CsaV3_6G016110 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.TTATTCCAAATATTTTTTCCTTCCTCTCTAAATTTTTCCTCTTCCTCTTTCCTTTCCTCTTCCTTCATCTTTCCTTTCCTCTTCCTTCATATTTCCTCTTCCTTCATCTAGTTTTTTCTCTCTTCATCTTTCCTCTTTCTAACCCATTCTTCATCCCAACTTCATCTTTCCTTTCCCCCTCTTCATCTTTTCTCTTCCTATTTCATTCTCCCTTCCAACTTCAAATTTTCTCTTCCCCTCTTCTCTTTTCCTCTCATCCATTTTTCCTTTCAAATTTTCTCTTCCTCTCTTCACTTTTCCTCTTCTATTTCGTCATAAAGGTATGTTTTTCTATAAATCGTGGATGGGGTATACGATTTTGTTGTTAAAATTATTTTATTTTATTATTATGTTGATAAAATAATTTATTTTTTGTTGTAGGCTTCTCCTATCTTCCATTGTCTCCCATCCTCCATTGTCTCATTCATCTTCACAAGGTATGTTTATTCTAACCCTAATTTTATTTAGATTTGTTATTTTATTTTCTTATTTTGTGGAAAAAAATTGTTTGAATTTAGTTATGTTTTTTTGAATTTAGTTATGTGTTTGAATTTAGTTATGTGTTTGAATTTAGTTATGTGTTTGAATTTAGTTATGTGTTTGAATTTAGTTTTGTGTTTGAATTTAGTTTTGTGTTTGAATTTAGTTTTGTCTTTGAATTTAGTTTTGTCTTTGAATTTAGTTATGTCTTTGAATTTAGTTATGTCTTTGAATTTAGTTATGTCTTTGAATTTAGTTATGTCTTTGAATTTAGTTATATCTTTGAATTTAGTTATATCTTTGAATTTAGTTATATCTTTTGAATTTTGTTATATTCCTTGAATTTTGTTATATTTTTTTTGAATTTTGTTATTTTTAACTTTATTAATAATAATAATAATAATAAAATTATTATTATTATTAAAAATAATAATAATAATAATAATAAAAAATAAAAATAATTCTGATTTGACTAATAATAATAATGATTTGACTAATAATAAAAAAATAATAGTAAAAATAATAATGATTTGACTAATAATAATAATAAAATTTAATAATAAAATTATTATTATTATTATTATTAAAAATAATAATTATTAATAAAAATCAAAACCTATAAATGTACTTTTTTTTCTTTCTTGATTTGACTAATAATAATAATAATAAACATAATAAAATAATAAAAATAATCCTGATTTGACTAATAATAATAATGATTTGACTAATAATAAAAAAATTATAATAAAAATAATAATAGTTTGACTAATGATAATAATAATAATAATAATAATAATAATAATAATAATAATTATAATAATAATAATAATAATAAGAATAATAATAAAAACAATAATAATAAGAATAATAAGAAAATAATAATAATAATAATTATTATTATTATTATTAGGGTTATTATTAAAAAAATATAATTATTAATAAAAATCTAAAAGGAAAACTAATTAATGCACCGTTACCTTAGTGTACTCTTTTTTTGTTTTTTTAATTTTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAGTAGTAGTGATAATAATAATAATAATAATCATAATAATCATAAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAGTAGTAGTGATAATAATAATAATAATAATCATAATAATCATAATAATACTAGTGATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATATCAATATCGATAGTGATAATAATAATGATGATAATCCTAATAATAATAATAATAATAATAATAATAATAATAATAGTAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATAATATATAATAATAAAATAATAATCAATCCAAAAGTAAACCATATGTTACTGTGTACACTTTATTGTGTACACTACATTACTAATAAAATAAATAGATACATTAAACTGATGATCGTTTTTGTATTTAACAGCTAATTAAATATGTCGTTGCGACCTGAAGATTTAGTTATTCTTGAACCTGGTAATGATGGAGATAGTGATATAGATGTAGAAGTCGATGAACTATTTGGTAATGAAGAAAATATAGAGGAAGAGAATGAAATGATCCCGTCCGATATATTTACACAAATAGATTGGGACATTGCGAATTCTGTTTGTGAACAAGGTTGTACATTGCGAATACGTTAATGATCGATATGGTATTTGTTTGATCTCTGACAGACATAGGGGCATTCTTTCTGCCATTAACAATGAAGAGGTAGGTTGGAGTGAACCTTGAGCTGTCCATCGATATTGTCTTCGTCATGTTGCTAGCAACTTCAATCAGAAATATAAATCAAAGCAACTGAAAGACTTGGTGTTTAGGGCAGGTAATCAACACCAAAGGCGTAAATTTATAAAAATAATGAAAGAACTACAACGATTGAACCCAGAGTGTCTTGAGTTTTTTGAAGATATTGACGTGGAAAAATGGACTCAGTCACATGACAATGAGTCTCGATATGGGTGGATGACAAGCAATGCAGCTGAATGTATGAACGGTGTATTTAAAGGAGCTCGAATGTTACCCATGACTTCTTTGGTTAGACTAGCATTTTATCGCACAATCCTTTATTTCGAACGTCGGCGAGCTGAGATAAGTGAAGCACTCGATTGTGGTGATATTTATACGGAATATGCGATAAGAAAGCTTAAGAAGTGGGAAAAACGAGCTTCTGCACATTCAATGACATCCATTGATAGAGAAACCCAGACATTTGAGGTTCATACGGGTATGAGTATGATTTCTCCATACAAAGGCCAACACACATAGGTAGTAAGTTTGATGGAAGGGACATGTTCTTGCAATAAGTGGCAGTCGTTTAAGATTCCGTGTTCGCATGTAATTGCAGTTTGTAATTACATGCACTTGACATACGTACCATACATTGATGAATGCTACTTGTTGTCGACATTCAAACGTTGTTATGACGGTCGCTTCCAATCCAACACTCAGATTAGATGGAGCGGCGTTATACCATTGTCAGAACTGTCTGCAAATATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGGTAGTAAAATATTATACCAATATTGCGTAGGCATGTTTTTTGTTGTTTCCTTATGTTCGTTTTTTTTAACAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCAACATCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCCGACAGTATCAGATAACTACTTTTCATGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATCGCATGGTAATAGTTTTAATATGATTTATAAATTTAATACAAGCATGAACATTTTTTAATTATATTATTTACAATCGTTCAGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAAATATAGACAGTCTTGTTCAGCGGACTCGACGTTTAAATGTTGCTGACACAGATCGTAGACGCATTCGACGGCGACGACGACAACAAGGCGATGATGTCGTAGAGGGAGATGGGGAAGCTTCTTAAGTTGTATAATTTAAGTGTTTTTAAATTTTGCTAGAACTTATTCAAGTTGTATAAATAAAAAGTTGAACTTTTCTAAATTAATTATAAATTAGAAGTTGCTAATACATGATTTAGATGTAGGAGTATTC ATGGAAGGGACATGTTCTTGCAATAAGTGGCAGTCGTTTAAGATTCCGTGTTCGCATGTAATTGCAGTTTGTAATTACATGCACTTGACATACGTACCATACATTGATGAATGCTACTTGTTGTCGACATTCAAACGTTGTTATGACGGTCGCTTCCAATCCAACACTCAGATTAGATGGAGCGGCGTTATACCATTGTCAGAACTGTCTGCAAATATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCAACATCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCCGACAGTATCAGATAACTACTTTTCATGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATCGCATGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAAATATAGACAGTCTTGTTCAGCGGACTCGACGTTTAAATGTTGCTGACACAGATCGTAGACGCATTCGACGGCGACGACGACAACAAGGCGATGATGTCGTAGAGGGAGATGGGGAAGCTTCTTAA ATGGAAGGGACATGTTCTTGCAATAAGTGGCAGTCGTTTAAGATTCCGTGTTCGCATGTAATTGCAGTTTGTAATTACATGCACTTGACATACGTACCATACATTGATGAATGCTACTTGTTGTCGACATTCAAACGTTGTTATGACGGTCGCTTCCAATCCAACACTCAGATTAGATGGAGCGGCGTTATACCATTGTCAGAACTGTCTGCAAATATGTTGATCACCTACCGAATGTTTTTTGATCGGCTGATCAACTCTCAGATTAATTGGACACCATACACGTCCCACATTATGGCATTGCTTCAACATCAATGTCATAACGGTCAAGCGATGTGGACATATGTGGGTCCTATGATTTGCTTTCATCTCGTTGAGAAGCATCAAGCAGATCGTGTATTGCGACAGTTCCATATGCTACAAATGCCACCAGAGTTTTGCTCCACAGATCAGGGCCTACACCAAATTGATTTAAGAGGCAAGCACGATCAAGATTGGAGTAGGATTCATGCAGAGCATATAGCAATGTGGCATTCACGAAATAATTTTTGTGCCGAAGCAGAAGCAACACAGAAGCCGACAGTATCAGATAACTACTTTTCATGGTACACGTCGATTACCCGACGCTTCATGACACCTGATGGCGCTTACTGTTATCGCATGAATAATTTTGTTGAAGACGTACGTCGAGTCTCCATGGAAAACAATTTTGAAATTTTTAGTCCAATGTGTGACGAAGTCATGGGAAATATAGACAGTCTTGTTCAGCGGACTCGACGTTTAAATGTTGCTGACACAGATCGTAGACGCATTCGACGGCGACGACGACAACAAGGCGATGATGTCGTAGAGGGAGATGGGGAAGCTTCTTAA MEGTCSCNKWQSFKIPCSHVIAVCNYMHLTYVPYIDECYLLSTFKRCYDGRFQSNTQIRWSGVIPLSELSANMLITYRMFFDRLINSQINWTPYTSHIMALLQHQCHNGQAMWTYVGPMICFHLVEKHQADRVLRQFHMLQMPPEFCSTDQGLHQIDLRGKHDQDWSRIHAEHIAMWHSRNNFCAEAEATQKPTVSDNYFSWYTSITRRFMTPDGAYCYRMNNFVEDVRRVSMENNFEIFSPMCDEVMGNIDSLVQRTRRLNVADTDRRRIRRRRRQQGDDVVEGDGEAS
BLAST of CsaV3_6G016110 vs. NCBI nr
Match: XP_008459571.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X2 [Cucumis melo]) HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81 Identity = 139/210 (66.19%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. NCBI nr
Match: XP_016902435.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Cucumis melo]) HSP 1 Score: 311.6 bits (797), Expect = 2.8e-81 Identity = 139/210 (66.19%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. NCBI nr
Match: XP_011656076.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis sativus]) HSP 1 Score: 197.6 bits (501), Expect = 5.9e-47 Identity = 86/121 (71.07%), Postives = 101/121 (83.47%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. NCBI nr
Match: XP_016903693.1 (PREDICTED: serine/threonine-protein phosphatase 7 long form homolog [Cucumis melo]) HSP 1 Score: 190.3 bits (482), Expect = 9.4e-45 Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. NCBI nr
Match: XP_022152173.1 (serine/threonine-protein phosphatase 7 long form homolog isoform X1 [Momordica charantia]) HSP 1 Score: 187.2 bits (474), Expect = 7.9e-44 Identity = 85/194 (43.81%), Postives = 123/194 (63.40%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TAIR10
Match: AT1G48120.1 (hydrolases;protein serine/threonine phosphatases) HSP 1 Score: 124.8 bits (312), Expect = 8.8e-29 Identity = 63/166 (37.95%), Postives = 87/166 (52.41%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TAIR10
Match: AT1G49920.1 (MuDR family transposase) HSP 1 Score: 53.1 bits (126), Expect = 3.2e-07 Identity = 22/68 (32.35%), Postives = 37/68 (54.41%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TAIR10
Match: AT1G64260.1 (MuDR family transposase) HSP 1 Score: 51.2 bits (121), Expect = 1.2e-06 Identity = 19/49 (38.78%), Postives = 30/49 (61.22%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TAIR10
Match: AT1G64255.1 (MuDR family transposase) HSP 1 Score: 50.4 bits (119), Expect = 2.1e-06 Identity = 18/45 (40.00%), Postives = 27/45 (60.00%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. Swiss-Prot
Match: sp|Q9LNG5|PPP7L_ARATH (Serine/threonine-protein phosphatase 7 long form homolog OS=Arabidopsis thaliana OX=3702 GN=MAIL3 PE=2 SV=1) HSP 1 Score: 124.8 bits (312), Expect = 1.6e-27 Identity = 63/166 (37.95%), Postives = 87/166 (52.41%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TrEMBL
Match: tr|A0A1S4E383|A0A1S4E383_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X1 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81 Identity = 139/210 (66.19%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TrEMBL
Match: tr|A0A1S3CBQ7|A0A1S3CBQ7_CUCME (serine/threonine-protein phosphatase 7 long form homolog isoform X2 OS=Cucumis melo OX=3656 GN=LOC103498663 PE=4 SV=1) HSP 1 Score: 311.6 bits (797), Expect = 1.8e-81 Identity = 139/210 (66.19%), Postives = 168/210 (80.00%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TrEMBL
Match: tr|A0A1S4E636|A0A1S4E636_CUCME (serine/threonine-protein phosphatase 7 long form homolog OS=Cucumis melo OX=3656 GN=LOC107992364 PE=4 SV=1) HSP 1 Score: 190.3 bits (482), Expect = 6.2e-45 Identity = 88/136 (64.71%), Postives = 106/136 (77.94%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TrEMBL
Match: tr|E5GC81|E5GC81_CUCME (Uncharacterized protein OS=Cucumis melo subsp. melo OX=412675 PE=4 SV=1) HSP 1 Score: 152.9 bits (385), Expect = 1.1e-33 Identity = 66/95 (69.47%), Postives = 77/95 (81.05%), Query Frame = 0
BLAST of CsaV3_6G016110 vs. TrEMBL
Match: tr|A0A2N9HYE0|A0A2N9HYE0_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS46809 PE=4 SV=1) HSP 1 Score: 143.7 bits (361), Expect = 6.7e-31 Identity = 75/192 (39.06%), Postives = 107/192 (55.73%), Query Frame = 0
The following BLAST results are available for this feature:
The following terms have been associated with this gene:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene: |