CsaV3_7G027060.1 (mRNA) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G027060.1
Type	mRNA
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	Inactive leucine-rich repeat receptor-like protein kinase
Location	chr7 : 16689067 .. 16690577 (+)
Sequence length	678

Genome Viewer

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

TTTCAACTTGGATGAAAATTTTAGTTATAGAGTGTAGTGTAGTATACAGTTCAAAATTAATATTAAAATACAAATGGATGATGTGTCATCAGTCTACTAGCCCTTTAATAAATATGCACCTAATTCTATCCAACTCCACCATTGAAGGATTTCCATTTCCATTTCCATCTCCATCTTCAAAGCCGGAGCTTCTGACTCGTTCGTTCTTTCGTTCTTGGTTCTTCTTAACTTTTCGAGGTTTTACCGTTGAATTCAACAACCTCTTTTGAAGGTTTATTCAATTTCACCAGTTTTCAGATCTTTGGTTTAATTCTTCAAGCTGGTGTGAGGTTTTGTTATAATTGCAGTTGAATCTTAGTGAGGTTTGTCTTTTTTGAAGGTTTAGACTCGGTATTGAACTTATAGGTCTTTTTGTTGTGTAATTGTTGTATTCTGTTTGTTAGATTTTGGAAATGGGTGTTTGTTGAGAGCAATTGGAATTGGGGAAGTGTTGAAAATATCTCTTGTTTTGCAGGTATTTTGGTCGATTGTTCTCGTTTGTGAACGCTATGCTTCGTAATCGAGCTGTGGACTGTTTGGTTGCTGGTTTTGTGGTGATGTTATTGAGTTGTAAAAGCTTCACGTTTGCTGCTGAGAGTGATTTGTCTTGTTTGAGAAGCATAAAGAAATCGTTTCAGGATCCTAATAAGTACTTAACATCATGGGATTTTAGCAGCAGATCGGAGGGGGCTATCTGCAGATTTATTGGGATTATATGTTGGCATCCTGATGAGAACAGTGTCTTAAGTATTAATTTGTCTAATATGGGGCTTAAGGGCCAATTCCCTACTGGGATTAAGAATTGCACTAGCTTAACTGGCTTGGACCTCTCCTTCAATCAGATTTCGGGTGAGATTCCTACCAATGTTGGATCCATTGTTCCGTTTGCCACTACCTTAGATTTGTCGTCGAATAAGTTTACTGGTCGTATCCCCAAAAGCATTGCTAATATTAGTTATCTGAATGTTCTGAAGCTGGATCACAACCAGTTGTCCGGACAGATCCCTCCGGAGCTTAGCTTGCTGGGACGGTTGAGAGAGTTCAGTGTAGCTAGCAATCTTTTGATTGGAGCAGTTCCTAAGTTTGGCGGTAAGCTGGGAAATAAAGCTGATATGTATGCAAATAATACTGGGCTGTGCGGTGGTCCTTTGAAACCTTGCTCCTCCACTTCCGATAAGCTTCGGTAGTTGCACTTAAGTTTGGGAACTTAATCGACAAAAATCAATGTTTAGAAATATAAATTAAAATATCATTTTTGGTTTATGTATTTTGAAACTTTAATTTTAGTTTATGAACTCTCCATTGTCTGATTATAATATTAAATTTAGTTTCAATCGATCGAGTACAAATACTTTCGTGTGAGGTAAAAAATCTGATAATTTCGTATATTTCTCACATGCATATTTGACGATTTGGTGTATTTATTTTTAGGTTGATGTATTTGACACACGATTCAAAGTATTTATTTTTAC

mRNA sequence

ATGCTTCGTAATCGAGCTGTGGACTGTTTGGTTGCTGGTTTTGTGGTGATGTTATTGAGTTGTAAAAGCTTCACGTTTGCTGCTGAGAGTGATTTGTCTTGTTTGAGAAGCATAAAGAAATCGTTTCAGGATCCTAATAAGTACTTAACATCATGGGATTTTAGCAGCAGATCGGAGGGGGCTATCTGCAGATTTATTGGGATTATATGTTGGCATCCTGATGAGAACAGTGTCTTAAGTATTAATTTGTCTAATATGGGGCTTAAGGGCCAATTCCCTACTGGGATTAAGAATTGCACTAGCTTAACTGGCTTGGACCTCTCCTTCAATCAGATTTCGGGTGAGATTCCTACCAATGTTGGATCCATTGTTCCGTTTGCCACTACCTTAGATTTGTCGTCGAATAAGTTTACTGGTCGTATCCCCAAAAGCATTGCTAATATTAGTTATCTGAATGTTCTGAAGCTGGATCACAACCAGTTGTCCGGACAGATCCCTCCGGAGCTTAGCTTGCTGGGACGGTTGAGAGAGTTCAGTGTAGCTAGCAATCTTTTGATTGGAGCAGTTCCTAAGTTTGGCGGTAAGCTGGGAAATAAAGCTGATATGTATGCAAATAATACTGGGCTGTGCGGTGGTCCTTTGAAACCTTGCTCCTCCACTTCCGATAAGCTTCGGTAG

Coding sequence (CDS)

ATGCTTCGTAATCGAGCTGTGGACTGTTTGGTTGCTGGTTTTGTGGTGATGTTATTGAGTTGTAAAAGCTTCACGTTTGCTGCTGAGAGTGATTTGTCTTGTTTGAGAAGCATAAAGAAATCGTTTCAGGATCCTAATAAGTACTTAACATCATGGGATTTTAGCAGCAGATCGGAGGGGGCTATCTGCAGATTTATTGGGATTATATGTTGGCATCCTGATGAGAACAGTGTCTTAAGTATTAATTTGTCTAATATGGGGCTTAAGGGCCAATTCCCTACTGGGATTAAGAATTGCACTAGCTTAACTGGCTTGGACCTCTCCTTCAATCAGATTTCGGGTGAGATTCCTACCAATGTTGGATCCATTGTTCCGTTTGCCACTACCTTAGATTTGTCGTCGAATAAGTTTACTGGTCGTATCCCCAAAAGCATTGCTAATATTAGTTATCTGAATGTTCTGAAGCTGGATCACAACCAGTTGTCCGGACAGATCCCTCCGGAGCTTAGCTTGCTGGGACGGTTGAGAGAGTTCAGTGTAGCTAGCAATCTTTTGATTGGAGCAGTTCCTAAGTTTGGCGGTAAGCTGGGAAATAAAGCTGATATGTATGCAAATAATACTGGGCTGTGCGGTGGTCCTTTGAAACCTTGCTCCTCCACTTCCGATAAGCTTCGGTAG

Protein sequence

MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPFATTLDLSSNKFTGRIPKSIANISYLNVLKLDHNQLSGQIPPELSLLGRLREFSVASNLLIGAVPKFGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR

Homology

[Close]

BLAST of CsaV3_7G027060.1 vs. NCBI nr
Match: XP_004148961.2 (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucumis sativus] >XP_011659235.1 PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucumis sativus] >KGN44709.1 hypothetical protein Csa_7G373520 [Cucumis sativus])

HSP 1 Score: 306.2 bits (783), Expect = 9.1e-80
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG
Sbjct: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
           AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV
Sbjct: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR 226
           XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR
Sbjct: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR 225

[Close]

BLAST of CsaV3_7G027060.1 vs. NCBI nr
Match: XP_008447262.1 (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucumis melo])

HSP 1 Score: 252.3 bits (643), Expect = 1.6e-63
Identity = 177/223 (79.37%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           ML N  VDCLVAGFVV+LLSC  FTFA ESDLSCLRSIKKSFQDPN+YLTSWDFS+RSEG
Sbjct: 1   MLCNPVVDCLVAGFVVVLLSCNGFTFATESDLSCLRSIKKSFQDPNEYLTSWDFSNRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
            IC+F GI+CWHPDEN VLSI LSNMGLKGQFP GIKNC+SLTGLDLSFNQISGEIPT++
Sbjct: 61  VICKFAGIMCWHPDENKVLSITLSNMGLKGQFPIGIKNCSSLTGLDLSFNQISGEIPTDI 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIV FAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 121 GSIVSFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLTEFSV 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDK 224
                       GG L NKADMYANN GLC GPLK CSSTS+K
Sbjct: 181 ASNLLIGPVPKFGGNLTNKADMYANNPGLCNGPLKSCSSTSNK 223

[Close]

BLAST of CsaV3_7G027060.1 vs. NCBI nr
Match: XP_004148962.1 (PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucumis sativus] >KGN44710.1 hypothetical protein Csa_7G373530 [Cucumis sativus])

HSP 1 Score: 244.2 bits (622), Expect = 4.3e-61
Identity = 173/222 (77.93%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           ML NR VDCLVAGFVV+LLSC  FTFA ESDL CLRSIK SFQDPN+YLTSWDFS+RSEG
Sbjct: 1   MLCNRVVDCLVAGFVVVLLSCNGFTFATESDLFCLRSIKNSFQDPNEYLTSWDFSNRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
            ICRF GI+CWHPDEN VLSI LSNMGLKGQFPTGIKNCTSLTGLDLSFNQ+SGEIP ++
Sbjct: 61  VICRFTGIMCWHPDENRVLSITLSNMGLKGQFPTGIKNCTSLTGLDLSFNQMSGEIPMDI 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIV +A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 121 GSIVKYAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEFSV 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSD 223
                       G  L NKADMYANN GLC GPLK CSS S+
Sbjct: 181 ASNLLIGPVPKFGSNLTNKADMYANNPGLCDGPLKSCSSASN 222

[Close]

BLAST of CsaV3_7G027060.1 vs. NCBI nr
Match: XP_022991528.1 (probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucurbita maxima] >XP_022991529.1 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucurbita maxima])

HSP 1 Score: 221.1 bits (562), Expect = 3.9e-54
Identity = 167/225 (74.22%), Postives = 184/225 (81.78%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKS-FTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSE 60
           ML NR VDCLVAGFVV+LLS  + FT A E+DLSCLRSIKKS QDPN YL SWDFS+RSE
Sbjct: 4   MLCNRFVDCLVAGFVVVLLSSSNGFTSATETDLSCLRSIKKSLQDPNNYLMSWDFSNRSE 63

Query: 61  GAICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTN 120
           G IC+F GI+CWHPDEN VLSI+LS+MGLKGQFP GIKNCTSLTGLDLS NQISG+IPT+
Sbjct: 64  GVICKFSGIMCWHPDENRVLSISLSDMGLKGQFPPGIKNCTSLTGLDLSNNQISGQIPTD 123

Query: 121 VGSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +G+I+ FA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX    
Sbjct: 124 IGTIIKFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTKFS 183

Query: 181 XXXXXXXXXXXXXGGKLGNKADMYANNTGLCGGP-LKPCSSTSDK 224
                        GG L NKA+MYANN GLCGGP + PC S S++
Sbjct: 184 VANNLLTGPVPQFGGNLTNKAEMYANNPGLCGGPSMNPCPSPSNR 228

[Close]

BLAST of CsaV3_7G027060.1 vs. NCBI nr
Match: XP_022954171.1 (probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucurbita moschata] >XP_022954172.1 probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cucurbita moschata])

HSP 1 Score: 219.5 bits (558), Expect = 1.1e-53
Identity = 162/225 (72.00%), Postives = 181/225 (80.44%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKS-FTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSE 60
           M+ NR VDCLVAGFVV+LLS  + FT A E+DLSCLRSIKKS QDPN YL SWDFS+RSE
Sbjct: 4   MVCNRFVDCLVAGFVVVLLSSSNGFTSATETDLSCLRSIKKSLQDPNNYLLSWDFSNRSE 63

Query: 61  GAICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTN 120
           G IC+F G++CWHPDEN VLSI+LS+MGLKGQFP GIKNCTSLTGLDLS NQISG+IPT+
Sbjct: 64  GVICKFSGVMCWHPDENRVLSISLSDMGLKGQFPPGIKNCTSLTGLDLSNNQISGQIPTD 123

Query: 121 VGSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           +G+I+ FA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX       
Sbjct: 124 IGTIIKFATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLTKFS 183

Query: 181 XXXXXXXXXXXXXGGKLGNKADMYANNTGLCGGP-LKPCSSTSDK 224
                        GG L NKA+MYANN GLCGGP + PC S S++
Sbjct: 184 VANNLLTGPVPQFGGNLTNKAEMYANNPGLCGGPSMNPCPSPSNR 228

[Close]

BLAST of CsaV3_7G027060.1 vs. TAIR10
Match: AT5G48380.1 (BAK1-interacting receptor-like kinase 1)

HSP 1 Score: 123.2 bits (308), Expect = 2.0e-28
Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 14  FVVMLLSC------KSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIG 73
           FV+ L +C       S   A ++++ CLR+ K   +DPN+YL++W F + + G IC+F G
Sbjct: 8   FVIWLYNCLCLLLLSSLVDADQANIDCLRTFKSQVEDPNRYLSTWVFGNETAGYICKFSG 67

Query: 74  IICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVP 126
           + CWH DEN VLSI LS  GL+G FP  +K C  LTGLDLS N  SG +P N+ +++P
Sbjct: 68  VTCWHDDENRVLSIKLSGYGLRGVFPPAVKLCADLTGLDLSRNNFSGPLPANISTLIP 125

[Close]

BLAST of CsaV3_7G027060.1 vs. TAIR10
Match: AT3G28450.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 108.6 bits (270), Expect = 5.1e-24
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 14  FVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHP 73
           F++ L  C S   A E D+ CLR +K S  DP   L SW+F + + G +C F+G+ CW+ 
Sbjct: 16  FIIFLCFCSSVMAADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNN 75

Query: 74  DENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVP 126
            EN V+++ L +MGL G+ P  ++ C SL  LDLS N++SG IPT + + +P
Sbjct: 76  QENRVINLELRDMGLSGKIPDSLQYCASLQKLDLSSNRLSGNIPTELCNWLP 127

[Close]

BLAST of CsaV3_7G027060.1 vs. TAIR10
Match: AT1G69990.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 100.1 bits (248), Expect = 1.8e-21
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 14  FVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHP 73
           FV++L+S       AE D+ CL+  K S +DP+  L +W F + S  +IC+  G+ CW+ 
Sbjct: 8   FVIILMSSSH----AEDDVLCLKGFKSSLKDPSNQLNTWSFPN-SSSSICKLTGVSCWNA 67

Query: 74  DENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPF 127
            EN +LS+ L +M L GQ P  +K C SL  LDLSFN  SG IP+ + S +P+
Sbjct: 68  KENRILSLQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPY 115

[Close]

BLAST of CsaV3_7G027060.1 vs. TAIR10
Match: AT1G27190.1 (Leucine-rich repeat protein kinase family protein)

HSP 1 Score: 98.2 bits (243), Expect = 6.8e-21
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 15  VVMLLSCKSF---TFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICW 74
           ++ LL   SF   + +AE D+ CL+ +K S  DP+  L+SW F + S  +IC+  G+ CW
Sbjct: 8   LLWLLFISSFLCSSSSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCW 67

Query: 75  HPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPF 127
           +  EN ++S+ L +M L G+ P  +K C SL  LDLS N +SG IP+ + S +P+
Sbjct: 68  NEKENRIISLQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPY 122

[Close]

BLAST of CsaV3_7G027060.1 vs. TAIR10
Match: AT1G28440.1 (HAESA-like 1)

HSP 1 Score: 61.6 bits (148), Expect = 7.1e-10
Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 26  FAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHPDENSVLSINLSN 85
           F+   D   L+ +K S  DP+ YL+SW+ +  S    CR+ G+ C   D +SV S++LS+
Sbjct: 14  FSLNQDGFILQQVKLSLDDPDSYLSSWNSNDASP---CRWSGVSC-AGDFSSVTSVDLSS 73

Query: 86  MGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGS 123
             L G FP+ I   ++L  L L  N I+  +P N+ +
Sbjct: 74  ANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAA 106

[Close]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot
Match: sp|Q9ASS4|Y5838_ARATH (Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Arabidopsis thaliana OX=3702 GN=At5g48380 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 3.6e-27
Identity = 54/118 (45.76%), Postives = 76/118 (64.41%), Query Frame = 0


Query: 14  FVVMLLSC------KSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIG 73
           FV+ L +C       S   A ++++ CLR+ K   +DPN+YL++W F + + G IC+F G
Sbjct: 8   FVIWLYNCLCLLLLSSLVDADQANIDCLRTFKSQVEDPNRYLSTWVFGNETAGYICKFSG 67

Query: 74  IICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVP 126
           + CWH DEN VLSI LS  GL+G FP  +K C  LTGLDLS N  SG +P N+ +++P
Sbjct: 68  VTCWHDDENRVLSIKLSGYGLRGVFPPAVKLCADLTGLDLSRNNFSGPLPANISTLIP 125

[Close]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot
Match: sp|Q9LSI9|BIR2_ARATH (Inactive LRR receptor-like serine/threonine-protein kinase BIR2 OS=Arabidopsis thaliana OX=3702 GN=BIR2 PE=1 SV=1)

HSP 1 Score: 108.6 bits (270), Expect = 9.1e-23
Identity = 47/112 (41.96%), Postives = 70/112 (62.50%), Query Frame = 0


Query: 14  FVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHP 73
           F++ L  C S   A E D+ CLR +K S  DP   L SW+F + + G +C F+G+ CW+ 
Sbjct: 16  FIIFLCFCSSVMAADEDDIRCLRGLKASLTDPQNALKSWNFDNTTLGFLCNFVGVSCWNN 75

Query: 74  DENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVP 126
            EN V+++ L +MGL G+ P  ++ C SL  LDLS N++SG IPT + + +P
Sbjct: 76  QENRVINLELRDMGLSGKIPDSLQYCASLQKLDLSSNRLSGNIPTELCNWLP 127

[Close]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot
Match: sp|C0LGI5|Y1699_ARATH (Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidopsis thaliana OX=3702 GN=At1g69990 PE=2 SV=1)

HSP 1 Score: 100.1 bits (248), Expect = 3.2e-20
Identity = 48/113 (42.48%), Postives = 69/113 (61.06%), Query Frame = 0


Query: 14  FVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHP 73
           FV++L+S       AE D+ CL+  K S +DP+  L +W F + S  +IC+  G+ CW+ 
Sbjct: 8   FVIILMSSSH----AEDDVLCLKGFKSSLKDPSNQLNTWSFPN-SSSSICKLTGVSCWNA 67

Query: 74  DENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPF 127
            EN +LS+ L +M L GQ P  +K C SL  LDLSFN  SG IP+ + S +P+
Sbjct: 68  KENRILSLQLQSMQLSGQIPESLKLCRSLQSLDLSFNDFSGLIPSQICSWLPY 115

[Close]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot
Match: sp|O04567|Y1719_ARATH (Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana OX=3702 GN=At1g27190 PE=1 SV=1)

HSP 1 Score: 98.2 bits (243), Expect = 1.2e-19
Identity = 46/115 (40.00%), Postives = 71/115 (61.74%), Query Frame = 0


Query: 15  VVMLLSCKSF---TFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICW 74
           ++ LL   SF   + +AE D+ CL+ +K S  DP+  L+SW F + S  +IC+  G+ CW
Sbjct: 8   LLWLLFISSFLCSSSSAEDDVLCLQGLKNSLIDPSSRLSSWSFPNSSASSICKLTGVSCW 67

Query: 75  HPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPF 127
           +  EN ++S+ L +M L G+ P  +K C SL  LDLS N +SG IP+ + S +P+
Sbjct: 68  NEKENRIISLQLQSMQLAGEIPESLKLCRSLQSLDLSGNDLSGSIPSQICSWLPY 122

[Close]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot
Match: sp|Q9SGP2|HSL1_ARATH (Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.3e-08
Identity = 34/97 (35.05%), Postives = 54/97 (55.67%), Query Frame = 0


Query: 26  FAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEGAICRFIGIICWHPDENSVLSINLSN 85
           F+   D   L+ +K S  DP+ YL+SW+ +  S    CR+ G+ C   D +SV S++LS+
Sbjct: 14  FSLNQDGFILQQVKLSLDDPDSYLSSWNSNDASP---CRWSGVSC-AGDFSSVTSVDLSS 73

Query: 86  MGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGS 123
             L G FP+ I   ++L  L L  N I+  +P N+ +
Sbjct: 74  ANLAGPFPSVICRLSNLAHLSLYNNSINSTLPLNIAA 106

[Close]

BLAST of CsaV3_7G027060.1 vs. TrEMBL
Match: tr|A0A0A0K711|A0A0A0K711_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G373520 PE=4 SV=1)

HSP 1 Score: 306.2 bits (783), Expect = 6.0e-80
Identity = 225/225 (100.00%), Postives = 225/225 (100.00%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG
Sbjct: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
           AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV
Sbjct: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
Sbjct: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR 226
           XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR
Sbjct: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDKLR 225

[Close]

BLAST of CsaV3_7G027060.1 vs. TrEMBL
Match: tr|A0A1S3BHX0|A0A1S3BHX0_CUCME (probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=Cucumis melo OX=3656 GN=LOC103489743 PE=4 SV=1)

HSP 1 Score: 252.3 bits (643), Expect = 1.0e-63
Identity = 177/223 (79.37%), Postives = 186/223 (83.41%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           ML N  VDCLVAGFVV+LLSC  FTFA ESDLSCLRSIKKSFQDPN+YLTSWDFS+RSEG
Sbjct: 1   MLCNPVVDCLVAGFVVVLLSCNGFTFATESDLSCLRSIKKSFQDPNEYLTSWDFSNRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
            IC+F GI+CWHPDEN VLSI LSNMGLKGQFP GIKNC+SLTGLDLSFNQISGEIPT++
Sbjct: 61  VICKFAGIMCWHPDENKVLSITLSNMGLKGQFPIGIKNCSSLTGLDLSFNQISGEIPTDI 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIV FAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX        
Sbjct: 121 GSIVSFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXGRLTEFSV 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSDK 224
                       GG L NKADMYANN GLC GPLK CSSTS+K
Sbjct: 181 ASNLLIGPVPKFGGNLTNKADMYANNPGLCNGPLKSCSSTSNK 223

[Close]

BLAST of CsaV3_7G027060.1 vs. TrEMBL
Match: tr|A0A0A0K4S1|A0A0A0K4S1_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G373530 PE=4 SV=1)

HSP 1 Score: 244.2 bits (622), Expect = 2.8e-61
Identity = 173/222 (77.93%), Postives = 182/222 (81.98%), Query Frame = 0


Query: 1   MLRNRAVDCLVAGFVVMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLTSWDFSSRSEG 60
           ML NR VDCLVAGFVV+LLSC  FTFA ESDL CLRSIK SFQDPN+YLTSWDFS+RSEG
Sbjct: 1   MLCNRVVDCLVAGFVVVLLSCNGFTFATESDLFCLRSIKNSFQDPNEYLTSWDFSNRSEG 60

Query: 61  AICRFIGIICWHPDENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNV 120
            ICRF GI+CWHPDEN VLSI LSNMGLKGQFPTGIKNCTSLTGLDLSFNQ+SGEIP ++
Sbjct: 61  VICRFTGIMCWHPDENRVLSITLSNMGLKGQFPTGIKNCTSLTGLDLSFNQMSGEIPMDI 120

Query: 121 GSIVPFAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 180
           GSIV +A  XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX      
Sbjct: 121 GSIVKYAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLTEFSV 180

Query: 181 XXXXXXXXXXXXGGKLGNKADMYANNTGLCGGPLKPCSSTSD 223
                       G  L NKADMYANN GLC GPLK CSS S+
Sbjct: 181 ASNLLIGPVPKFGSNLTNKADMYANNPGLCDGPLKSCSSASN 222

[Close]

BLAST of CsaV3_7G027060.1 vs. TrEMBL
Match: tr|V7AQ04|V7AQ04_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G035800g PE=4 SV=1)

HSP 1 Score: 152.1 bits (383), Expect = 1.5e-33
Identity = 67/112 (59.82%), Postives = 92/112 (82.14%), Query Frame = 0


Query: 16  VMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLT-SWDFSSRSEGAICRFIGIICWHPD 75
           ++L+SC   T+  E+D+ CLRSIK++ +DP+ YL  SWDF++R+EG IC+FIG+ CWHPD
Sbjct: 16  LLLISC-GMTYGTETDIFCLRSIKEALEDPSNYLKFSWDFNNRTEGFICKFIGVECWHPD 75

Query: 76  ENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPF 127
           EN VL++ LSNMGLKGQFP  I+NC+SLTGLDLS N++SG IP ++ ++VPF
Sbjct: 76  ENRVLNLKLSNMGLKGQFPRAIQNCSSLTGLDLSINKLSGTIPEDISTLVPF 126

[Close]

BLAST of CsaV3_7G027060.1 vs. TrEMBL
Match: tr|K7MFU0|K7MFU0_SOYBN (Uncharacterized protein OS=Glycine max OX=3847 GN=100305365 PE=4 SV=1)

HSP 1 Score: 149.8 bits (377), Expect = 7.2e-33
Identity = 66/113 (58.41%), Postives = 91/113 (80.53%), Query Frame = 0


Query: 16  VMLLSCKSFTFAAESDLSCLRSIKKSFQDPNKYLT-SWDFSSRSEGAICRFIGIICWHPD 75
           ++LL C   T+  ++D+ CL+SIK+S +DP  YL  SWDF++++EG ICRF G+ CWHPD
Sbjct: 17  LLLLGC-GITYGTDTDIFCLKSIKESLEDPYNYLKFSWDFNNKTEGYICRFNGVECWHPD 76

Query: 76  ENSVLSINLSNMGLKGQFPTGIKNCTSLTGLDLSFNQISGEIPTNVGSIVPFA 128
           EN VL++ LSNMGLKGQFP GI+NC+SLTGLDLS N++SG IP ++ +++PFA
Sbjct: 77  ENRVLNLKLSNMGLKGQFPRGIQNCSSLTGLDLSINKLSGTIPGDISTLIPFA 128

The following BLAST results are available for this feature:

BLAST of CsaV3_7G027060.1 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004148961.2	9.1e-80	100.00	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At...	[more]
XP_008447262.1	1.6e-63	79.37	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At...	[more]
XP_004148962.1	4.3e-61	77.93	PREDICTED: probably inactive leucine-rich repeat receptor-like protein kinase At...	[more]
XP_022991528.1	3.9e-54	74.22	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cu...	[more]
XP_022954171.1	1.1e-53	72.00	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 [Cu...	[more]

BLAST of CsaV3_7G027060.1 vs. TAIR10


Match Name	E-value	Identity	Description
AT5G48380.1	2.0e-28	45.76	BAK1-interacting receptor-like kinase 1	[more]
AT3G28450.1	5.1e-24	41.96	Leucine-rich repeat protein kinase family protein	[more]
AT1G69990.1	1.8e-21	42.48	Leucine-rich repeat protein kinase family protein	[more]
AT1G27190.1	6.8e-21	40.00	Leucine-rich repeat protein kinase family protein	[more]
AT1G28440.1	7.1e-10	35.05	HAESA-like 1	[more]

BLAST of CsaV3_7G027060.1 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9ASS4\|Y5838_ARATH	3.6e-27	45.76	Probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=...	[more]
sp\|Q9LSI9\|BIR2_ARATH	9.1e-23	41.96	Inactive LRR receptor-like serine/threonine-protein kinase BIR2 OS=Arabidopsis t...	[more]
sp\|C0LGI5\|Y1699_ARATH	3.2e-20	42.48	Probable LRR receptor-like serine/threonine-protein kinase At1g69990 OS=Arabidop...	[more]
sp\|O04567\|Y1719_ARATH	1.2e-19	40.00	Probable inactive receptor kinase At1g27190 OS=Arabidopsis thaliana OX=3702 GN=A...	[more]
sp\|Q9SGP2\|HSL1_ARATH	1.3e-08	35.05	Receptor-like protein kinase HSL1 OS=Arabidopsis thaliana OX=3702 GN=HSL1 PE=2 S...	[more]

BLAST of CsaV3_7G027060.1 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K711\|A0A0A0K711_CUCSA	6.0e-80	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G373520 PE=4 SV=1	[more]
tr\|A0A1S3BHX0\|A0A1S3BHX0_CUCME	1.0e-63	79.37	probably inactive leucine-rich repeat receptor-like protein kinase At5g48380 OS=...	[more]
tr\|A0A0A0K4S1\|A0A0A0K4S1_CUCSA	2.8e-61	77.93	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G373530 PE=4 SV=1	[more]
tr\|V7AQ04\|V7AQ04_PHAVU	1.5e-33	59.82	Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_010G035800g PE=4 ...	[more]
tr\|K7MFU0\|K7MFU0_SOYBN	7.2e-33	58.41	Uncharacterized protein OS=Glycine max OX=3847 GN=100305365 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this mRNA:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR013210	LRR_N_plant-typ
IPR001611	Leu-rich_rpt
IPR032675	LRR_dom_sf

GO Annotation

GO Assignments

This mRNA is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

This mRNA is a part of the following gene feature(s):


Feature Name	Unique Name	Type
CsaV3_7G027060	CsaV3_7G027060	gene

The following exon feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G027060.1.exon1	CsaV3_7G027060.1.exon1	exon
CsaV3_7G027060.1.exon2	CsaV3_7G027060.1.exon2	exon

The following CDS feature(s) are a part of this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G027060.1.cds2	CsaV3_7G027060.1.cds2	CDS

The following polypeptide feature(s) derives from this mRNA:


Feature Name	Unique Name	Type
CsaV3_7G027060.1	CsaV3_7G027060.1-protein	polypeptide

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR032675	Leucine-rich repeat domain superfamily	GENE3D	G3DSA:3.80.10.10		coord: 24..92 e-value: 1.7E-6 score: 28.3 coord: 93..224 e-value: 1.8E-35 score: 124.1
IPR001611	Leucine-rich repeat	PFAM	PF13516	LRR_6	coord: 98..115 e-value: 0.017 score: 15.0
IPR013210	Leucine-rich repeat-containing N-terminal, plant-type	PFAM	PF08263	LRRNT_2	coord: 29..71 e-value: 4.0E-7 score: 30.1
None	No IPR available	PANTHER	PTHR44101:SF5	SUBFAMILY NOT NAMED	coord: 13..223
None	No IPR available	PANTHER	PTHR44101	FAMILY NOT NAMED	coord: 13..223
None	No IPR available	PROSITE	PS51257	PROKAR_LIPOPROTEIN	coord: 1..21 score: 6.0
None	No IPR available	SUPERFAMILY	SSF52058	L domain-like	coord: 28..211