CsaV3_7G000240 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_7G000240
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	F-box family protein
Location	chr7 : 383639 .. 383941 (-)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideCDSexon

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGAATGAACTACCGGCGGATTGTGTTGGTTGGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCGGCGGCTGATTCAGATTTTTTGTTGAAGCTGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTAGTACATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATACAGGCACAGAAAACAACTCGGTAATCTTCTTCCTTCTTCTTCTTCTTCTTATTATATCGAGTGTTATTGGTTAG

mRNA sequence

ATGAATGAACTACCGGCGGATTGTGTTGGTTGGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCGGCGGCTGATTCAGATTTTTTGTTGAAGCTGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTAGTACATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATACAGGCACAGAAAACAACTCGGTAATCTTCTTCCTTCTTCTTCTTCTTCTTATTATATCGAGTGTTATTGGTTAG

Coding sequence (CDS)

ATGAATGAACTACCGGCGGATTGTGTTGGTTGGATTTTGGCCTTTACGTCGTTGAAAGATGTTTGTAGATTGGCTGGAGTTTCGTCAGTGTTCAGATCGGCGGCTGATTCAGATTTTTTGTTGAAGCTGAATTTTGTGCCGGTGAATTACAAAGAGATTATTATTAGTACATCATCTGCTTCCTCCTTCTGTTCGTTTCTAAATTCACTGTTGAAGAAGCCTCTCTATACAGGCACAGAAAACAACTCGGTAATCTTCTTCCTTCTTCTTCTTCTTCTTATTATATCGAGTGTTATTGGTTAG

Protein sequence

MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSASSFCSFLNSLLKKPLYTGTENNSVIFFLLLLLLIISSVIG

Homology

[Close]

BLAST of CsaV3_7G000240 vs. NCBI nr
Match: KGN43164.1 (hypothetical protein Csa_7G004170 [Cucumis sativus])

HSP 1 Score: 159.5 bits (402), Expect = 6.2e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA
Sbjct: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60

Query: 61 SSFCSFLNSLLKKPLYTGT 80
          SSFCSFLNSLLKKPLYTGT
Sbjct: 61 SSFCSFLNSLLKKPLYTGT 79

[Close]

BLAST of CsaV3_7G000240 vs. NCBI nr
Match: XP_011650883.1 (PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56751.1 hypothetical protein Csa_3G132530 [Cucumis sativus])

HSP 1 Score: 80.1 bits (196), Expect = 4.7e-12
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR A VS  FRSAADSD  L   F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSD-ALWTTFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  SFLNSL KK LY
Sbjct: 63 SSTSSFLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. NCBI nr
Match: XP_022132696.1 (putative F-box protein PP2-B12 [Momordica charantia])

HSP 1 Score: 77.4 bits (189), Expect = 3.1e-11
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          M+ LPADC+  I+AFTS KD+C  A VSS FRSAA+S+ L K  F+P +Y+EII    S+
Sbjct: 1  MDRLPADCISRIMAFTSPKDICSSAAVSSAFRSAAESNTLWK-TFLPADYREIIAQAPSS 60

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  S LNSL +K LY
Sbjct: 61 SS-SSLLNSLSEKALY 74

[Close]

BLAST of CsaV3_7G000240 vs. NCBI nr
Match: XP_004134006.2 (PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56749.1 hypothetical protein Csa_3G132020 [Cucumis sativus])

HSP 1 Score: 76.3 bits (186), Expect = 6.9e-11
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSAADSD  L + F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSD-ALWITFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  S LNSL KK LY
Sbjct: 63 SSTSSCLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. NCBI nr
Match: XP_022980373.1 (putative F-box protein PP2-B12 [Cucurbita maxima])

HSP 1 Score: 76.3 bits (186), Expect = 6.9e-11
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LP +C+  ILAFTS KD CR A VS  FRSAADS+  L   F+P +Y++ IIS +S+
Sbjct: 3  INQLPVECISSILAFTSPKDACRSAAVSLAFRSAADSE-ALWTTFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
           S  SFLNSL KK LY
Sbjct: 63 PSTTSFLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. TAIR10
Match: AT1G80110.1 (phloem protein 2-B11)

HSP 1 Score: 54.3 bits (129), Expect = 5.1e-08
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          MN LP DC+  IL+ T+  DVCRL+ VSS+FRSAA SD +   +F+P ++     + +  
Sbjct: 1  MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWN-HFLPADFPAGFAAPAGL 60

Query: 61 SSFCSFLNSLLKKPL 76
           +      SL+  PL
Sbjct: 61 PTRKQLFFSLVDNPL 74

[Close]

BLAST of CsaV3_7G000240 vs. TAIR10
Match: AT2G02340.1 (phloem protein 2-B8)

HSP 1 Score: 52.0 bits (123), Expect = 2.5e-07
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1   MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
           +++LP +CV  I++FTS +D C LA VS  F SA  SD + +  F+P  Y E +IS S A
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWE-KFIPPEY-ESLISQSRA 95

Query: 61  SSFCSFLNSLLKKPLY 77
             F S      KK LY
Sbjct: 96  FKFLS------KKELY 103

[Close]

BLAST of CsaV3_7G000240 vs. TAIR10
Match: AT1G56240.1 (phloem protein 2-B13)

HSP 1 Score: 48.5 bits (114), Expect = 2.8e-06
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEII 55
          M  LP  CV  ILAFTS  D    + VSSVFR A DSDF+ +  F+P +YK +I
Sbjct: 1  MMMLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWE-KFLPSHYKSLI 53

[Close]

BLAST of CsaV3_7G000240 vs. TAIR10
Match: AT1G56250.1 (phloem protein 2-B14)

HSP 1 Score: 48.1 bits (113), Expect = 3.6e-06
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEII 55
          M  LP  C+  ILAFTS  D    + VSSVFR A DSDF+ +  F+P +YK +I
Sbjct: 1  MMMLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWE-KFLPSDYKSLI 53

[Close]

BLAST of CsaV3_7G000240 vs. TAIR10
Match: AT2G02320.1 (phloem protein 2-B7)

HSP 1 Score: 47.0 bits (110), Expect = 8.1e-06
Identity = 22/62 (35.48%), Postives = 36/62 (58.06%), Query Frame = 0


Query: 1   MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
           + +LP +C+  I++FTS +D C  A VS  F SA  SD + +  F+P  Y+ ++  +   
Sbjct: 40  LGDLPEECISLIISFTSPRDACVFALVSKTFESAVQSDIVWE-KFIPPEYESLLSRSQHF 99

Query: 61  SS 63
           SS
Sbjct: 100 SS 100

[Close]

BLAST of CsaV3_7G000240 vs. Swiss-Prot
Match: sp|Q949S5|P2B11_ARATH (F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1)

HSP 1 Score: 54.3 bits (129), Expect = 9.1e-07
Identity = 30/75 (40.00%), Postives = 44/75 (58.67%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          MN LP DC+  IL+ T+  DVCRL+ VSS+FRSAA SD +   +F+P ++     + +  
Sbjct: 1  MNNLPEDCIAKILSLTTPLDVCRLSAVSSIFRSAAGSDDVWN-HFLPADFPAGFAAPAGL 60

Query: 61 SSFCSFLNSLLKKPL 76
           +      SL+  PL
Sbjct: 61 PTRKQLFFSLVDNPL 74

[Close]

BLAST of CsaV3_7G000240 vs. Swiss-Prot
Match: sp|Q9ZVQ8|PP2B8_ARATH (Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1)

HSP 1 Score: 52.0 bits (123), Expect = 4.5e-06
Identity = 33/76 (43.42%), Postives = 44/76 (57.89%), Query Frame = 0


Query: 1   MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
           +++LP +CV  I++FTS +D C LA VS  F SA  SD + +  F+P  Y E +IS S A
Sbjct: 36  LDDLPEECVSIIVSFTSPQDACVLASVSKTFASAVKSDIVWE-KFIPPEY-ESLISQSRA 95

Query: 61  SSFCSFLNSLLKKPLY 77
             F S      KK LY
Sbjct: 96  FKFLS------KKELY 103

[Close]

BLAST of CsaV3_7G000240 vs. Swiss-Prot
Match: sp|Q9FV02|SKIP3_ARATH (F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2)

HSP 1 Score: 49.3 bits (116), Expect = 2.9e-05
Identity = 27/75 (36.00%), Postives = 41/75 (54.67%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          ++ LP  C+  I++FTS +D C  A VS +F SA  SD + +  F+P +Y+ +I  +   
Sbjct: 24 LDSLPEGCISNIISFTSPEDACVAAAVSKIFESAVKSDIVWE-KFLPTDYESLITPSRVF 83

Query: 61 SSFCSFLNSLLKKPL 76
          SS      SL   PL
Sbjct: 84 SSKKELYFSLCNDPL 97

[Close]

BLAST of CsaV3_7G000240 vs. Swiss-Prot
Match: sp|Q9C7J9|P2B13_ARATH (F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1)

HSP 1 Score: 48.5 bits (114), Expect = 5.0e-05
Identity = 28/54 (51.85%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEII 55
          M  LP  CV  ILAFTS  D    + VSSVFR A DSDF+ +  F+P +YK +I
Sbjct: 1  MMMLPEACVANILAFTSPADAFSSSEVSSVFRLAGDSDFVWE-KFLPSHYKSLI 53

[Close]

BLAST of CsaV3_7G000240 vs. Swiss-Prot
Match: sp|Q9C7K0|VBF_ARATH (F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1)

HSP 1 Score: 48.1 bits (113), Expect = 6.5e-05
Identity = 27/54 (50.00%), Postives = 34/54 (62.96%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEII 55
          M  LP  C+  ILAFTS  D    + VSSVFR A DSDF+ +  F+P +YK +I
Sbjct: 1  MMMLPEACIANILAFTSPADAFSSSEVSSVFRLAGDSDFVWE-KFLPSDYKSLI 53

[Close]

BLAST of CsaV3_7G000240 vs. TrEMBL
Match: tr|A0A0A0K2B9|A0A0A0K2B9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004170 PE=4 SV=1)

HSP 1 Score: 159.5 bits (402), Expect = 4.1e-36
Identity = 79/79 (100.00%), Postives = 79/79 (100.00%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA
Sbjct: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60

Query: 61 SSFCSFLNSLLKKPLYTGT 80
          SSFCSFLNSLLKKPLYTGT
Sbjct: 61 SSFCSFLNSLLKKPLYTGT 79

[Close]

BLAST of CsaV3_7G000240 vs. TrEMBL
Match: tr|A0A0A0L9G5|A0A0A0L9G5_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1)

HSP 1 Score: 80.1 bits (196), Expect = 3.1e-12
Identity = 46/76 (60.53%), Postives = 56/76 (73.68%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR A VS  FRSAADSD  L   F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECLSCILAFTSPKDACRSAVVSPAFRSAADSD-ALWTTFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  SFLNSL KK LY
Sbjct: 63 SSTSSFLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. TrEMBL
Match: tr|A0A0A0L6T0|A0A0A0L6T0_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1)

HSP 1 Score: 76.3 bits (186), Expect = 4.5e-11
Identity = 44/76 (57.89%), Postives = 55/76 (72.37%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSAADSD  L + F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECLSSILAFTSPKDACRSAVASPAFRSAADSD-ALWITFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  S LNSL KK LY
Sbjct: 63 SSTSSCLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. TrEMBL
Match: tr|A0A0A0L445|A0A0A0L445_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1)

HSP 1 Score: 75.5 bits (184), Expect = 7.7e-11
Identity = 43/76 (56.58%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR A  S  FRSAADSD  +   F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECISSILAFTSPKDACRSAVASPAFRSAADSD-AIWTTFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  S LNSL KK LY
Sbjct: 63 SSTSSVLNSLSKKALY 76

[Close]

BLAST of CsaV3_7G000240 vs. TrEMBL
Match: tr|A0A1S3AW73|A0A1S3AW73_CUCME (putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103483492 PE=4 SV=1)

HSP 1 Score: 72.8 bits (177), Expect = 5.0e-10
Identity = 42/76 (55.26%), Postives = 54/76 (71.05%), Query Frame = 0


Query: 1  MNELPADCVGWILAFTSLKDVCRLAGVSSVFRSAADSDFLLKLNFVPVNYKEIIISTSSA 60
          +N+LPA+C+  ILAFTS KD CR   VS  F+ AADSD  L   F+P +Y++ IIS +S+
Sbjct: 3  INQLPAECISSILAFTSPKDACRSPVVSPTFKYAADSD-ALWTTFLPSDYRQ-IISQASS 62

Query: 61 SSFCSFLNSLLKKPLY 77
          SS  SFL+SL KK LY
Sbjct: 63 SSTSSFLDSLPKKDLY 76

The following BLAST results are available for this feature:

BLAST of CsaV3_7G000240 vs. NCBI nr


Match Name	E-value	Identity	Description
KGN43164.1	6.2e-36	100.00	hypothetical protein Csa_7G004170 [Cucumis sativus]	[more]
XP_011650883.1	4.7e-12	60.53	PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56751.1 hypothet...	[more]
XP_022132696.1	3.1e-11	56.58	putative F-box protein PP2-B12 [Momordica charantia]	[more]
XP_004134006.2	6.9e-11	57.89	PREDICTED: putative F-box protein PP2-B12 [Cucumis sativus] >KGN56749.1 hypothet...	[more]
XP_022980373.1	6.9e-11	56.58	putative F-box protein PP2-B12 [Cucurbita maxima]	[more]

BLAST of CsaV3_7G000240 vs. TAIR10


Match Name	E-value	Identity	Description
AT1G80110.1	5.1e-08	40.00	phloem protein 2-B11	[more]
AT2G02340.1	2.5e-07	43.42	phloem protein 2-B8	[more]
AT1G56240.1	2.8e-06	51.85	phloem protein 2-B13	[more]
AT1G56250.1	3.6e-06	50.00	phloem protein 2-B14	[more]
AT2G02320.1	8.1e-06	35.48	phloem protein 2-B7	[more]

BLAST of CsaV3_7G000240 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q949S5\|P2B11_ARATH	9.1e-07	40.00	F-box protein PP2-B11 OS=Arabidopsis thaliana OX=3702 GN=PP2B11 PE=1 SV=1	[more]
sp\|Q9ZVQ8\|PP2B8_ARATH	4.5e-06	43.42	Putative F-box protein PP2-B8 OS=Arabidopsis thaliana OX=3702 GN=PP2B8 PE=4 SV=1	[more]
sp\|Q9FV02\|SKIP3_ARATH	2.9e-05	36.00	F-box protein SKIP3 OS=Arabidopsis thaliana OX=3702 GN=SKIP3 PE=1 SV=2	[more]
sp\|Q9C7J9\|P2B13_ARATH	5.0e-05	51.85	F-box protein PP2-B13 OS=Arabidopsis thaliana OX=3702 GN=PP2B13 PE=2 SV=1	[more]
sp\|Q9C7K0\|VBF_ARATH	6.5e-05	50.00	F-box protein VBF OS=Arabidopsis thaliana OX=3702 GN=VBF PE=1 SV=1	[more]

BLAST of CsaV3_7G000240 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A0A0K2B9\|A0A0A0K2B9_CUCSA	4.1e-36	100.00	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_7G004170 PE=4 SV=1	[more]
tr\|A0A0A0L9G5\|A0A0A0L9G5_CUCSA	3.1e-12	60.53	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132530 PE=4 SV=1	[more]
tr\|A0A0A0L6T0\|A0A0A0L6T0_CUCSA	4.5e-11	57.89	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132020 PE=4 SV=1	[more]
tr\|A0A0A0L445\|A0A0A0L445_CUCSA	7.7e-11	56.58	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_3G132520 PE=4 SV=1	[more]
tr\|A0A1S3AW73\|A0A1S3AW73_CUCME	5.0e-10	55.26	putative F-box protein PP2-B12 OS=Cucumis melo OX=3656 GN=LOC103483492 PE=4 SV=1	[more]

Annotated Terms

The following terms have been associated with this gene:

Vocabulary: **Molecular Function**
Term	Definition
GO:0005515	protein binding

Vocabulary: **INTERPRO**
Term	Definition
IPR036047	F-box-like_dom_sf

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
molecular_function	GO:0005515	protein binding

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_7G000240.1	CsaV3_7G000240.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR32278	FAMILY NOT NAMED	coord: 1..64
None	No IPR available	PANTHER	PTHR32278:SF15	F-BOX PROTEIN PP2-B13-RELATED	coord: 1..64
IPR036047	F-box-like domain superfamily	SUPERFAMILY	SSF81383	F-box domain	coord: 2..43

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_7G000240	MELO3C029048.2	Melon (DHL92) v3.6.1	cucmedB537

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_7G000240	Silver-seed gourd	carcucB0201
CsaV3_7G000240	Silver-seed gourd	carcucB0347
CsaV3_7G000240	Silver-seed gourd	carcucB1026
CsaV3_7G000240	Cucumber (Gy14) v2	cgybcucB093
CsaV3_7G000240	Cucumber (Gy14) v2	cgybcucB095
CsaV3_7G000240	Cucumber (Gy14) v2	cgybcucB348
CsaV3_7G000240	Cucumber (Gy14) v1	cgycucB141
CsaV3_7G000240	Cucumber (Gy14) v1	cgycucB257
CsaV3_7G000240	Cucumber (Gy14) v1	cgycucB572
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0177
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0231
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0638
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0689
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0769
CsaV3_7G000240	Cucurbita maxima (Rimu)	cmacucB0958
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0161
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0219
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0622
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0674
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0757
CsaV3_7G000240	Cucurbita moschata (Rifu)	cmocucB0948
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB0139
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB0322
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB0371
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB0869
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB0947
CsaV3_7G000240	Cucurbita pepo (Zucchini)	cpecucB1042
CsaV3_7G000240	Wild cucumber (PI 183967)	cpicucB118
CsaV3_7G000240	Wild cucumber (PI 183967)	cpicucB119
CsaV3_7G000240	Wild cucumber (PI 183967)	cpicucB415
CsaV3_7G000240	Bottle gourd (USVL1VR-Ls)	cuclsiB524
CsaV3_7G000240	Bottle gourd (USVL1VR-Ls)	cuclsiB529
CsaV3_7G000240	Bottle gourd (USVL1VR-Ls)	cuclsiB570
CsaV3_7G000240	Melon (DHL92) v3.5.1	cucmeB530
CsaV3_7G000240	Melon (DHL92) v3.5.1	cucmeB549
CsaV3_7G000240	Melon (DHL92) v3.5.1	cucmeB568
CsaV3_7G000240	Melon (DHL92) v3.6.1	cucmedB518
CsaV3_7G000240	Melon (DHL92) v3.6.1	cucmedB554
CsaV3_7G000240	Watermelon (Charleston Gray)	cucwcgB558
CsaV3_7G000240	Watermelon (Charleston Gray)	cucwcgB571
CsaV3_7G000240	Watermelon (Charleston Gray)	cucwcgB599
CsaV3_7G000240	Watermelon (97103) v1	cucwmB604
CsaV3_7G000240	Watermelon (97103) v1	cucwmB634
CsaV3_7G000240	Watermelon (97103) v1	cucwmB640
CsaV3_7G000240	Watermelon (97103) v2	cucwmbB539
CsaV3_7G000240	Watermelon (97103) v2	cucwmbB549
CsaV3_7G000240	Watermelon (97103) v2	cucwmbB578
CsaV3_7G000240	Wax gourd	cucwgoB691
CsaV3_7G000240	Wax gourd	cucwgoB692
CsaV3_7G000240	Wax gourd	cucwgoB701
CsaV3_7G000240	Wax gourd	cucwgoB706
CsaV3_7G000240	Cucumber (Chinese Long) v3	cuccucB098
CsaV3_7G000240	Cucumber (Chinese Long) v3	cuccucB101