CsaV3_5G020480 (gene) Cucumber (Chinese Long) v3 | Cucurbit Genomics Database (CuGenDB)

Overview


Name	CsaV3_5G020480
Type	gene
Organism	Cucumis sativus (Cucumber (Chinese Long) v3)
Description	GPI-anchored protein
Location	chr5 : 15367684 .. 15370255 (+)

Genome Viewer

Gene Expression

Sequences

The following sequences are available for this feature:

Gene sequence (with intron)

Legend: polypeptideexonCDS

Hold the cursor over a type above to highlight its positions in the sequence below.

ATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCGTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTGAACTTTTTTTCCCACATACTCTCTCTCTTTCCCTTTCTGCGTACCATTGCATTAAATTGTTTTGTTATGTTTTAAGTGTCATTAAAAGATTGGAAATGTTCTACTTTCCTTTCTGTATCTTAGAGTTATCAGAATATTATAGGAAGATGTGCTAATCTGCTGAACTGCTAGAATTAACCATGATGAGAATTTGTTATTGGGGTTGTTTCTAATTGAAGGAATATCTCAAAGGGAAAACAAAACTATATTTGGAAATGGGCCACATGCTTTTTATATTAAGTGTAATTTGCCCCACTACCATCACCCCTTTTAGGTTGTCTTTCATGTCAGTTCAATCTAGTGAACTAGTTTCAAAGTTCTGAGTATAAATTCTTCATAATAATGGAATTTTGGTTAAACTTTTGATGAGGATTATAGATATTCACTGATATACTGAGAATATAATTTGTTGATGGCATATTGGTGGCCTCTGAAACTTGATGAAGTTCAAGATGTGCGTATGTCTTATTTTAACTAATATATTCCATAACCCAAAAACTATGTGAAAATGAACGTTCTTACTACTTGGGTGATTTAACACATAAGTTTTTAAGCTTGAATGAATGTACAAGAAAGTGTTCATACAATGAACATTGAAATTGTGTTATTTTGATGATGTGTATTATTTAACAGCTGAAATGTTTCTTATTTGTTGTTGAAGGACCCTTCTAACAAAAGGAGAATAATTTGTGAGGAGAAGTTAAAAGAACTTTTTGATGTTGATTCCTTTAATGGACTCACTGTTTTGAAACTCCTAACCACACATTTTATAAAGATGAAATAGTAAGTTTCTCCTACACATTGTCTTTGTTGATGCAAGATAATCTAGAATTTATTGTATGCTCAAGTTGTAATCTCCTACACTTGTGTTGAAAGTTGATATTTAAAGTGTCAACATTGATCATTTTTATAAATTTTATGTTTGGTTTTGAGTTAGAAAGACATACTTAGCCATTTTCTAAGTAGTTTTAATATTTAAGACACTTAGTAGGTGGGTTTTTGTTGGTTTTAGTTTGAAAGTTACAATTAGTAGTTTTAACTTGTTTGAAAGATACACTTAGTTAAGTGTTGCTAGATTTATTTTTGAGGTTTTGTAATGGTTTAAATTGCTGACCAAGTTGAGATAATCCTATAGGTTCGAAAACTTCAAAGAGCATGCTTAAAGAATCCTGTTAAGGTATGATTGTGACTATCTAAGATCTTGTGCTACCTACACTTTTCTGATTATAAAAGCAAATTCACCAACAATTTTAATTGGATTACTTGGAAGTTGGAACCATAGGCCTAAAATTTTGATTGAGAAGCTCTATGTACTATATATCTCTCTTATGTCGATACATTCACTGACCTTTACCTTTGTTTTGCTTTCATCTTGTCTGTTACAGGCTGCAACCAACACAGTCGAATATGATAATTTCCAGGTACTTGATTAATATTTCATTGAATCTACTTGTGTGGTTGTGTTTTTAATTGTATGGAATGGTCTTACGAACTATTTTGCATGGTTGGAGCTCTTTTCTCGTGGGCTTGTTTTTTGTATGCCCATTTATTCTTTCATTTTTGTTCAATAAGAAGTTTTTGTTTAGAGGAAAGGTATGAAATGGTCTTGAATATTCAATCTTATGGCAGTATCTTTTCTATGTTCTATGTACTTCATTTAATGTTGCGGGTTATCCATAAACCACTGAGAGCAAAACTCCATCTCCTGGTTTTCAAAAAGAAAACATGGGTGTTCAATTGTTTTTGGTTAAGTGTGTAACTTCACGGCTTCTCTCTATTGATTTAGTTTGTAAACTTCAATCTTATGGCAGTATCTTTCACAAGCATTGCATGCTATTTTATTTTAGTCAGTATAGTGAATCCATTTCTTTATGTCAATTTTTGTCTGTTATATGTTTGGAATATGTTGAAAAGAATAAATAGTACCCTAAATTTATCTTTTTGAACTTAACCTTTTCGTTGATATTTTAATGAACATTTATAATTTCACCAAGCGTTGGACATTTTATTGGTACTTAATTTTTTATTTTTATTTTTACAGACTCTGGCCTTATGTGTTTGA

mRNA sequence

ATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCGTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTTCGAAAACTTCAAAGAGCATGCTTAAAGAATCCTGTTAAGGCTGCAACCAACACAGTCGAATATGATAATTTCCAGACTCTGGCCTTATGTGTTTGA

Coding sequence (CDS)

ATGGGATTAAGACGGCTTGTGGTCCTTCAAAAGGGGGTGTCTCCGGGCAGCTCCATCGTAGCCGGTGCTGTCCGGTTTTGGCTGCGTGGCTTTACGCTGCTTACTCAGCCACCGCATTGCAGAGGGCCGGTCGAGGTGGGGTTGTTCCCGGTCACACAGCGCCGTCGTATGACCTACCCTTACTGCCCGATGACTCCGAAACTTGCGTCAGTAAACTTGGATCAAGCTTTGAATCAAAGGGGTATTGAGTTAATGAAGCCTAACGAGACTTGTGATGTGGTTTATTGTTATTGTGGGATCAGATTGCATCCTTTGAGCTGCCCTGAAGCGTTTTCACTGAACCAGAATGGTATTCTTGAAGGAAATAGAAATGTGAAGAGATTGGAGAGAAATTGCTTGAGTAGTGGCAATGTCAATGGATTTCCAGGCCTTGGTGGCTGTTCTAAATGCTTGAAAAGTCTTTATCAGGTTCGAAAACTTCAAAGAGCATGCTTAAAGAATCCTGTTAAGGCTGCAACCAACACAGTCGAATATGATAATTTCCAGACTCTGGCCTTATGTGTTTGA

Protein sequence

MGLRRLVVLQKGVSPGSSIVAGAVRFWLRGFTLLTQPPHCRGPVEVGLFPVTQRRRMTYPYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAATNTVEYDNFQTLALCV

Homology

[Close]

BLAST of CsaV3_5G020480 vs. NCBI nr
Match: XP_011649105.1 (PREDICTED: LOW QUALITY PROTEIN: uncharacterized GPI-anchored protein At4g28100 [Cucumis sativus])

HSP 1 Score: 191.0 bits (484), Expect = 3.6e-45
Identity = 90/114 (78.95%), Postives = 93/114 (81.58%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAAT 174
           EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ+ K +      P    T
Sbjct: 186 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNKKETLNSSKPENRTT 239

[Close]

BLAST of CsaV3_5G020480 vs. NCBI nr
Match: XP_008453468.1 (PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo])

HSP 1 Score: 189.1 bits (479), Expect = 1.4e-44
Identity = 89/114 (78.07%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAAT 174
           EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ+   +      P    T
Sbjct: 186 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 239

[Close]

BLAST of CsaV3_5G020480 vs. NCBI nr
Match: XP_023005177.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima])

HSP 1 Score: 186.0 bits (471), Expect = 1.1e-43
Identity = 87/114 (76.32%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFS+NQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSVNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAAT 174
           EG+RNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ+   +      P    T
Sbjct: 186 EGDRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 239

[Close]

BLAST of CsaV3_5G020480 vs. NCBI nr
Match: XP_022933713.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata])

HSP 1 Score: 184.9 bits (468), Expect = 2.6e-43
Identity = 88/118 (74.58%), Postives = 95/118 (80.51%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFS+NQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSVNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAATNTVE 178
           EG+RNVKRLERNCLS+GNVNGFPGLGGCSKCLKSLYQ+   +     N  KA   T +
Sbjct: 186 EGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQLNNKETL---NSSKAENRTTK 240

[Close]

BLAST of CsaV3_5G020480 vs. NCBI nr
Match: XP_023531799.1 (uncharacterized GPI-anchored protein At4g28100-like [Cucurbita pepo subsp. pepo])

HSP 1 Score: 184.1 bits (466), Expect = 4.4e-43
Identity = 84/98 (85.71%), Postives = 89/98 (90.82%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFS+NQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSVNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQV 158
           EG+RNVKRLERNCLS+GNVNGFPGLGGCSKCLKSLYQ+
Sbjct: 186 EGDRNVKRLERNCLSNGNVNGFPGLGGCSKCLKSLYQL 223

[Close]

BLAST of CsaV3_5G020480 vs. TAIR10
Match: AT3G18050.1 (unknown protein)

HSP 1 Score: 124.4 bits (311), Expect = 7.5e-29
Identity = 61/117 (52.14%), Postives = 75/117 (64.10%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +     L ++L QRGIEL +PNETCDVVYCYCGIRLHPLSC EAF +N  G L
Sbjct: 124 PLLPDDSETCVDGLGKSLRQRGIELTRPNETCDVVYCYCGIRLHPLSCSEAFRVNDEGRL 183

Query: 120 EGNRNVKRLERNCLSS--GNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAATN 175
            G+  V RLE +CLS    N +GF  L GC+KCL SLY++   + +  +NP K   N
Sbjct: 184 VGDERVDRLETDCLSGSHNNADGFSPLLGCNKCLNSLYKLNPKKTSGTRNPSKEDRN 240

[Close]

BLAST of CsaV3_5G020480 vs. TAIR10
Match: AT4G28100.1 (unknown protein)

HSP 1 Score: 61.6 bits (148), Expect = 5.9e-10
Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 73  LDQALNQRGIELMKPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKR 132
           L  AL  + I++ +PN +CD + C+CGIRLH    LSCP AF+++ +G         VK 
Sbjct: 118 LQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVS-SGFKNATPTAAVKN 177

Query: 133 LERNCLSSGNVNGFPGLGGCSKCLKSLYQVR 159
           LE+ C +S          GC++CL +L +++
Sbjct: 178 LEKECRNS-------SYSGCTRCLGALQKLK 200

[Close]

BLAST of CsaV3_5G020480 vs. Swiss-Prot
Match: sp|Q9SUC9|UGPI7_ARATH (Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 GN=At4g28100 PE=2 SV=1)

HSP 1 Score: 61.6 bits (148), Expect = 1.1e-08
Identity = 33/91 (36.26%), Postives = 52/91 (57.14%), Query Frame = 0


Query: 73  LDQALNQRGIELMKPNETCDVVYCYCGIRLH---PLSCPEAFSLNQNGILEGNRN--VKR 132
           L  AL  + I++ +PN +CD + C+CGIRLH    LSCP AF+++ +G         VK 
Sbjct: 118 LQSALLTKQIKIPQPNSSCDAILCFCGIRLHQISSLSCPAAFNVS-SGFKNATPTAAVKN 177

Query: 133 LERNCLSSGNVNGFPGLGGCSKCLKSLYQVR 159
           LE+ C +S          GC++CL +L +++
Sbjct: 178 LEKECRNS-------SYSGCTRCLGALQKLK 200

[Close]

BLAST of CsaV3_5G020480 vs. TrEMBL
Match: tr|A0A1S3BWB4|A0A1S3BWB4_CUCME (uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103494171 PE=4 SV=1)

HSP 1 Score: 189.1 bits (479), Expect = 9.0e-45
Identity = 89/114 (78.07%), Postives = 92/114 (80.70%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    NLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL
Sbjct: 126 PLLPDDSETCVSNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 185

Query: 120 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQVRKLQRACLKNPVKAAT 174
           EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQ+   +      P    T
Sbjct: 186 EGNRNVKRLERNCLSSGNVNGFPGLGGCSKCLKSLYQLNNKETLNSSKPENRTT 239

[Close]

BLAST of CsaV3_5G020480 vs. TrEMBL
Match: tr|A0A0A0LPW7|A0A0A0LPW7_CUCSA (Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024950 PE=4 SV=1)

HSP 1 Score: 164.5 bits (415), Expect = 2.4e-37
Identity = 75/89 (84.27%), Postives = 77/89 (86.52%), Query Frame = 0


Query: 85  MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGL 144
           MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGL
Sbjct: 1   MKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGILEGNRNVKRLERNCLSSGNVNGFPGL 60

Query: 145 GGCSKCLKSLYQVRKLQRACLKNPVKAAT 174
           GGCSKCLKSLYQ+ K +      P    T
Sbjct: 61  GGCSKCLKSLYQLNKKETLNSSKPENRTT 89

[Close]

BLAST of CsaV3_5G020480 vs. TrEMBL
Match: tr|A0A2N9GYU3|A0A2N9GYU3_FAGSY (Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35329 PE=4 SV=1)

HSP 1 Score: 155.2 bits (391), Expect = 1.4e-34
Identity = 71/101 (70.30%), Postives = 84/101 (83.17%), Query Frame = 0


Query: 60  PYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGIRLHPLSCPEAFSLNQNGIL 119
           P  P   +    +L +A+ +RGIEL++PNETCD++YCYCGIRLHPLSCPEAFS+NQNG L
Sbjct: 126 PLLPDDSETCVYDLGKAVKERGIELVRPNETCDLLYCYCGIRLHPLSCPEAFSVNQNGKL 185

Query: 120 EGNRNVKRLERNCLSSG-NVNGFPGLGGCSKCLKSLYQVRK 160
            G+ NVKRLER+CLSS  NVNGFPGLGGCSKCLKSLYQ+ K
Sbjct: 186 VGDENVKRLERDCLSSSTNVNGFPGLGGCSKCLKSLYQLNK 226

[Close]

BLAST of CsaV3_5G020480 vs. TrEMBL
Match: tr|V4TWD7|V4TWD7_9ROSI (Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008811mg PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.3e-34
Identity = 75/120 (62.50%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 41  RGPVEVGLFPVTQRRRMTYPYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGI 100
           R   E    P T  R +  P  P   +    +L +A+ QRGI+L +PNETCDVVYCYCGI
Sbjct: 121 RAATETAKTPAT--RSVDLPLLPDDSETCVDDLGKAMKQRGIDLPRPNETCDVVYCYCGI 180

Query: 101 RLHPLSCPEAFSLNQNGILEGNRNVKRLERNCL-SSGNVNGFPGLGGCSKCLKSLYQVRK 160
           RLHPL+CPEAFSLN  G L GN NVKRLER+CL SS NVNGFPGLGGC+KCL SLYQ+ K
Sbjct: 181 RLHPLTCPEAFSLNPRGKLVGNVNVKRLERHCLSSSNNVNGFPGLGGCNKCLNSLYQLNK 238

[Close]

BLAST of CsaV3_5G020480 vs. TrEMBL
Match: tr|A0A2H5QPY9|A0A2H5QPY9_CITUN (Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_250710 PE=4 SV=1)

HSP 1 Score: 152.5 bits (384), Expect = 9.3e-34
Identity = 75/120 (62.50%), Postives = 86/120 (71.67%), Query Frame = 0


Query: 41  RGPVEVGLFPVTQRRRMTYPYCPMTPKLASVNLDQALNQRGIELMKPNETCDVVYCYCGI 100
           R   E    P T  R +  P  P   +    +L +A+ QRGI+L +PNETCDVVYCYCGI
Sbjct: 121 RAATETAKTPAT--RSVDLPLLPDDSETCVDDLGKAMKQRGIDLPRPNETCDVVYCYCGI 180

Query: 101 RLHPLSCPEAFSLNQNGILEGNRNVKRLERNCL-SSGNVNGFPGLGGCSKCLKSLYQVRK 160
           RLHPL+CPEAFSLN  G L GN NVKRLER+CL SS NVNGFPGLGGC+KCL SLYQ+ K
Sbjct: 181 RLHPLTCPEAFSLNPRGKLVGNVNVKRLERHCLSSSNNVNGFPGLGGCNKCLNSLYQLNK 238

The following BLAST results are available for this feature:

BLAST of CsaV3_5G020480 vs. NCBI nr


Match Name	E-value	Identity	Description
XP_011649105.1	3.6e-45	78.95	PREDICTED: LOW QUALITY PROTEIN: uncharacterized GPI-anchored protein At4g28100 [...	[more]
XP_008453468.1	1.4e-44	78.07	PREDICTED: uncharacterized GPI-anchored protein At4g28100 [Cucumis melo]	[more]
XP_023005177.1	1.1e-43	76.32	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita maxima]	[more]
XP_022933713.1	2.6e-43	74.58	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita moschata]	[more]
XP_023531799.1	4.4e-43	85.71	uncharacterized GPI-anchored protein At4g28100-like [Cucurbita pepo subsp. pepo]	[more]

BLAST of CsaV3_5G020480 vs. TAIR10


Match Name	E-value	Identity	Description
AT3G18050.1	7.5e-29	52.14	unknown protein	[more]
AT4G28100.1	5.9e-10	36.26	unknown protein	[more]

BLAST of CsaV3_5G020480 vs. Swiss-Prot


Match Name	E-value	Identity	Description
sp\|Q9SUC9\|UGPI7_ARATH	1.1e-08	36.26	Uncharacterized GPI-anchored protein At4g28100 OS=Arabidopsis thaliana OX=3702 G...	[more]

BLAST of CsaV3_5G020480 vs. TrEMBL


Match Name	E-value	Identity	Description
tr\|A0A1S3BWB4\|A0A1S3BWB4_CUCME	9.0e-45	78.07	uncharacterized GPI-anchored protein At4g28100 OS=Cucumis melo OX=3656 GN=LOC103...	[more]
tr\|A0A0A0LPW7\|A0A0A0LPW7_CUCSA	2.4e-37	84.27	Uncharacterized protein OS=Cucumis sativus OX=3659 GN=Csa_1G024950 PE=4 SV=1	[more]
tr\|A0A2N9GYU3\|A0A2N9GYU3_FAGSY	1.4e-34	70.30	Uncharacterized protein OS=Fagus sylvatica OX=28930 GN=FSB_LOCUS35329 PE=4 SV=1	[more]
tr\|V4TWD7\|V4TWD7_9ROSI	9.3e-34	62.50	Uncharacterized protein OS=Citrus clementina OX=85681 GN=CICLE_v10008811mg PE=4 ...	[more]
tr\|A0A2H5QPY9\|A0A2H5QPY9_CITUN	9.3e-34	62.50	Uncharacterized protein OS=Citrus unshiu OX=55188 GN=CUMW_250710 PE=4 SV=1	[more]

GO Annotation

GO Assignments

This gene is annotated with the following GO terms.

Category	Term Accession	Term Name
biological_process	GO:0008150	biological_process
cellular_component	GO:0005575	cellular_component
cellular_component	GO:0016021	integral component of membrane
molecular_function	GO:0003674	molecular_function

Relationships

The following mRNA feature(s) are a part of this gene:


Feature Name	Unique Name	Type
CsaV3_5G020480.1	CsaV3_5G020480.1	mRNA

InterPro

Analysis Name: InterPro Annotations of cucumber chineselong genome (v3)
Date Performed: 2019-03-04


IPR Term	IPR Description	Source	Source Term	Source Description	Alignment
None	No IPR available	PANTHER	PTHR34056:SF1	SUBFAMILY NOT NAMED	coord: 71..162
None	No IPR available	PANTHER	PTHR34056	FAMILY NOT NAMED	coord: 71..162

Synteny

The following gene(s) are orthologous to this gene:


Gene	Orthologue	Organism	Block
CsaV3_5G020480	CsGy5G013510	Cucumber (Gy14) v2	cgybcucB232

The following gene(s) are paralogous to this gene:

None

The following block(s) are covering this gene:


Gene	Organism	Block
CsaV3_5G020480	Cucurbita maxima (Rimu)	cmacucB0358
CsaV3_5G020480	Cucurbita maxima (Rimu)	cmacucB0868
CsaV3_5G020480	Cucurbita moschata (Rifu)	cmocucB0353
CsaV3_5G020480	Cucurbita moschata (Rifu)	cmocucB0854
CsaV3_5G020480	Cucurbita pepo (Zucchini)	cpecucB0215
CsaV3_5G020480	Cucurbita pepo (Zucchini)	cpecucB0525
CsaV3_5G020480	Wild cucumber (PI 183967)	cpicucB284
CsaV3_5G020480	Bottle gourd (USVL1VR-Ls)	cuclsiB348
CsaV3_5G020480	Melon (DHL92) v3.5.1	cucmeB352
CsaV3_5G020480	Watermelon (Charleston Gray)	cucwcgB388
CsaV3_5G020480	Melon (DHL92) v3.6.1	cucmedB344
CsaV3_5G020480	Watermelon (97103) v1	cucwmB437
CsaV3_5G020480	Watermelon (97103) v2	cucwmbB354
CsaV3_5G020480	Wax gourd	cucwgoB452
CsaV3_5G020480	Silver-seed gourd	carcucB0565
CsaV3_5G020480	Silver-seed gourd	carcucB0868