CsaV3_7G012650 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.GACGTGGAGGGACTAAAAAAATATTGCTGTTTAGTATATAAGGAAAACAAAGCATCTCTCGTCTACTCATACAGAGGCTATAGTAATCTCCATGGCCAATTTGGTGTTTTTCATTTCTCTTGTTCTTCTTCCTCACATCTCTTTAGCAACCTCTTCCTGCGATGGTCCATGTCAAACTCTAGATGATTGTGAAGGCCAATTGATTTGCATCAATGGTGTGTGCAACGATGATCCCAACATCGGCACTAACCAATGTTCTGATGGTGGATCCTCTCCATCTCCAAATAGTGATTGTCAACAGATTGGAAGCTTGAATTGCGATGGAGAATCCTTCCCACAGTACCAGTGCTCACCTCCAGTGACTTCCTCAACCCAAGCTATTTTGACAAACAATGATTTTAGCGAAGGTGGAGATGGTGGAGCTGAATCAAAGTGCGACGAGAGTTTTCACGATAACTCTGAACTAATTGTAGCACTATCAACTGGTTGGTATAATGGGGGTTCAAGATGTGGAAAGATGATTAGAATCACAGCAACAAATGGAAATTCAGTATTGGCTAAGGTAGTGGATGAGTGTGACTCTGTCAATGGATGTGATGCAGAGCATGCTAATCAGCCACCATGTCGTAATAATATTGTGGATGGCTCTGATGCAGTGTGGAGCATGTTAGAGTTAAATAAAGACGAGGGTGAAGAAGCTATCACATGGTCAGATGCTTAGGATTGAAAACCAATTAAATCTCATACGTGCTTTAATATTTATAAGTGGCATGGCAAAAGAAAATATAGTTTAAGAAAAAAAGAATAACGAATGTTATGAATGTCTAAAAAGAAAAGTTTATGATTAATAAAATAAGGTAGGTTCTCCTTGGAAGCTTTATCAATAAAAGCAACATAGTTTCTCTGTGTTGTTCAATGTGAGTATGGCTTTTCCTGCAATGAACCATGTGGGACTGTTCTTCTTATAACCTCTTTTCTTATCATTCGTGGGGTGTGTTTATTTCAATTTGGATTCCGTCCTTTGGGTGTGTTCTGTTACTTTTTGTTTTTGTATTTTATTTGTTCATTGACCTTACGTTGTGAGGTCACTATTTCAAAATGTGTTTGCTTTTGTTTTGTTACTTCCTTACATTTTTTTATACTAATGGGTTCTAATATTTG ATGGCCAATTTGGTGTTTTTCATTTCTCTTGTTCTTCTTCCTCACATCTCTTTAGCAACCTCTTCCTGCGATGGTCCATGTCAAACTCTAGATGATTGTGAAGGCCAATTGATTTGCATCAATGGTGTGTGCAACGATGATCCCAACATCGGCACTAACCAATGTTCTGATGGTGGATCCTCTCCATCTCCAAATAGTGATTGTCAACAGATTGGAAGCTTGAATTGCGATGGAGAATCCTTCCCACAGTACCAGTGCTCACCTCCAGTGACTTCCTCAACCCAAGCTATTTTGACAAACAATGATTTTAGCGAAGGTGGAGATGGTGGAGCTGAATCAAAGTGCGACGAGAGTTTTCACGATAACTCTGAACTAATTGTAGCACTATCAACTGGTTGGTATAATGGGGGTTCAAGATGTGGAAAGATGATTAGAATCACAGCAACAAATGGAAATTCAGTATTGGCTAAGGTAGTGGATGAGTGTGACTCTGTCAATGGATGTGATGCAGAGCATGCTAATCAGCCACCATGTCGTAATAATATTGTGGATGGCTCTGATGCAGTGTGGAGCATGTTAGAGTTAAATAAAGACGAGGGTGAAGAAGCTATCACATGGTCAGATGCTTAG ATGGCCAATTTGGTGTTTTTCATTTCTCTTGTTCTTCTTCCTCACATCTCTTTAGCAACCTCTTCCTGCGATGGTCCATGTCAAACTCTAGATGATTGTGAAGGCCAATTGATTTGCATCAATGGTGTGTGCAACGATGATCCCAACATCGGCACTAACCAATGTTCTGATGGTGGATCCTCTCCATCTCCAAATAGTGATTGTCAACAGATTGGAAGCTTGAATTGCGATGGAGAATCCTTCCCACAGTACCAGTGCTCACCTCCAGTGACTTCCTCAACCCAAGCTATTTTGACAAACAATGATTTTAGCGAAGGTGGAGATGGTGGAGCTGAATCAAAGTGCGACGAGAGTTTTCACGATAACTCTGAACTAATTGTAGCACTATCAACTGGTTGGTATAATGGGGGTTCAAGATGTGGAAAGATGATTAGAATCACAGCAACAAATGGAAATTCAGTATTGGCTAAGGTAGTGGATGAGTGTGACTCTGTCAATGGATGTGATGCAGAGCATGCTAATCAGCCACCATGTCGTAATAATATTGTGGATGGCTCTGATGCAGTGTGGAGCATGTTAGAGTTAAATAAAGACGAGGGTGAAGAAGCTATCACATGGTCAGATGCTTAG MANLVFFISLVLLPHISLATSSCDGPCQTLDDCEGQLICINGVCNDDPNIGTNQCSDGGSSPSPNSDCQQIGSLNCDGESFPQYQCSPPVTSSTQAILTNNDFSEGGDGGAESKCDESFHDNSELIVALSTGWYNGGSRCGKMIRITATNGNSVLAKVVDECDSVNGCDAEHANQPPCRNNIVDGSDAVWSMLELNKDEGEEAITWSDA
BLAST of CsaV3_7G012650 vs. NCBI nr
Match: XP_004148934.1 (PREDICTED: kiwellin-like [Cucumis sativus] >KGN44019.1 hypothetical protein Csa_7G106800 [Cucumis sativus]) HSP 1 Score: 436.4 bits (1121), Expect = 5.4e-119 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. NCBI nr
Match: XP_008462999.2 (PREDICTED: kiwellin-like [Cucumis melo]) HSP 1 Score: 409.1 bits (1050), Expect = 9.3e-111 Identity = 195/209 (93.30%), Postives = 200/209 (95.69%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. NCBI nr
Match: XP_022936979.1 (kiwellin-like [Cucurbita moschata]) HSP 1 Score: 369.8 bits (948), Expect = 6.2e-99 Identity = 173/209 (82.78%), Postives = 190/209 (90.91%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. NCBI nr
Match: XP_022975857.1 (kiwellin-like [Cucurbita maxima]) HSP 1 Score: 369.0 bits (946), Expect = 1.1e-98 Identity = 171/209 (81.82%), Postives = 191/209 (91.39%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. NCBI nr
Match: XP_023536527.1 (kiwellin-like [Cucurbita pepo subsp. pepo]) HSP 1 Score: 368.2 bits (944), Expect = 1.8e-98 Identity = 171/209 (81.82%), Postives = 190/209 (90.91%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. Swiss-Prot
Match: sp|P84527|KIWEL_ACTDE (Kiwellin OS=Actinidia deliciosa OX=3627 PE=1 SV=1) HSP 1 Score: 273.1 bits (697), Expect = 2.6e-72 Identity = 131/189 (69.31%), Postives = 150/189 (79.37%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. Swiss-Prot
Match: sp|Q9M4H4|GRI22_VITVI (Ripening-related protein grip22 OS=Vitis vinifera OX=29760 GN=grip22 PE=2 SV=1) HSP 1 Score: 240.0 bits (611), Expect = 2.4e-62 Identity = 122/212 (57.55%), Postives = 146/212 (68.87%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. Swiss-Prot
Match: sp|Q7XVA8|RIP1_ORYSJ (Putative ripening-related protein 1 OS=Oryza sativa subsp. japonica OX=39947 GN=Os04g0364800 PE=3 SV=2) HSP 1 Score: 184.1 bits (466), Expect = 1.6e-45 Identity = 96/162 (59.26%), Postives = 112/162 (69.14%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. Swiss-Prot
Match: sp|Q6H5X0|RIP2_ORYSJ (Putative ripening-related protein 2 OS=Oryza sativa subsp. japonica OX=39947 GN=Os02g0637000 PE=3 SV=1) HSP 1 Score: 175.6 bits (444), Expect = 5.6e-43 Identity = 91/157 (57.96%), Postives = 106/157 (67.52%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. Swiss-Prot
Match: sp|Q9FWT5|RIP3_ORYSJ (Ripening-related protein 3 OS=Oryza sativa subsp. japonica OX=39947 GN=Os10g0490100 PE=2 SV=1) HSP 1 Score: 169.9 bits (429), Expect = 3.1e-41 Identity = 84/163 (51.53%), Postives = 105/163 (64.42%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. TrEMBL
Match: tr|A0A0A0K532|A0A0A0K532_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G106800 PE=4 SV=1) HSP 1 Score: 436.4 bits (1121), Expect = 3.6e-119 Identity = 209/209 (100.00%), Postives = 209/209 (100.00%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. TrEMBL
Match: tr|A0A1S3CI58|A0A1S3CI58_CUCME (kiwellin-like OS=Cucumis melo OX=3656 GN=LOC103501249 PE=4 SV=1) HSP 1 Score: 409.1 bits (1050), Expect = 6.1e-111 Identity = 195/209 (93.30%), Postives = 200/209 (95.69%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. TrEMBL
Match: tr|A0A1S3CNR1|A0A1S3CNR1_CUCME (kiwellin-like OS=Cucumis melo OX=3656 GN=LOC103503006 PE=4 SV=1) HSP 1 Score: 298.9 bits (764), Expect = 8.9e-78 Identity = 139/204 (68.14%), Postives = 165/204 (80.88%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. TrEMBL
Match: tr|A0A2K3L814|A0A2K3L814_TRIPR (Kiwellin OS=Trifolium pratense OX=57577 GN=kiwellin PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 9.9e-77 Identity = 144/217 (66.36%), Postives = 169/217 (77.88%), Query Frame = 0
BLAST of CsaV3_7G012650 vs. TrEMBL
Match: tr|A0A1R3J9M1|A0A1R3J9M1_9ROSI (Barwin-related endoglucanase OS=Corchorus olitorius OX=93759 GN=COLO4_18298 PE=4 SV=1) HSP 1 Score: 295.4 bits (755), Expect = 9.9e-77 Identity = 137/204 (67.16%), Postives = 163/204 (79.90%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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