CsaV3_6G009340 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.AAAAACATGAAATAAGATCTGTTATCAAACGAAACCTAAGTCTTCATCTTTAAACCTATAATAATGAGGAGCAGGGATAATCCTAGTTTGTAAGAAGAAAAACTCCCAGGTGGCAGGGAGGTGGTGTGGCCCAGTCCAAGGAGGATTAAGCCAACTTGTTTCATCTCTCTGAATTCTGAGGTGCAAAACGATTTCAATTCTTAATTACATAAATGGCCACTCTGTTCAACAATTCGGCACCGGCAGTGACAAGAAGCGGTGACCGCGTTTATGTGGCGGCTGTGCCACTAAGAGCAACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCAGCTTACTCTTTCAACTTCTGGGATTTCCAGCATTTCATGGTTATCATTTCACCACCATCCTCCCCAACTTCTCACTCTCGGGTTCTCTTCTTTTCCAATTGCATTCTCCTTTATCCTTTCTTACCCACCTCTAATTTATGGGGTTCATTCAAGGGCTTCTGCCTACACACACACACACACACACACCTTGGGGCATCTCCAATTTCTATTCAAATTTACTGCTTAATTGGGTGGATTGACTGGCGTTTCTTGTTGTTAGAGATGATTTCAGGCATTAGTTTTTGATTTTCAACCTAAGGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAACCAGTTCCAGGTCCGGTGTACTACTCTTTTAACTTACGCTCATTGGATGCTTTTCGTTTAAATCTAAATGATGGGTTTTCATTTTCCTTTAACAGTGTTCAAACTGATGAATGAATGCTCATTGCACCCCATTGCCTTCTTAAATTTGACATATGTCTGTGAGAGAGGTTAAGAAATTGACAATCAAGATAAACAGTATCAAGTAAACAAAAGAGAATCTACCTAAGGATTTTGTGATTCACTAAAAGTAGTGTGTTTGTTAGTTAGCTCCATTGCTTAAAAGAGCAATTTATTATATAAGAAAATATTAGATTACCAACTCTAGAGTTGAGAGTTATTTAGCAAACTCCTCCAAATTTGAAGTTCAAAATCGTAAATATCATAAACAACACAAATACAAATGCAACTTAGTCAATGAGGCTCGTGTTTGGTGATGTGGAGCGGGAATTCTAACAAGATGAATGAAATAGTACATATTTGCGTTTATCTTCTGTGAAGCTTATGTTGACGTGCAATTGGGATTACTGTTCATTTGTCTTTGTATTTTACAAAGGAAGTGAAATTATTCTAAATAATGAATGATTTGTTAATCGAAAACAAACTAAAAGAAGCTGCCAAATGGTGGCTGATTGGTGAGAGTTTTTACAACATGGATAAATTACTTCATGAGTCTGAGATCGTGCAAATTAAATCTTCATTCTAACTTTTCTCTAAGCTCTAATACTCTTTTTACTAGTACTACACAACTGATTTATTGAAAGCTCAAATTTTCCCTTCTCATGTTCCTGGAACTGAAAACCAATTTGTGCACGTTTAATAGATTTAGTGATTTGGTGTCAGGAGTTGTTCGTGAACGGAAGTTGTCAAGACTGCCAAAGAACAAATGTTCATATGTCGGATATTCAAATGTGAATGCCGTAGAAGTAGCACGTAAGTTCAACGAAACTTGGGATACTAATTTGAGGATTGGTCATCATGACTGCAGAGACTATACAAATGGTTGGTAACATAGCAGCAGTTATTTTTGTCAATCTTCATTCATTCTGAATCATCTTGAAAATTGAAATGTGAATATTTGTTGTTGCTTTTCTGTGTTGTTTGGGAAGGCTTGGTTGAGGTTCTGCTTGGTGAAGAAAATGTATTGGAGCGGCTAAGGCAGAATTCATTAAACATTTAATAATTTACAATTCATGAACTTATGAGTTTAGTGTCAGTTGGTGTACACTGAATTGTTGCTTTTCTGGGACAATATGTAACGTTATCACTGCTCTGAATTTGTAAATTTTTCTAATATTAAAAATATAGTAACATATTGCACCACCCA ATGGCCACTCTGTTCAACAATTCGGCACCGGCAGTGACAAGAAGCGGTGACCGCGTTTATGTGGCGGCTGTGCCACTAAGAGCAACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCAGCTTACTCTTTCAACTTCTGGGATTTCCAGCATTTCATGGTTATCATTTCACCACCATCCTCCCCAACTTCTCACTCTCGGGCATTAGTTTTTGATTTTCAACCTAAGGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAACCAGTTCCAGGAGTTGTTCGTGAACGGAAGTTGTCAAGACTGCCAAAGAACAAATGTTCATATGTCGGATATTCAAATGTGAATGCCGTAGAAGTAGCACGTAAGTTCAACGAAACTTGGGATACTAATTTGAGGATTGGTCATCATGACTGCAGAGACTATACAAATGGCTTGGTTGAGGTTCTGCTTGGTGAAGAAAATGTATTGGAGCGGCTAAGGCAGAATTCATTAAACATTTAA ATGGCCACTCTGTTCAACAATTCGGCACCGGCAGTGACAAGAAGCGGTGACCGCGTTTATGTGGCGGCTGTGCCACTAAGAGCAACAAAAGGCCCTGCCCAACTGCTTGCTTCTGCAGCTTACTCTTTCAACTTCTGGGATTTCCAGCATTTCATGGTTATCATTTCACCACCATCCTCCCCAACTTCTCACTCTCGGGCATTAGTTTTTGATTTTCAACCTAAGGATCCGGAAGATATACAAGTGGCACTGGCTGCTCTTTCTGGAAAACCAGTTCCAGGAGTTGTTCGTGAACGGAAGTTGTCAAGACTGCCAAAGAACAAATGTTCATATGTCGGATATTCAAATGTGAATGCCGTAGAAGTAGCACGTAAGTTCAACGAAACTTGGGATACTAATTTGAGGATTGGTCATCATGACTGCAGAGACTATACAAATGGCTTGGTTGAGGTTCTGCTTGGTGAAGAAAATGTATTGGAGCGGCTAAGGCAGAATTCATTAAACATTTAA MATLFNNSAPAVTRSGDRVYVAAVPLRATKGPAQLLASAAYSFNFWDFQHFMVIISPPSSPTSHSRALVFDFQPKDPEDIQVALAALSGKPVPGVVRERKLSRLPKNKCSYVGYSNVNAVEVARKFNETWDTNLRIGHHDCRDYTNGLVEVLLGEENVLERLRQNSLNI
BLAST of CsaV3_6G009340 vs. NCBI nr
Match: XP_011656874.1 (PREDICTED: uncharacterized protein LOC101213272 [Cucumis sativus] >KGN46584.1 hypothetical protein Csa_6G109790 [Cucumis sativus]) HSP 1 Score: 343.2 bits (879), Expect = 5.1e-91 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. NCBI nr
Match: XP_008455964.1 (PREDICTED: uncharacterized protein LOC103496028 [Cucumis melo]) HSP 1 Score: 324.3 bits (830), Expect = 2.4e-85 Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. NCBI nr
Match: XP_022948039.1 (uncharacterized protein LOC111451737 [Cucurbita moschata]) HSP 1 Score: 279.6 bits (714), Expect = 6.9e-72 Identity = 144/169 (85.21%), Postives = 150/169 (88.76%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. NCBI nr
Match: XP_023534339.1 (uncharacterized protein LOC111795930 [Cucurbita pepo subsp. pepo]) HSP 1 Score: 278.1 bits (710), Expect = 2.0e-71 Identity = 143/169 (84.62%), Postives = 149/169 (88.17%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. NCBI nr
Match: XP_022971116.1 (uncharacterized protein LOC111469884 [Cucurbita maxima]) HSP 1 Score: 274.6 bits (701), Expect = 2.2e-70 Identity = 142/169 (84.02%), Postives = 148/169 (87.57%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TAIR10
Match: AT2G04790.2 (unknown protein) HSP 1 Score: 169.9 bits (429), Expect = 1.4e-42 Identity = 86/163 (52.76%), Postives = 115/163 (70.55%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TrEMBL
Match: tr|A0A0A0KCM9|A0A0A0KCM9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G109790 PE=4 SV=1) HSP 1 Score: 343.2 bits (879), Expect = 3.3e-91 Identity = 169/169 (100.00%), Postives = 169/169 (100.00%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TrEMBL
Match: tr|A0A1S3C2U2|A0A1S3C2U2_CUCME (uncharacterized protein LOC103496028 OS=Cucumis melo OX=3656 GN=LOC103496028 PE=4 SV=1) HSP 1 Score: 324.3 bits (830), Expect = 1.6e-85 Identity = 159/169 (94.08%), Postives = 164/169 (97.04%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TrEMBL
Match: tr|M5XG96|M5XG96_PRUPE (Uncharacterized protein OS=Prunus persica OX=3760 GN=PRUPE_3G204800 PE=4 SV=1) HSP 1 Score: 224.2 bits (570), Expect = 2.3e-55 Identity = 107/156 (68.59%), Postives = 127/156 (81.41%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TrEMBL
Match: tr|A0A2P2J9M1|A0A2P2J9M1_RHIMU (Uncharacterized protein OS=Rhizophora mucronata OX=61149 PE=4 SV=1) HSP 1 Score: 218.8 bits (556), Expect = 9.5e-54 Identity = 108/166 (65.06%), Postives = 134/166 (80.72%), Query Frame = 0
BLAST of CsaV3_6G009340 vs. TrEMBL
Match: tr|V7BDG1|V7BDG1_PHAVU (Uncharacterized protein OS=Phaseolus vulgaris OX=3885 GN=PHAVU_008G287400g PE=4 SV=1) HSP 1 Score: 215.3 bits (547), Expect = 1.1e-52 Identity = 113/163 (69.33%), Postives = 129/163 (79.14%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene:
The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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