCATCAAAGAAAGGTCCAGGGTCCTACGTGCCAAAGAAAGGTCCAGGGTCCGGAGTCCGCAGGGCCAAAGAAAGGTCCAGGTGATTTATCCGTAGGACCATCCGTAATTAACAGAAGTAGGACCATCCATATGGAAGGAAGGACTCTAAAACGGAGTGGGCAAATTTCATTGATCCATAGTCGCAGTGAATTGAGAGACCAGATCGATCCAATTCCGACCTGTGAAATCGTCTTGCGCCATATGTACTGAGATTGTTCGGGAGACATGGCGAAAAAAGAAGAAAGTTTTCAGTTCCGTGGCCTATTCATTTCATTAGCATTTTTTTGAGGATTCCAGCCCGAGAAGAACGAGAAGAAAATGTATGGGAAAATCATATGCAAAATATATCATAATTATTGCCCATTATTCTTTCTTCTTTAGAAAGATCCGAAGGCCAAATTTTCGGAATAGGCGGTCTCTGACTTTCCTTTTTCGTACTAATCCTTATATCAAAGATCTTTCAAAAATCTCAAAAAATCTTTTCAAAGGAAGGGCTTCCTTTTTCTTGTTCTTTCTTTCCTCATTCTCTCCTTGACCTCCATAGTCCTCTACTTAATACGACAAAATCTCACTACTCTTTTTTTCTAGTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA ATGGGAAACTACCACGTTAGGTTTGGAGAGAGATGGGACCGGCAAGACCCAGCCAGATGCAAGCTTTTTCTTTCAATAGCCGGCCAAATGACTAAGAGGATCATCATCGGTCTACTCTACCTCAATTCACCATTTCGAACTTTATACAGAAGTAATGGAAGCAATCGTCCCTACCGTCGTAAAATAAGAGCACCTGGCTCTGCCCATTCACAAGGACTCGATTCTATGTCCAAACATCACATGCCAGCGGATGTGGTCACCATCATAGGTACTCAAGATATTGTGTCTGGAGAGGAGGTTCGGGTAAGACCTCACCCAGACTGTCTCAGTTTCACCATCACGAGGACGAAAGAGTACAAACCCACCATTCCCACGGGGCGATCTTCAGAGACGCCCACTGCACCTGGGAATCTTTCTCTTGACTTCAAGGCCCAGCCCTTCATGAAAGGCCAGCCCTTCATTAGTCAAGGGAATGAGAAGGCCCACGGAGCGGTATACCAGCGGGAGCGGGGGATAAGTGGAATTCCCCCATTCAAGGAAGAAGATGGGAATCGAGTGAGGATCTCTTCTCGCTGTGCTCGCATAGCTCTTGGTCTTCTGGTTACGGGCTATTCATTTTTGATGAAAGAAGTAGGATCACCGAAGCGACTGGAAGGCGCAAAGAATATTGCGTTGATGAGTGCAAGGCTTCAAGATTTTTCTACCGCACCTATTTTTGTATTAACCACGGGCGGCTTGGTTCTCACCACTTGTTCTTTTGTTGATGATCCATCCGCTTCTTCGGAGGATTCCTTCGACCTCCAGGTCCTCTCGGAGCCTTGGCCCGTAACTCCAAATAGCGCGGAAGAAACCTCTCTTTTTAATAGAATCAGACGATTAGAAAGAGAGGATTGTATCTTTCTGCTGGGAAGGGGTCCAGGTCTATTCTGGAGGGAATCTGTGAAGAGGACTCTTGATTCTTATACAACTCAGGAGGACTACGATTTCTTCCTCGAGTTCTCAAAGAGAGATCTGGAGATCCGGGAGCTGAGACACTCCTGTTATCAAAAGTTTTTTGAACTTCTTAATGAGAACCCTGACCTCGTGGAGAAAGCCCCCTGCGATCCAAAGAATTGCCTTATCCATTTCTTGGAAGAGAAGCGCGGCGAGCTGGACTCCTTTACGGAGTTGAGCGTCAAAAAAAGAGACAGAGAAGAAATCGAATTTCTAGAAGTGGAGAAAAATTGTTTTTGA MGNYHVRFGERWDRQDPARCKLFLSIAGQMTKRIIIGLLYLNSPFRTLYRSNGSNRPYRRKIRAPGSAHSQGLDSMSKHHMPADVVTIIGTQDIVSGEEVRVRPHPDCLSFTITRTKEYKPTIPTGRSSETPTAPGNLSLDFKAQPFMKGQPFISQGNEKAHGAVYQRERGISGIPPFKEEDGNRVRISSRCARIALGLLVTGYSFLMKEVGSPKRLEGAKNIALMSARLQDFSTAPIFVLTTGGLVLTTCSFVDDPSASSEDSFDLQVLSEPWPVTPNSAEETSLFNRIRRLEREDCIFLLGRGPGLFWRESVKRTLDSYTTQEDYDFFLEFSKRDLEIRELRHSCYQKFFELLNENPDLVEKAPCDPKNCLIHFLEEKRGELDSFTELSVKKRDREEIEFLEVEKNCF
BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: AEN56122.1 (putative ATP synthase F1 subunit 1 (mitochondrion) [Cucumis melo subsp. melo]) HSP 1 Score: 184.5 bits (467), Expect = 7.3e-43 Identity = 93/161 (57.76%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_017985372.1 (PREDICTED: uncharacterized mitochondrial protein AtMg01280-like [Theobroma cacao]) HSP 1 Score: 139.0 bits (349), Expect = 3.5e-29 Identity = 74/148 (50.00%), Postives = 101/148 (68.24%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_018628934.1 (PREDICTED: uncharacterized protein LOC108946483 [Nicotiana tomentosiformis]) HSP 1 Score: 134.4 bits (337), Expect = 8.6e-28 Identity = 77/124 (62.10%), Postives = 81/124 (65.32%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: XP_016435338.1 (PREDICTED: NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like [Nicotiana tabacum]) HSP 1 Score: 134.0 bits (336), Expect = 1.1e-27 Identity = 75/124 (60.48%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. NCBI nr
Match: AMR36233.1 (hypothetical protein (mitochondrion) [Nicotiana undulata] >AMR36235.1 hypothetical protein (mitochondrion) [Nicotiana tabacum] >AMR36237.1 hypothetical protein (mitochondrion) [Nicotiana tabacum]) HSP 1 Score: 133.3 bits (334), Expect = 1.9e-27 Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TAIR10
Match: ATMG01280.1 (Cytochrome C oxidase subunit II-like, transmembrane domain) HSP 1 Score: 118.2 bits (295), Expect = 1.2e-26 Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TAIR10
Match: AT2G07695.1 (Cytochrome C oxidase subunit II-like, transmembrane domain) HSP 1 Score: 117.9 bits (294), Expect = 1.5e-26 Identity = 69/153 (45.10%), Postives = 94/153 (61.44%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TAIR10
Match: ATMG00510.1 (NADH dehydrogenase subunit 7) HSP 1 Score: 97.8 bits (242), Expect = 1.6e-20 Identity = 47/48 (97.92%), Postives = 47/48 (97.92%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|P92559|M1280_ARATH (Uncharacterized mitochondrial protein AtMg01280 OS=Arabidopsis thaliana OX=3702 GN=AtMg01280 PE=3 SV=1) HSP 1 Score: 118.2 bits (295), Expect = 2.1e-25 Identity = 69/153 (45.10%), Postives = 95/153 (62.09%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q36450|NDUS2_NICSY (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nicotiana sylvestris OX=4096 GN=NAD7 PE=2 SV=1) HSP 1 Score: 94.4 bits (233), Expect = 3.2e-18 Identity = 46/48 (95.83%), Postives = 46/48 (95.83%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|P93306|NDUS2_ARATH (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Arabidopsis thaliana OX=3702 GN=NAD7 PE=1 SV=2) HSP 1 Score: 84.0 bits (206), Expect = 4.4e-15 Identity = 42/48 (87.50%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q9TC96|NDUS2_NEPOL (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2 OS=Nephroselmis olivacea OX=31312 GN=NAD7 PE=3 SV=1) HSP 1 Score: 78.6 bits (192), Expect = 1.8e-13 Identity = 39/48 (81.25%), Postives = 41/48 (85.42%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. Swiss-Prot
Match: sp|Q37619|NDUS2_PROWI (NADH-ubiquinone oxidoreductase 49 kDa subunit OS=Prototheca wickerhamii OX=3111 GN=NAD7 PE=3 SV=1) HSP 1 Score: 74.7 bits (182), Expect = 2.7e-12 Identity = 36/48 (75.00%), Postives = 42/48 (87.50%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|G3EU37|G3EU37_CUCME (Putative ATP synthase F1 subunit 1 OS=Cucumis melo subsp. melo OX=412675 GN=atp1 PE=4 SV=1) HSP 1 Score: 184.5 bits (467), Expect = 4.8e-43 Identity = 93/161 (57.76%), Postives = 117/161 (72.67%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A1S3X6J4|A0A1S3X6J4_TOBAC (NADH dehydrogenase [ubiquinone] iron-sulfur protein 2-like OS=Nicotiana tabacum OX=4097 GN=LOC107761612 PE=4 SV=1) HSP 1 Score: 134.0 bits (336), Expect = 7.5e-28 Identity = 75/124 (60.48%), Postives = 79/124 (63.71%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A142I104|A0A142I104_TOBAC (Uncharacterized protein OS=Nicotiana tabacum OX=4097 GN=orf293 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27 Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A142I102|A0A142I102_9SOLA (Uncharacterized protein OS=Nicotiana undulata OX=118713 GN=orf293 PE=4 SV=1) HSP 1 Score: 133.3 bits (334), Expect = 1.3e-27 Identity = 88/221 (39.82%), Postives = 118/221 (53.39%), Query Frame = 0
BLAST of CsaV3_UNG208550 vs. TrEMBL
Match: tr|A0A075VWM9|A0A075VWM9_CAPAN (Uncharacterized protein OS=Capsicum annuum OX=4072 GN=orf279 PE=4 SV=1) HSP 1 Score: 132.5 bits (332), Expect = 2.2e-27 Identity = 73/146 (50.00%), Postives = 94/146 (64.38%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: None |