CsaV3_7G005560 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G005560
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F-box/kelch-repeat protein
Location	chr7 : 3294549 .. 3296255 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: exonpolypeptideCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

AAAAGATTAAGAGTGAATTAGATGAAATAAAATGGGTTAATTTACAAAAACTTCAATATTGTTGGATTTTTGCTCTAAATTGAAAAAATTGGAACGATGAGTTATAAGAAAAGAATAAGAAAAGGGAAAAGTATCCAATGAACAATAATAGTTGGAAAAGACATTCCCCCATTTCACTTCCCCACACCTAAAACAAACAAAAGAGCAGAAATTAGACATTGGAAATTTTTTAAATAATAGTAATAATAAAAAAAAAAAGGTCATTTTCTAGAAGCATTTTTCTCTCTATAAATACCCAAATAAATAAATAAATAAAATGAGAAACATCAAACAAAGAATGATGGATATCGGAGATGAATTGATCCCTGGTTTGCCCGAAGAAATTGCCCTTGAGTGCTTAACTCGATCCCATTTCACAACCCATCGAGTTGCTGCCCGAGTTTCCCGTCGCTGGCACCGTCTATTTCTCAGCCGCCATTTTTACAATCTCAGAAAACTTTCCGGCCGAACCCATAAAGCGGTGTTCGCCGTCCAGTCACTTCTGCAGCCAGTTAGCGACGAAGCCAAATCAGCCGCTCCGATCGCGTTTGGTGTGTCGGCCTTCGATCCGGCTACCGGTAATTGGACTCGGATCAAACCCATCGAAAAGTACCCGAATGGGCTTCCCCTGTTCTGCCGGATAATTGGCGTCGATGGAAAACTGGCGGTGATCGGCGGATGGGATCCAGTGAGTTATCGTCCGGTGGAGGATGTGTTCGTGTACGAATTCGCAGCGGAGAAATGGAGGCAAGGGAAAGGGATGCCGGAGAAGAGGTCGTTTTTCGGCGCAACAGAGTACGGAGGTGAAATTTTCGTCGCGGGAGGGCACGACGAGGGGAAGAACGCAGCAGCGTCGGCGTGGGTTTACAACATTAGAAATGACGAATGGAGAGAGTTGCCGGCAATGAGTAGGGGAAGAGACGAGTGCGAGGCGGTGGCGATTGGGTCGGAGATATGGGTAGTGAGTGGGTACGAGACTGAAAATCAGGGGAATTTCGAAAGGACAGCGGAGGTTTATGAGACAAAGACAGGGAAGTGGCGGCGCGTGGAGAGCGCGTGGTGTGAGGAGAGAAGTCCAAGAAACGTGGTGGGAGTGGGGAGAGAAGGGGAATTATTCAACTGGGCAACTGCAGCGGCGGCGGCGAAAACCACGGCGGTGACGGGGGAGGGAATTGGGGGTGAATATGGAGGAAAAGGCGATTGTGTTCATGGGGAGGAATGGAGTTTTCATGGGAGAATGCCAAAATGGTAAATTGGAAAGAATAGAATTGCCGGAGGAATTTTCGGGGTTCGTACAATCGGCTTGTTACACCCACATTTGATTTCAACTATCTTTCATTCCTTTTTTTTCCTTTTTCTATTTCTTAATAGCATTTTGTATTATTATTTATGTTAAAATACAATTTTGGTGTTTGTCAATAAAAATTCCATATAGAGATTTATGTTTAAGATTTATTGAAAACATATTCAGATTTACTATTAAATTTATAAGCAAATTAGTAAAATTGTTGCGTATGTGCATTTAAAACGTATTGAATATTAACTATCAATTTTGTTTATGTTTTGAAATTTATTCTTCTTATACTTCACTCACAATGAGTCTTAAATAAACTTTGGAATACAAAAAGCGTAATATAACTTAATTGTTAATTTTTGTTTTCAATAATG

mRNA sequence

ATGAGAAACATCAAACAAAGAATGATGGATATCGGAGATGAATTGATCCCTGGTTTGCCCGAAGAAATTGCCCTTGAGTGCTTAACTCGATCCCATTTCACAACCCATCGAGTTGCTGCCCGAGTTTCCCGTCGCTGGCACCGTCTATTTCTCAGCCGCCATTTTTACAATCTCAGAAAACTTTCCGGCCGAACCCATAAAGCGGTGTTCGCCGTCCAGTCACTTCTGCAGCCAGTTAGCGACGAAGCCAAATCAGCCGCTCCGATCGCGTTTGGTGTGTCGGCCTTCGATCCGGCTACCGGTAATTGGACTCGGATCAAACCCATCGAAAAGTACCCGAATGGGCTTCCCCTGTTCTGCCGGATAATTGGCGTCGATGGAAAACTGGCGGTGATCGGCGGATGGGATCCAGTGAGTTATCGTCCGGTGGAGGATGTGTTCGTGTACGAATTCGCAGCGGAGAAATGGAGGCAAGGGAAAGGGATGCCGGAGAAGAGGTCGTTTTTCGGCGCAACAGAGTACGGAGGTGAAATTTTCGTCGCGGGAGGGCACGACGAGGGGAAGAACGCAGCAGCGTCGGCGTGGGTTTACAACATTAGAAATGACGAATGGAGAGAGTTGCCGGCAATGAGTAGGGGAAGAGACGAGTGCGAGGCGGTGGCGATTGGGTCGGAGATATGGGTAGTGAGTGGGTACGAGACTGAAAATCAGGGGAATTTCGAAAGGACAGCGGAGGTTTATGAGACAAAGACAGGGAAGTGGCGGCGCGTGGAGAGCGCGTGGTGTGAGGAGAGAAGTCCAAGAAACGTGGTGGGAGTGGGGAGAGAAGGGGAATTATTCAACTGGGCAACTGCAGCGGCGGCGGCGAAAACCACGGCGGTGACGGGGGAGGGAATTGGGGGTGAATATGGAGGAAAAGGCGATTGTGTTCATGGGGAGGAATGGAGTTTTCATGGGAGAATGCCAAAATGGTAA

Coding sequence (CDS)

ATGAGAAACATCAAACAAAGAATGATGGATATCGGAGATGAATTGATCCCTGGTTTGCCCGAAGAAATTGCCCTTGAGTGCTTAACTCGATCCCATTTCACAACCCATCGAGTTGCTGCCCGAGTTTCCCGTCGCTGGCACCGTCTATTTCTCAGCCGCCATTTTTACAATCTCAGAAAACTTTCCGGCCGAACCCATAAAGCGGTGTTCGCCGTCCAGTCACTTCTGCAGCCAGTTAGCGACGAAGCCAAATCAGCCGCTCCGATCGCGTTTGGTGTGTCGGCCTTCGATCCGGCTACCGGTAATTGGACTCGGATCAAACCCATCGAAAAGTACCCGAATGGGCTTCCCCTGTTCTGCCGGATAATTGGCGTCGATGGAAAACTGGCGGTGATCGGCGGATGGGATCCAGTGAGTTATCGTCCGGTGGAGGATGTGTTCGTGTACGAATTCGCAGCGGAGAAATGGAGGCAAGGGAAAGGGATGCCGGAGAAGAGGTCGTTTTTCGGCGCAACAGAGTACGGAGGTGAAATTTTCGTCGCGGGAGGGCACGACGAGGGGAAGAACGCAGCAGCGTCGGCGTGGGTTTACAACATTAGAAATGACGAATGGAGAGAGTTGCCGGCAATGAGTAGGGGAAGAGACGAGTGCGAGGCGGTGGCGATTGGGTCGGAGATATGGGTAGTGAGTGGGTACGAGACTGAAAATCAGGGGAATTTCGAAAGGACAGCGGAGGTTTATGAGACAAAGACAGGGAAGTGGCGGCGCGTGGAGAGCGCGTGGTGTGAGGAGAGAAGTCCAAGAAACGTGGTGGGAGTGGGGAGAGAAGGGGAATTATTCAACTGGGCAACTGCAGCGGCGGCGGCGAAAACCACGGCGGTGACGGGGGAGGGAATTGGGGGTGAATATGGAGGAAAAGGCGATTGTGTTCATGGGGAGGAATGGAGTTTTCATGGGAGAATGCCAAAATGGTAA

Protein sequence

MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNAAASAWVYNIRNDEWRELPAMSRGRDECEAVAIGSEIWVVSGYETENQGNFERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGGEYGGKGDCVHGEEWSFHGRMPKW

Homology

[Close]

BLAST of CsaV3_7G005560 vs. NCBI nr
Match: XP_004136552.2 (PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis sativus] >KGN59267.1 hypothetical protein Csa_3G792070 [Cucumis sativus])

HSP 1 Score: 515.4 bits (1326), Expect = 1.4e-142
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK 60
           MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK
Sbjct: 1   MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK 60

Query: 61  LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC 120
           LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC
Sbjct: 61  LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC 120

Query: 121 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV 180
           RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV
Sbjct: 121 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV 180

Query: 181 AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF 240
           AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF
Sbjct: 181 AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF 240

Query: 241 ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIG 300
           ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGI 
Sbjct: 241 ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIV 300

Query: 301 G 302
           G
Sbjct: 301 G 301

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BLAST of CsaV3_7G005560 vs. NCBI nr
Match: XP_008443007.1 (PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis melo])

HSP 1 Score: 473.0 bits (1216), Expect = 8.1e-130
Identity = 279/294 (94.90%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 8   MMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHK 67
           MMD+ DELIPGLPEEIALECLTRSHFTTHR+AARVSRRW RLFLSRHFYNLRKLSGRTHK
Sbjct: 1   MMDMADELIPGLPEEIALECLTRSHFTTHRLAARVSRRWRRLFLSRHFYNLRKLSGRTHK 60

Query: 68  AVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG 127
           AVFAVQSL  PVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG
Sbjct: 61  AVFAVQSLPLPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG 120

Query: 128 KLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG 187
           KLAVIGGWDPVSYRPVEDVFVY+FAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG
Sbjct: 121 KLAVIGGWDPVSYRPVEDVFVYDFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG 180

Query: 188 KNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVY 247
           KNAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQG+FERTAEVY
Sbjct: 181 KNAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGDFERTAEVY 240

Query: 248 ETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGG 302
           ETKTGKWRRVE+AWCEERSPRNVVGVGREGELFNWAT   AAKTTAV GEGI G
Sbjct: 241 ETKTGKWRRVENAWCEERSPRNVVGVGREGELFNWAT--VAAKTTAVEGEGIVG 292

[Close]

BLAST of CsaV3_7G005560 vs. NCBI nr
Match: XP_022983021.1 (F-box/kelch-repeat protein At2g44130-like [Cucurbita maxima])

HSP 1 Score: 379.0 bits (972), Expect = 1.6e-101
Identity = 232/291 (79.73%), Postives = 250/291 (85.91%), Query Frame = 0


Query: 11  IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 70
           +  ELIPGLPEEIAL+CL RSHFTTHR+AARV RRW  LFLSR F+NLR++S RTHKAVF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFHNLRRISDRTHKAVF 60

Query: 71  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 130
           AVQSLL P  D  KS AP+AFG+SAFDPATG WT IKPIEKY NGLPLFCR+IGVDGKL 
Sbjct: 61  AVQSLLVPAGDGDKSTAPLAFGLSAFDPATGKWTWIKPIEKYSNGLPLFCRLIGVDGKLV 120

Query: 131 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 190
           VIGGWDP SYRPVEDVFVY+ AAEKWRQGKGMP  RSFF A E GGEIFVAGGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEDVFVYDMAAEKWRQGKGMPATRSFFSAVECGGEIFVAGGHDEWKNA 180

Query: 191 AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETK 250
           A+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TENQGNFE TAE+++T+
Sbjct: 181 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTENQGNFEATAEIFDTE 240

Query: 251 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGG 302
           T KWRRV+SAW EERSPR VVGV REG LF+WA A AA  TTAVT E + G
Sbjct: 241 TEKWRRVDSAWREERSPRGVVGVSREGGLFSWAAAVAA--TTAVTAEEVVG 289

[Close]

BLAST of CsaV3_7G005560 vs. NCBI nr
Match: XP_022935259.1 (F-box/kelch-repeat protein At2g44130-like [Cucurbita moschata])

HSP 1 Score: 378.6 bits (971), Expect = 2.1e-101
Identity = 232/291 (79.73%), Postives = 249/291 (85.57%), Query Frame = 0


Query: 11  IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 70
           +  ELIPGLPEEIAL+CL RSHFTTHR+AARV RRW  LFLSR FYNLR++S RTHK VF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFYNLRRISDRTHKVVF 60

Query: 71  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 130
           AVQSLL P  D  KS AP AFG+SAFDPATG WT IKPIEKYPN LPLFCR+IGVDGKL 
Sbjct: 61  AVQSLLVPAGDGDKSTAPPAFGLSAFDPATGKWTWIKPIEKYPNRLPLFCRLIGVDGKLV 120

Query: 131 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 190
           VIGGWDP SYRPVE+VFVY+ AAEKWRQGKGMP  RSFF A E+GGEIFVAGGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEEVFVYDIAAEKWRQGKGMPATRSFFSAVEFGGEIFVAGGHDEWKNA 180

Query: 191 AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETK 250
           A XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TENQGNFE TAE++ T+
Sbjct: 181 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTENQGNFEATAEIFNTE 240

Query: 251 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGG 302
           T +WRRV+SAW EERSPR VVGV REGELF+W  AAA   TTAVT EG+ G
Sbjct: 241 TEEWRRVDSAWREERSPRGVVGVSREGELFSW--AAAVETTTAVTAEGVVG 289

[Close]

BLAST of CsaV3_7G005560 vs. NCBI nr
Match: XP_023528326.1 (F-box/kelch-repeat protein At2g44130-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 374.8 bits (961), Expect = 3.0e-100
Identity = 230/291 (79.04%), Postives = 248/291 (85.22%), Query Frame = 0


Query: 11  IGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVF 70
           +  ELIPGLPEEIAL+CL RSHFTTHR+AARV RRW  LFLSR FYNLR++S RTHKAVF
Sbjct: 1   MAQELIPGLPEEIALDCLIRSHFTTHRIAARVCRRWRGLFLSRDFYNLRRISDRTHKAVF 60

Query: 71  AVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 130
           AVQSLL P  D  KS AP AFG+SAFDPA+G WT IKPI KYPNGLPLFCR+IGVDGKL 
Sbjct: 61  AVQSLLLPAGDGDKSTAPPAFGLSAFDPASGKWTWIKPIGKYPNGLPLFCRLIGVDGKLV 120

Query: 131 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNA 190
           VIGGWDP SYRPVEDVFVY+ AAEKWRQGK MP  RSFF A E GGEIFVAGGHDE KNA
Sbjct: 121 VIGGWDPASYRPVEDVFVYDIAAEKWRQGKEMPATRSFFSAVECGGEIFVAGGHDEWKNA 180

Query: 191 AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETK 250
           A+ XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX TENQGNFE +AE++ T+
Sbjct: 181 ASTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXRTENQGNFEASAEIFNTE 240

Query: 251 TGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGG 302
           T +WRRV+SAW EERSPR VVGV REGELF+W  AAA   TTAVT EG+ G
Sbjct: 241 TEEWRRVDSAWREERSPRGVVGVSREGELFSW--AAAVETTTAVTAEGVVG 289

[Close]

BLAST of CsaV3_7G005560 vs. TAIR10
Match: AT1G15670.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 138.3 bits (347), Expect = 8.6e-33
Identity = 83/246 (33.74%), Postives = 115/246 (46.75%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIP LPE +A ECL RS +    + A V + W R      F+  RK SG + + V   Q
Sbjct: 2   ELIPDLPETVAYECLLRSSYKQFPLMASVCKLWQREISLSDFFRHRKASGHSQELVVLSQ 61

Query: 74  SLLQPVSDEA---KSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 133
           + + PV +     K+     + +S  +  TG  + + P+  + NGLPLFCR++ V   L 
Sbjct: 62  ARVDPVKELVSGNKTIPTPVYRISVLELGTGLRSELPPVPGHSNGLPLFCRLVSVGSDLV 121

Query: 134 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMP-EKRSFFG-ATEYGGEIFVAGGHDEGK 193
           V+ G DPV++R  + VFV+ F    WR GK MP   RSFF  A++    +FVAGGHDE K
Sbjct: 122 VLCGLDPVTWRTSDSVFVFSFLTSTWRVGKSMPGGPRSFFACASDSQRNVFVAGGHDEDK 181

Query: 194 NAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYE 253
           NA                                           TE QG F +TAE ++
Sbjct: 182 NAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHAGKFHVIGGYSTEEQGQFSKTAESFD 241

Query: 254 TKTGKW 255
             T +W
Sbjct: 242 VTTWRW 247

[Close]

BLAST of CsaV3_7G005560 vs. TAIR10
Match: AT2G44130.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 137.5 bits (345), Expect = 1.5e-32
Identity = 92/280 (32.86%), Postives = 124/280 (44.29%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIPGLP E+ALECL R  F        V R W  L     F   R+  G+T   +  VQ
Sbjct: 18  ELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQ 77

Query: 74  SLLQPVS-----------DEAKSA--------APIAFGVSAFDPATGNWTRIKPIEKYPN 133
            L  P+            DE KS             FG+S ++ A   W R+   E+   
Sbjct: 78  PLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRVAFPEE--E 137

Query: 134 GLPLFCRIIGVD--GKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFG-A 193
            +PLFC  + +   GK+ +IGGWDP + +P  DV+V EFA  KWR+G  M E RSFF  A
Sbjct: 138 QIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSFFACA 197

Query: 194 TEYGGEIFVAGGHDEGKNA--AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           +    +++VAGGHD+ KNA  +A                                     
Sbjct: 198 SVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVL 257

Query: 254 XXXXTENQGNFERTAEVYETKTGKWRRVESAW-CEERSPR 269
               TE+QG F    E+Y+  T  W R+++ W   + SPR
Sbjct: 258 SGYGTESQGRFRSDGEIYDPATDSWSRIDNVWRFPDTSPR 295

[Close]

BLAST of CsaV3_7G005560 vs. TAIR10
Match: AT1G80440.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 136.0 bits (341), Expect = 4.3e-32
Identity = 80/243 (32.92%), Postives = 114/243 (46.91%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIP LP+++A ECL RS +    V A V R W+R      F + RK S  + + +   Q
Sbjct: 2   ELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQ 61

Query: 74  SLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLAVIG 133
           + + P       A P  + +S  +  +G WT + PI     GLPLFCR++ V   L V+G
Sbjct: 62  ARVDPAGSGKIIATP-EYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLG 121

Query: 134 GWDPVSYRPVEDVFVYEFAAEKWRQGKGMP-EKRSFFG-ATEYGGEIFVAGGHDEGKNAA 193
           G DP++++  + VFV+ F   KWR G  MP  +RSFFG A++    + VAGGH+E K A 
Sbjct: 122 GLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCAL 181

Query: 194 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKT 253
                                                     TE QG F +TAE ++  T
Sbjct: 182 TSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYATEEQGQFSKTAESFDVST 241

Query: 254 GKW 255
            +W
Sbjct: 242 WEW 243

[Close]

BLAST of CsaV3_7G005560 vs. TAIR10
Match: AT3G59940.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 123.2 bits (308), Expect = 2.9e-28
Identity = 95/324 (29.32%), Postives = 134/324 (41.36%), Query Frame = 0


Query: 5   KQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGR 64
           K++  +I  +LIPGLPEE+A+ECL R  F  H     V R W  +  SR F   R   G+
Sbjct: 5   KKKSGEIRGDLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGK 64

Query: 65  THKAVFAVQSLLQPVSD---------------------------EAKSAAPIAFGVSAFD 124
               +  VQ L  P S                            + +      +G+S ++
Sbjct: 65  AESLLCLVQPLTSPPSPAMMEXXXXXXXXXXXXXXXXQMTQQLLQPRITGTPLYGLSVYN 124

Query: 125 PATGNWTRIKPIEKYPNGLPLFCRIIGVD--GKLAVIGGWDPVSYRPVEDVFVYEFAA-- 184
                W R+      P  +PLFC  + +   GK+ +IGGWDP + +PV DVFV +F A  
Sbjct: 125 ATLDTWHRV----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGE 184

Query: 185 ---EKWRQGKGMPEKRSFFGATEYGG-EIFVAGGHDEGKNA--AAXXXXXXXXXXXXXXX 244
               ++R+G+ M   RSFF     G  +++VAGGHD+ KNA  +A               
Sbjct: 185 GSGRRFRRGRPMSAARSFFACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSMLPP 244

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKTGKWRRVESAW-CEERS 291
                                     TE QG F    E+Y+  T  W  +E+ W   + S
Sbjct: 245 MTEGRDECHGFSMATDPGFCVLSGYGTETQGQFRSDGEIYDPITNSWSTIENVWPFPDLS 304

[Close]

BLAST of CsaV3_7G005560 vs. TAIR10
Match: AT1G55270.1 (Galactose oxidase/kelch repeat superfamily protein)

HSP 1 Score: 69.7 bits (169), Expect = 3.7e-12
Identity = 47/168 (27.98%), Postives = 72/168 (42.86%), Query Frame = 0


Query: 2   RNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKL 61
           +N K+    I   L+PGLP+++A+ CL R     HR    V +RW+RL     FY+ RKL
Sbjct: 65  KNSKRERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKL 124

Query: 62  SGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPI-EKYPNGLPLFC 121
            G + + V+             K         + FDP +  W  + P+  +Y   +   C
Sbjct: 125 LGMSEEWVYVF-----------KRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGC 184

Query: 122 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSF 169
            ++     L + GG DP+    +  V  Y     KW +   M  KR F
Sbjct: 185 AVLS-GCHLYLFGGKDPLR-GSMRRVIFYNARTNKWHRAPDMLRKRHF 219

[Close]

BLAST of CsaV3_7G005560 vs. Swiss-Prot
Match: sp|Q9LMR5|FK126_ARATH (F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g15670 PE=2 SV=1)

HSP 1 Score: 138.3 bits (347), Expect = 1.5e-31
Identity = 83/246 (33.74%), Postives = 115/246 (46.75%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIP LPE +A ECL RS +    + A V + W R      F+  RK SG + + V   Q
Sbjct: 2   ELIPDLPETVAYECLLRSSYKQFPLMASVCKLWQREISLSDFFRHRKASGHSQELVVLSQ 61

Query: 74  SLLQPVSDEA---KSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLA 133
           + + PV +     K+     + +S  +  TG  + + P+  + NGLPLFCR++ V   L 
Sbjct: 62  ARVDPVKELVSGNKTIPTPVYRISVLELGTGLRSELPPVPGHSNGLPLFCRLVSVGSDLV 121

Query: 134 VIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMP-EKRSFFG-ATEYGGEIFVAGGHDEGK 193
           V+ G DPV++R  + VFV+ F    WR GK MP   RSFF  A++    +FVAGGHDE K
Sbjct: 122 VLCGLDPVTWRTSDSVFVFSFLTSTWRVGKSMPGGPRSFFACASDSQRNVFVAGGHDEDK 181

Query: 194 NAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYE 253
           NA                                           TE QG F +TAE ++
Sbjct: 182 NAMMSALVYDVAEDRWAFLPDMGRERDECTAIFHAGKFHVIGGYSTEEQGQFSKTAESFD 241

Query: 254 TKTGKW 255
             T +W
Sbjct: 242 VTTWRW 247

[Close]

BLAST of CsaV3_7G005560 vs. Swiss-Prot
Match: sp|O80582|FBK46_ARATH (F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g44130 PE=2 SV=2)

HSP 1 Score: 137.5 bits (345), Expect = 2.6e-31
Identity = 92/280 (32.86%), Postives = 124/280 (44.29%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIPGLP E+ALECL R  F        V R W  L     F   R+  G+T   +  VQ
Sbjct: 18  ELIPGLPSELALECLVRVPFQFQSAMRSVCRSWRSLLSDSSFIQERRRCGKTELLLCLVQ 77

Query: 74  SLLQPVS-----------DEAKSA--------APIAFGVSAFDPATGNWTRIKPIEKYPN 133
            L  P+            DE KS             FG+S ++ A   W R+   E+   
Sbjct: 78  PLTPPIPASKSVDETLMVDEKKSEDESHPRVFCTPRFGLSVYNAAMSTWHRVAFPEE--E 137

Query: 134 GLPLFCRIIGVD--GKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFG-A 193
            +PLFC  + +   GK+ +IGGWDP + +P  DV+V EFA  KWR+G  M E RSFF  A
Sbjct: 138 QIPLFCECVVLQDAGKILLIGGWDPETLQPTRDVYVLEFAGRKWRRGAPMKESRSFFACA 197

Query: 194 TEYGGEIFVAGGHDEGKNA--AAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 253
           +    +++VAGGHD+ KNA  +A                                     
Sbjct: 198 SVSPTKVYVAGGHDDQKNALRSAEVYDVEKDEWSSVTPMTEGRDECQGFAVGMGLRFCVL 257

Query: 254 XXXXTENQGNFERTAEVYETKTGKWRRVESAW-CEERSPR 269
               TE+QG F    E+Y+  T  W R+++ W   + SPR
Sbjct: 258 SGYGTESQGRFRSDGEIYDPATDSWSRIDNVWRFPDTSPR 295

[Close]

BLAST of CsaV3_7G005560 vs. Swiss-Prot
Match: sp|Q9M8L2|FBK30_ARATH (F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g80440 PE=2 SV=1)

HSP 1 Score: 136.0 bits (341), Expect = 7.7e-31
Identity = 80/243 (32.92%), Postives = 114/243 (46.91%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIP LP+++A ECL RS +    V A V R W+R      F + RK S  + + +   Q
Sbjct: 2   ELIPNLPDDVARECLLRSSYQQFPVIASVCRAWNREVSLSQFLHQRKASRHSQELLILSQ 61

Query: 74  SLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLAVIG 133
           + + P       A P  + +S  +  +G WT + PI     GLPLFCR++ V   L V+G
Sbjct: 62  ARVDPAGSGKIIATP-EYRISVLESGSGLWTELPPIPGQTKGLPLFCRLVSVGSDLIVLG 121

Query: 134 GWDPVSYRPVEDVFVYEFAAEKWRQGKGMP-EKRSFFG-ATEYGGEIFVAGGHDEGKNAA 193
           G DP++++  + VFV+ F   KWR G  MP  +RSFFG A++    + VAGGH+E K A 
Sbjct: 122 GLDPITWQAHDSVFVFSFLTSKWRVGATMPGVRRSFFGCASDSDRTVLVAGGHNEEKCAL 181

Query: 194 AXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKT 253
                                                     TE QG F +TAE ++  T
Sbjct: 182 TSAMVYDVSEDKWTFLPDMARERDECKAVFHAGRFHVIGGYATEEQGQFSKTAESFDVST 241

Query: 254 GKW 255
            +W
Sbjct: 242 WEW 243

[Close]

BLAST of CsaV3_7G005560 vs. Swiss-Prot
Match: sp|Q9M1Y1|SKI20_ARATH (F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1 SV=1)

HSP 1 Score: 123.2 bits (308), Expect = 5.1e-27
Identity = 95/324 (29.32%), Postives = 134/324 (41.36%), Query Frame = 0


Query: 5   KQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGR 64
           K++  +I  +LIPGLPEE+A+ECL R  F  H     V R W  +  SR F   R   G+
Sbjct: 5   KKKSGEIRGDLIPGLPEELAIECLVRVPFQFHSSIKSVCRSWKCVISSRSFIKERIGFGK 64

Query: 65  THKAVFAVQSLLQPVSD---------------------------EAKSAAPIAFGVSAFD 124
               +  VQ L  P S                            + +      +G+S ++
Sbjct: 65  AESLLCLVQPLTSPPSPAMMEXXXXXXXXXXXXXXXXQMTQQLLQPRITGTPLYGLSVYN 124

Query: 125 PATGNWTRIKPIEKYPNGLPLFCRIIGVD--GKLAVIGGWDPVSYRPVEDVFVYEFAA-- 184
                W R+      P  +PLFC  + +   GK+ +IGGWDP + +PV DVFV +F A  
Sbjct: 125 ATLDTWHRV----AIPERIPLFCECVAIQDAGKVLLIGGWDPETLQPVRDVFVLDFFAGE 184

Query: 185 ---EKWRQGKGMPEKRSFFGATEYGG-EIFVAGGHDEGKNA--AAXXXXXXXXXXXXXXX 244
               ++R+G+ M   RSFF     G  +++VAGGHD+ KNA  +A               
Sbjct: 185 GSGRRFRRGRPMSAARSFFACASVGSTKVYVAGGHDDQKNALRSAEVYDVEKDEWSMLPP 244

Query: 245 XXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKTGKWRRVESAW-CEERS 291
                                     TE QG F    E+Y+  T  W  +E+ W   + S
Sbjct: 245 MTEGRDECHGFSMATDPGFCVLSGYGTETQGQFRSDGEIYDPITNSWSTIENVWPFPDLS 304

[Close]

BLAST of CsaV3_7G005560 vs. Swiss-Prot
Match: sp|Q93W93|FBK22_ARATH (F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g55270 PE=2 SV=1)

HSP 1 Score: 69.7 bits (169), Expect = 6.8e-11
Identity = 47/168 (27.98%), Postives = 72/168 (42.86%), Query Frame = 0


Query: 2   RNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKL 61
           +N K+    I   L+PGLP+++A+ CL R     HR    V +RW+RL     FY+ RKL
Sbjct: 65  KNSKRERTRIQPPLLPGLPDDLAVACLIRVPRAEHRKLRLVCKRWYRLASGNFFYSQRKL 124

Query: 62  SGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPI-EKYPNGLPLFC 121
            G + + V+             K         + FDP +  W  + P+  +Y   +   C
Sbjct: 125 LGMSEEWVYVF-----------KRDRDGKISWNTFDPISQLWQPLPPVPREYSEAVGFGC 184

Query: 122 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSF 169
            ++     L + GG DP+    +  V  Y     KW +   M  KR F
Sbjct: 185 AVLS-GCHLYLFGGKDPLR-GSMRRVIFYNARTNKWHRAPDMLRKRHF 219

[Close]

BLAST of CsaV3_7G005560 vs. TrEMBL
Match: tr|A0A0A0LEY5|A0A0A0LEY5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G792070 PE=4 SV=1)

HSP 1 Score: 515.4 bits (1326), Expect = 9.4e-143
Identity = 300/301 (99.67%), Postives = 300/301 (99.67%), Query Frame = 0


Query: 1   MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK 60
           MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK
Sbjct: 1   MRNIKQRMMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRK 60

Query: 61  LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC 120
           LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC
Sbjct: 61  LSGRTHKAVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFC 120

Query: 121 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV 180
           RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV
Sbjct: 121 RIIGVDGKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFV 180

Query: 181 AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF 240
           AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF
Sbjct: 181 AGGHDEGKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNF 240

Query: 241 ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIG 300
           ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGI 
Sbjct: 241 ERTAEVYETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIV 300

Query: 301 G 302
           G
Sbjct: 301 G 301

[Close]

BLAST of CsaV3_7G005560 vs. TrEMBL
Match: tr|A0A1S3B7S9|A0A1S3B7S9_CUCME (F-box/kelch-repeat protein At2g44130-like OS=Cucumis melo OX=3656 GN=LOC103486736 PE=4 SV=1)

HSP 1 Score: 473.0 bits (1216), Expect = 5.4e-130
Identity = 279/294 (94.90%), Postives = 284/294 (96.60%), Query Frame = 0


Query: 8   MMDIGDELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHK 67
           MMD+ DELIPGLPEEIALECLTRSHFTTHR+AARVSRRW RLFLSRHFYNLRKLSGRTHK
Sbjct: 1   MMDMADELIPGLPEEIALECLTRSHFTTHRLAARVSRRWRRLFLSRHFYNLRKLSGRTHK 60

Query: 68  AVFAVQSLLQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG 127
           AVFAVQSL  PVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG
Sbjct: 61  AVFAVQSLPLPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDG 120

Query: 128 KLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG 187
           KLAVIGGWDPVSYRPVEDVFVY+FAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG
Sbjct: 121 KLAVIGGWDPVSYRPVEDVFVYDFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEG 180

Query: 188 KNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVY 247
           KNAAA XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQG+FERTAEVY
Sbjct: 181 KNAAATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGDFERTAEVY 240

Query: 248 ETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGG 302
           ETKTGKWRRVE+AWCEERSPRNVVGVGREGELFNWAT   AAKTTAV GEGI G
Sbjct: 241 ETKTGKWRRVENAWCEERSPRNVVGVGREGELFNWAT--VAAKTTAVEGEGIVG 292

[Close]

BLAST of CsaV3_7G005560 vs. TrEMBL
Match: tr|A0A2P4IYD4|A0A2P4IYD4_QUESU (F-box/kelch-repeat protein OS=Quercus suber OX=58331 GN=CFP56_42672 PE=4 SV=1)

HSP 1 Score: 289.7 bits (740), Expect = 8.4e-75
Identity = 148/305 (48.52%), Postives = 189/305 (61.97%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           EL+PGLPEE+ALECLTR H++THRVAARV RRW  L  S++FY  RK +G T KA   VQ
Sbjct: 8   ELLPGLPEELALECLTRLHYSTHRVAARVCRRWRHLLHSKNFYYHRKQTGHTIKAACLVQ 67

Query: 74  SL-LQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLAVI 133
           SL + P SDEAK   P A+GV+ FDP +GNW R+ P+ +YP+GLPLFC++   +GKL V+
Sbjct: 68  SLPVLPGSDEAKPVGPPAYGVAVFDPVSGNWDRVDPVPEYPDGLPLFCKVTSSEGKLVVM 127

Query: 134 GGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNAAA 193
           GGW+PVSY PV+DVFVYEF  ++WR+GK MPE RSFF A E GG +F+AGGHD  KNA +
Sbjct: 128 GGWNPVSYEPVKDVFVYEFTTQQWRKGKDMPENRSFFAAGESGGRVFIAGGHDVSKNALS 187

Query: 194 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKTG 253
                                                    TE+QG+FER+AEVYE  T 
Sbjct: 188 SAWVYDVREDKWAELTRMSQGRDECEGVVIGSEFWVVSGYGTESQGDFERSAEVYELGTS 247

Query: 254 KWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGGEYGGKGDCVHG 313
           +WRRVE AW   + P++ VGVG++G+LF WA + +  +  A  G  +GG     G    G
Sbjct: 248 QWRRVEEAWNVTQCPKSCVGVGKDGKLFCWAESDSEVRVGA-CGIEMGGMTFLSGSAFQG 307

Query: 314 EEWSF 318
               F
Sbjct: 308 GSQGF 311

[Close]

BLAST of CsaV3_7G005560 vs. TrEMBL
Match: tr|W9QDJ4|W9QDJ4_9ROSA (F-box/kelch-repeat protein OS=Morus notabilis OX=981085 GN=L484_014051 PE=4 SV=1)

HSP 1 Score: 277.3 bits (708), Expect = 4.3e-71
Identity = 148/312 (47.44%), Postives = 179/312 (57.37%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIPGLP+++ALECLTR HF+THRVAARVSRRW RLF SR FY  RKL+G T K    VQ
Sbjct: 7   ELIPGLPDDLALECLTRLHFSTHRVAARVSRRWRRLFQSRDFYYHRKLTGHTRKVACLVQ 66

Query: 74  SL-------LQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVD 133
            L        Q   D  K  +P A+GVS FDP +G W+R+ P+ KYP+GLPLFC++   +
Sbjct: 67  LLPAQAEAQAQSGPDRPKPTSPPAYGVSIFDPVSGLWSRVDPVPKYPDGLPLFCQVASSE 126

Query: 134 GKLAVIGGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDE 193
           GKL V+GGWDP SY PV DVFVY+F    W QG+ MPE RSFF A E  G +FVAGGHDE
Sbjct: 127 GKLVVMGGWDPTSYDPVRDVFVYDFTTLTWWQGRDMPEARSFFAAGEISGRVFVAGGHDE 186

Query: 194 GKNAAAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEV 253
            KNA +                                         TE QG FE +AE 
Sbjct: 187 SKNALSSAWAYDVAADEWAPLPRMSQERDECEGLVVRSEFWVVSGYRTETQGGFEASAEQ 246

Query: 254 YETKTGKWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTAVTGEGIGGE-YGG 313
           Y+   G+WRRVE AW   R PR+ VGVG++G LF WA +  A +  +  G  +GG  Y  
Sbjct: 247 YDADAGEWRRVEDAWGASRCPRSNVGVGKDGRLFCWADSDLAVRVGS-CGIKLGGRTYVS 306

Query: 314 KGDCVHGEEWSF 318
              C  G +  F
Sbjct: 307 GSGCQGGSQEFF 317

[Close]

BLAST of CsaV3_7G005560 vs. TrEMBL
Match: tr|A0A2I4E0A4|A0A2I4E0A4_9ROSI (F-box/kelch-repeat protein At1g15670-like OS=Juglans regia OX=51240 GN=LOC108985116 PE=4 SV=1)

HSP 1 Score: 275.0 bits (702), Expect = 2.1e-70
Identity = 135/281 (48.04%), Postives = 172/281 (61.21%), Query Frame = 0


Query: 14  ELIPGLPEEIALECLTRSHFTTHRVAARVSRRWHRLFLSRHFYNLRKLSGRTHKAVFAVQ 73
           ELIPGLPEE+ALECL+R HF+TH +AARV  RW  L  S+ FY  RK +G T KA   VQ
Sbjct: 8   ELIPGLPEELALECLSRLHFSTHGIAARVCHRWRDLLHSKDFYYHRKQTGHTRKAACLVQ 67

Query: 74  SL-LQPVSDEAKSAAPIAFGVSAFDPATGNWTRIKPIEKYPNGLPLFCRIIGVDGKLAVI 133
           SL ++  SDE K   P A+GVS FDP +G W RI P+ KYPNG PLFC++   +GKL V+
Sbjct: 68  SLPVRSGSDETKPVGPPAYGVSVFDPISGIWDRIDPVPKYPNGFPLFCQVTSSEGKLVVM 127

Query: 134 GGWDPVSYRPVEDVFVYEFAAEKWRQGKGMPEKRSFFGATEYGGEIFVAGGHDEGKNAAA 193
            GWDPVSY PV+DVFVY+F   +WR+GK MP+ RSFF A E  G +F+AGGHDE KNA +
Sbjct: 128 AGWDPVSYEPVKDVFVYDFTTRRWRKGKDMPQNRSFFAAGELDGRVFIAGGHDESKNALS 187

Query: 194 XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTENQGNFERTAEVYETKTG 253
                                                    TENQG FE +AE Y+  TG
Sbjct: 188 SAWVYDVRRDEWAELVPMSQERDECEGVVIGSEFVVVSGYRTENQGGFEESAESYDLGTG 247

Query: 254 KWRRVESAWCEERSPRNVVGVGREGELFNWATAAAAAKTTA 294
           +W+RVE AW   + P++ VGVG++G++F WA + +  +  A
Sbjct: 248 QWKRVEHAWKATQCPKSCVGVGKDGKMFCWAESNSEVRVGA 288

The following BLAST results are available for this feature:

BLAST of CsaV3_7G005560 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_004136552.2	1.4e-142	99.67	PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis sativus] >KGN59267...	[more]
XP_008443007.1	8.1e-130	94.90	PREDICTED: F-box/kelch-repeat protein At2g44130-like [Cucumis melo]	[more]
XP_022983021.1	1.6e-101	79.73	F-box/kelch-repeat protein At2g44130-like [Cucurbita maxima]	[more]
XP_022935259.1	2.1e-101	79.73	F-box/kelch-repeat protein At2g44130-like [Cucurbita moschata]	[more]
XP_023528326.1	3.0e-100	79.04	F-box/kelch-repeat protein At2g44130-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_7G005560 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G15670.1	8.6e-33	33.74	Galactose oxidase/kelch repeat superfamily protein	[more]
AT2G44130.1	1.5e-32	32.86	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G80440.1	4.3e-32	32.92	Galactose oxidase/kelch repeat superfamily protein	[more]
AT3G59940.1	2.9e-28	29.32	Galactose oxidase/kelch repeat superfamily protein	[more]
AT1G55270.1	3.7e-12	27.98	Galactose oxidase/kelch repeat superfamily protein	[more]

BLAST of CsaV3_7G005560 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9LMR5\|FK126_ARATH	1.5e-31	33.74	F-box/kelch-repeat protein At1g15670 OS=Arabidopsis thaliana OX=3702 GN=At1g1567...	[more]
sp\|O80582\|FBK46_ARATH	2.6e-31	32.86	F-box/kelch-repeat protein At2g44130 OS=Arabidopsis thaliana OX=3702 GN=At2g4413...	[more]
sp\|Q9M8L2\|FBK30_ARATH	7.7e-31	32.92	F-box/kelch-repeat protein At1g80440 OS=Arabidopsis thaliana OX=3702 GN=At1g8044...	[more]
sp\|Q9M1Y1\|SKI20_ARATH	5.1e-27	29.32	F-box/kelch-repeat protein SKIP20 OS=Arabidopsis thaliana OX=3702 GN=SKIP20 PE=1...	[more]
sp\|Q93W93\|FBK22_ARATH	6.8e-11	27.98	F-box/kelch-repeat protein At1g55270 OS=Arabidopsis thaliana OX=3702 GN=At1g5527...	[more]

BLAST of CsaV3_7G005560 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0LEY5\|A0A0A0LEY5_CUCSA	9.4e-143	99.67	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G792070 PE=4 SV=1	[more]
tr\|A0A1S3B7S9\|A0A1S3B7S9_CUCME	5.4e-130	94.90	F-box/kelch-repeat protein At2g44130-like OS=Cucumis melo OX=3656 GN=LOC10348673...	[more]
tr\|A0A2P4IYD4\|A0A2P4IYD4_QUESU	8.4e-75	48.52	F-box/kelch-repeat protein OS=Quercus suber OX=58331 GN=CFP56_42672 PE=4 SV=1	[more]
tr\|W9QDJ4\|W9QDJ4_9ROSA	4.3e-71	47.44	F-box/kelch-repeat protein OS=Morus notabilis OX=981085 GN=L484_014051 PE=4 SV=1	[more]
tr\|A0A2I4E0A4\|A0A2I4E0A4_9ROSI	2.1e-70	48.04	F-box/kelch-repeat protein At1g15670-like OS=Juglans regia OX=51240 GN=LOC108985...	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf
IPR015915	Kelch-typ_b-propeller
IPR006652	Kelch_1

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G005560.1	CsaV3_7G005560.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
IPR006652	Kelch repeat type 1	SMART	SM00612	kelc_smart	coord: 177..224 e-value: 1.1E-6 score: 38.2 coord: 128..176 e-value: 0.0011 score: 28.2
IPR006652	Kelch repeat type 1	PFAM	PF01344	Kelch_1	coord: 125..163 e-value: 2.7E-5 score: 23.5 coord: 166..211 e-value: 2.6E-11 score: 42.8 coord: 216..259 e-value: 2.4E-4 score: 20.5
IPR015915	Kelch-type beta propeller	GENE3D	G3DSA:2.120.10.80		coord: 60..285 e-value: 2.0E-40 score: 140.5
IPR015915	Kelch-type beta propeller	SUPERFAMILY	SSF117281	Kelch motif	coord: 93..261
None	No IPR available	PANTHER	PTHR24412	FAMILY NOT NAMED	coord: 13..291
None	No IPR available	PANTHER	PTHR24412:SF383	SUBFAMILY NOT NAMED	coord: 13..291
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 15..57

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G005560	CSPI03G36160	Wild cucumber (PI 183967)	cpicucB194
CsaV3_7G005560	Cucsa.242420	Cucumber (Gy14) v1	cgycucB368
CsaV3_7G005560	CmaCh14G003950	Cucurbita maxima (Rimu)	cmacucB0319
CsaV3_7G005560	CmoCh14G003960	Cucurbita moschata (Rifu)	cmocucB0314
CsaV3_7G005560	CsGy3G033600	Cucumber (Gy14) v2	cgybcucB157
CsaV3_7G005560	Carg03591	Silver-seed gourd	carcucB0283
CsaV3_7G005560	Cla017570	Watermelon (97103) v1	cucwmB603
CsaV3_7G005560	MELO3C009596	Melon (DHL92) v3.5.1	cucmeB574
CsaV3_7G005560	ClCG10G017780	Watermelon (Charleston Gray)	cucwcgB557
CsaV3_7G005560	Lsi03G017640	Bottle gourd (USVL1VR-Ls)	cuclsiB556
CsaV3_7G005560	MELO3C009596.2	Melon (DHL92) v3.6.1	cucmedB560
CsaV3_7G005560	Cla97C10G200730	Watermelon (97103) v2	cucwmbB538
CsaV3_7G005560	Bhi11G002086	Wax gourd	cucwgoB673

The following gene(s) are paralogous to this gene:


Gene	Paralogue	Organism	Block
CsaV3_7G005560	CsaV3_3G038520	Cucumber (Chinese Long) v3	cuccucB157

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G005560	Silver-seed gourd	carcucB0717
CsaV3_7G005560	Silver-seed gourd	carcucB0758
CsaV3_7G005560	Silver-seed gourd	carcucB0915
CsaV3_7G005560	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G005560	Cucumber (Gy14) v1	cgycucB226
CsaV3_7G005560	Cucurbita maxima (Rimu)	cmacucB0172
CsaV3_7G005560	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G005560	Cucurbita maxima (Rimu)	cmacucB0686
CsaV3_7G005560	Cucurbita maxima (Rimu)	cmacucB0768
CsaV3_7G005560	Cucurbita maxima (Rimu)	cmacucB1002
CsaV3_7G005560	Cucurbita moschata (Rifu)	cmocucB0155
CsaV3_7G005560	Cucurbita moschata (Rifu)	cmocucB0259
CsaV3_7G005560	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G005560	Cucurbita moschata (Rifu)	cmocucB0754
CsaV3_7G005560	Cucurbita moschata (Rifu)	cmocucB0987
CsaV3_7G005560	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G005560	Cucurbita pepo (Zucchini)	cpecucB0656
CsaV3_7G005560	Cucurbita pepo (Zucchini)	cpecucB0863
CsaV3_7G005560	Cucurbita pepo (Zucchini)	cpecucB0946
CsaV3_7G005560	Cucurbita pepo (Zucchini)	cpecucB1082
CsaV3_7G005560	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G005560	Bottle gourd (USVL1VR-Ls)	cuclsiB529
CsaV3_7G005560	Melon (DHL92) v3.5.1	cucmeB548
CsaV3_7G005560	Melon (DHL92) v3.6.1	cucmedB536
CsaV3_7G005560	Watermelon (Charleston Gray)	cucwcgB564
CsaV3_7G005560	Watermelon (Charleston Gray)	cucwcgB597
CsaV3_7G005560	Watermelon (97103) v1	cucwmB614
CsaV3_7G005560	Watermelon (97103) v1	cucwmB627
CsaV3_7G005560	Watermelon (97103) v2	cucwmbB542
CsaV3_7G005560	Watermelon (97103) v2	cucwmbB574
CsaV3_7G005560	Wax gourd	cucwgoB687
CsaV3_7G005560	Wax gourd	cucwgoB707