CsaV3_7G029050.1 (mRNA) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TAAGAATTTCCGCCATTAATCACTTTAAAACCCATCTCTTTGTTCAAACCCATCTCCATTTCTAATCACTTTCTACAATTCAATCCCTCTTCAAGATTAATTCAATGGCCAGCATCAAAGTCTATGGACTCGCCCTTTCCACACCCACATGCAAGGTTCTAGCTTGTCTCTACGAGAAAGACCTCGAATTCGAGTTTATCAATGTCAAATTGCACGAAGGCGAACATAAGAAACACCCTTTTCTCTCCATCAATGTAAATTTTGCCTTAGCTTGCTTTAATTTTCATGGGTTGTTCTTGATTTCATTTTGTTGGATTGTAGCCTTTTGGTCAAATTCCTGGATTCCAAGATGGGGATTTAACACTTTTTGGTAAATTTTCAAACCAATTCTCTTCTCATGATAAGTGTTTGTGATTATGCAACACAAGGTTTCTGATAAATTGTCTGTGTACAGAATCTAGAGCAATCACACAATACATCTCCGCAAATTATACTAATAATGGAACCCAATTGATTCCCCAAGACTGCAAAGAAGCAGCTGCATTATTAACATGGATTGAAGTGGAGAGTCATCATTTTAATCCACCAGCCTCTAAACTTGTGTATGAGATATATTTAAAGCCAAAGCTTGGATGGGGTGAGACAGATGGTGCAGTGGTTGAGGAAAAGGAAGCCGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAGGTTGGCTGAATCCAAGTACTTGGCTGGGGAAGCCTTCAGTTTGGCTGATCTTCACCATATTCCAACGTTAGGGTTCTTGTTGGAGACGCAAACCAAGAAATTGTTTGAAGCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGCAAGTAATATGGATGGTTTTGACTTTGCAGATAAGCCTTCACTATATCATGAAAGCTTTAAATATATATCTAAATGTTGTGTGTGATTGTCTTTTGCTTTTTGTCTGTTGTAATAAGTTGGTTTGTGCAATTTGTTGTTCAATGTTTGGTTGATGCAACTTTTTGTAATGCTTAGGTGAGGTGTGTCACTTTACAATCCAATGGTCATGTATATTAGATACAAGCAGACAGTTAGACTCGGTTTATCGATCAAACCGCTACTAAATCGACTAGATTGGTTTAACAAATGTTCAAAACGACTCCAACCATGAAAGTGTGCAAACTCCAACCATGAAAGAGTGCAAACTCATTGTTGGTTGGTT ATGGCCAGCATCAAAGTCTATGGACTCGCCCTTTCCACACCCACATGCAAGCCTTTTGGTCAAATTCCTGGATTCCAAGATGGGGATTTAACACTTTTTGAATCTAGAGCAATCACACAATACATCTCCGCAAATTATACTAATAATGGAACCCAATTGATTCCCCAAGACTGCAAAGAAGCAGCTGCATTATTAACATGGATTGAAGTGGAGAGTCATCATTTTAATCCACCAGCCTCTAAACTTGTGTATGAGATATATTTAAAGCCAAAGCTTGGATGGGGTGAGACAGATGGTGCAGTGGTTGAGGAAAAGGAAGCCGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAGGTTGGCTGAATCCAAGTACTTGGCTGGGGAAGCCTTCAGTTTGGCTGATCTTCACCATATTCCAACGTTAGGGTTCTTGTTGGAGACGCAAACCAAGAAATTGTTTGAAGCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGCAAGTAA ATGGCCAGCATCAAAGTCTATGGACTCGCCCTTTCCACACCCACATGCAAGCCTTTTGGTCAAATTCCTGGATTCCAAGATGGGGATTTAACACTTTTTGAATCTAGAGCAATCACACAATACATCTCCGCAAATTATACTAATAATGGAACCCAATTGATTCCCCAAGACTGCAAAGAAGCAGCTGCATTATTAACATGGATTGAAGTGGAGAGTCATCATTTTAATCCACCAGCCTCTAAACTTGTGTATGAGATATATTTAAAGCCAAAGCTTGGATGGGGTGAGACAGATGGTGCAGTGGTTGAGGAAAAGGAAGCCGAGTTAGCCAAAGTTGTTGATATCTATGAGAAGAGGTTGGCTGAATCCAAGTACTTGGCTGGGGAAGCCTTCAGTTTGGCTGATCTTCACCATATTCCAACGTTAGGGTTCTTGTTGGAGACGCAAACCAAGAAATTGTTTGAAGCTCGGCCCCATGTCAATGCTTGGGTGGCTGATATCATGGCCAGGCCGGCTTGGGCTAAGGTGCTTGCTTTGCGCAAGTAA MASIKVYGLALSTPTCKPFGQIPGFQDGDLTLFESRAITQYISANYTNNGTQLIPQDCKEAAALLTWIEVESHHFNPPASKLVYEIYLKPKLGWGETDGAVVEEKEAELAKVVDIYEKRLAESKYLAGEAFSLADLHHIPTLGFLLETQTKKLFEARPHVNAWVADIMARPAWAKVLALRK
BLAST of CsaV3_7G029050.1 vs. NCBI nr
Match: XP_004136043.1 (PREDICTED: glutathione S-transferase PARB-like [Cucumis sativus] >KGN44914.1 hypothetical protein Csa_7G395810 [Cucumis sativus]) HSP 1 Score: 356.7 bits (914), Expect = 4.7e-95 Identity = 181/214 (84.58%), Postives = 181/214 (84.58%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. NCBI nr
Match: XP_008451607.1 (PREDICTED: glutathione S-transferase-like [Cucumis melo]) HSP 1 Score: 327.8 bits (839), Expect = 2.4e-86 Identity = 167/214 (78.04%), Postives = 174/214 (81.31%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. NCBI nr
Match: XP_022960088.1 (glutathione S-transferase PARB-like [Cucurbita moschata]) HSP 1 Score: 279.6 bits (714), Expect = 7.4e-72 Identity = 139/211 (65.88%), Postives = 157/211 (74.41%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. NCBI nr
Match: XP_023515239.1 (glutathione S-transferase PARB-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 279.3 bits (713), Expect = 9.6e-72 Identity = 139/211 (65.88%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. NCBI nr
Match: XP_023004652.1 (glutathione S-transferase PARB-like [Cucurbita maxima]) HSP 1 Score: 276.9 bits (707), Expect = 4.8e-71 Identity = 137/211 (64.93%), Postives = 156/211 (73.93%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TAIR10
Match: AT1G02920.1 (glutathione S-transferase 7) HSP 1 Score: 190.3 bits (482), Expect = 1.1e-48 Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TAIR10
Match: AT2G47730.1 (glutathione S-transferase phi 8) HSP 1 Score: 189.9 bits (481), Expect = 1.4e-48 Identity = 99/214 (46.26%), Postives = 133/214 (62.15%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TAIR10
Match: AT2G02930.1 (glutathione S-transferase F3) HSP 1 Score: 186.8 bits (473), Expect = 1.2e-47 Identity = 97/163 (59.51%), Postives = 115/163 (70.55%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TAIR10
Match: AT1G02930.1 (glutathione S-transferase 6) HSP 1 Score: 182.2 bits (461), Expect = 2.9e-46 Identity = 91/160 (56.88%), Postives = 117/160 (73.12%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TAIR10
Match: AT4G02520.1 (glutathione S-transferase PHI 2) HSP 1 Score: 181.0 bits (458), Expect = 6.5e-46 Identity = 94/162 (58.02%), Postives = 112/162 (69.14%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. Swiss-Prot
Match: sp|P46423|GSTF_HYOMU (Glutathione S-transferase OS=Hyoscyamus muticus OX=35626 PE=1 SV=1) HSP 1 Score: 204.1 bits (518), Expect = 1.3e-51 Identity = 93/167 (55.69%), Postives = 123/167 (73.65%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. Swiss-Prot
Match: sp|P30109|GSTF1_TOBAC (Glutathione S-transferase PARB OS=Nicotiana tabacum OX=4097 GN=PARB PE=2 SV=1) HSP 1 Score: 199.1 bits (505), Expect = 4.1e-50 Identity = 92/160 (57.50%), Postives = 124/160 (77.50%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. Swiss-Prot
Match: sp|P46440|GSTF2_TOBAC (Glutathione S-transferase APIC OS=Nicotiana tabacum OX=4097 GN=APIC PE=2 SV=1) HSP 1 Score: 195.3 bits (495), Expect = 6.0e-49 Identity = 92/160 (57.50%), Postives = 120/160 (75.00%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. Swiss-Prot
Match: sp|Q9SRY5|GSTF7_ARATH (Glutathione S-transferase F7 OS=Arabidopsis thaliana OX=3702 GN=GSTF7 PE=2 SV=3) HSP 1 Score: 190.3 bits (482), Expect = 1.9e-47 Identity = 94/160 (58.75%), Postives = 118/160 (73.75%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. Swiss-Prot
Match: sp|Q96266|GSTF8_ARATH (Glutathione S-transferase F8, chloroplastic OS=Arabidopsis thaliana OX=3702 GN=GSTF8 PE=1 SV=3) HSP 1 Score: 189.9 bits (481), Expect = 2.5e-47 Identity = 99/214 (46.26%), Postives = 133/214 (62.15%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TrEMBL
Match: tr|A0A0A0K7Q4|A0A0A0K7Q4_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G395810 PE=3 SV=1) HSP 1 Score: 356.7 bits (914), Expect = 3.1e-95 Identity = 181/214 (84.58%), Postives = 181/214 (84.58%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TrEMBL
Match: tr|A0A1S3BSQ0|A0A1S3BSQ0_CUCME (glutathione S-transferase-like OS=Cucumis melo OX=3656 GN=LOC103492840 PE=3 SV=1) HSP 1 Score: 327.8 bits (839), Expect = 1.6e-86 Identity = 167/214 (78.04%), Postives = 174/214 (81.31%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TrEMBL
Match: tr|A0A0A0K5B8|A0A0A0K5B8_CUCSA (Glutathione S-transferase OS=Cucumis sativus OX=3659 GN=Csa_7G395820 PE=3 SV=1) HSP 1 Score: 270.8 bits (691), Expect = 2.3e-69 Identity = 125/164 (76.22%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TrEMBL
Match: tr|A0A1S3BRV4|A0A1S3BRV4_CUCME (glutathione S-transferase-like OS=Cucumis melo OX=3656 GN=LOC103492839 PE=3 SV=1) HSP 1 Score: 270.0 bits (689), Expect = 3.9e-69 Identity = 125/164 (76.22%), Postives = 143/164 (87.20%), Query Frame = 0
BLAST of CsaV3_7G029050.1 vs. TrEMBL
Match: tr|Q8GT24|Q8GT24_CUCMA (Glutathione S-transferase OS=Cucurbita maxima OX=3661 GN=Pugf PE=2 SV=1) HSP 1 Score: 259.6 bits (662), Expect = 5.2e-66 Identity = 128/214 (59.81%), Postives = 153/214 (71.50%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this mRNA:
GO Assignments
This mRNA is annotated with the following GO terms.
This mRNA is a part of the following gene feature(s):
The following polypeptide feature(s) derives from this mRNA:
The following CDS feature(s) are a part of this mRNA:
The following exon feature(s) are a part of this mRNA:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
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