CsaV3_6G008750 (gene) Cucumber (Chinese Long) v3
The following sequences are available for this feature:
Legend: exonpolypeptideCDS Hold the cursor over a type above to highlight its positions in the sequence below.CTAAATTTAGCTTTACTAAATCCCTACCTATAAAAAGGGGTTTCTCATCCTTCAAAAACTTCATCCTCTCTCAGAATTTTCATCCTCTCTAAGAATTAATAATCAATAAGACACCAAAGGCCAAAAATTTTCAAGAGGAAAAAGATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGGTACGTATTACCATCTTTATAATAAGCGTTCTCTGTAATTTTTGCATGAATTATGTTAATTTATGATCATAGAAAAAAAACCATGTATCAAAATTTTTCATTAGACCACCAAAAAAGAACCACATATAACAAAAATATAAACTAAAATTGTGAATCTAAATACTTGTACGCATTTTTTATTCTTAAATTTTTGGATAAAGTATTATTTATTATATTAATTTTGATTGTTGTTTTTTGTTTTTTTACAGATAAATTGCACATCGAATTGCACTGAATGATGGAGAGCAAAAAGAAAAAACACCTCTTGAGAAGGATCAAGTACTAAAATTGTATTGAAATCGAGCTTGTACTTTGATTTTAATATTGAAATTTATAAAATTTTTGGTTTTTGGTGACATTGATATGTGAATCAACCATTGAAACTAATTAACATATATGGGGATCGACACATTCTATAAATCTTATATACAATGAGAAGATACTACAGGGCGCAATTCAAAAAGACAAAATATAATTATAATTATAATTTACTACATAATGATCAACACTAATACCGATTTACATTTTTGTTCAATATATCTTTATTAATCTCAC ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA ATGGCCAAGAAAATGATGGCAGTCTTTTTGATGTGCATCGTGGTGGTAGCTACTTTGCAATTTGTCATGGCCAATGAGGAGGATGGAGTGACCAAATATGAGGCCAAATTTGATGCCAAATACAAGTCTTGCTATGAAACTTGTGAGAAGGAATGCCTTAGAAATGACACTAACGGTGAAAGCTTTTGTGAAGTTAAATGTGATGAAGATTGTAGCGAAAAGGAAGCTGCTGATAAATTGCACATCGAATTGCACTGA MAKKMMAVFLMCIVVVATLQFVMANEEDGVTKYEAKFDAKYKSCYETCEKECLRNDTNGESFCEVKCDEDCSEKEAADKLHIELH
BLAST of CsaV3_6G008750 vs. NCBI nr
Match: KGN46520.1 (hypothetical protein Csa_6G106720 [Cucumis sativus]) HSP 1 Score: 73.2 bits (178), Expect = 4.9e-10 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008750 vs. NCBI nr
Match: XP_008459802.1 (PREDICTED: major pollen allergen Ole e 6-like [Cucumis melo]) HSP 1 Score: 53.5 bits (127), Expect = 4.1e-04 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
BLAST of CsaV3_6G008750 vs. TrEMBL
Match: tr|A0A0A0K9Z9|A0A0A0K9Z9_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_6G106720 PE=4 SV=1) HSP 1 Score: 73.2 bits (178), Expect = 3.3e-10 Identity = 85/85 (100.00%), Postives = 85/85 (100.00%), Query Frame = 0
BLAST of CsaV3_6G008750 vs. TrEMBL
Match: tr|A0A1S3CAJ3|A0A1S3CAJ3_CUCME (major pollen allergen Ole e 6-like OS=Cucumis melo OX=3656 GN=LOC103498825 PE=4 SV=1) HSP 1 Score: 53.5 bits (127), Expect = 2.7e-04 Identity = 28/34 (82.35%), Postives = 29/34 (85.29%), Query Frame = 0
The following BLAST results are available for this feature:
GO Assignments
This gene is annotated with the following GO terms.
The following mRNA feature(s) are a part of this gene:
Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04
The following gene(s) are orthologous to this gene: None The following gene(s) are paralogous to this gene: None The following block(s) are covering this gene:
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